Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
2025-02-17 17:57:18 (127371): Detected: vboxwrapper 26206
2025-02-17 17:57:18 (127371): Detected: BOINC client v7.24.1
2025-02-17 17:57:19 (127371): Detected: VirtualBox VboxManage Interface (Version: 7.0.16)
2025-02-17 17:57:19 (127371): Successfully copied 'init_data.xml' to the shared directory.
2025-02-17 17:57:19 (127371): Create VM. (boinc_d89df594b7424c1a, slot#0)
2025-02-17 17:57:19 (127371): Setting Memory Size for VM. (4800MB)
2025-02-17 17:57:19 (127371): Setting CPU Count for VM. (8)
2025-02-17 17:57:19 (127371): Setting Chipset Options for VM.
2025-02-17 17:57:19 (127371): Setting Graphics Controller Options for VM.
2025-02-17 17:57:19 (127371): Setting Boot Options for VM.
2025-02-17 17:57:19 (127371): Setting Network Configuration for NAT.
2025-02-17 17:57:19 (127371): Enabling VM Network Access.
2025-02-17 17:57:19 (127371): Disabling USB Support for VM.
2025-02-17 17:57:19 (127371): Disabling COM Port Support for VM.
2025-02-17 17:57:19 (127371): Disabling LPT Port Support for VM.
2025-02-17 17:57:19 (127371): Disabling Audio Support for VM.
2025-02-17 17:57:19 (127371): Disabling Clipboard Support for VM.
2025-02-17 17:57:19 (127371): Disabling Drag and Drop Support for VM.
2025-02-17 17:57:19 (127371): Adding storage controller(s) to VM.
2025-02-17 17:57:19 (127371): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-02-17 17:57:21 (127371): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-02-17 17:57:21 (127371): forwarding host port 52069 to guest port 80
2025-02-17 17:57:21 (127371): Enabling remote desktop for VM.
2025-02-17 17:57:21 (127371): Required extension pack not installed, remote desktop not enabled.
2025-02-17 17:57:21 (127371): Enabling shared directory for VM.
2025-02-17 17:57:21 (127371): Starting VM using VBoxManage interface. (boinc_d89df594b7424c1a, slot#0)
2025-02-17 17:57:22 (127371): Successfully started VM. (PID = '127835')
2025-02-17 17:57:22 (127371): Reporting VM Process ID to BOINC.
2025-02-17 17:57:22 (127371): Guest Log: BIOS: VirtualBox 7.0.16
2025-02-17 17:57:22 (127371): Guest Log: CPUID EDX: 0x178bfbff
2025-02-17 17:57:22 (127371): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-02-17 17:57:22 (127371): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-02-17 17:57:22 (127371): VM state change detected. (old = 'poweredoff', new = 'running')
2025-02-17 17:57:22 (127371): Detected: Web Application Enabled (http://localhost:52069)
2025-02-17 17:57:22 (127371): Preference change detected
2025-02-17 17:57:22 (127371): Setting CPU throttle for VM. (60%)
2025-02-17 17:57:22 (127371): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-02-17 17:57:24 (127371): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-02-17 17:57:24 (127371): Guest Log: BIOS: Booting from Hard Disk...
2025-02-17 17:57:28 (127371): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-02-17 17:57:28 (127371): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-02-17 17:57:28 (127371): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-02-17 17:57:28 (127371): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-02-17 17:57:28 (127371): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-02-17 17:57:28 (127371): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-02-17 17:57:28 (127371): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-02-17 17:57:28 (127371): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-02-17 17:57:28 (127371): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-02-17 17:57:28 (127371): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-02-17 17:57:28 (127371): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-02-17 17:57:28 (127371): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-02-17 17:57:28 (127371): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-02-17 17:57:28 (127371): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-02-17 17:57:28 (127371): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-02-17 17:57:28 (127371): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-02-17 17:57:28 (127371): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-02-17 