Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
17:56:22 (865086): wrapper (7.7.26015): starting
17:56:22 (865086): wrapper: running run_atlas (--nthreads 4)
[2025-02-14 17:56:22] Arguments: --nthreads 4
[2025-02-14 17:56:22] Threads: 4
[2025-02-14 17:56:22] Checking for CVMFS
[2025-02-14 17:56:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-14 17:56:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-14 17:56:22] Running cvmfs_config stat atlas.cern.ch
[2025-02-14 17:56:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-14 17:56:22] 2.12.4.4 1868664 5633 67724 142645 3 56 9481818 10240001 1818 130560 0 12521370 99.996 1257060 372 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.101:3128 1
[2025-02-14 17:56:22] CVMFS is ok
[2025-02-14 17:56:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-14 17:56:22] Checking for apptainer binary...
[2025-02-14 17:56:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-14 17:56:22] Running /usr/bin/apptainer --version
[2025-02-14 17:56:22] apptainer version 1.3.4
[2025-02-14 17:56:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-14 17:56:22] atlas6l2
[2025-02-14 17:56:22] apptainer works
[2025-02-14 17:56:22] Set ATHENA_PROC_NUMBER=4
[2025-02-14 17:56:22] Set ATHENA_CORE_NUMBER=4
[2025-02-14 17:56:22] Starting ATLAS job with PandaID=6513030567
[2025-02-14 17:56:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc_data/boinc-01/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-14 21:11:55]  *** The last 200 lines of the pilot log: ***
[2025-02-14 21:11:55] 2025-02-14 20:11:36,372 | INFO     | -- intersect: -23339018076.549114
[2025-02-14 21:11:55] 2025-02-14 20:11:36,372 | INFO     | intersect: -23339018076.549114
[2025-02-14 21:11:55] 2025-02-14 20:11:36,372 | INFO     | chi2: 1.7457697062054087
[2025-02-14 21:11:55] 2025-02-14 20:11:36,372 | INFO     | current chi2=1.7457697062054087 (change=27.381202596173633 %)
[2025-02-14 21:11:55] 2025-02-14 20:11:36,372 | INFO     | model: linear, x: [1739552209.0, 1739552270.0, 1739552331.0, 1739552392.0, 1739552453.0, 1739552514.0, 1739552575.0, 1739552636.0, 1739552697.0, 1739552758.0, 1739
[2025-02-14 21:11:55] 2025-02-14 20:11:36,373 | INFO     | sum of square deviations: 1869302025.5
[2025-02-14 21:11:55] 2025-02-14 20:11:36,373 | INFO     | sum of deviations: 26097409728.999996
[2025-02-14 21:11:55] 2025-02-14 20:11:36,373 | INFO     | mean x: 1739557729.5
[2025-02-14 21:11:55] 2025-02-14 20:11:36,373 | INFO     | mean y: 2350504.131868132
[2025-02-14 21:11:55] 2025-02-14 20:11:36,373 | INFO     | -- intersect: -24283693267.66976
[2025-02-14 21:11:55] 2025-02-14 20:11:36,373 | INFO     | intersect: -24283693267.66976
[2025-02-14 21:11:55] 2025-02-14 20:11:36,374 | INFO     | chi2: 1.7473001025817978
[2025-02-14 21:11:55] 2025-02-14 20:11:36,374 | INFO     | current chi2=1.7473001025817978 (change=-0.0876631305348707 %)
[2025-02-14 21:11:55] 2025-02-14 20:11:36,374 | INFO     | right removable region: 181
[2025-02-14 21:11:55] 2025-02-14 20:11:36,374 | INFO     | model: linear, x: [1739552514.0, 1739552575.0, 1739552636.0, 1739552697.0, 1739552758.0, 1739552819.0, 1739552880.0, 1739552941.0, 1739553002.0, 1739553063.0, 1739
[2025-02-14 21:11:55] 2025-02-14 20:11:36,374 | INFO     | sum of square deviations: 2027639878.0
[2025-02-14 21:11:55] 2025-02-14 20:11:36,375 | INFO     | sum of deviations: -16247714230.999998
[2025-02-14 21:11:55] 2025-02-14 20:11:36,375 | INFO     | mean x: 1739558187.0
