Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
2025-02-17 15:18:37 (124551): Detected: vboxwrapper 26206
2025-02-17 15:18:37 (124551): Detected: BOINC client v7.24.1
2025-02-17 15:18:37 (124551): Detected: VirtualBox VboxManage Interface (Version: 7.0.16)
2025-02-17 15:18:37 (124551): Successfully copied 'init_data.xml' to the shared directory.
2025-02-17 15:18:37 (124551): Create VM. (boinc_d7b29ff26d4d365f, slot#4)
2025-02-17 15:18:37 (124551): Setting Memory Size for VM. (4800MB)
2025-02-17 15:18:37 (124551): Setting CPU Count for VM. (8)
2025-02-17 15:18:37 (124551): Setting Chipset Options for VM.
2025-02-17 15:18:37 (124551): Setting Graphics Controller Options for VM.
2025-02-17 15:18:37 (124551): Setting Boot Options for VM.
2025-02-17 15:18:37 (124551): Setting Network Configuration for NAT.
2025-02-17 15:18:38 (124551): Enabling VM Network Access.
2025-02-17 15:18:38 (124551): Disabling USB Support for VM.
2025-02-17 15:18:38 (124551): Disabling COM Port Support for VM.
2025-02-17 15:18:38 (124551): Disabling LPT Port Support for VM.
2025-02-17 15:18:38 (124551): Disabling Audio Support for VM.
2025-02-17 15:18:38 (124551): Disabling Clipboard Support for VM.
2025-02-17 15:18:38 (124551): Disabling Drag and Drop Support for VM.
2025-02-17 15:18:38 (124551): Adding storage controller(s) to VM.
2025-02-17 15:18:38 (124551): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-02-17 15:18:39 (124551): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-02-17 15:18:39 (124551): forwarding host port 54955 to guest port 80
2025-02-17 15:18:39 (124551): Enabling remote desktop for VM.
2025-02-17 15:18:39 (124551): Required extension pack not installed, remote desktop not enabled.
2025-02-17 15:18:39 (124551): Enabling shared directory for VM.
2025-02-17 15:18:39 (124551): Starting VM using VBoxManage interface. (boinc_d7b29ff26d4d365f, slot#4)
2025-02-17 15:18:41 (124551): Successfully started VM. (PID = '125015')
2025-02-17 15:18:41 (124551): Reporting VM Process ID to BOINC.
2025-02-17 15:18:41 (124551): Guest Log: BIOS: VirtualBox 7.0.16
2025-02-17 15:18:41 (124551): Guest Log: CPUID EDX: 0x178bfbff
2025-02-17 15:18:41 (124551): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-02-17 15:18:41 (124551): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-02-17 15:18:41 (124551): VM state change detected. (old = 'poweredoff', new = 'running')
2025-02-17 15:18:41 (124551): Detected: Web Application Enabled (http://localhost:54955)
2025-02-17 15:18:41 (124551): Preference change detected
2025-02-17 15:18:41 (124551): Setting CPU throttle for VM. (60%)
2025-02-17 15:18:41 (124551): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-02-17 15:18:43 (124551): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-02-17 15:18:43 (124551): Guest Log: BIOS: Booting from Hard Disk...