17:57:28 (127371): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-02-17 17:57:28 (127371): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-02-17 17:57:28 (127371): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-02-17 17:57:28 (127371): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-02-17 17:57:28 (127371): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-02-17 17:57:28 (127371): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-02-17 17:57:28 (127371): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-02-17 17:57:28 (127371): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-02-17 17:57:28 (127371): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-02-17 17:57:28 (127371): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-02-17 17:57:28 (127371): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-02-17 17:57:28 (127371): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-02-17 17:57:28 (127371): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-02-17 17:57:28 (127371): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-02-17 17:57:28 (127371): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-02-17 17:57:33 (127371): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-02-17 17:57:33 (127371): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-02-17 17:57:37 (127371): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-02-17 17:57:37 (127371): Guest Log: 00:00:00.000063 main     Log opened 2025-02-18T00:57:36.014046000Z
2025-02-17 17:57:37 (127371): Guest Log: 00:00:00.000117 main     OS Product: Linux
2025-02-17 17:57:37 (127371): Guest Log: 00:00:00.000127 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-02-17 17:57:37 (127371): Guest Log: 00:00:00.000134 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-02-17 17:57:37 (127371): Guest Log: 00:00:00.000142 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-02-17 17:57:37 (127371): Guest Log: 00:00:00.000142 main     Process ID: 1360
2025-02-17 17:57:37 (127371): Guest Log: 00:00:00.000142 main     Package type: LINUX_64BITS_GENERIC
2025-02-17 17:57:37 (127371): Guest Log: 00:00:00.000481 main     5.2.32 r132073 started. Verbose level = 0
2025-02-17 17:57:37 (127371): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-02-17 17:57:37 (127371): Guest Log: [INFO] Mounting shared directory
2025-02-17 17:57:37 (127371): Guest Log: [INFO] Checking for init_data.xml
2025-02-17 17:57:40 (127371): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-02-17 17:57:40 (127371): Guest Log: [INFO] Detected branch: prod
2025-02-17 17:57:42 (127371): Guest Log: This is the prod version of the ATLAS job wrapper
2025-02-17 17:57:42 (127371): Guest Log: Copying input files
2025-02-17 17:57:42 (127371): Guest Log: Copied input files into RunAtlas.
2025-02-17 17:57:42 (127371): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-02-17 17:57:42 (127371): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-02-17 17:57:42 (127371): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-02-17 17:57:42 (127371): Guest Log: Further information can be found at the LHC@home message board.
2025-02-17 17:57:50 (127371): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-02-17 17:57:50 (127371): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-02-17 17:57:50 (127371): Guest Log: 2.6.3.0 1637 0 30168 142768 4 1 3117296 4096000 0 65024 0 0 n/a 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-02-17 17:57:52 (127371): Guest Log: copied the webapp to /var/www
2025-02-17 17:57:52 (127371): Guest Log: ATHENA_PROC_NUMBER=8
2025-02-17 17:57:52 (127371): Guest Log: ATHENA_CORE_NUMBER=8
2025-02-17 17:57:52 (127371): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-02-17 17:57:52 (127371): Guest Log:  *** Starting ATLAS job. (PandaID=6517004205 taskID=43205075) ***
2025-02-17 18:58:08 (127371): VM state change detected. (old = 'running', new = 'paused')
2025-02-17 22:27:02 (127371): VM state change detected. (old = 'paused', new = 'running')
2025-02-17 22:27:06 (127371): Guest Log: 01:06:16.324764 timesync vgsvcTimeSyncWorker: Radical host time change: 12 542 491 000 000ns (HostNow=1 739 856 425 315 000 000 ns HostLast=1 739 843 882 824 000 000 ns)