[2025-02-14 21:11:55] 2025-02-14 20:11:36,375 | INFO     | mean y: 2372382.4278074866
[2025-02-14 21:11:55] 2025-02-14 20:11:36,375 | INFO     | -- intersect: 13941654509.020731
[2025-02-14 21:11:55] 2025-02-14 20:11:36,375 | INFO     | intersect: 13941654509.020731
[2025-02-14 21:11:55] 2025-02-14 20:11:36,375 | INFO     | chi2: 0.7652724093595458
[2025-02-14 21:11:55] 2025-02-14 20:11:36,375 | INFO     | current chi2=0.7652724093595458 (change=68.16695704107943 %)
[2025-02-14 21:11:55] 2025-02-14 20:11:36,375 | INFO     | model: linear, x: [1739552819.0, 1739552880.0, 1739552941.0, 1739553002.0, 1739553063.0, 1739553124.0, 1739553185.0, 1739553246.0, 1739553307.0, 1739553368.0, 1739
[2025-02-14 21:11:55] 2025-02-14 20:11:36,375 | INFO     | sum of square deviations: 1869302025.5
[2025-02-14 21:11:55] 2025-02-14 20:11:36,376 | INFO     | sum of deviations: -10411584066.0
[2025-02-14 21:11:55] 2025-02-14 20:11:36,376 | INFO     | mean x: 1739558339.5
[2025-02-14 21:11:55] 2025-02-14 20:11:36,376 | INFO     | mean y: 2366733.032967033
[2025-02-14 21:11:55] 2025-02-14 20:11:36,376 | INFO     | -- intersect: 9691308189.441622
[2025-02-14 21:11:55] 2025-02-14 20:11:36,376 | INFO     | intersect: 9691308189.441622
[2025-02-14 21:11:55] 2025-02-14 20:11:36,376 | INFO     | chi2: 0.7314340508724956
[2025-02-14 21:11:55] 2025-02-14 20:11:36,376 | INFO     | current chi2=0.7314340508724956 (change=4.421740294461865 %)
[2025-02-14 21:11:55] 2025-02-14 20:11:36,376 | INFO     | left removable region: 20
[2025-02-14 21:11:55] 2025-02-14 20:11:36,376 | INFO     | model: linear, x: [1739553429.0, 1739553490.0, 1739553551.0, 1739553612.0, 1739553673.0, 1739553734.0, 1739553795.0, 1739553856.0, 1739553917.0, 1739553978.0, 1739
[2025-02-14 21:11:55] 2025-02-14 20:11:36,376 | INFO     | sum of square deviations: 1294014960.0
[2025-02-14 21:11:55] 2025-02-14 20:11:36,377 | INFO     | sum of deviations: 2049760856.9999995
[2025-02-14 21:11:55] 2025-02-14 20:11:36,377 | INFO     | mean x: 1739558309.0
[2025-02-14 21:11:55] 2025-02-14 20:11:36,377 | INFO     | mean y: 2374071.198757764
[2025-02-14 21:11:55] 2025-02-14 20:11:36,377 | INFO     | -- intersect: -2753141622.57445
[2025-02-14 21:11:55] 2025-02-14 20:11:36,377 | INFO     | intersect: -2753141622.57445
[2025-02-14 21:11:55] 2025-02-14 20:11:36,377 | INFO     | chi2: 0.0003825311909242901
[2025-02-14 21:11:55] 2025-02-14 20:11:36,377 | INFO     | -- intersect: -2753141622.57445
[2025-02-14 21:11:55] 2025-02-14 20:11:36,377 | INFO     | current memory leak: 1.58 B/s (using 161 data points, chi2=0.00)
[2025-02-14 21:11:55] 2025-02-14 20:11:36,378 | INFO     | ..............................
[2025-02-14 21:11:55] 2025-02-14 20:11:36,378 | INFO     | . Timing measurements:
[2025-02-14 21:11:55] 2025-02-14 20:11:36,378 | INFO     | . get job = 0 s
[2025-02-14 21:11:55] 2025-02-14 20:11:36,378 | INFO     | . initial setup = 1 s
[2025-02-14 21:11:55] 2025-02-14 20:11:36,378 | INFO     | . payload setup = 3 s
[2025-02-14 21:11:55] 2025-02-14 20:11:36,378 | INFO     | . stage-in = 0 s
[2025-02-14 21:11:55] 2025-02-14 20:11:36,378 | INFO     | . payload execution = 11679 s
[2025-02-14 21:11:55] 2025-02-14 20:11:36,378 | INFO     | . stage-out = 1 s
[2025-02-14 21:11:55] 2025-02-14 20:11:36,378 | INFO     | . log creation = 0 s
[2025-02-14 21:11:55] 2025-02-14 20:11:36,378 | INFO     | ..............................