2025-02-17 15:18:46 (124551): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-02-17 15:18:46 (124551): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-02-17 15:18:46 (124551): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-02-17 15:18:46 (124551): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-02-17 15:18:46 (124551): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-02-17 15:18:46 (124551): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-02-17 15:18:46 (124551): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-02-17 15:18:46 (124551): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-02-17 15:18:46 (124551): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-02-17 15:18:46 (124551): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-02-17 15:18:46 (124551): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-02-17 15:18:46 (124551): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-02-17 15:18:46 (124551): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-02-17 15:18:46 (124551): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-02-17 15:18:46 (124551): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-02-17 15:18:46 (124551): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-02-17 15:18:46 (124551): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-02-17 15:18:46 (124551): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-02-17 15:18:46 (124551): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-02-17 15:18:46 (124551): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-02-17 15:18:46 (124551): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-02-17 15:18:46 (124551): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-02-17 15:18:46 (124551): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-02-17 15:18:46 (124551): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-02-17 15:18:46 (124551): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-02-17 15:18:46 (124551): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-02-17 15:18:46 (124551): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-02-17 15:18:46 (124551): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-02-17 15:18:46 (124551): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-02-17 15:18:46 (124551): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-02-17 15:18:46 (124551): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-02-17 15:18:46 (124551): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-02-17 15:18:51 (124551): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-02-17 15:18:51 (124551): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-02-17 15:18:55 (124551): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-02-17 15:18:55 (124551): Guest Log: 00:00:00.000076 main     Log opened 2025-02-17T22:18:55.251819000Z
2025-02-17 15:18:55 (124551): Guest Log: 00:00:00.000133 main     OS Product: Linux
2025-02-17 15:18:55 (124551): Guest Log: 00:00:00.000142 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-02-17 15:18:55 (124551): Guest Log: 00:00:00.000150 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-02-17 15:18:55 (124551): Guest Log: 00:00:00.000158 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-02-17 15:18:55 (124551): Guest Log: 00:00:00.000158 main     Process ID: 1357
2025-02-17 15:18:55 (124551): Guest Log: 00:00:00.000158 main     Package type: LINUX_64BITS_GENERIC
2025-02-17 15:18:55 (124551): Guest Log: 00:00:00.000510 main     5.2.32 r132073 started. Verbose level = 0
2025-02-17 15:18:55 (124551): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-02-17 15:18:55 (124551): Guest Log: [INFO] Mounting shared directory
2025-02-17 15:18:55 (124551): Guest Log: [INFO] Checking for init_data.xml
2025-02-17 15:19:00 (124551): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-02-17 15:19:00 (124551): Guest Log: [INFO] Detected branch: prod
2025-02-17 15:19:03 (124551): Guest Log: This is the prod version of the ATLAS job wrapper
2025-02-17 15:19:03 (124551): Guest Log: Copying input files
2025-02-17 15:19:04 (124551): Guest Log: Copied input files into RunAtlas.
2025-02-17 15:19:04 (124551): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-02-17 15:19:04 (124551): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-02-17 15:19:04 (124551): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-02-17 15:19:04 (124551): Guest Log: Further information can be found at the LHC@home message board.
2025-02-17 15:19:12 (124551): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-02-17 15:19:12 (124551): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-02-17 15:19:12 (124551): Guest Log: 2.6.3.0 1637 0 30156 142763 4 1 3117296 4096000 0 65024 0 0 n/a 0 0 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-02-17 15:19:14 (124551): Guest Log: copied the webapp to /var/www
2025-02-17 15:19:14 (124551): Guest Log: ATHENA_PROC_NUMBER=8
2025-02-17 15:19:14 (124551): Guest Log: ATHENA_CORE_NUMBER=8
2025-02-17 15:19:15 (124551): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-02-17 15:19:15 (124551): Guest Log:  *** Starting ATLAS job. (PandaID=6517004117 taskID=43205075) ***
2025-02-17 16:57:42 (124551): Status Report: Elapsed Time: '6000.000000'
2025-02-17 16:57:42 (124551): Status Report: CPU Time: '20455.170000'
2025-02-17 17:57:11 (124551): Guest Log:  *** Job finished ***
2025-02-17 17:57:11 (124551): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-02-17 17:57:11 (124551): Guest Log: 2025-02-18 01:11:47,912 | INFO     | [payload] failed_post thread has finished
2025-02-17 17:57:11 (124551): Guest Log: 2025-02-18 01:11:48,380 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
2025-02-17 17:57:11 (124551): Guest Log: 2025-02-18 01:11:52,759 | INFO     | [data] queue_monitor thread has finished
2025-02-17 17:57:11 (124551): Guest Log: 2025-02-18 01:11:54,052 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140395784030016)>', '<ExcThread(monitor, started 140394754991872)>']
2025-02-17 17:57:11 (124551): Guest Log: 2025-02-18 01:11:54,757 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-02-17 17:57:11 (124551): Guest Log: 2025-02-18 01:11:54,757 | INFO     | [monitor] control thread has ended
2025-02-17 17:57:11 (124551): Guest Log: 2025-02-18 01:11:59,058 | INFO     | all workflow threads have been joined
2025-02-17 17:57:11 (124551): Guest Log: 2025-02-18 01:11:59,059 | INFO     | end of generic workflow (traces error code: 0)
2025-02-17 17:57:11 (124551): Guest Log: 2025-02-18 01:11:59,059 | INFO     | traces error code: 0
2025-02-17 17:57:11 (124551): Guest Log: 2025-02-18 01:11:59,059 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-02-17 17:57:11 (124551): Guest Log: 2025-02-18 01:11:59,099 [wrapper] ==== pilot stdout END ====
2025-02-17 17:57:11 (124551): Guest Log: 2025-02-18 01:11:59,101 [wrapper] ==== wrapper stdout RESUME ====
2025-02-17 17:57:11 (124551): Guest Log: 2025-02-18 01:11:59,103 [wrapper] pilotpid: 6031
2025-02-17 17:57:11 (124551): Guest Log: 2025-02-18 01:11:59,105 [wrapper] Pilot exit status: 0
2025-02-17 17:57:11 (124551): Guest Log: 2025-02-18 01:12:00,569 [wrapper] pandaids: 6517004117
2025-02-17 17:57:11 (124551): Guest Log: 2025-02-18 01:12:00,581 [wrapper] cleanup supervisor_pilot  9231 6032
2025-02-17 17:57:11 (124551): Guest Log: 2025-02-18 01:12:00,583 [wrapper] Test setup, not cleaning
2025-02-17 17:57:11 (124551): Guest Log: 2025-02-18 01:12:00,588 [wrapper] apfmon messages muted
2025-02-17 17:57:11 (124551): Guest Log: 2025-02-18 01:12:00,590 [wrapper] ==== wrapper stdout END ====
2025-02-17 17:57:11 (124551): Guest Log: 2025-02-18 01:12:00,592 [wrapper] ==== wrapper stderr END ====
2025-02-17 17:57:11 (124551): Guest Log:  *** Error codes and diagnostics ***
2025-02-17 17:57:11 (124551): Guest Log:     "exeErrorCode": 0,
2025-02-17 17:57:11 (124551): Guest Log:     "exeErrorDiag": "",
2025-02-17 17:57:11 (124551): Guest Log:     "pilotErrorCode": 0,
2025-02-17 17:57:11 (124551): Guest Log:     "pilotErrorDiag": "",
2025-02-17 17:57:11 (124551): Guest Log:  *** Listing of results directory ***
2025-02-17 17:57:11 (124551): Guest Log: total 328184
2025-02-17 17:57:11 (124551): Guest Log: -rw-r--r--. 1 atlas atlas      5118 Feb 17 16:58 queuedata.json
2025-02-17 17:57:11 (124551): Guest Log: -rwx------. 1 atlas atlas     35862 Feb 17 16:59 runpilot2-wrapper.sh
2025-02-17 17:57:11 (124551): Guest Log: -rw-r--r--. 1 atlas atlas    491065 Feb 17 16:59 pilot3.tar.gz
2025-02-17 17:57:11 (124551): Guest Log: -rw-r--r--. 1 atlas atlas     17569 Feb 17 22:19 start_atlas.sh
2025-02-17 17:57:11 (124551): Guest Log: -rw-r--r--. 1 atlas atlas      6907 Feb 17 22:19 init_data.xml
2025-02-17 17:57:11 (124551): Guest Log: -rw-r--r--. 1 atlas atlas    503556 Feb 17 22:19 input.tar.gz
2025-02-17 17:57:11 (124551): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb 17 22:19 EVNT.43092757._000805.pool.root.1 -> /data/./ATLAS.root_0
2025-02-17 17:57:11 (124551): Guest Log: -rw-r--r--. 1 atlas atlas      2556 Feb 17 22:19 pandaJob.out
2025-02-17 17:57:11 (124551): Guest Log: -rw-------. 1 atlas atlas       424 Feb 17 22:19 setup.sh.local
2025-02-17 17:57:11 (124551): Guest Log: -rw-------. 1 atlas atlas    986325 Feb 17 22:23 agis_schedconf.cvmfs.json
2025-02-17 17:57:11 (124551): Guest Log: -rw-------. 1 atlas atlas   1593946 Feb 17 22:23 agis_ddmendpoints.agis.ALL.json
2025-02-17 17:57:11 (124551): Guest Log: drwx------. 4 atlas atlas      4096 Feb 17 22:24 pilot3
2025-02-17 17:57:11 (124551): Guest Log: -rw-------. 1 atlas atlas 330242322 Feb 18 01:10 HITS.43205075._039108.pool.root.1
2025-02-17 17:57:11 (124551): Guest Log: -rw-------. 1 atlas atlas        95 Feb 18 01:10 pilot_heartbeat.json
2025-02-17 17:57:11 (124551): Guest Log: -rw-------. 1 atlas atlas      1026 Feb 18 01:11 memory_monitor_summary.json
2025-02-17 17:57:11 (124551): Guest Log: -rw-------. 1 atlas atlas    322917 Feb 18 01:11 log.43205075._039108.job.log.tgz.1
2025-02-17 17:57:11 (124551): Guest Log: -rw-------. 1 atlas atlas      7707 Feb 18 01:11 heartbeat.json
2025-02-17 17:57:11 (124551): Guest Log: -rw-------. 1 atlas atlas      4398 Feb 18 01:11 pilotlog.txt
2025-02-17 17:57:11 (124551): Guest Log: -rw-------. 1 atlas atlas    715776 Feb 18 01:12 log.43205075._039108.job.log.1
2025-02-17 17:57:11 (124551): Guest Log: -rw-------. 1 atlas atlas       357 Feb 18 01:12 output.list
2025-02-17 17:57:11 (124551): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb 18 01:12 runtime_log
2025-02-17 17:57:11 (124551): Guest Log: -rw-------. 1 atlas atlas   1054720 Feb 18 01:12 result.tar.gz
2025-02-17 17:57:11 (124551): Guest Log: -rw-r--r--. 1 atlas atlas     10933 Feb 18 01:12 runtime_log.err
2025-02-17 17:57:11 (124551): Guest Log: -rw-------. 1 atlas atlas       656 Feb 18 01:12 MXgNDmmdJ46nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmJWkKDmyBa1Hm.diag
2025-02-17 17:57:11 (124551): Guest Log: Looking for outputfile HITS.43205075._039108.pool.root.1
2025-02-17 17:57:11 (124551): Guest Log: HITS file was successfully produced
2025-02-17 17:57:11 (124551): Guest Log: -rw-------. 1 atlas atlas 330242322 Feb 18 01:10 /home/atlas/RunAtlas/HITS.43205075._039108.pool.root.1
2025-02-17 17:57:11 (124551): Guest Log: Successfully finished the ATLAS job!
2025-02-17 17:57:11 (124551): Guest Log: Copying the results back to the shared directory!
2025-02-17 17:57:11 (124551): Guest Log:  *** Contents of shared directory: ***
2025-02-17 17:57:11 (124551): Guest Log: total 340876
2025-02-17 17:57:11 (124551): Guest Log: -rw-r--r--. 1 root root 347466329 Feb 17 22:18 ATLAS.root_0
2025-02-17 17:57:11 (124551): Guest Log: -rw-r--r--. 1 root root      6907 Feb 17 22:18 init_data.xml
2025-02-17 17:57:11 (124551): Guest Log: -rw-r--r--. 1 root root    503556 Feb 17 22:18 input.tar.gz
2025-02-17 17:57:11 (124551): Guest Log: -rw-r--r--. 1 root root   1054720 Feb 18 00:57 result.tar.gz
2025-02-17 17:57:11 (124551): Guest Log: -rw-r--r--. 1 root root     17569 Feb 17 22:18 start_atlas.sh
2025-02-17 17:57:11 (124551): Guest Log:  *** Success! Shutting down the machine. ***
2025-02-17 17:57:11 (124551): VM Completion File Detected.
2025-02-17 17:57:11 (124551): Powering off VM.
2025-02-17 17:57:11 (124551): Successfully stopped VM.
2025-02-17 17:57:11 (124551): Deregistering VM. (boinc_d7b29ff26d4d365f, slot#4)
2025-02-17 17:57:11 (124551): Removing network bandwidth throttle group from VM.
2025-02-17 17:57:11 (124551): Removing VM from VirtualBox.
17:57:16 (124551): called boinc_finish(0)

</stderr_txt>
]]>

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