Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-02-16 01:01:40 (10860): Detected: vboxwrapper 26206
2025-02-16 01:01:40 (10860): Detected: BOINC client v8.0.2
2025-02-16 01:01:41 (10860): Detected: VirtualBox VboxManage Interface (Version: 6.1.36)
2025-02-16 01:01:41 (10860): Successfully copied 'init_data.xml' to the shared directory.
2025-02-16 01:01:42 (10860): Create VM. (boinc_1ec8606fa268f162, slot#0)
2025-02-16 01:01:42 (10860): Setting Memory Size for VM. (4200MB)
2025-02-16 01:01:43 (10860): Setting CPU Count for VM. (2)
2025-02-16 01:01:43 (10860): Setting Chipset Options for VM.
2025-02-16 01:01:43 (10860): Setting Graphics Controller Options for VM.
2025-02-16 01:01:44 (10860): Setting Boot Options for VM.
2025-02-16 01:01:44 (10860): Setting Network Configuration for NAT.
2025-02-16 01:01:44 (10860): Enabling VM Network Access.
2025-02-16 01:01:44 (10860): Disabling USB Support for VM.
2025-02-16 01:01:45 (10860): Disabling COM Port Support for VM.
2025-02-16 01:01:45 (10860): Disabling LPT Port Support for VM.
2025-02-16 01:01:45 (10860): Disabling Audio Support for VM.
2025-02-16 01:01:46 (10860): Disabling Clipboard Support for VM.
2025-02-16 01:01:46 (10860): Disabling Drag and Drop Support for VM.
2025-02-16 01:01:46 (10860): Adding storage controller(s) to VM.
2025-02-16 01:01:47 (10860): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-02-16 01:01:47 (10860): Adding VirtualBox Guest Additions to VM.
2025-02-16 01:01:47 (10860): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-02-16 01:01:48 (10860): forwarding host port 63471 to guest port 80
2025-02-16 01:01:48 (10860): Enabling remote desktop for VM.
2025-02-16 01:01:49 (10860): Enabling shared directory for VM.
2025-02-16 01:01:49 (10860): Starting VM using VBoxManage interface. (boinc_1ec8606fa268f162, slot#0)
2025-02-16 01:01:55 (10860): Successfully started VM. (PID = '2936')
2025-02-16 01:01:55 (10860): Reporting VM Process ID to BOINC.
2025-02-16 01:01:55 (10860): Guest Log: BIOS: VirtualBox 6.1.36
2025-02-16 01:01:55 (10860): Guest Log: CPUID EDX: 0x178bfbff
2025-02-16 01:01:55 (10860): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-02-16 01:01:55 (10860): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-02-16 01:01:55 (10860): VM state change detected. (old = 'poweredoff', new = 'running')
2025-02-16 01:01:55 (10860): Detected: Web Application Enabled (http://localhost:63471)
2025-02-16 01:01:55 (10860): Detected: Remote Desktop Enabled (localhost:63472)
2025-02-16 01:01:55 (10860): Preference change detected
2025-02-16 01:01:55 (10860): Setting CPU throttle for VM. (100%)
2025-02-16 01:01:55 (10860): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 600 seconds) or (Vbox_job.xml: 900 seconds))
2025-02-16 01:01:57 (10860): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-02-16 01:01:57 (10860): Guest Log: BIOS: Booting from Hard Disk...