[2025-02-14 21:11:55] 2025-02-14 20:11:36,430 | INFO     | 
[2025-02-14 21:11:55] 2025-02-14 20:11:36,430 | WARNING  | process 875372 can no longer be monitored (due to stat problems) - aborting
[2025-02-14 21:11:55] 2025-02-14 20:11:36,430 | INFO     | job summary report
[2025-02-14 21:11:55] 2025-02-14 20:11:36,430 | INFO     | --------------------------------------------------
[2025-02-14 21:11:55] 2025-02-14 20:11:36,431 | INFO     | PanDA job id: 6513030567
[2025-02-14 21:11:55] 2025-02-14 20:11:36,431 | INFO     | task id: 43205094
[2025-02-14 21:11:55] 2025-02-14 20:11:36,431 | INFO     | errors: (none)
[2025-02-14 21:11:55] 2025-02-14 20:11:36,431 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-14 21:11:55] 2025-02-14 20:11:36,431 | INFO     | pilot state: finished 
[2025-02-14 21:11:55] 2025-02-14 20:11:36,431 | INFO     | transexitcode: 0
[2025-02-14 21:11:55] 2025-02-14 20:11:36,431 | INFO     | exeerrorcode: 0
[2025-02-14 21:11:55] 2025-02-14 20:11:36,431 | INFO     | exeerrordiag: 
[2025-02-14 21:11:55] 2025-02-14 20:11:36,431 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/2/PanDA_Pilot-6513030567/memory_monitor_summary.json (trf name=prmon)
[2025-02-14 21:11:55] 2025-02-14 20:11:36,431 | INFO     | exitcode: 0
[2025-02-14 21:11:55] 2025-02-14 20:11:36,431 | INFO     | exitmsg: OK
[2025-02-14 21:11:55] 2025-02-14 20:11:36,431 | INFO     | cpuconsumptiontime: 44915 s
[2025-02-14 21:11:55] 2025-02-14 20:11:36,432 | INFO     | nevents: 400
[2025-02-14 21:11:55] 2025-02-14 20:11:36,432 | INFO     | neventsw: 0
[2025-02-14 21:11:55] 2025-02-14 20:11:36,432 | INFO     | pid: 875372
[2025-02-14 21:11:55] 2025-02-14 20:11:36,432 | INFO     | pgrp: 875372
[2025-02-14 21:11:55] 2025-02-14 20:11:36,432 | INFO     | corecount: 4
[2025-02-14 21:11:55] 2025-02-14 20:11:36,432 | INFO     | event service: False
[2025-02-14 21:11:55] 2025-02-14 20:11:36,432 | INFO     | sizes: {0: 2399170, 2: 2399376, 10: 2399404, 11687: 2428713, 11688: 2437738, 11694: 2437852}
[2025-02-14 21:11:55] 2025-02-14 20:11:36,432 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/2/PanDA_Pilot-6513030567/memory_monitor_summary.json (trf name=prmon)
[2025-02-14 21:11:55] 2025-02-14 20:11:36,432 | INFO     | --------------------------------------------------
[2025-02-14 21:11:55] 2025-02-14 20:11:36,433 | INFO     | 
[2025-02-14 21:11:55] 2025-02-14 20:11:36,433 | INFO     | executing command: ls -lF /var/lib/boinc_data/boinc-01/slots/2
[2025-02-14 21:11:55] 2025-02-14 20:11:36,439 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 2717172 B
[2025-02-14 21:11:55] 2025-02-14 20:11:36,440 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15562 B
[2025-02-14 21:11:55] 2025-02-14 20:11:36,440 | INFO     | executing command: df -mP /var/lib/boinc_data/boinc-01/slots/2
[2025-02-14 21:11:55] 2025-02-14 20:11:36,447 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-14 21:11:55] 2025-02-14 20:11:36,447 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-14 21:11:55] 2025-02-14 20:11:36,447 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-14 21:11:55] 2025-02-14 20:11:36,447 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-14 21:11:55] 2025-02-14 20:11:36,447 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-14 21:11:55] 2025-02-14 20:11:36,447 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-14 21:11:55] 2025-02-14 20:11:36,447 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-14 21:11:55] 2025-02-14 20:11:36,448 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-14 