Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:23:47 (901172): wrapper (7.7.26015): starting
21:23:47 (901172): wrapper: running run_atlas (--nthreads 4)
[2025-02-21 21:23:47] Arguments: --nthreads 4
[2025-02-21 21:23:47] Threads: 4
[2025-02-21 21:23:47] Checking for CVMFS
[2025-02-21 21:23:47] No cvmfs_config command found, will try listing directly
[2025-02-21 21:23:47] CVMFS is ok
[2025-02-21 21:23:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-21 21:23:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-21 21:23:47] Further information can be found at the LHC@home message board.
[2025-02-21 21:23:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-21 21:23:47] Checking for apptainer binary...
[2025-02-21 21:23:47] which: no apptainer in ((null))
[2025-02-21 21:23:47] apptainer is not installed, using version from CVMFS
[2025-02-21 21:23:47] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-21 21:23:47] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot28/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut33.grid.cesnet.cz
[2025-02-21 21:23:47] apptainer works
[2025-02-21 21:23:47] Set ATHENA_PROC_NUMBER=4
[2025-02-21 21:23:47] Set ATHENA_CORE_NUMBER=4
[2025-02-21 21:23:47] Starting ATLAS job with PandaID=6516815346
[2025-02-21 21:23:47] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot28/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-22 06:10:23]  *** The last 200 lines of the pilot log: ***
[2025-02-22 06:10:23] 2025-02-22 05:06:04,090 | INFO     | intersect: -2952547539.564678
[2025-02-22 06:10:23] 2025-02-22 05:06:04,091 | INFO     | chi2: 1.0144768167909524
[2025-02-22 06:10:23] 2025-02-22 05:06:04,091 | INFO     | current chi2=1.0144768167909524 (change=66.96465276944551 %)
[2025-02-22 06:10:23] 2025-02-22 05:06:04,091 | INFO     | model: linear, x: [1740170072.0, 1740170133.0, 1740170194.0, 1740170255.0, 1740170316.0, 1740170377.0, 1740170438.0, 1740170499.0, 1740170560.0, 1740170621.0, 1740
[2025-02-22 06:10:23] 2025-02-22 05:06:04,092 | INFO     | sum of square deviations: 39462142692.0
[2025-02-22 06:10:23] 2025-02-22 05:06:04,099 | INFO     | sum of deviations: -9232429178.000006
[2025-02-22 06:10:23] 2025-02-22 05:06:04,099 | INFO     | mean x: 1740185383.0
[2025-02-22 06:10:23] 2025-02-22 05:06:04,099 | INFO     | mean y: 2387231.598409543
[2025-02-22 06:10:23] 2025-02-22 05:06:04,099 | INFO     | -- intersect: 409515106.801074
[2025-02-22 06:10:23] 2025-02-22 05:06:04,099 | INFO     | intersect: 409515106.801074
[2025-02-22 06:10:23] 2025-02-22 05:06:04,100 | INFO     | chi2: 0.10003087196520685
[2025-02-22 06:10:23] 2025-02-22 05:06:04,100 | INFO     | current chi2=0.10003087196520685 (change=90.13965915144026 %)
[2025-02-22 06:10:23] 2025-02-22 05:06:04,101 | INFO     | model: linear, x: [1740170377.0, 1740170438.0, 1740170499.0, 1740170560.0, 1740170621.0, 1740170682.0, 1740170743.0, 1740170804.0, 1740170865.0, 1740170926.0, 1740
[2025-02-22 06:10:23] 2025-02-22 05:06:04,101 | INFO     | sum of square deviations: 38296995264.5
[2025-02-22 06:10:23] 2025-02-22 05:06:04,108 | INFO     | sum of deviations: -13977341933.000008
[2025-02-22 06:10:23] 2025-02-22 05:06:04,109 | INFO     | mean x: 1740185535.5
[2025-02-22 06:10:23] 2025-02-22 05:06:04,109 | INFO     | mean y: 2387843.172690763
[2025-02-22 06:10:23] 2025-02-22 05:06:04,109 | INFO     | -- intersect: 637507337.2362621
[2025-02-22 06:10:23] 2025-02-22 05:06:04,109 | INFO     | intersect: 637507337.2362621
