Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
11:25:47 (652697): wrapper (7.7.26015): starting
11:25:47 (652697): wrapper: running run_atlas (--nthreads 4)
[2025-02-14 11:25:47] Arguments: --nthreads 4
[2025-02-14 11:25:47] Threads: 4
[2025-02-14 11:25:47] Checking for CVMFS
[2025-02-14 11:25:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-14 11:25:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-14 11:25:47] Running cvmfs_config stat atlas.cern.ch
[2025-02-14 11:25:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-14 11:25:48] 2.12.4.4 1868664 5243 67444 142634 1 56 9192953 10240001 1818 130560 0 11642454 99.996 1184019 355 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.101:3128 1
[2025-02-14 11:25:48] CVMFS is ok
[2025-02-14 11:25:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-14 11:25:48] Checking for apptainer binary...
[2025-02-14 11:25:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-14 11:25:48] Running /usr/bin/apptainer --version
[2025-02-14 11:25:48] apptainer version 1.3.4
[2025-02-14 11:25:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-14 11:25:48] atlas6l2
[2025-02-14 11:25:48] apptainer works
[2025-02-14 11:25:48] Set ATHENA_PROC_NUMBER=4
[2025-02-14 11:25:48] Set ATHENA_CORE_NUMBER=4
[2025-02-14 11:25:48] Starting ATLAS job with PandaID=6512716166
[2025-02-14 11:25:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc_data/boinc-01/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-14 14:41:22]  *** The last 200 lines of the pilot log: ***
[2025-02-14 14:41:22] 2025-02-14 13:41:06,915 | INFO     | extracted standard info from prmon json
[2025-02-14 14:41:22] 2025-02-14 13:41:06,915 | INFO     | extracted standard memory fields from prmon json
[2025-02-14 14:41:22] 2025-02-14 13:41:06,915 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-02-14 14:41:22] 2025-02-14 13:41:06,915 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-14 14:41:22] 2025-02-14 13:41:06,915 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-14 14:41:22] 2025-02-14 13:41:06,917 | INFO     | fitting pss+swap vs Time
[2025-02-14 14:41:22] 2025-02-14 13:41:06,921 | INFO     | model: linear, x: [1739528776.0, 1739528837.0, 1739528898.0, 1739528959.0, 1739529020.0, 1739529081.0, 1739529142.0, 1739529203.0, 1739529264.0, 1739529325.0, 1739
[2025-02-14 14:41:22] 2025-02-14 13:41:06,921 | INFO     | sum of square deviations: 2194675568.0
[2025-02-14 14:41:22] 2025-02-14 13:41:06,922 | INFO     | sum of deviations: -2007006506.0
[2025-02-14 14:41:22] 2025-02-14 13:41:06,922 | INFO     | mean x: 1739534601.5
[2025-02-14 14:41:22] 2025-02-14 13:41:06,922 | INFO     | mean y: 2370964.09375
[2025-02-14 14:41:22] 2025-02-14 13:41:06,922 | INFO     | -- intersect: 1593156095.8588917
[2025-02-14 14:41:22] 2025-02-14 13:41:06,922 | INFO     | intersect: 1593156095.8588917
[2025-02-14 14:41:22] 2025-02-14 13:41:06,922 | INFO     | chi2: 2.654488653340244
[2025-02-14 14:41:22] 2025-02-14 13:41:06,923 | INFO     | model: linear, x: [1739528776.0, 1739528837.0, 1739528898.0, 1739528959.0, 1739529020.0, 1739529081.0, 1739529142.0, 1739529203.0, 1739529264.0, 1739529325.0, 1739
[2025-02-14 14:41:22] 2025-02-14 13:41:06,923 | INFO     | sum of square deviations: 2027639878.0
[2025-02-14 14:41:22] 2025-02-14 13:41:06,923 | INFO     | sum of deviations: 9369026600.000002
[2025-02-14 14:41:22] 2025-02-14 13:41:06,923 | INFO     | mean x: 1739534449.0
[2025-02-14 14:41:22] 2025-02-14 13:41:06,923 | INFO     | mean y: 2381134.8663101606
[2025-02-14 14:41:22] 2025-02-14 13:41:06,923 | INFO     | -- intersect: -8035409353.044654
[2025-02-14 14:41:22] 2025-02-14 13:41:06,924 | INFO     | intersect: -8035409353.044654
[2025-02-14 14:41:22] 2025-02-14 13:41:06,924 | INFO     | chi2: 2.0022390846864706
[2025-02-14 14:41:22] 2025-02-14 13:41:06,924 | INFO     | current chi2=2.0022390846864706 (change=24.57157116995105 %)