21:11:55] 2025-02-14 20:11:36,448 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-14 21:11:55] 2025-02-14 20:11:36,448 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-14 21:11:55] 2025-02-14 20:11:36,448 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-14 21:11:55] 2025-02-14 20:11:36,448 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-14 21:11:55] 2025-02-14 20:11:36,448 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-14 21:11:55] 2025-02-14 20:11:36,448 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-14 21:11:55] 2025-02-14 20:11:36,448 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-14 21:11:55] 2025-02-14 20:11:36,448 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-14 21:11:55] 2025-02-14 20:11:36,448 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-14 21:11:55] 2025-02-14 20:11:36,448 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-14 21:11:55] 2025-02-14 20:11:36,448 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-14 21:11:55] 2025-02-14 20:11:36,448 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-14 21:11:55] 2025-02-14 20:11:36,448 | INFO     | job 6513030567 has completed (purged errors)
[2025-02-14 21:11:55] 2025-02-14 20:11:36,448 | INFO     | overall cleanup function is called
[2025-02-14 21:11:55] 2025-02-14 20:11:36,449 | INFO     | sufficient remaining disk space (23388487680 B)
[2025-02-14 21:11:55] 2025-02-14 20:11:36,449 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-02-14 21:11:55] 2025-02-14 20:11:36,449 | INFO     | size of work directory /var/lib/boinc_data/boinc-01/slots/2/PanDA_Pilot-6513030567: 3057814 B (within 2537553920 B limit)
[2025-02-14 21:11:55] 2025-02-14 20:11:36,449 | INFO     | pfn file=/var/lib/boinc_data/boinc-01/slots/2/PanDA_Pilot-6513030567/HITS.43205094._014382.pool.root.1 does not exist (skip from workdir size calculation)
[2025-02-14 21:11:55] 2025-02-14 20:11:36,449 | INFO     | total size of present files: 0 B (workdir size: 3057814 B)
[2025-02-14 21:11:55] 2025-02-14 20:11:36,449 | INFO     | output file size check: skipping output file /var/lib/boinc_data/boinc-01/slots/2/PanDA_Pilot-6513030567/HITS.43205094._014382.pool.root.1 since it does not exist
[2025-02-14 21:11:55] 2025-02-14 20:11:36,486 | INFO     | number of running child processes to parent process 875372: 1
[2025-02-14 21:11:55] 2025-02-14 20:11:36,487 | INFO     | maximum number of monitored processes: 7
[2025-02-14 21:11:55] 2025-02-14 20:11:36,487 | INFO     | aborting job monitoring since job object (job id=6513030567) has expired
[2025-02-14 21:11:55] 2025-02-14 20:11:37,458 | INFO     | --- collectZombieJob: --- 10, [875372]
[2025-02-14 21:11:55] 2025-02-14 20:11:37,458 | INFO     | zombie collector waiting for pid 875372
[2025-02-14 21:11:55] 2025-02-14 20:11:37,458 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-14 21:11:55] 2025-02-14 20:11:37,458 | INFO     | collected zombie processes
[2025-02-14 21:11:55] 2025-02-14 20:11:37,458 | INFO     | will attempt to kill all subprocesses of pid=875372
[2025-02-14 21:11:55] 2025-02-14 20:11:37,498 | INFO     | process IDs to be killed: [875372] (in reverse order)
[2025-02-14 21:11:55] 2025-02-14 20:11:37,526 | WARNING  | found no corresponding commands to process id(s)
[2025-02-14 21:11:55] 2025-02-14 20:11:37,526 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-14 21:11:55] 2025-02-14 20:11:37,529 | INFO     | did not find any defunct processes belonging to 875372
