Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
2025-02-14 05:11:28 (94086): Detected: vboxwrapper 26206
2025-02-14 05:11:28 (94086): Detected: BOINC client v7.24.1
2025-02-14 05:11:28 (94086): Detected: VirtualBox VboxManage Interface (Version: 7.0.16)
2025-02-14 05:11:28 (94086): Successfully copied 'init_data.xml' to the shared directory.
2025-02-14 05:11:28 (94086): Create VM. (boinc_384bb8d7f33ddbe6, slot#3)
2025-02-14 05:11:28 (94086): Setting Memory Size for VM. (4800MB)
2025-02-14 05:11:28 (94086): Setting CPU Count for VM. (8)
2025-02-14 05:11:28 (94086): Setting Chipset Options for VM.
2025-02-14 05:11:28 (94086): Setting Graphics Controller Options for VM.
2025-02-14 05:11:29 (94086): Setting Boot Options for VM.
2025-02-14 05:11:29 (94086): Setting Network Configuration for NAT.
2025-02-14 05:11:29 (94086): Enabling VM Network Access.
2025-02-14 05:11:29 (94086): Disabling USB Support for VM.
2025-02-14 05:11:29 (94086): Disabling COM Port Support for VM.
2025-02-14 05:11:29 (94086): Disabling LPT Port Support for VM.
2025-02-14 05:11:29 (94086): Disabling Audio Support for VM.
2025-02-14 05:11:29 (94086): Disabling Clipboard Support for VM.
2025-02-14 05:11:29 (94086): Disabling Drag and Drop Support for VM.
2025-02-14 05:11:29 (94086): Adding storage controller(s) to VM.
2025-02-14 05:11:29 (94086): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-02-14 05:11:30 (94086): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-02-14 05:11:30 (94086): forwarding host port 51553 to guest port 80
2025-02-14 05:11:30 (94086): Enabling remote desktop for VM.
2025-02-14 05:11:30 (94086): Required extension pack not installed, remote desktop not enabled.
2025-02-14 05:11:30 (94086): Enabling shared directory for VM.
2025-02-14 05:11:30 (94086): Starting VM using VBoxManage interface. (boinc_384bb8d7f33ddbe6, slot#3)
2025-02-14 05:11:32 (94086): Successfully started VM. (PID = '94549')
2025-02-14 05:11:32 (94086): Reporting VM Process ID to BOINC.
2025-02-14 05:11:32 (94086): Guest Log: BIOS: VirtualBox 7.0.16
2025-02-14 05:11:32 (94086): Guest Log: CPUID EDX: 0x178bfbff
2025-02-14 05:11:32 (94086): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-02-14 05:11:32 (94086): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-02-14 05:11:32 (94086): VM state change detected. (old = 'poweredoff', new = 'running')
2025-02-14 05:11:32 (94086): Detected: Web Application Enabled (http://localhost:51553)
2025-02-14 05:11:32 (94086): Preference change detected
2025-02-14 05:11:32 (94086): Setting CPU throttle for VM. (60%)
2025-02-14 05:11:32 (94086): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-02-14 05:11:34 (94086): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-02-14 05:11:34 (94086): Guest Log: BIOS: Booting from Hard Disk...