2025-02-17 22:27:15 (127371): Guest Log: 01:06:26.325010 timesync vgsvcTimeSyncWorker: Radical guest time change: 12 203 196 335 000ns (GuestNow=1 739 856 435 425 145 000 ns GuestLast=1 739 844 232 228 810 000 ns fSetTimeLastLoop=true )
2025-02-17 23:05:17 (127371): Status Report: Elapsed Time: '6000.000000'
2025-02-17 23:05:17 (127371): Status Report: CPU Time: '22311.610000'
2025-02-17 23:27:34 (127371): VM state change detected. (old = 'running', new = 'paused')
2025-02-18 00:08:36 (127371): VM state change detected. (old = 'paused', new = 'running')
2025-02-18 00:08:42 (127371): Guest Log: 02:12:33.083251 timesync vgsvcTimeSyncWorker: Radical host time change: 2 470 488 000 000ns (HostNow=1 739 862 522 510 000 000 ns HostLast=1 739 860 052 022 000 000 ns)
2025-02-18 00:08:51 (127371): Guest Log: 02:12:43.083785 timesync vgsvcTimeSyncWorker: Radical guest time change: 2 130 345 977 000ns (GuestNow=1 739 862 532 519 947 000 ns GuestLast=1 739 860 402 173 970 000 ns fSetTimeLastLoop=true )
2025-02-18 00:33:09 (127371): Guest Log:  *** Job finished ***
2025-02-18 00:33:09 (127371): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-02-18 00:33:09 (127371): Guest Log: 2025-02-18 07:34:58,640 | INFO     | [data] queue_monitor thread has finished
2025-02-18 00:33:09 (127371): Guest Log: 2025-02-18 07:35:04,320 | INFO     | job.realtimelogging is not enabled
2025-02-18 00:33:09 (127371): Guest Log: 2025-02-18 07:35:08,500 | INFO     | [payload] run_realtimelog thread has finished
2025-02-18 00:33:09 (127371): Guest Log: 2025-02-18 07:35:15,561 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139696888018752)>', '<ExcThread(monitor, started 139695489021696)>']
2025-02-18 00:33:09 (127371): Guest Log: 2025-02-18 07:35:16,197 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-02-18 00:33:09 (127371): Guest Log: 2025-02-18 07:35:16,197 | INFO     | [monitor] control thread has ended
2025-02-18 00:33:09 (127371): Guest Log: 2025-02-18 07:35:20,605 | INFO     | all workflow threads have been joined
2025-02-18 00:33:09 (127371): Guest Log: 2025-02-18 07:35:20,605 | INFO     | end of generic workflow (traces error code: 0)
2025-02-18 00:33:09 (127371): Guest Log: 2025-02-18 07:35:20,605 | INFO     | traces error code: 0
2025-02-18 00:33:09 (127371): Guest Log: 2025-02-18 07:35:20,605 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-02-18 00:33:09 (127371): Guest Log: 2025-02-18 07:35:20,666 [wrapper] ==== pilot stdout END ====
2025-02-18 00:33:09 (127371): Guest Log: 2025-02-18 07:35:20,669 [wrapper] ==== wrapper stdout RESUME ====
2025-02-18 00:33:09 (127371): Guest Log: 2025-02-18 07:35:20,672 [wrapper] pilotpid: 6008
2025-02-18 00:33:09 (127371): Guest Log: 2025-02-18 07:35:20,674 [wrapper] Pilot exit status: 0
2025-02-18 00:33:09 (127371): Guest Log: 2025-02-18 07:35:20,779 [wrapper] pandaids: 6517004205
2025-02-18 00:33:09 (127371): Guest Log: 2025-02-18 07:35:20,801 [wrapper] cleanup supervisor_pilot  8753 6009
2025-02-18 00:33:09 (127371): Guest Log: 2025-02-18 07:35:20,804 [wrapper] Test setup, not cleaning
2025-02-18 00:33:09 (127371): Guest Log: 2025-02-18 07:35:20,809 [wrapper] apfmon messages muted
2025-02-18 00:33:09 (127371): Guest Log: 2025-02-18 07:35:20,812 [wrapper] ==== wrapper stdout END ====
2025-02-18 00:33:09 (127371): Guest Log: 2025-02-18 07:35:20,815 [wrapper] ==== wrapper stderr END ====
2025-02-18 00:33:09 (127371): Guest Log:  *** Error codes and diagnostics ***
2025-02-18 00:33:09 (127371): Guest Log:     "exeErrorCode": 0,
2025-02-18 00:33:09 (127371): Guest Log:     "exeErrorDiag": "",
2025-02-18 00:33:09 (127371): Guest Log:     "pilotErrorCode": 0,
2025-02-18 00:33:09 (127371): Guest Log:     "pilotErrorDiag": "",
2025-02-18 00:33:09 (127371): Guest Log:  *** Listing of results directory ***
2025-02-18 00:33:09 (127371): Guest Log: total 326940
2025-02-18 00:33:09 (127371): Guest Log: -rw-r--r--. 1 atlas atlas    491065 Feb 17 16:59 pilot3.tar.gz
2025-02-18 00:33:09 (127371): Guest Log: -rwx------. 1 atlas atlas     35862 Feb 17 17:02 runpilot2-wrapper.sh
2025-02-18 00:33:09 (127371): Guest Log: -rw-r--r--. 1 atlas atlas      5118 Feb 17 17:02 queuedata.json