[2025-02-14 21:11:55] 2025-02-14 20:11:37,531 | INFO     | did not find any defunct processes belonging to 875372
[2025-02-14 21:11:55] 2025-02-14 20:11:37,531 | INFO     | ready for new job
[2025-02-14 21:11:55] 2025-02-14 20:11:37,531 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-14 21:11:55] 2025-02-14 20:11:37,532 | INFO     | **************************************
[2025-02-14 21:11:55] 2025-02-14 20:11:37,532 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-14 21:11:55] 2025-02-14 20:11:37,532 | INFO     | **************************************
[2025-02-14 21:11:55] 2025-02-14 20:11:37,532 | INFO     | 
[2025-02-14 21:11:55] 2025-02-14 20:11:37,532 | INFO     | pilot is running in a VM
[2025-02-14 21:11:55] 2025-02-14 20:11:37,533 | INFO     | architecture information:
[2025-02-14 21:11:55] 2025-02-14 20:11:37,533 | INFO     | executing command: cat /etc/os-release
[2025-02-14 21:11:55] 2025-02-14 20:11:37,541 | INFO     | cat /etc/os-release:
[2025-02-14 21:11:55] NAME="CentOS Linux"
[2025-02-14 21:11:55] VERSION="7 (Core)"
[2025-02-14 21:11:55] ID="centos"
[2025-02-14 21:11:55] ID_LIKE="rhel fedora"
[2025-02-14 21:11:55] VERSION_ID="7"
[2025-02-14 21:11:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-14 21:11:55] ANSI_COLOR="0;31"
[2025-02-14 21:11:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-14 21:11:55] HOME_URL="https://www.centos.org/"
[2025-02-14 21:11:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-14 21:11:55] 
[2025-02-14 21:11:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-14 21:11:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-14 21:11:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-14 21:11:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-14 21:11:55] 
[2025-02-14 21:11:55] 2025-02-14 20:11:37,541 | INFO     | **************************************
[2025-02-14 21:11:55] 2025-02-14 20:11:38,043 | INFO     | executing command: df -mP /var/lib/boinc_data/boinc-01/slots/2
[2025-02-14 21:11:55] 2025-02-14 20:11:38,054 | INFO     | sufficient remaining disk space (23392681984 B)
[2025-02-14 21:11:55] 2025-02-14 20:11:38,054 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-14 21:11:55] 2025-02-14 20:11:38,054 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-14 21:11:55] 2025-02-14 20:11:38,055 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-14 21:11:55] 2025-02-14 20:11:38,055 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-14 21:11:55] 2025-02-14 20:11:38,055 | INFO     | aborting loop
[2025-02-14 21:11:55] 2025-02-14 20:11:38,055 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-14 21:11:55] 2025-02-14 20:11:38,373 | INFO     | all data control threads have been joined
[2025-02-14 21:11:55] 2025-02-14 20:11:38,831 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-14 21:11:55] 2025-02-14 20:11:38,977 | INFO     | found 0 job(s) in 20 queues
[2025-02-14 21:11:55] 2025-02-14 20:11:38,977 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-14 21:11:55] 2025-02-14 20:11:38,977 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-14 21:11:55] 2025-02-14 20:11:39,060 | INFO     | [job] retrieve thread has finished
[2025-02-14 21:11:55] 2025-02-14 20:11:39,060 | INFO     | [job] job monitor thread has finished
[2025-02-14 21:11:55] 2025-02-14 20:11:39,061 | INFO     | [job] queue monitor thread has finished
[2025-02-14 21:11:55] 2025-02-14 20:11:39,084 | INFO     | all payload control threads have been joined
[2025-02-14 21:11:55] 2025-02-14 20:11:39,101 | INFO     | [job] create_data_payload thread has finished