2025-02-16 01:02:00 (10860): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-02-16 01:02:00 (10860): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-02-16 01:02:00 (10860): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-02-16 01:02:00 (10860): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-02-16 01:02:00 (10860): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-02-16 01:02:00 (10860): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-02-16 01:02:00 (10860): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-02-16 01:02:00 (10860): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-02-16 01:02:00 (10860): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-02-16 01:02:00 (10860): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-02-16 01:02:00 (10860): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-02-16 01:02:00 (10860): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-02-16 01:02:00 (10860): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-02-16 01:02:00 (10860): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-02-16 01:02:00 (10860): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-02-16 01:02:00 (10860): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-02-16 01:02:00 (10860): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-02-16 01:02:00 (10860): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-02-16 01:02:00 (10860): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-02-16 01:02:00 (10860): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-02-16 01:02:00 (10860): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-02-16 01:02:00 (10860): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-02-16 01:02:00 (10860): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-02-16 01:02:00 (10860): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-02-16 01:02:00 (10860): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-02-16 01:02:00 (10860): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-02-16 01:02:00 (10860): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-02-16 01:02:00 (10860): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-02-16 01:02:00 (10860): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-02-16 01:02:00 (10860): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-02-16 01:02:00 (10860): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-02-16 01:02:00 (10860): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-02-16 01:02:07 (10860): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-02-16 01:02:07 (10860): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-02-16 01:02:14 (10860): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-02-16 01:02:14 (10860): Guest Log: 00:00:00.000173 main     Log opened 2025-02-16T01:02:12.558115000Z
2025-02-16 01:02:14 (10860): Guest Log: 00:00:00.000333 main     OS Product: Linux
2025-02-16 01:02:14 (10860): Guest Log: 00:00:00.000383 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-02-16 01:02:14 (10860): Guest Log: 00:00:00.000426 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-02-16 01:02:14 (10860): Guest Log: 00:00:00.000470 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-02-16 01:02:14 (10860): Guest Log: 00:00:00.000471 main     Process ID: 1262
2025-02-16 01:02:14 (10860): Guest Log: 00:00:00.000471 main     Package type: LINUX_64BITS_GENERIC
2025-02-16 01:02:14 (10860): Guest Log: 00:00:00.001664 main     5.2.32 r132073 started. Verbose level = 0
2025-02-16 01:02:14 (10860): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-02-16 01:02:14 (10860): Guest Log: [INFO] Mounting shared directory
2025-02-16 01:02:14 (10860): Guest Log: [INFO] Checking for init_data.xml
2025-02-16 01:02:18 (10860): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-02-16 01:02:18 (10860): Guest Log: [INFO] Detected branch: prod
2025-02-16 01:02:18 (10860): Guest Log: This is the prod version of the ATLAS job wrapper
2025-02-16 01:02:18 (10860): Guest Log: Copying input files
2025-02-16 01:02:20 (10860): Guest Log: Copied input files into RunAtlas.
2025-02-16 01:02:20 (10860): Guest Log: Detected user-configured HTTP proxy at http://192.168.35.184:3128 - will set in /etc/cvmfs/default.local
2025-02-16 01:02:24 (10860): Guest Log: 00:00:10.005617 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 333 632 000ns (GuestNow=1 739 664 144 229 436 000 ns GuestLast=1 739 667 732 563 068 000 ns fSetTimeLastLoop=true )