[2025-02-22 06:10:23] 2025-02-22 05:06:04,110 | INFO     | chi2: 0.0701995021631731
[2025-02-22 06:10:23] 2025-02-22 05:06:04,110 | INFO     | current chi2=0.0701995021631731 (change=29.822163114213208 %)
[2025-02-22 06:10:23] 2025-02-22 05:06:04,111 | INFO     | model: linear, x: [1740170682.0, 1740170743.0, 1740170804.0, 1740170865.0, 1740170926.0, 1740170987.0, 1740171048.0, 1740171109.0, 1740171170.0, 1740171231.0, 1740
[2025-02-22 06:10:23] 2025-02-22 05:06:04,111 | INFO     | sum of square deviations: 37155011062.0
[2025-02-22 06:10:23] 2025-02-22 05:06:04,118 | INFO     | sum of deviations: -2407626080.000004
[2025-02-22 06:10:23] 2025-02-22 05:06:04,118 | INFO     | mean x: 1740185688.0
[2025-02-22 06:10:23] 2025-02-22 05:06:04,118 | INFO     | mean y: 2386297.527383367
[2025-02-22 06:10:23] 2025-02-22 05:06:04,119 | INFO     | -- intersect: 115149457.23900972
[2025-02-22 06:10:23] 2025-02-22 05:06:04,119 | INFO     | intersect: 115149457.23900972
[2025-02-22 06:10:23] 2025-02-22 05:06:04,120 | INFO     | chi2: 0.04700054369853837
[2025-02-22 06:10:23] 2025-02-22 05:06:04,120 | INFO     | current chi2=0.04700054369853837 (change=33.04718374029294 %)
[2025-02-22 06:10:23] 2025-02-22 05:06:04,120 | INFO     | model: linear, x: [1740170987.0, 1740171048.0, 1740171109.0, 1740171170.0, 1740171231.0, 1740171292.0, 1740171353.0, 1740171414.0, 1740171475.0, 1740171536.0, 1740
[2025-02-22 06:10:23] 2025-02-22 05:06:04,121 | INFO     | sum of square deviations: 36035957522.0
[2025-02-22 06:10:23] 2025-02-22 05:06:04,128 | INFO     | sum of deviations: 7039443035.499973
[2025-02-22 06:10:23] 2025-02-22 05:06:04,128 | INFO     | mean x: 1740185840.5
[2025-02-22 06:10:23] 2025-02-22 05:06:04,128 | INFO     | mean y: 2385010.6577868853
[2025-02-22 06:10:23] 2025-02-22 05:06:04,128 | INFO     | -- intersect: -337551539.8807908
[2025-02-22 06:10:23] 2025-02-22 05:06:04,128 | INFO     | intersect: -337551539.8807908
[2025-02-22 06:10:23] 2025-02-22 05:06:04,129 | INFO     | chi2: 0.032679457345880195
[2025-02-22 06:10:23] 2025-02-22 05:06:04,129 | INFO     | current chi2=0.032679457345880195 (change=30.470044015902598 %)
[2025-02-22 06:10:23] 2025-02-22 05:06:04,130 | INFO     | model: linear, x: [1740171292.0, 1740171353.0, 1740171414.0, 1740171475.0, 1740171536.0, 1740171597.0, 1740171658.0, 1740171719.0, 1740171780.0, 1740171841.0, 1740
[2025-02-22 06:10:23] 2025-02-22 05:06:04,130 | INFO     | sum of square deviations: 34939602082.0
[2025-02-22 06:10:23] 2025-02-22 05:06:04,137 | INFO     | sum of deviations: 13297384265.999998
[2025-02-22 06:10:23] 2025-02-22 05:06:04,137 | INFO     | mean x: 1740185993.0
[2025-02-22 06:10:23] 2025-02-22 05:06:04,137 | INFO     | mean y: 2384140.2836438925
[2025-02-22 06:10:23] 2025-02-22 05:06:04,137 | INFO     | -- intersect: -659899356.5038849
[2025-02-22 06:10:23] 2025-02-22 05:06:04,138 | INFO     | intersect: -659899356.5038849
[2025-02-22 06:10:23] 2025-02-22 05:06:04,138 | INFO     | chi2: 0.025788277476230567
[2025-02-22 06:10:23] 2025-02-22 05:06:04,138 | INFO     | current chi2=0.025788277476230567 (change=21.08719186097005 %)
[2025-02-22 06:10:23] 2025-02-22 05:06:04,139 | INFO     | left removable region: 60
[2025-02-22 06:10:23] 2025-02-22 05:06:04,139 | INFO     | model: linear, x: [1740173122.0, 1740173183.0, 1740173244.0, 1740173305.0, 1740173366.0, 1740173427.0, 1740173488.0, 1740173549.0, 1740173610.0, 1740173671.0, 1740