[2025-02-14 21:11:55] 2025-02-14 20:11:39,224 | INFO     | [payload] validate_pre thread has finished
[2025-02-14 21:11:55] 2025-02-14 20:11:39,332 | INFO     | [payload] failed_post thread has finished
[2025-02-14 21:11:55] 2025-02-14 20:11:39,379 | INFO     | [data] control thread has finished
[2025-02-14 21:11:55] 2025-02-14 20:11:39,514 | INFO     | [payload] execute_payloads thread has finished
[2025-02-14 21:11:55] 2025-02-14 20:11:39,521 | INFO     | all job control threads have been joined
[2025-02-14 21:11:55] 2025-02-14 20:11:40,090 | INFO     | [payload] control thread has finished
[2025-02-14 21:11:55] 2025-02-14 20:11:40,158 | INFO     | [payload] validate_post thread has finished
[2025-02-14 21:11:55] 2025-02-14 20:11:40,401 | INFO     | [job] validate thread has finished
[2025-02-14 21:11:55] 2025-02-14 20:11:40,401 | INFO     | [data] copytool_in thread has finished
[2025-02-14 21:11:55] 2025-02-14 20:11:40,527 | INFO     | [job] control thread has finished
[2025-02-14 21:11:55] 2025-02-14 20:11:40,837 | INFO     | [data] copytool_out thread has finished
[2025-02-14 21:11:55] 2025-02-14 20:11:42,060 | INFO     | [data] queue_monitor thread has finished
[2025-02-14 21:11:55] 2025-02-14 20:11:48,113 | INFO     | job.realtimelogging is not enabled
[2025-02-14 21:11:55] 2025-02-14 20:11:49,118 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-14 21:11:55] 2025-02-14 20:11:50,396 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 138484926965568)>', '<ExcThread(monitor, started 138484532643584)>']
[2025-02-14 21:11:55] 2025-02-14 20:11:51,039 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-14 21:11:55] 2025-02-14 20:11:51,039 | INFO     | [monitor] control thread has ended
[2025-02-14 21:11:55] 2025-02-14 20:11:55,413 | INFO     | all workflow threads have been joined
[2025-02-14 21:11:55] 2025-02-14 20:11:55,413 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-14 21:11:55] 2025-02-14 20:11:55,413 | INFO     | traces error code: 0
[2025-02-14 21:11:55] 2025-02-14 20:11:55,414 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-14 21:11:55] 2025-02-14 20:11:55,490 [wrapper] ==== pilot stdout END ====
[2025-02-14 21:11:55] 2025-02-14 20:11:55,493 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-14 21:11:55] 2025-02-14 20:11:55,495 [wrapper] pilotpid: 868835
[2025-02-14 21:11:55] 2025-02-14 20:11:55,499 [wrapper] Pilot exit status: 0
[2025-02-14 21:11:55] 2025-02-14 20:11:55,515 [wrapper] pandaids: 6513030567
[2025-02-14 21:11:55] 2025-02-14 20:11:55,539 [wrapper] cleanup supervisor_pilot  967589 868836
[2025-02-14 21:11:55] 2025-02-14 20:11:55,544 [wrapper] Test setup, not cleaning
[2025-02-14 21:11:55] 2025-02-14 20:11:55,551 [wrapper] apfmon messages muted
[2025-02-14 21:11:55] 2025-02-14 20:11:55,556 [wrapper] ==== wrapper stdout END ====
[2025-02-14 21:11:55] 2025-02-14 20:11:55,561 [wrapper] ==== wrapper stderr END ====
[2025-02-14 21:11:55]  *** Error codes and diagnostics ***
[2025-02-14 21:11:55]     "exeErrorCode": 0,
[2025-02-14 21:11:55]     "exeErrorDiag": "",
[2025-02-14 21:11:55]     "pilotErrorCode": 0,
[2025-02-14 21:11:55]     "pilotErrorDiag": "",
[2025-02-14 21:11:55]  *** Listing of results directory ***
[2025-02-14 21:11:55] insgesamt 660656
[2025-02-14 21:11:55] -rw-r--r-- 1 yeti boinc    491065 Feb 14 08:04 pilot3.tar.gz
[2025-02-14 21:11:55] -rw-r--r-- 1 yeti boinc      5118 Feb 14 08:17 queuedata.json
[2025-02-14 21:11:55] -rwx------ 1 yeti boinc     34924 Feb 14 08:18 runpilot2-wrapper.sh