2025-02-16 01:02:41 (10860): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-02-16 01:02:41 (10860): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-02-16 01:02:41 (10860): Guest Log: 2.6.3.0 1535 0 29512 142696 4 1 3117296 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.35.184:3128 1
2025-02-16 01:02:42 (10860): Guest Log: copied the webapp to /var/www
2025-02-16 01:02:42 (10860): Guest Log: ATHENA_PROC_NUMBER=2
2025-02-16 01:02:42 (10860): Guest Log: ATHENA_CORE_NUMBER=2
2025-02-16 01:02:42 (10860): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-02-16 01:02:42 (10860): Guest Log:  *** Starting ATLAS job. (PandaID=6513852025 taskID=43205094) ***
2025-02-16 02:41:59 (10860): Status Report: Elapsed Time: '6000.000000'
2025-02-16 02:41:59 (10860): Status Report: CPU Time: '11154.539503'
2025-02-16 04:22:05 (10860): Status Report: Elapsed Time: '12000.000000'
2025-02-16 04:22:05 (10860): Status Report: CPU Time: '23146.804376'
2025-02-16 06:02:08 (10860): Status Report: Elapsed Time: '18000.000000'
2025-02-16 06:02:08 (10860): Status Report: CPU Time: '35140.722860'
2025-02-16 07:42:14 (10860): Status Report: Elapsed Time: '24000.000000'
2025-02-16 07:42:14 (10860): Status Report: CPU Time: '47144.578607'
2025-02-16 09:22:18 (10860): Status Report: Elapsed Time: '30000.000000'
2025-02-16 09:22:18 (10860): Status Report: CPU Time: '59139.152295'
2025-02-16 11:02:32 (10860): Status Report: Elapsed Time: '36000.000000'
2025-02-16 11:02:32 (10860): Status Report: CPU Time: '71046.084621'
2025-02-16 12:42:47 (10860): Status Report: Elapsed Time: '42000.000000'
2025-02-16 12:42:47 (10860): Status Report: CPU Time: '83053.887193'
2025-02-16 14:22:52 (10860): Status Report: Elapsed Time: '48000.000000'
2025-02-16 14:22:52 (10860): Status Report: CPU Time: '95044.872858'
2025-02-16 14:55:48 (10860): Guest Log:  *** Job finished ***
2025-02-16 14:55:48 (10860): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-02-16 14:55:48 (10860): Guest Log: 2025-02-16 13:55:33,349 | INFO     | [data] queue_monitor thread has finished
2025-02-16 14:55:48 (10860): Guest Log: 2025-02-16 13:55:39,688 | INFO     | job.realtimelogging is not enabled
2025-02-16 14:55:48 (10860): Guest Log: 2025-02-16 13:55:40,689 | INFO     | [payload] run_realtimelog thread has finished
2025-02-16 14:55:48 (10860): Guest Log: 2025-02-16 13:55:42,789 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140188315260736)>', '<ExcThread(monitor, started 140187631859456)>']
2025-02-16 14:55:48 (10860): Guest Log: 2025-02-16 13:55:43,415 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-02-16 14:55:48 (10860): Guest Log: 2025-02-16 13:55:43,415 | INFO     | [monitor] control thread has ended
2025-02-16 14:55:48 (10860): Guest Log: 2025-02-16 13:55:47,795 | INFO     | all workflow threads have been joined
2025-02-16 14:55:48 (10860): Guest Log: 2025-02-16 13:55:47,795 | INFO     | end of generic workflow (traces error code: 0)
2025-02-16 14:55:48 (10860): Guest Log: 2025-02-16 13:55:47,795 | INFO     | traces error code: 0
2025-02-16 14:55:48 (10860): Guest Log: 2025-02-16 13:55:47,795 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-02-16 14:55:48 (10860): Guest Log: 2025-02-16 13:55:47,905 [wrapper] ==== pilot stdout END ====
2025-02-16 14:55:48 (10860): Guest Log: 2025-02-16 13:55:47,910 [wrapper] ==== wrapper stdout RESUME ====
2025-02-16 14:55:48 (10860): Guest Log: 2025-02-16 13:55:47,915 [wrapper] pilotpid: 5838
2025-02-16 14:55:48 (10860): Guest Log: 2025-02-16 13:55:47,920 [wrapper] Pilot exit status: 0
2025-02-16 14:55:48 (10860): Guest Log: 2025-02-16 13:55:47,961 [wrapper] pandaids: 6513852025
2025-02-16 14:55:48 (10860): Guest Log: 2025-02-16 13:55:47,993 [wrapper] cleanup supervisor_pilot 13164 5839
2025-02-16 14:55:48 (10860): Guest Log: 2025-02-16 13:55:47,998 [wrapper] Test setup, not cleaning
2025-02-16 14:55:48 (10860): Guest Log: 2025-02-16 13:55:48,009 [wrapper] apfmon messages muted
2025-02-16 14:55:48 (10860): Guest Log: 2025-02-16 13:55:48,014 [wrapper] ==== wrapper stdout END ====
2025-02-16 14:55:48 (10860): Guest Log: 2025-02-16 13:55:48,019 [wrapper] ==== wrapper stderr END ====
2025-02-16 14:55:48 (10860): Guest Log:  *** Error codes and diagnostics ***
2025-02-16 14:55:48 (10860): Guest Log:     "exeErrorCode": 0,
2025-02-16 14:55:48 (10860): Guest Log:     "exeErrorDiag": "",
2025-02-16 14:55:48 (10860): Guest Log:     "pilotErrorCode": 0,
2025-02-16 14:55:48 (10860): Guest Log:     "pilotErrorDiag": "",
2025-02-16 14:55:48 (10860): Guest Log:  *** Listing of results directory ***
2025-02-16 14:55:48 (10860): Guest Log: total 342028
2025-02-16 14:55:48 (10860): Guest Log: -rw-r--r--. 1 atlas atlas    491065 Feb 15 05:04 pilot3.tar.gz
2025-02-16 14:55:48 (10860): Guest Log: -rw-r--r--. 1 atlas atlas      5118 Feb 15 05:11 queuedata.json
2025-02-16 14:55:48 (10860): Guest Log: -rwx------. 1 atlas atlas     34964 Feb 15 05:11 runpilot2-wrapper.sh
2025-02-16 14:55:48 (10860): Guest Log: -rwxr-xr-x. 1 atlas atlas      8441 Feb 16 00:02 init_data.xml
2025-02-16 14:55:48 (10860): Guest Log: -rwxr-xr-x. 1 atlas atlas    503496 Feb 16 00:02 input.tar.gz
2025-02-16 14:55:48 (10860): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Feb 16 00:02 start_atlas.sh
2025-02-16 14:55:48 (10860): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb 16 00:02 EVNT.43092757._001579.pool.root.1 -> /data/./ATLAS.root_0
2025-02-16 14:55:48 (10860): Guest Log: -rw-r--r--. 1 atlas atlas      2549 Feb 16 00:02 pandaJob.out
2025-02-16 14:55:48 (10860): Guest Log: -rw-------. 1 atlas atlas       461 Feb 16 00:02 setup.sh.local
2025-02-16 14:55:49 (10860): Guest Log: -rw-------. 1 atlas atlas    986042 Feb 16 00:03 agis_schedconf.cvmfs.json
2025-02-16 14:55:49 (10860): Guest Log: drwx------. 4 atlas atlas      4096 Feb 16 00:03 pilot3
2025-02-16 14:55:49 (10860): Guest Log: -rw-------. 1 atlas atlas 333297478 Feb 16 13:54 HITS.43205094._016420.pool.root.1
2025-02-16 14:55:49 (10860): Guest Log: -rw-------. 1 atlas atlas        95 Feb 16 13:54 pilot_heartbeat.json
2025-02-16 14:55:49 (10860): Guest Log: -rw-------. 1 atlas atlas      1024 Feb 16 13:55 memory_monitor_summary.json
2025-02-16 14:55:49 (10860): Guest Log: -rw-------. 1 atlas atlas   1593946 Feb 16 13:55 agis_ddmendpoints.agis.ALL.json
2025-02-16 14:55:49 (10860): Guest Log: -rw-------. 1 atlas atlas    696413 Feb 16 13:55 log.43205094._016420.job.log.tgz.1
2025-02-16 14:55:49 (10860): Guest Log: -rw-------. 1 atlas atlas      7730 Feb 16 13:55 heartbeat.json
2025-02-16 14:55:49 (10860): Guest Log: -rw-------. 1 atlas atlas      4470 Feb 16 13:55 pilotlog.txt
2025-02-16 14:55:49 (10860): Guest Log: -rw-------. 1 atlas atlas   5896411 Feb 16 13:55 log.43205094._016420.job.log.1
2025-02-16 14:55:49 (10860): Guest Log: -rw-------. 1 atlas atlas       357 Feb 16 13:55 output.list
2025-02-16 14:55:49 (10860): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb 16 13:55 runtime_log
2025-02-16 14:55:49 (10860): Guest Log: -rw-------. 1 atlas atlas   6615040 Feb 16 13:55 result.tar.gz
2025-02-16 14:55:49 (10860): Guest Log: -rw-------. 1 atlas atlas       665 Feb 16 13:55 RyeKDmUdP36nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmXSeKDmSc218m.diag
2025-02-16 14:55:49 (10860): Guest Log: -rw-r--r--. 1 atlas atlas     11326 Feb 16 13:55 runtime_log.err
2025-02-16 14:55:49 (10860): Guest Log: Looking for outputfile HITS.43205094._016420.pool.root.1
2025-02-16 14:55:49 (10860): Guest Log: HITS file was successfully produced
2025-02-16 14:55:49 (10860): Guest Log: -rw-------. 1 atlas atlas 333297478 Feb 16 13:54 /home/atlas/RunAtlas/HITS.43205094._016420.pool.root.1
2025-02-16 14:55:50 (10860): Guest Log: Successfully finished the ATLAS job!
2025-02-16 14:55:50 (10860): Guest Log: Copying the results back to the shared directory!
2025-02-16 14:55:50 (10860): Guest Log:  *** Contents of shared directory: ***
2025-02-16 14:55:50 (10860): Guest Log: total 673912
2025-02-16 14:55:50 (10860): Guest Log: -rwxrwxrwx. 1 root root 349632270 Feb 16 00:01 ATLAS.root_0
2025-02-16 14:55:50 (10860): Guest Log: -rwxrwxrwx. 1 root root 333297478 Feb 16 13:55 HITS.pool.root.1
2025-02-16 14:55:50 (10860): Guest Log: -rwxrwxrwx. 1 root root      8441 Feb 16 00:01 init_data.xml
2025-02-16 14:55:50 (10860): Guest Log: -rwxrwxrwx. 1 root root    503496 Feb 15 08:54 input.tar.gz
2025-02-16 14:55:50 (10860): Guest Log: -rwxrwxrwx. 1 root root   6615040 Feb 16  2025 result.tar.gz
2025-02-16 14:55:50 (10860): Guest Log: -rwxrwxrwx. 1 root root     17569 Feb 15 08:54 start_atlas.sh
2025-02-16 14:55:50 (10860): Guest Log:  *** Success! Shutting down the machine. ***
2025-02-16 14:55:50 (10860): VM Completion File Detected.
2025-02-16 14:55:50 (10860): Powering off VM.
2025-02-16 14:55:51 (10860): Successfully stopped VM.
2025-02-16 14:55:51 (10860): Deregistering VM. (boinc_1ec8606fa268f162, slot#0)
2025-02-16 14:55:52 (10860): Removing network bandwidth throttle group from VM.
2025-02-16 14:55:52 (10860): Removing VM from VirtualBox.
14:55:57 (10860): called boinc_finish(0)

</stderr_txt>
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