2025-02-18 00:33:09 (127371): Guest Log: -rw-r--r--. 1 atlas atlas     17569 Feb 18 00:57 start_atlas.sh
2025-02-18 00:33:09 (127371): Guest Log: -rw-r--r--. 1 atlas atlas      6907 Feb 18 00:57 init_data.xml
2025-02-18 00:33:09 (127371): Guest Log: -rw-r--r--. 1 atlas atlas    503558 Feb 18 00:57 input.tar.gz
2025-02-18 00:33:09 (127371): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb 18 00:57 EVNT.43092757._000810.pool.root.1 -> /data/./ATLAS.root_0
2025-02-18 00:33:09 (127371): Guest Log: -rw-r--r--. 1 atlas atlas      2557 Feb 18 00:57 pandaJob.out
2025-02-18 00:33:09 (127371): Guest Log: -rw-------. 1 atlas atlas       424 Feb 18 00:58 setup.sh.local
2025-02-18 00:33:09 (127371): Guest Log: -rw-------. 1 atlas atlas    986333 Feb 18 00:59 agis_schedconf.cvmfs.json
2025-02-18 00:33:09 (127371): Guest Log: drwx------. 4 atlas atlas      4096 Feb 18 00:59 pilot3
2025-02-18 00:33:09 (127371): Guest Log: -rw-------. 1 atlas atlas 329053409 Feb 18 07:33 HITS.43205075._039196.pool.root.1
2025-02-18 00:33:09 (127371): Guest Log: -rw-------. 1 atlas atlas        98 Feb 18 07:34 pilot_heartbeat.json
2025-02-18 00:33:09 (127371): Guest Log: -rw-------. 1 atlas atlas      1026 Feb 18 07:34 memory_monitor_summary.json
2025-02-18 00:33:09 (127371): Guest Log: -rw-------. 1 atlas atlas   1593946 Feb 18 07:34 agis_ddmendpoints.agis.ALL.json
2025-02-18 00:33:09 (127371): Guest Log: -rw-------. 1 atlas atlas    344203 Feb 18 07:34 log.43205075._039196.job.log.tgz.1
2025-02-18 00:33:09 (127371): Guest Log: -rw-------. 1 atlas atlas      7713 Feb 18 07:34 heartbeat.json
2025-02-18 00:33:09 (127371): Guest Log: -rw-------. 1 atlas atlas      4470 Feb 18 07:35 pilotlog.txt
2025-02-18 00:33:09 (127371): Guest Log: -rw-------. 1 atlas atlas    647647 Feb 18 07:35 log.43205075._039196.job.log.1
2025-02-18 00:33:09 (127371): Guest Log: -rw-------. 1 atlas atlas       357 Feb 18 07:35 output.list
2025-02-18 00:33:09 (127371): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb 18 07:35 runtime_log
2025-02-18 00:33:09 (127371): Guest Log: -rw-------. 1 atlas atlas   1013760 Feb 18 07:35 result.tar.gz
2025-02-18 00:33:09 (127371): Guest Log: -rw-r--r--. 1 atlas atlas     10933 Feb 18 07:35 runtime_log.err
2025-02-18 00:33:09 (127371): Guest Log: -rw-------. 1 atlas atlas       656 Feb 18 07:35 FKqMDmFhJ46nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm9WkKDmvSZh4m.diag
2025-02-18 00:33:09 (127371): Guest Log: Looking for outputfile HITS.43205075._039196.pool.root.1
2025-02-18 00:33:09 (127371): Guest Log: HITS file was successfully produced
2025-02-18 00:33:09 (127371): Guest Log: -rw-------. 1 atlas atlas 329053409 Feb 18 07:33 /home/atlas/RunAtlas/HITS.43205075._039196.pool.root.1
2025-02-18 00:33:10 (127371): Guest Log: Successfully finished the ATLAS job!
2025-02-18 00:33:10 (127371): Guest Log: Copying the results back to the shared directory!
2025-02-18 00:33:10 (127371): Guest Log:  *** Contents of shared directory: ***
2025-02-18 00:33:10 (127371): Guest Log: total 339240
2025-02-18 00:33:10 (127371): Guest Log: -rw-r--r--. 1 root root 345829778 Feb 18 00:57 ATLAS.root_0
2025-02-18 00:33:10 (127371): Guest Log: -rw-r--r--. 1 root root      6907 Feb 18 00:57 init_data.xml
2025-02-18 00:33:10 (127371): Guest Log: -rw-r--r--. 1 root root    503558 Feb 18 00:57 input.tar.gz
2025-02-18 00:33:10 (127371): Guest Log: -rw-r--r--. 1 root root   1013760 Feb 18 07:33 result.tar.gz
2025-02-18 00:33:10 (127371): Guest Log: -rw-r--r--. 1 root root     17569 Feb 18 00:57 start_atlas.sh
2025-02-18 00:33:10 (127371): Guest Log:  *** Success! Shutting down the machine. ***
2025-02-18 00:33:10 (127371): VM Completion File Detected.
2025-02-18 00:33:10 (127371): Powering off VM.
2025-02-18 00:33:10 (127371): Successfully stopped VM.
2025-02-18 00:33:10 (127371): Deregistering VM. (boinc_d89df594b7424c1a, slot#0)
2025-02-18 00:33:10 (127371): Removing network bandwidth throttle group from VM.
2025-02-18 00:33:10 (127371): Removing VM from VirtualBox.
00:33:15 (127371): called boinc_finish(0)

</stderr_txt>
]]>

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