2025-02-14 05:11:37 (94086): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-02-14 05:11:37 (94086): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-02-14 05:11:37 (94086): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-02-14 05:11:37 (94086): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-02-14 05:11:37 (94086): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-02-14 05:11:37 (94086): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-02-14 05:11:37 (94086): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-02-14 05:11:37 (94086): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-02-14 05:11:37 (94086): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-02-14 05:11:37 (94086): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-02-14 05:11:37 (94086): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-02-14 05:11:37 (94086): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-02-14 05:11:37 (94086): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-02-14 05:11:37 (94086): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-02-14 05:11:37 (94086): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-02-14 05:11:37 (94086): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-02-14 05:11:37 (94086): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-02-14 05:11:37 (94086): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-02-14 05:11:37 (94086): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-02-14 05:11:37 (94086): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-02-14 05:11:37 (94086): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-02-14 05:11:37 (94086): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-02-14 05:11:37 (94086): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-02-14 05:11:37 (94086): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-02-14 05:11:37 (94086): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-02-14 05:11:37 (94086): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-02-14 05:11:37 (94086): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-02-14 05:11:37 (94086): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-02-14 05:11:37 (94086): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-02-14 05:11:37 (94086): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-02-14 05:11:37 (94086): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-02-14 05:11:37 (94086): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-02-14 05:11:43 (94086): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-02-14 05:11:43 (94086): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-02-14 05:11:46 (94086): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-02-14 05:11:46 (94086): Guest Log: 00:00:00.000131 main     Log opened 2025-02-14T12:11:46.838827000Z
2025-02-14 05:11:46 (94086): Guest Log: 00:00:00.000193 main     OS Product: Linux
2025-02-14 05:11:46 (94086): Guest Log: 00:00:00.000204 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-02-14 05:11:46 (94086): Guest Log: 00:00:00.000215 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-02-14 05:11:46 (94086): Guest Log: 00:00:00.000224 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-02-14 05:11:46 (94086): Guest Log: 00:00:00.000224 main     Process ID: 1358
2025-02-14 05:11:46 (94086): Guest Log: 00:00:00.000224 main     Package type: LINUX_64BITS_GENERIC
2025-02-14 05:11:46 (94086): Guest Log: 00:00:00.003995 main     5.2.32 r132073 started. Verbose level = 0
2025-02-14 05:11:47 (94086): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-02-14 05:11:47 (94086): Guest Log: [INFO] Mounting shared directory
2025-02-14 05:11:47 (94086): Guest Log: [INFO] Checking for init_data.xml
2025-02-14 05:11:50 (94086): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-02-14 05:11:50 (94086): Guest Log: [INFO] Detected branch: prod
2025-02-14 05:11:50 (94086): Guest Log: This is the prod version of the ATLAS job wrapper
2025-02-14 05:11:50 (94086): Guest Log: Copying input files
2025-02-14 05:11:51 (94086): Guest Log: Copied input files into RunAtlas.
2025-02-14 05:11:51 (94086): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-02-14 05:11:51 (94086): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-02-14 05:11:51 (94086): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-02-14 05:11:51 (94086): Guest Log: Further information can be found at the LHC@home message board.
2025-02-14 05:11:58 (94086): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-02-14 05:11:59 (94086): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-02-14 05:11:59 (94086): Guest Log: 2.6.3.0 1635 0 32220 142637 4 1 3117296 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-02-14 05:11:59 (94086): Guest Log: copied the webapp to /var/www
2025-02-14 05:11:59 (94086): Guest Log: ATHENA_PROC_NUMBER=8
2025-02-14 05:11:59 (94086): Guest Log: ATHENA_CORE_NUMBER=8
2025-02-14 05:12:00 (94086): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-02-14 05:12:00 (94086): Guest Log:  *** Starting ATLAS job. (PandaID=6512822187 taskID=43078919) ***
2025-02-14 06:50:32 (94086): Status Report: Elapsed Time: '6000.000000'
2025-02-14 06:50:32 (94086): Status Report: CPU Time: '22644.930000'
2025-02-14 07:22:47 (94086): Guest Log:  *** Job finished ***
2025-02-14 07:22:47 (94086): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-02-14 07:22:47 (94086): Guest Log: 2025-02-14 14:34:51,180 | INFO     | [data] queue_monitor thread has finished
2025-02-14 07:22:47 (94086): Guest Log: 2025-02-14 14:34:56,267 | INFO     | job.realtimelogging is not enabled
2025-02-14 07:22:47 (94086): Guest Log: 2025-02-14 14:34:57,357 | INFO     | [payload] run_realtimelog thread has finished
2025-02-14 07:22:47 (94086): Guest Log: 2025-02-14 14:34:58,675 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140212228831040)>', '<ExcThread(monitor, started 140211203856128)>']
2025-02-14 07:22:47 (94086): Guest Log: 2025-02-14 14:34:59,693 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-02-14 07:22:47 (94086): Guest Log: 2025-02-14 14:34:59,693 | INFO     | [monitor] control thread has ended
2025-02-14 07:22:47 (94086): Guest Log: 2025-02-14 14:35:03,714 | INFO     | all workflow threads have been joined
2025-02-14 07:22:47 (94086): Guest Log: 2025-02-14 14:35:03,714 | INFO     | end of generic workflow (traces error code: 0)
2025-02-14 07:22:47 (94086): Guest Log: 2025-02-14 14:35:03,714 | INFO     | traces error code: 0
2025-02-14 07:22:47 (94086): Guest Log: 2025-02-14 14:35:03,715 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-02-14 07:22:47 (94086): Guest Log: 2025-02-14 14:35:03,770 [wrapper] ==== pilot stdout END ====
2025-02-14 07:22:47 (94086): Guest Log: 2025-02-14 14:35:03,773 [wrapper] ==== wrapper stdout RESUME ====
2025-02-14 07:22:47 (94086): Guest Log: 2025-02-14 14:35:03,777 [wrapper] pilotpid: 6038
2025-02-14 07:22:47 (94086): Guest Log: 2025-02-14 14:35:03,779 [wrapper] Pilot exit status: 0
2025-02-14 07:22:47 (94086): Guest Log: 2025-02-14 14:35:03,878 [wrapper] pandaids: 6512822187
2025-02-14 07:22:47 (94086): Guest Log: 2025-02-14 14:35:03,898 [wrapper] cleanup supervisor_pilot  6011 6039
2025-02-14 07:22:47 (94086): Guest Log: 2025-02-14 14:35:03,901 [wrapper] Test setup, not cleaning
2025-02-14 07:22:47 (94086): Guest Log: 2025-02-14 14:35:03,905 [wrapper] apfmon messages muted
2025-02-14 07:22:47 (94086): Guest Log: 2025-02-14 14:35:03,908 [wrapper] ==== wrapper stdout END ====
2025-02-14 07:22:47 (94086): Guest Log: 2025-02-14 14:35:03,910 [wrapper] ==== wrapper stderr END ====
2025-02-14 07:22:47 (94086): Guest Log:  *** Error codes and diagnostics ***
2025-02-14 07:22:47 (94086): Guest Log:     "exeErrorCode": 0,
2025-02-14 07:22:47 (94086): Guest Log:     "exeErrorDiag": "",
2025-02-14 07:22:47 (94086): Guest Log:     "pilotErrorCode": 0,
2025-02-14 07:22:47 (94086): Guest Log:     "pilotErrorDiag": "",
2025-02-14 07:22:47 (94086): Guest Log:  *** Listing of results directory ***
2025-02-14 07:22:47 (94086): Guest Log: total 324592
2025-02-14 07:22:47 (94086): Guest Log: -rw-r--r--. 1 atlas atlas    491065 Feb 14 05:38 pilot3.tar.gz
2025-02-14 07:22:47 (94086): Guest Log: -rwx------. 1 atlas atlas     34924 Feb 14 05:40 runpilot2-wrapper.sh
2025-02-14 07:22:47 (94086): Guest Log: -rw-r--r--. 1 atlas atlas      5118 Feb 14 05:40 queuedata.json
2025-02-14 07:22:47 (94086): Guest Log: -rw-r--r--. 1 atlas atlas     17569 Feb 14 12:11 start_atlas.sh
2025-02-14 07:22:47 (94086): Guest Log: -rw-r--r--. 1 atlas atlas    503489 Feb 14 12:11 input.tar.gz
2025-02-14 07:22:47 (94086): Guest Log: -rw-r--r--. 1 atlas atlas      6904 Feb 14 12:11 init_data.xml
2025-02-14 07:22:47 (94086): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb 14 12:11 EVNT.43078917._001198.pool.root.1 -> /data/./ATLAS.root_0
2025-02-14 07:22:47 (94086): Guest Log: -rw-r--r--. 1 atlas atlas      2548 Feb 14 12:12 pandaJob.out
2025-02-14 07:22:47 (94086): Guest Log: -rw-------. 1 atlas atlas       424 Feb 14 12:12 setup.sh.local
2025-02-14 07:22:47 (94086): Guest Log: -rw-------. 1 atlas atlas    986929 Feb 14 12:13 agis_schedconf.cvmfs.json
2025-02-14 07:22:47 (94086): Guest Log: -rw-------. 1 atlas atlas   1591814 Feb 14 12:13 agis_ddmendpoints.agis.ALL.json
2025-02-14 07:22:47 (94086): Guest Log: drwx------. 4 atlas atlas      4096 Feb 14 12:13 pilot3
2025-02-14 07:22:47 (94086): Guest Log: -rw-------. 1 atlas atlas 326837227 Feb 14 14:33 HITS.43078919._039950.pool.root.1
2025-02-14 07:22:47 (94086): Guest Log: -rw-------. 1 atlas atlas      1025 Feb 14 14:34 memory_monitor_summary.json
2025-02-14 07:22:47 (94086): Guest Log: -rw-------. 1 atlas atlas    321211 Feb 14 14:34 log.43078919._039950.job.log.tgz.1
2025-02-14 07:22:47 (94086): Guest Log: -rw-------. 1 atlas atlas        95 Feb 14 14:34 pilot_heartbeat.json
2025-02-14 07:22:47 (94086): Guest Log: -rw-------. 1 atlas atlas      7703 Feb 14 14:34 heartbeat.json
2025-02-14 07:22:47 (94086): Guest Log: -rw-------. 1 atlas atlas      4849 Feb 14 14:35 pilotlog.txt
2025-02-14 07:22:47 (94086): Guest Log: -rw-------. 1 atlas atlas    583535 Feb 14 14:35 log.43078919._039950.job.log.1
2025-02-14 07:22:47 (94086): Guest Log: -rw-------. 1 atlas atlas       357 Feb 14 14:35 output.list
2025-02-14 07:22:47 (94086): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb 14 14:35 runtime_log
2025-02-14 07:22:47 (94086): Guest Log: -rw-------. 1 atlas atlas    921600 Feb 14 14:35 result.tar.gz
2025-02-14 07:22:47 (94086): Guest Log: -rw-r--r--. 1 atlas atlas     10932 Feb 14 14:35 runtime_log.err
2025-02-14 07:22:47 (94086): Guest Log: -rw-------. 1 atlas atlas       653 Feb 14 14:35 d4MNDmlc326nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmOScKDmMa4lSo.diag
2025-02-14 07:22:47 (94086): Guest Log: Looking for outputfile HITS.43078919._039950.pool.root.1
2025-02-14 07:22:47 (94086): Guest Log: HITS file was successfully produced
2025-02-14 07:22:47 (94086): Guest Log: -rw-------. 1 atlas atlas 326837227 Feb 14 14:33 /home/atlas/RunAtlas/HITS.43078919._039950.pool.root.1
2025-02-14 07:22:47 (94086): Guest Log: Successfully finished the ATLAS job!
2025-02-14 07:22:47 (94086): Guest Log: Copying the results back to the shared directory!
2025-02-14 07:22:47 (94086): Guest Log:  *** Contents of shared directory: ***
2025-02-14 07:22:47 (94086): Guest Log: total 332912
2025-02-14 07:22:47 (94086): Guest Log: -rw-r--r--. 1 root root 339440027 Feb 14 12:11 ATLAS.root_0
2025-02-14 07:22:47 (94086): Guest Log: -rw-r--r--. 1 root root      6904 Feb 14 12:11 init_data.xml
2025-02-14 07:22:47 (94086): Guest Log: -rw-r--r--. 1 root root    503489 Feb 14 12:11 input.tar.gz
2025-02-14 07:22:47 (94086): Guest Log: -rw-r--r--. 1 root root    921600 Feb 14 14:22 result.tar.gz
2025-02-14 07:22:47 (94086): Guest Log: -rw-r--r--. 1 root root     17569 Feb 14 12:11 start_atlas.sh
2025-02-14 07:22:47 (94086): Guest Log:  *** Success! Shutting down the machine. ***
2025-02-14 07:22:47 (94086): VM Completion File Detected.
2025-02-14 07:22:47 (94086): Powering off VM.
2025-02-14 07:22:47 (94086): Successfully stopped VM.
2025-02-14 07:22:47 (94086): Deregistering VM. (boinc_384bb8d7f33ddbe6, slot#3)
2025-02-14 07:22:47 (94086): Removing network bandwidth throttle group from VM.
2025-02-14 07:22:47 (94086): Removing VM from VirtualBox.
07:22:52 (94086): called boinc_finish(0)

</stderr_txt>
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