[2025-02-22 06:10:23] 2025-02-22 05:06:04,140 | INFO     | sum of square deviations: 27694837408.0
[2025-02-22 06:10:23] 2025-02-22 05:06:04,146 | INFO     | sum of deviations: 27751332436.000004
[2025-02-22 06:10:23] 2025-02-22 05:06:04,146 | INFO     | mean x: 1740186725.0
[2025-02-22 06:10:23] 2025-02-22 05:06:04,146 | INFO     | mean y: 2381475.375838926
[2025-02-22 06:10:23] 2025-02-22 05:06:04,146 | INFO     | -- intersect: -1741355077.2077565
[2025-02-22 06:10:23] 2025-02-22 05:06:04,146 | INFO     | intersect: -1741355077.2077565
[2025-02-22 06:10:23] 2025-02-22 05:06:04,147 | INFO     | chi2: 0.002628315285345414
[2025-02-22 06:10:23] 2025-02-22 05:06:04,147 | INFO     | -- intersect: -1741355077.2077565
[2025-02-22 06:10:23] 2025-02-22 05:06:04,147 | INFO     | current memory leak: 1.00 B/s (using 447 data points, chi2=0.00)
[2025-02-22 06:10:23] 2025-02-22 05:06:04,148 | INFO     | ..............................
[2025-02-22 06:10:23] 2025-02-22 05:06:04,148 | INFO     | . Timing measurements:
[2025-02-22 06:10:23] 2025-02-22 05:06:04,148 | INFO     | . get job = 0 s
[2025-02-22 06:10:23] 2025-02-22 05:06:04,149 | INFO     | . initial setup = 1 s
[2025-02-22 06:10:23] 2025-02-22 05:06:04,149 | INFO     | . payload setup = 5 s
[2025-02-22 06:10:23] 2025-02-22 05:06:04,149 | INFO     | . stage-in = 0 s
[2025-02-22 06:10:23] 2025-02-22 05:06:04,149 | INFO     | . payload execution = 31290 s
[2025-02-22 06:10:23] 2025-02-22 05:06:04,149 | INFO     | . stage-out = 1 s
[2025-02-22 06:10:23] 2025-02-22 05:06:04,149 | INFO     | . log creation = 0 s
[2025-02-22 06:10:23] 2025-02-22 05:06:04,149 | INFO     | ..............................
[2025-02-22 06:10:23] 2025-02-22 05:06:04,260 | INFO     | 
[2025-02-22 06:10:23] 2025-02-22 05:06:04,261 | INFO     | job summary report
[2025-02-22 06:10:23] 2025-02-22 05:06:04,261 | INFO     | --------------------------------------------------
[2025-02-22 06:10:23] 2025-02-22 05:06:04,261 | INFO     | PanDA job id: 6516815346
[2025-02-22 06:10:23] 2025-02-22 05:06:04,261 | INFO     | task id: 43078919
[2025-02-22 06:10:23] 2025-02-22 05:06:04,261 | INFO     | errors: (none)
[2025-02-22 06:10:23] 2025-02-22 05:06:04,261 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-22 06:10:23] 2025-02-22 05:06:04,261 | INFO     | pilot state: finished 
[2025-02-22 06:10:23] 2025-02-22 05:06:04,262 | INFO     | transexitcode: 0
[2025-02-22 06:10:23] 2025-02-22 05:06:04,262 | INFO     | exeerrorcode: 0
[2025-02-22 06:10:23] 2025-02-22 05:06:04,262 | INFO     | exeerrordiag: 
[2025-02-22 06:10:23] 2025-02-22 05:06:04,262 | INFO     | exitcode: 0
[2025-02-22 06:10:23] 2025-02-22 05:06:04,262 | INFO     | exitmsg: OK
[2025-02-22 06:10:23] 2025-02-22 05:06:04,262 | INFO     | cpuconsumptiontime: 118514 s
[2025-02-22 06:10:23] 2025-02-22 05:06:04,262 | INFO     | nevents: 400
[2025-02-22 06:10:23] 2025-02-22 05:06:04,263 | INFO     | neventsw: 0
[2025-02-22 06:10:23] 2025-02-22 05:06:04,263 | INFO     | pid: 911576
[2025-02-22 06:10:23] 2025-02-22 05:06:04,263 | INFO     | pgrp: 911576
[2025-02-22 06:10:23] 2025-02-22 05:06:04,263 | INFO     | corecount: 4
[2025-02-22 06:10:23] 2025-02-22 05:06:04,263 | INFO     | event service: False
[2025-02-22 06:10:23] 2025-02-22 05:06:04,263 | INFO     | sizes: {0: 2383204, 1: 2383403, 5: 2383609, 11: 2383665, 31300: 2421669, 31303: 2430632, 31306: 2430816, 31312: 2430986}
[2025-02-22 06:10:23] 2025-02-22 05:06:04,263 | INFO     | --------------------------------------------------
[2025-02-22 06:10:23] 2025-02-22 05:06:04,263 | INFO     | 
[2025-02-22 06:10:23] 2025-02-22 05:06:04,264 | INFO     | executing command: ls -lF /scratch/boinc/var/slot28/slots/0
[2025-02-22 06:10:23] 2025-02-22 05:06:04,282 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-22 06:10:23] 2025-02-22 05:06:04,283 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-22 06:10:23] 2025-02-22 05:06:04,283 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-22 06:10:23] 2025-02-22 05:06:04,283 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-22 06:10:23] 2025-02-22 05:06:04,283 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-22 06:10:23] 2025-02-22 05:06:04,283 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-22 06:10:23] 2025-02-22 05:06:04,283 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-22 06:10:23] 2025-02-22 05:06:04,283 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-22 06:10:23] 2025-02-22 05:06:04,284 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-22 06:10:23] 2025-02-22 05:06:04,284 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-22 06:10:23] 2025-02-22 05:06:04,284 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-22 06:10:23] 2025-02-22 05:06:04,284 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-22 06:10:23] 2025-02-22 05:06:04,284 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-22 06:10:23] 2025-02-22 05:06:04,284 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-22 06:10:23] 2025-02-22 05:06:04,284 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-22 06:10:23] 2025-02-22 05:06:04,285 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-22 06:10:23] 2025-02-22 05:06:04,285 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-22 06:10:23] 2025-02-22 05:06:04,285 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-22 06:10:23] 2025-02-22 05:06:04,285 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-22 06:10:23] 2025-02-22 05:06:04,285 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-22 06:10:23] 2025-02-22 05:06:04,285 | INFO     | job 6516815346 has completed (purged errors)
[2025-02-22 06:10:23] 2025-02-22 05:06:04,286 | INFO     | overall cleanup function is called
[2025-02-22 06:10:23] 2025-02-22 05:06:05,293 | INFO     | --- collectZombieJob: --- 10, [911576]
[2025-02-22 06:10:23] 2025-02-22 05:06:05,293 | INFO     | zombie collector waiting for pid 911576
[2025-02-22 06:10:23] 2025-02-22 05:06:05,293 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-22 06:10:23] 2025-02-22 05:06:05,293 | INFO     | collected zombie processes
[2025-02-22 06:10:23] 2025-02-22 05:06:05,293 | INFO     | will attempt to kill all subprocesses of pid=911576
[2025-02-22 06:10:23] 2025-02-22 05:06:05,427 | INFO     | process IDs to be killed: [911576] (in reverse order)
[2025-02-22 06:10:23] 2025-02-22 05:06:05,525 | WARNING  | found no corresponding commands to process id(s)
[2025-02-22 06:10:23] 2025-02-22 05:06:05,525 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-22 06:10:23] 2025-02-22 05:06:05,533 | INFO     | did not find any defunct processes belonging to 911576
[2025-02-22 06:10:23] 2025-02-22 05:06:05,542 | INFO     | did not find any defunct processes belonging to 911576
[2025-02-22 06:10:23] 2025-02-22 05:06:05,542 | INFO     | ready for new job
[2025-02-22 06:10:23] 2025-02-22 05:06:05,542 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-22 06:10:23] 2025-02-22 05:06:05,545 | INFO     | **************************************
[2025-02-22 06:10:23] 2025-02-22 05:06:05,545 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-22 06:10:23] 2025-02-22 05:06:05,545 | INFO     | **************************************
[2025-02-22 06:10:23] 2025-02-22 05:06:05,546 | INFO     | 
[2025-02-22 06:10:23] 2025-02-22 05:06:05,548 | INFO     | architecture information:
[2025-02-22 06:10:23] 2025-02-22 05:06:05,549 | INFO     | executing command: cat /etc/os-release
[2025-02-22 06:10:23] 2025-02-22 05:06:05,562 | INFO     | cat /etc/os-release:
[2025-02-22 06:10:23] NAME="CentOS Linux"
[2025-02-22 06:10:23] VERSION="7 (Core)"
[2025-02-22 06:10:23] ID="centos"
[2025-02-22 06:10:23] ID_LIKE="rhel fedora"
[2025-02-22 06:10:23] VERSION_ID="7"
[2025-02-22 06:10:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-22 06:10:23] ANSI_COLOR="0;31"
[2025-02-22 06:10:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-22 06:10:23] HOME_URL="https://www.centos.org/"
[2025-02-22 06:10:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-22 06:10:23] 
[2025-02-22 06:10:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-22 06:10:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-22 06:10:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-22 06:10:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-22 06:10:23] 
[2025-02-22 06:10:23] 2025-02-22 05:06:05,563 | INFO     | **************************************
[2025-02-22 06:10:23] 2025-02-22 05:06:06,065 | INFO     | executing command: df -mP /scratch/boinc/var/slot28/slots/0
[2025-02-22 06:10:23] 2025-02-22 05:06:06,078 | INFO     | sufficient remaining disk space (1645803995136 B)
[2025-02-22 06:10:23] 2025-02-22 05:06:06,079 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-22 06:10:23] 2025-02-22 05:06:06,079 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-22 06:10:23] 2025-02-22 05:06:06,079 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-22 06:10:23] 2025-02-22 05:06:06,080 | INFO     | found 0 job(s) in 20 queues
[2025-02-22 06:10:23] 2025-02-22 05:06:06,080 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-22 06:10:23] 2025-02-22 05:06:06,080 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-22 06:10:23] 2025-02-22 05:06:06,080 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-22 06:10:23] 2025-02-22 05:06:06,081 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-22 06:10:23] 2025-02-22 05:06:06,081 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-22 06:10:23] 2025-02-22 05:06:06,081 | INFO     | aborting loop
[2025-02-22 06:10:23] 2025-02-22 05:06:06,249 | INFO     | all data control threads have been joined
[2025-02-22 06:10:23] 2025-02-22 05:06:06,422 | INFO     | all payload control threads have been joined
[2025-02-22 06:10:23] 2025-02-22 05:06:07,084 | INFO     | [job] retrieve thread has finished
[2025-02-22 06:10:23] 2025-02-22 05:06:07,086 | INFO     | [job] queue monitor thread has finished
[2025-02-22 06:10:23] 2025-02-22 05:06:07,086 | INFO     | [job] job monitor thread has finished
[2025-02-22 06:10:23] 2025-02-22 05:06:07,136 | INFO     | [job] create_data_payload thread has finished
[2025-02-22 06:10:23] 2025-02-22 05:06:07,254 | INFO     | [data] control thread has finished
[2025-02-22 06:10:23] 2025-02-22 05:06:07,427 | INFO     | [payload] control thread has finished
[2025-02-22 06:10:23] 2025-02-22 05:06:07,436 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-22 06:10:23] 2025-02-22 05:06:07,438 | INFO     | all job control threads have been joined
[2025-02-22 06:10:23] 2025-02-22 05:06:07,630 | INFO     | [payload] validate_post thread has finished
[2025-02-22 06:10:23] 2025-02-22 05:06:07,652 | INFO     | [payload] failed_post thread has finished
[2025-02-22 06:10:23] 2025-02-22 05:06:07,806 | INFO     | [job] validate thread has finished
[2025-02-22 06:10:23] 2025-02-22 05:06:07,963 | INFO     | [payload] validate_pre thread has finished
[2025-02-22 06:10:23] 2025-02-22 05:06:08,085 | INFO     | [data] copytool_out thread has finished
[2025-02-22 06:10:23] 2025-02-22 05:06:08,137 | INFO     | [payload] execute_payloads thread has finished
[2025-02-22 06:10:23] 2025-02-22 05:06:08,137 | INFO     | [data] copytool_in thread has finished
[2025-02-22 06:10:23] 2025-02-22 05:06:08,379 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-22 06:10:23] 2025-02-22 05:06:08,443 | INFO     | [job] control thread has finished
[2025-02-22 06:10:23] 2025-02-22 05:06:12,384 | INFO     | [data] queue_monitor thread has finished
[2025-02-22 06:10:23] 2025-02-22 05:06:13,068 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22962108372800)>', '<ExcThread(monitor, started 22961872402176)>']
[2025-02-22 06:10:23] 2025-02-22 05:06:13,115 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-22 06:10:23] 2025-02-22 05:06:13,115 | INFO     | [monitor] control thread has ended
[2025-02-22 06:10:23] 2025-02-22 05:06:18,093 | INFO     | all workflow threads have been joined
[2025-02-22 06:10:23] 2025-02-22 05:06:18,093 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-22 06:10:23] 2025-02-22 05:06:18,093 | INFO     | traces error code: 0
[2025-02-22 06:10:23] 2025-02-22 05:06:18,094 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-22 06:10:23] 2025-02-22 05:06:18,216 [wrapper] ==== pilot stdout END ====
[2025-02-22 06:10:23] 2025-02-22 05:06:18,219 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-22 06:10:23] 2025-02-22 05:06:18,221 [wrapper] pilotpid: 904789
[2025-02-22 06:10:23] 2025-02-22 05:06:18,224 [wrapper] Pilot exit status: 0
[2025-02-22 06:10:23] 2025-02-22 05:06:18,234 [wrapper] pandaids: 6516815346
[2025-02-22 06:10:23] 2025-02-22 05:06:18,290 [wrapper] cleanup supervisor_pilot 1633954 904790
[2025-02-22 06:10:23] 2025-02-22 05:06:18,292 [wrapper] Test setup, not cleaning
[2025-02-22 06:10:23] 2025-02-22 05:06:18,298 [wrapper] apfmon messages muted
[2025-02-22 06:10:23] 2025-02-22 05:06:18,301 [wrapper] ==== wrapper stdout END ====
[2025-02-22 06:10:23] 2025-02-22 05:06:18,303 [wrapper] ==== wrapper stderr END ====
[2025-02-22 06:10:23]  *** Error codes and diagnostics ***
[2025-02-22 06:10:23]     "exeErrorCode": 0,
[2025-02-22 06:10:23]     "exeErrorDiag": "",
[2025-02-22 06:10:23]     "pilotErrorCode": 0,
[2025-02-22 06:10:23]     "pilotErrorDiag": "",
[2025-02-22 06:10:23]  *** Listing of results directory ***
[2025-02-22 06:10:23] total 665028
[2025-02-22 06:10:23] -rw-r--r-- 1 boinc boinc    491065 Feb 17 14:19 pilot3.tar.gz
[2025-02-22 06:10:23] -rwx------ 1 boinc boinc     35862 Feb 17 14:26 runpilot2-wrapper.sh
[2025-02-22 06:10:23] -rw-r--r-- 1 boinc boinc      5118 Feb 17 14:26 queuedata.json
[2025-02-22 06:10:23] -rw-r--r-- 1 boinc boinc       100 Feb 21 21:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-22 06:10:23] -rwxr-xr-x 1 boinc boinc      7986 Feb 21 21:23 run_atlas
[2025-02-22 06:10:23] -rw-r--r-- 1 boinc boinc       105 Feb 21 21:23 job.xml
[2025-02-22 06:10:23] -rw-r--r-- 2 boinc boinc 344703364 Feb 21 21:23 EVNT.43078917._002161.pool.root.1
[2025-02-22 06:10:23] -rw-r--r-- 1 boinc boinc      6420 Feb 21 21:23 init_data.xml
[2025-02-22 06:10:23] drwxrwx--x 2 boinc boinc      4096 Feb 21 21:23 shared
[2025-02-22 06:10:23] -rw-r--r-- 2 boinc boinc    503558 Feb 21 21:23 input.tar.gz
[2025-02-22 06:10:23] -rw-r--r-- 2 boinc boinc     17569 Feb 21 21:23 start_atlas.sh
[2025-02-22 06:10:23] -rw-r--r-- 1 boinc boinc         0 Feb 21 21:23 boinc_lockfile
[2025-02-22 06:10:23] -rw-r--r-- 1 boinc boinc      2549 Feb 21 21:23 pandaJob.out
[2025-02-22 06:10:23] -rw------- 1 boinc boinc       424 Feb 21 21:23 setup.sh.local
[2025-02-22 06:10:23] -rw------- 1 boinc boinc    987320 Feb 21 21:23 agis_schedconf.cvmfs.json
[2025-02-22 06:10:23] drwx------ 4 boinc boinc      4096 Feb 21 21:23 pilot3
[2025-02-22 06:10:23] -rw------- 1 boinc boinc 323507284 Feb 22 06:04 HITS.43078919._065712.pool.root.1
[2025-02-22 06:10:23] -rw-r--r-- 1 boinc boinc       533 Feb 22 06:04 boinc_task_state.xml
[2025-02-22 06:10:23] -rw------- 1 boinc boinc      1039 Feb 22 06:05 memory_monitor_summary.json
[2025-02-22 06:10:23] -rw------- 1 boinc boinc   1582569 Feb 22 06:05 agis_ddmendpoints.agis.ALL.json
[2025-02-22 06:10:23] -rw------- 1 boinc boinc    558131 Feb 22 06:05 log.43078919._065712.job.log.tgz.1
[2025-02-22 06:10:23] -rw------- 1 boinc boinc        95 Feb 22 06:06 pilot_heartbeat.json
[2025-02-22 06:10:23] -rw------- 1 boinc boinc      7750 Feb 22 06:06 heartbeat.json
[2025-02-22 06:10:23] -rw------- 1 boinc boinc      4349 Feb 22 06:06 pilotlog.txt
[2025-02-22 06:10:23] -rw------- 1 boinc boinc   3925198 Feb 22 06:06 log.43078919._065712.job.log.1
[2025-02-22 06:10:23] -rw------- 1 boinc boinc       357 Feb 22 06:06 output.list
[2025-02-22 06:10:23] -rw-r--r-- 1 boinc boinc       620 Feb 22 06:06 runtime_log
[2025-02-22 06:10:23] -rw------- 1 boinc boinc   4505600 Feb 22 06:06 result.tar.gz
[2025-02-22 06:10:23] -rw-r--r-- 1 boinc boinc     11424 Feb 22 06:06 runtime_log.err
[2025-02-22 06:10:23] -rw------- 1 boinc boinc       667 Feb 22 06:06 P46KDmCKG46nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmw1jKDmoXnJZm.diag
[2025-02-22 06:10:23] -rw-r--r-- 1 boinc boinc        29 Feb 22 06:09 wrapper_checkpoint.txt
[2025-02-22 06:10:23] -rw-r--r-- 1 boinc boinc      8192 Feb 22 06:10 boinc_mmap_file
[2025-02-22 06:10:23] -rw-r--r-- 1 boinc boinc     21391 Feb 22 06:10 stderr.txt
[2025-02-22 06:10:23] HITS file was successfully produced:
[2025-02-22 06:10:23] -rw------- 1 boinc boinc 323507284 Feb 22 06:04 shared/HITS.pool.root.1
[2025-02-22 06:10:23]  *** Contents of shared directory: ***
[2025-02-22 06:10:23] total 657472
[2025-02-22 06:10:23] -rw-r--r-- 2 boinc boinc 344703364 Feb 21 21:23 ATLAS.root_0
[2025-02-22 06:10:23] -rw-r--r-- 2 boinc boinc    503558 Feb 21 21:23 input.tar.gz
[2025-02-22 06:10:23] -rw-r--r-- 2 boinc boinc     17569 Feb 21 21:23 start_atlas.sh
[2025-02-22 06:10:23] -rw------- 1 boinc boinc 323507284 Feb 22 06:04 HITS.pool.root.1
[2025-02-22 06:10:23] -rw------- 1 boinc boinc   4505600 Feb 22 06:06 result.tar.gz
06:10:25 (901172): run_atlas exited; CPU time 118628.432162
06:10:25 (901172): called boinc_finish(0)

</stderr_txt>
]]>

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