[2025-02-14 21:11:55] -rw-r--r-- 1 yeti boinc       100 Feb 14 17:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-14 21:11:55] -rwxr-xr-x 1 yeti boinc      7986 Feb 14 17:56 run_atlas
[2025-02-14 21:11:55] -rw-r--r-- 1 yeti boinc       105 Feb 14 17:56 job.xml
[2025-02-14 21:11:55] -rw-r--r-- 2 yeti boinc 342434938 Feb 14 17:56 EVNT.43092757._001450.pool.root.1
[2025-02-14 21:11:55] -rw-r--r-- 2 yeti boinc     17569 Feb 14 17:56 start_atlas.sh
[2025-02-14 21:11:55] drwxrwx--x 2 yeti boinc      4096 Feb 14 17:56 shared
[2025-02-14 21:11:55] -rw-r--r-- 2 yeti boinc    503494 Feb 14 17:56 input.tar.gz
[2025-02-14 21:11:55] -rw-r--r-- 1 yeti boinc      6676 Feb 14 17:56 init_data.xml
[2025-02-14 21:11:55] -rw-r--r-- 1 yeti boinc         0 Feb 14 17:56 boinc_lockfile
[2025-02-14 21:11:55] -rw-r--r-- 1 yeti boinc      2548 Feb 14 17:56 pandaJob.out
[2025-02-14 21:11:55] -rw------- 1 yeti boinc       462 Feb 14 17:56 setup.sh.local
[2025-02-14 21:11:55] -rw------- 1 yeti boinc    986622 Feb 14 17:56 agis_schedconf.cvmfs.json
[2025-02-14 21:11:55] drwx------ 4 yeti boinc      4096 Feb 14 17:56 pilot3
[2025-02-14 21:11:55] -rw------- 1 yeti boinc 327123608 Feb 14 21:10 HITS.43205094._014382.pool.root.1
[2025-02-14 21:11:55] -rw------- 1 yeti boinc        95 Feb 14 21:10 pilot_heartbeat.json
[2025-02-14 21:11:55] -rw-r--r-- 1 yeti boinc       531 Feb 14 21:11 boinc_task_state.xml
[2025-02-14 21:11:55] -rw------- 1 yeti boinc      1027 Feb 14 21:11 memory_monitor_summary.json
[2025-02-14 21:11:55] -rw------- 1 yeti boinc   1593946 Feb 14 21:11 agis_ddmendpoints.agis.ALL.json
[2025-02-14 21:11:55] -rw------- 1 yeti boinc    328513 Feb 14 21:11 log.43205094._014382.job.log.tgz.1
[2025-02-14 21:11:55] -rw------- 1 yeti boinc      7688 Feb 14 21:11 heartbeat.json
[2025-02-14 21:11:55] -rw-r--r-- 1 yeti boinc      8192 Feb 14 21:11 boinc_mmap_file
[2025-02-14 21:11:55] -rw-r--r-- 1 yeti boinc        28 Feb 14 21:11 wrapper_checkpoint.txt
[2025-02-14 21:11:55] -rw------- 1 yeti boinc      4363 Feb 14 21:11 pilotlog.txt
[2025-02-14 21:11:55] -rw------- 1 yeti boinc   1236194 Feb 14 21:11 log.43205094._014382.job.log.1
[2025-02-14 21:11:55] -rw------- 1 yeti boinc       357 Feb 14 21:11 output.list
[2025-02-14 21:11:55] -rw-r--r-- 1 yeti boinc       620 Feb 14 21:11 runtime_log
[2025-02-14 21:11:55] -rw------- 1 yeti boinc   1587200 Feb 14 21:11 result.tar.gz
[2025-02-14 21:11:55] -rw-r--r-- 1 yeti boinc     11617 Feb 14 21:11 runtime_log.err
[2025-02-14 21:11:55] -rw------- 1 yeti boinc       643 Feb 14 21:11 5hpNDm18426n9Rq4apOajLDm4fhM0noT9bVoFjIUDmNDTKDm48wo4n.diag
[2025-02-14 21:11:55] -rw-r--r-- 1 yeti boinc     21790 Feb 14 21:11 stderr.txt
[2025-02-14 21:11:55] HITS file was successfully produced:
[2025-02-14 21:11:55] -rw------- 1 yeti boinc 327123608 Feb 14 21:10 shared/HITS.pool.root.1
[2025-02-14 21:11:55]  *** Contents of shared directory: ***
[2025-02-14 21:11:55] insgesamt 655944
[2025-02-14 21:11:55] -rw-r--r-- 2 yeti boinc 342434938 Feb 14 17:56 ATLAS.root_0
[2025-02-14 21:11:55] -rw-r--r-- 2 yeti boinc     17569 Feb 14 17:56 start_atlas.sh
[2025-02-14 21:11:55] -rw-r--r-- 2 yeti boinc    503494 Feb 14 17:56 input.tar.gz
[2025-02-14 21:11:55] -rw------- 1 yeti boinc 327123608 Feb 14 21:10 HITS.pool.root.1
[2025-02-14 21:11:55] -rw------- 1 yeti boinc   1587200 Feb 14 21:11 result.tar.gz
21:11:57 (865086): run_atlas exited; CPU time 44941.170976
21:11:57 (865086): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN