Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
2025-02-14 07:22:56 (98790): Detected: vboxwrapper 26206
2025-02-14 07:22:56 (98790): Detected: BOINC client v7.24.1
2025-02-14 07:22:56 (98790): Detected: VirtualBox VboxManage Interface (Version: 7.0.16)
2025-02-14 07:22:56 (98790): Successfully copied 'init_data.xml' to the shared directory.
2025-02-14 07:22:56 (98790): Create VM. (boinc_86744c8c5a587991, slot#0)
2025-02-14 07:22:56 (98790): Setting Memory Size for VM. (4800MB)
2025-02-14 07:22:56 (98790): Setting CPU Count for VM. (8)
2025-02-14 07:22:56 (98790): Setting Chipset Options for VM.
2025-02-14 07:22:56 (98790): Setting Graphics Controller Options for VM.
2025-02-14 07:22:56 (98790): Setting Boot Options for VM.
2025-02-14 07:22:56 (98790): Setting Network Configuration for NAT.
2025-02-14 07:22:56 (98790): Enabling VM Network Access.
2025-02-14 07:22:56 (98790): Disabling USB Support for VM.
2025-02-14 07:22:56 (98790): Disabling COM Port Support for VM.
2025-02-14 07:22:56 (98790): Disabling LPT Port Support for VM.
2025-02-14 07:22:56 (98790): Disabling Audio Support for VM.
2025-02-14 07:22:56 (98790): Disabling Clipboard Support for VM.
2025-02-14 07:22:56 (98790): Disabling Drag and Drop Support for VM.
2025-02-14 07:22:56 (98790): Adding storage controller(s) to VM.
2025-02-14 07:22:56 (98790): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-02-14 07:22:58 (98790): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-02-14 07:22:58 (98790): forwarding host port 57565 to guest port 80
2025-02-14 07:22:58 (98790): Enabling remote desktop for VM.
2025-02-14 07:22:58 (98790): Required extension pack not installed, remote desktop not enabled.
2025-02-14 07:22:58 (98790): Enabling shared directory for VM.
2025-02-14 07:22:58 (98790): Starting VM using VBoxManage interface. (boinc_86744c8c5a587991, slot#0)
2025-02-14 07:22:59 (98790): Successfully started VM. (PID = '99256')
2025-02-14 07:22:59 (98790): Reporting VM Process ID to BOINC.
2025-02-14 07:22:59 (98790): Guest Log: BIOS: VirtualBox 7.0.16
2025-02-14 07:22:59 (98790): Guest Log: CPUID EDX: 0x178bfbff
2025-02-14 07:22:59 (98790): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-02-14 07:22:59 (98790): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-02-14 07:22:59 (98790): VM state change detected. (old = 'poweredoff', new = 'running')
2025-02-14 07:22:59 (98790): Detected: Web Application Enabled (http://localhost:57565)
2025-02-14 07:22:59 (98790): Preference change detected
2025-02-14 07:22:59 (98790): Setting CPU throttle for VM. (60%)
2025-02-14 07:22:59 (98790): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-02-14 07:23:01 (98790): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-02-14 07:23:01 (98790): Guest Log: BIOS: Booting from Hard Disk...
2025-02-14 07:23:04 (98790): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-02-14 07:23:04 (98790): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-02-14 07:23:04 (98790): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-02-14 07:23:04 (98790): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-02-14 07:23:04 (98790): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-02-14 07:23:04 (98790): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-02-14 07:23:04 (98790): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-02-14 07:23:04 (98790): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-02-14 07:23:04 (98790): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-02-14 07:23:04 (98790): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-02-14 07:23:04 (98790): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-02-14 07:23:04 (98790): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-02-14 07:23:04 (98790): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-02-14 07:23:04 (98790): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-02-14 07:23:04 (98790): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-02-14 07:23:04 (98790): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-02-14 07:23:04 (98790): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-02-14 07:23:04 (98790): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-02-14 07:23:04 (98790): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-02-14 07:23:04 (98790): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-02-14 07:23:04 (98790): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-02-14 07:23:04 (98790): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-02-14 07:23:04 (98790): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-02-14 07:23:04 (98790): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-02-14 07:23:04 (98790): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-02-14 07:23:04 (98790): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-02-14 07:23:04 (98790): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-02-14 07:23:04 (98790): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-02-14 07:23:04 (98790): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-02-14 07:23:04 (98790): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-02-14 07:23:04 (98790): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-02-14 07:23:04 (98790): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-02-14 07:23:11 (98790): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-02-14 07:23:11 (98790): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-02-14 07:23:15 (98790): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-02-14 07:23:15 (98790): Guest Log: 00:00:00.000102 main     Log opened 2025-02-14T14:23:15.012074000Z
2025-02-14 07:23:15 (98790): Guest Log: 00:00:00.000168 main     OS Product: Linux
2025-02-14 07:23:15 (98790): Guest Log: 00:00:00.000179 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-02-14 07:23:15 (98790): Guest Log: 00:00:00.000189 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-02-14 07:23:15 (98790): Guest Log: 00:00:00.000199 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-02-14 07:23:15 (98790): Guest Log: 00:00:00.000199 main     Process ID: 1356
2025-02-14 07:23:15 (98790): Guest Log: 00:00:00.000199 main     Package type: LINUX_64BITS_GENERIC
2025-02-14 07:23:15 (98790): Guest Log: 00:00:00.000932 main     5.2.32 r132073 started. Verbose level = 0
2025-02-14 07:23:15 (98790): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-02-14 07:23:15 (98790): Guest Log: [INFO] Mounting shared directory
2025-02-14 07:23:15 (98790): Guest Log: [INFO] Checking for init_data.xml
2025-02-14 07:23:19 (98790): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-02-14 07:23:19 (98790): Guest Log: [INFO] Detected branch: prod
2025-02-14 07:23:19 (98790): Guest Log: This is the prod version of the ATLAS job wrapper
2025-02-14 07:23:19 (98790): Guest Log: Copying input files
2025-02-14 07:23:20 (98790): Guest Log: Copied input files into RunAtlas.
2025-02-14 07:23:20 (98790): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-02-14 07:23:20 (98790): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-02-14 07:23:20 (98790): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-02-14 07:23:20 (98790): Guest Log: Further information can be found at the LHC@home message board.
2025-02-14 07:23:27 (98790): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-02-14 07:23:28 (98790): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-02-14 07:23:28 (98790): Guest Log: 2.6.3.0 1634 0 32196 142641 4 1 3117296 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-02-14 07:23:28 (98790): Guest Log: copied the webapp to /var/www
2025-02-14 07:23:28 (98790): Guest Log: ATHENA_PROC_NUMBER=8
2025-02-14 07:23:28 (98790): Guest Log: ATHENA_CORE_NUMBER=8
2025-02-14 07:23:30 (98790): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-02-14 07:23:30 (98790): Guest Log:  *** Starting ATLAS job. (PandaID=6512821512 taskID=43205094) ***
2025-02-14 08:23:23 (98790): VM state change detected. (old = 'running', new = 'paused')
2025-02-14 10:15:00 (98790): VM state change detected. (old = 'paused', new = 'running')
2025-02-14 10:15:01 (98790): Guest Log: 01:05:46.854006 timesync vgsvcTimeSyncWorker: Radical host time change: 6 705 796 000 000ns (HostNow=1 739 553 300 302 000 000 ns HostLast=1 739 546 594 506 000 000 ns)
2025-02-14 10:15:10 (98790): Guest Log: 01:05:56.855385 timesync vgsvcTimeSyncWorker: Radical guest time change: 6 368 469 729 000ns (GuestNow=1 739 553 310 319 336 000 ns GuestLast=1 739 546 941 849 607 000 ns fSetTimeLastLoop=true )
2025-02-14 10:53:38 (98790): Status Report: Elapsed Time: '6000.000000'
2025-02-14 10:53:38 (98790): Status Report: CPU Time: '21200.850000'
2025-02-14 11:15:09 (98790): VM state change detected. (old = 'running', new = 'paused')
2025-02-14 11:36:25 (98790): VM state change detected. (old = 'paused', new = 'running')
2025-02-14 12:05:31 (98790): Guest Log:  *** Job finished ***
2025-02-14 12:05:31 (98790): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-02-14 12:05:31 (98790): Guest Log: 2025-02-14 18:52:28,791 | INFO     | [job] validate thread has finished
2025-02-14 12:05:31 (98790): Guest Log: 2025-02-14 18:52:29,124 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
2025-02-14 12:05:31 (98790): Guest Log: 2025-02-14 18:52:33,242 | INFO     | [data] queue_monitor thread has finished
2025-02-14 12:05:31 (98790): Guest Log: 2025-02-14 18:52:33,713 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139752404600640)>', '<ExcThread(monitor, started 139751382312704)>']
2025-02-14 12:05:31 (98790): Guest Log: 2025-02-14 18:52:34,770 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-02-14 12:05:31 (98790): Guest Log: 2025-02-14 18:52:34,770 | INFO     | [monitor] control thread has ended
2025-02-14 12:05:31 (98790): Guest Log: 2025-02-14 18:52:38,727 | INFO     | all workflow threads have been joined
2025-02-14 12:05:31 (98790): Guest Log: 2025-02-14 18:52:38,727 | INFO     | end of generic workflow (traces error code: 0)
2025-02-14 12:05:31 (98790): Guest Log: 2025-02-14 18:52:38,728 | INFO     | traces error code: 0
2025-02-14 12:05:31 (98790): Guest Log: 2025-02-14 18:52:38,728 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-02-14 12:05:31 (98790): Guest Log: 2025-02-14 18:52:38,771 [wrapper] ==== pilot stdout END ====
2025-02-14 12:05:31 (98790): Guest Log: 2025-02-14 18:52:38,773 [wrapper] ==== wrapper stdout RESUME ====
2025-02-14 12:05:31 (98790): Guest Log: 2025-02-14 18:52:38,775 [wrapper] pilotpid: 6046
2025-02-14 12:05:31 (98790): Guest Log: 2025-02-14 18:52:38,777 [wrapper] Pilot exit status: 0
2025-02-14 12:05:31 (98790): Guest Log: 2025-02-14 18:52:38,884 [wrapper] pandaids: 6512821512
2025-02-14 12:05:31 (98790): Guest Log: 2025-02-14 18:52:38,905 [wrapper] cleanup supervisor_pilot  8272 6047
2025-02-14 12:05:31 (98790): Guest Log: 2025-02-14 18:52:38,908 [wrapper] Test setup, not cleaning
2025-02-14 12:05:31 (98790): Guest Log: 2025-02-14 18:52:38,912 [wrapper] apfmon messages muted
2025-02-14 12:05:31 (98790): Guest Log: 2025-02-14 18:52:38,914 [wrapper] ==== wrapper stdout END ====
2025-02-14 12:05:31 (98790): Guest Log: 2025-02-14 18:52:38,918 [wrapper] ==== wrapper stderr END ====
2025-02-14 12:05:31 (98790): Guest Log:  *** Error codes and diagnostics ***
2025-02-14 12:05:31 (98790): Guest Log:     "exeErrorCode": 0,
2025-02-14 12:05:31 (98790): Guest Log:     "exeErrorDiag": "",
2025-02-14 12:05:31 (98790): Guest Log:     "pilotErrorCode": 0,
2025-02-14 12:05:31 (98790): Guest Log:     "pilotErrorDiag": "",
2025-02-14 12:05:31 (98790): Guest Log:  *** Listing of results directory ***
2025-02-14 12:05:31 (98790): Guest Log: total 320840
2025-02-14 12:05:31 (98790): Guest Log: -rw-r--r--. 1 atlas atlas    491065 Feb 14 05:10 pilot3.tar.gz
2025-02-14 12:05:31 (98790): Guest Log: -rwx------. 1 atlas atlas     34924 Feb 14 05:24 runpilot2-wrapper.sh
2025-02-14 12:05:31 (98790): Guest Log: -rw-r--r--. 1 atlas atlas      5118 Feb 14 05:24 queuedata.json
2025-02-14 12:05:31 (98790): Guest Log: -rw-r--r--. 1 atlas atlas     17569 Feb 14 14:23 start_atlas.sh
2025-02-14 12:05:31 (98790): Guest Log: -rw-r--r--. 1 atlas atlas      6904 Feb 14 14:23 init_data.xml
2025-02-14 12:05:31 (98790): Guest Log: -rw-r--r--. 1 atlas atlas    503496 Feb 14 14:23 input.tar.gz
2025-02-14 12:05:31 (98790): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb 14 14:23 EVNT.43092757._001442.pool.root.1 -> /data/./ATLAS.root_0
2025-02-14 12:05:31 (98790): Guest Log: -rw-r--r--. 1 atlas atlas      2548 Feb 14 14:23 pandaJob.out
2025-02-14 12:05:31 (98790): Guest Log: -rw-------. 1 atlas atlas       424 Feb 14 14:24 setup.sh.local
2025-02-14 12:05:31 (98790): Guest Log: -rw-------. 1 atlas atlas    986945 Feb 14 14:26 agis_schedconf.cvmfs.json
2025-02-14 12:05:31 (98790): Guest Log: drwx------. 4 atlas atlas      4096 Feb 14 14:27 pilot3
2025-02-14 12:05:31 (98790): Guest Log: -rw-------. 1 atlas atlas 322794960 Feb 14 18:50 HITS.43205094._014268.pool.root.1
2025-02-14 12:05:31 (98790): Guest Log: -rw-------. 1 atlas atlas      1026 Feb 14 18:51 memory_monitor_summary.json
2025-02-14 12:05:31 (98790): Guest Log: -rw-------. 1 atlas atlas   1593946 Feb 14 18:52 agis_ddmendpoints.agis.ALL.json
2025-02-14 12:05:31 (98790): Guest Log: -rw-------. 1 atlas atlas    335528 Feb 14 18:52 log.43205094._014268.job.log.tgz.1
2025-02-14 12:05:31 (98790): Guest Log: -rw-------. 1 atlas atlas        97 Feb 14 18:52 pilot_heartbeat.json
2025-02-14 12:05:31 (98790): Guest Log: -rw-------. 1 atlas atlas      7709 Feb 14 18:52 heartbeat.json
2025-02-14 12:05:31 (98790): Guest Log: -rw-------. 1 atlas atlas      4398 Feb 14 18:52 pilotlog.txt
2025-02-14 12:05:31 (98790): Guest Log: -rw-------. 1 atlas atlas    665298 Feb 14 18:52 log.43205094._014268.job.log.1
2025-02-14 12:05:31 (98790): Guest Log: -rw-------. 1 atlas atlas       357 Feb 14 18:52 output.list
2025-02-14 12:05:31 (98790): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb 14 18:52 runtime_log
2025-02-14 12:05:31 (98790): Guest Log: -rw-------. 1 atlas atlas   1024000 Feb 14 18:52 result.tar.gz
2025-02-14 12:05:31 (98790): Guest Log: -rw-------. 1 atlas atlas       656 Feb 14 18:52 vdmKDmpM326nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmOQcKDm0lbkHo.diag
2025-02-14 12:05:31 (98790): Guest Log: -rw-r--r--. 1 atlas atlas     10933 Feb 14 18:52 runtime_log.err
2025-02-14 12:05:31 (98790): Guest Log: Looking for outputfile HITS.43205094._014268.pool.root.1
2025-02-14 12:05:31 (98790): Guest Log: HITS file was successfully produced
2025-02-14 12:05:31 (98790): Guest Log: -rw-------. 1 atlas atlas 322794960 Feb 14 18:50 /home/atlas/RunAtlas/HITS.43205094._014268.pool.root.1
2025-02-14 12:05:31 (98790): Guest Log: Successfully finished the ATLAS job!
2025-02-14 12:05:31 (98790): Guest Log: Copying the results back to the shared directory!
2025-02-14 12:05:33 (98790): Guest Log:  *** Contents of shared directory: ***
2025-02-14 12:05:33 (98790): Guest Log: total 335488
2025-02-14 12:05:33 (98790): Guest Log: -rw-r--r--. 1 root root 341977730 Feb 14 14:22 ATLAS.root_0
2025-02-14 12:05:33 (98790): Guest Log: -rw-r--r--. 1 root root      6904 Feb 14 14:22 init_data.xml
2025-02-14 12:05:33 (98790): Guest Log: -rw-r--r--. 1 root root    503496 Feb 14 14:22 input.tar.gz
2025-02-14 12:05:33 (98790): Guest Log: -rw-r--r--. 1 root root   1024000 Feb 14  2025 result.tar.gz
2025-02-14 12:05:33 (98790): Guest Log: -rw-r--r--. 1 root root     17569 Feb 14 14:22 start_atlas.sh
2025-02-14 12:05:33 (98790): Guest Log:  *** Success! Shutting down the machine. ***
2025-02-14 12:05:33 (98790): VM Completion File Detected.
2025-02-14 12:05:33 (98790): Powering off VM.
2025-02-14 12:05:33 (98790): Successfully stopped VM.
2025-02-14 12:05:33 (98790): Deregistering VM. (boinc_86744c8c5a587991, slot#0)
2025-02-14 12:05:34 (98790): Removing network bandwidth throttle group from VM.
2025-02-14 12:05:34 (98790): Removing VM from VirtualBox.
12:05:39 (98790): called boinc_finish(0)

</stderr_txt>
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