[2025-02-14 14:41:22] 2025-02-14 13:41:06,924 | INFO     | right removable region: 186
[2025-02-14 14:41:22] 2025-02-14 13:41:06,924 | INFO     | model: linear, x: [1739529081.0, 1739529142.0, 1739529203.0, 1739529264.0, 1739529325.0, 1739529386.0, 1739529447.0, 1739529508.0, 1739529569.0, 1739529630.0, 1739
[2025-02-14 14:41:22] 2025-02-14 13:41:06,924 | INFO     | sum of square deviations: 2027639878.0
[2025-02-14 14:41:22] 2025-02-14 13:41:06,925 | INFO     | sum of deviations: -39915162608.0
[2025-02-14 14:41:22] 2025-02-14 13:41:06,925 | INFO     | mean x: 1739534754.0
[2025-02-14 14:41:22] 2025-02-14 13:41:06,925 | INFO     | mean y: 2405411.4919786095
[2025-02-14 14:41:22] 2025-02-14 13:41:06,925 | INFO     | -- intersect: 34246066389.72476
[2025-02-14 14:41:22] 2025-02-14 13:41:06,925 | INFO     | intersect: 34246066389.72476
[2025-02-14 14:41:22] 2025-02-14 13:41:06,925 | INFO     | chi2: 0.776243510498381
[2025-02-14 14:41:22] 2025-02-14 13:41:06,925 | INFO     | current chi2=0.776243510498381 (change=70.75732422055735 %)
[2025-02-14 14:41:22] 2025-02-14 13:41:06,925 | INFO     | model: linear, x: [1739529386.0, 1739529447.0, 1739529508.0, 1739529569.0, 1739529630.0, 1739529691.0, 1739529752.0, 1739529813.0, 1739529874.0, 1739529935.0, 1739
[2025-02-14 14:41:22] 2025-02-14 13:41:06,925 | INFO     | sum of square deviations: 1869302025.5
[2025-02-14 14:41:22] 2025-02-14 13:41:06,926 | INFO     | sum of deviations: -38358480885.5
[2025-02-14 14:41:22] 2025-02-14 13:41:06,926 | INFO     | mean x: 1739534906.5
[2025-02-14 14:41:22] 2025-02-14 13:41:06,926 | INFO     | mean y: 2403884.2472527474
[2025-02-14 14:41:22] 2025-02-14 13:41:06,926 | INFO     | -- intersect: 35698035489.20016
[2025-02-14 14:41:22] 2025-02-14 13:41:06,926 | INFO     | intersect: 35698035489.20016
[2025-02-14 14:41:22] 2025-02-14 13:41:06,926 | INFO     | chi2: 0.7703810313968528
[2025-02-14 14:41:22] 2025-02-14 13:41:06,926 | INFO     | current chi2=0.7703810313968528 (change=0.7552371159617557 %)
[2025-02-14 14:41:22] 2025-02-14 13:41:06,926 | INFO     | left removable region: 20
[2025-02-14 14:41:22] 2025-02-14 13:41:06,926 | INFO     | model: linear, x: [1739529996.0, 1739530057.0, 1739530118.0, 1739530179.0, 1739530240.0, 1739530301.0, 1739530362.0, 1739530423.0, 1739530484.0, 1739530545.0, 1739
[2025-02-14 14:41:22] 2025-02-14 13:41:06,926 | INFO     | sum of square deviations: 1418361477.5
[2025-02-14 14:41:22] 2025-02-14 13:41:06,927 | INFO     | sum of deviations: -19775317452.0
[2025-02-14 14:41:22] 2025-02-14 13:41:06,927 | INFO     | mean x: 1739535028.5
[2025-02-14 14:41:22] 2025-02-14 13:41:06,927 | INFO     | mean y: 2408234.3493975904
[2025-02-14 14:41:22] 2025-02-14 13:41:06,927 | INFO     | -- intersect: 24255645475.461205
[2025-02-14 14:41:22] 2025-02-14 13:41:06,927 | INFO     | intersect: 24255645475.461205
[2025-02-14 14:41:22] 2025-02-14 13:41:06,927 | INFO     | chi2: 0.08691117899765179
[2025-02-14 14:41:22] 2025-02-14 13:41:06,927 | INFO     | -- intersect: 24255645475.461205
[2025-02-14 14:41:22] 2025-02-14 13:41:06,927 | INFO     | current memory leak: -13.94 B/s (using 166 data points, chi2=0.09)
[2025-02-14 14:41:22] 2025-02-14 13:41:06,928 | INFO     | ..............................
[2025-02-14 14:41:22] 2025-02-14 13:41:06,928 | INFO     | . Timing measurements:
[2025-02-14 14:41:22] 2025-02-14 13:41:06,928 | INFO     | . get job = 0 s
[2025-02-14 14:41:22] 2025-02-14 13:41:06,928 | INFO     | . initial setup = 1 s
[2025-02-14 14:41:22] 2025-02-14 13:41:06,928 | INFO     | . payload setup = 3 s
[2025-02-14 14:41:22] 2025-02-14 13:41:06,928 | INFO     | . stage-in = 0 s
[2025-02-14 14:41:22] 2025-02-14 13:41:06,928 | INFO     | . payload execution = 11681 s
[2025-02-14 14:41:22] 2025-02-14 13:41:06,928 | INFO     | . stage-out = 0 s
[2025-02-14 14:41:22] 2025-02-14 13:41:06,928 | INFO     | . log creation = 0 s
[2025-02-14 14:41:22] 2025-02-14 13:41:06,928 | INFO     | ..............................
[2025-02-14 14:41:22] 2025-02-14 13:41:06,966 | WARNING  | process 662976 can no longer be monitored (due to stat problems) - aborting
[2025-02-14 14:41:22] 2025-02-14 13:41:06,966 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/2/PanDA_Pilot-6512716166/memory_monitor_summary.json (trf name=prmon)
[2025-02-14 14:41:22] 2025-02-14 13:41:07,016 | INFO     | number of running child processes to parent process 662976: 1
[2025-02-14 14:41:22] 2025-02-14 13:41:07,016 | INFO     | maximum number of monitored processes: 6
[2025-02-14 14:41:22] 2025-02-14 13:41:07,016 | INFO     | aborting job monitoring since job object (job id=6512716166) has expired
[2025-02-14 14:41:22] 2025-02-14 13:41:07,253 | INFO     | 
[2025-02-14 14:41:22] 2025-02-14 13:41:07,253 | INFO     | job summary report
[2025-02-14 14:41:22] 2025-02-14 13:41:07,253 | INFO     | --------------------------------------------------
[2025-02-14 14:41:22] 2025-02-14 13:41:07,253 | INFO     | PanDA job id: 6512716166
[2025-02-14 14:41:22] 2025-02-14 13:41:07,253 | INFO     | task id: 43078919
[2025-02-14 14:41:22] 2025-02-14 13:41:07,253 | INFO     | errors: (none)
[2025-02-14 14:41:22] 2025-02-14 13:41:07,253 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-14 14:41:22] 2025-02-14 13:41:07,253 | INFO     | pilot state: finished 
[2025-02-14 14:41:22] 2025-02-14 13:41:07,253 | INFO     | transexitcode: 0
[2025-02-14 14:41:22] 2025-02-14 13:41:07,253 | INFO     | exeerrorcode: 0
[2025-02-14 14:41:22] 2025-02-14 13:41:07,254 | INFO     | exeerrordiag: 
[2025-02-14 14:41:22] 2025-02-14 13:41:07,254 | INFO     | exitcode: 0
[2025-02-14 14:41:22] 2025-02-14 13:41:07,254 | INFO     | exitmsg: OK
[2025-02-14 14:41:22] 2025-02-14 13:41:07,254 | INFO     | cpuconsumptiontime: 44991 s
[2025-02-14 14:41:22] 2025-02-14 13:41:07,254 | INFO     | nevents: 400
[2025-02-14 14:41:22] 2025-02-14 13:41:07,254 | INFO     | neventsw: 0
[2025-02-14 14:41:22] 2025-02-14 13:41:07,254 | INFO     | pid: 662976
[2025-02-14 14:41:22] 2025-02-14 13:41:07,254 | INFO     | pgrp: 662976
[2025-02-14 14:41:22] 2025-02-14 13:41:07,254 | INFO     | corecount: 4
[2025-02-14 14:41:22] 2025-02-14 13:41:07,254 | INFO     | event service: False
[2025-02-14 14:41:22] 2025-02-14 13:41:07,254 | INFO     | sizes: {0: 2394815, 1: 2395014, 3: 2395220, 11: 2395248, 11689: 2424550, 11690: 2433519, 11693: 2433703, 11698: 2433873}
[2025-02-14 14:41:22] 2025-02-14 13:41:07,254 | INFO     | --------------------------------------------------
[2025-02-14 14:41:22] 2025-02-14 13:41:07,254 | INFO     | 
[2025-02-14 14:41:22] 2025-02-14 13:41:07,254 | INFO     | executing command: ls -lF /var/lib/boinc_data/boinc-01/slots/2
[2025-02-14 14:41:22] 2025-02-14 13:41:07,272 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-14 14:41:22] 2025-02-14 13:41:07,272 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-14 14:41:22] 2025-02-14 13:41:07,272 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-14 14:41:22] 2025-02-14 13:41:07,272 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-14 14:41:22] 2025-02-14 13:41:07,272 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-14 14:41:22] 2025-02-14 13:41:07,272 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-14 14:41:22] 2025-02-14 13:41:07,272 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-14 14:41:22] 2025-02-14 13:41:07,272 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-14 14:41:22] 2025-02-14 13:41:07,273 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-14 14:41:22] 2025-02-14 13:41:07,273 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-14 14:41:22] 2025-02-14 13:41:07,273 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-14 14:41:22] 2025-02-14 13:41:07,273 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-14 14:41:22] 2025-02-14 13:41:07,273 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-14 14:41:22] 2025-02-14 13:41:07,273 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-14 14:41:22] 2025-02-14 13:41:07,273 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-14 14:41:22] 2025-02-14 13:41:07,273 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-14 14:41:22] 2025-02-14 13:41:07,273 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-14 14:41:22] 2025-02-14 13:41:07,273 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-14 14:41:22] 2025-02-14 13:41:07,273 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-14 14:41:22] 2025-02-14 13:41:07,273 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-14 14:41:22] 2025-02-14 13:41:07,273 | INFO     | job 6512716166 has completed (purged errors)
[2025-02-14 14:41:22] 2025-02-14 13:41:07,273 | INFO     | overall cleanup function is called
[2025-02-14 14:41:22] 2025-02-14 13:41:08,280 | INFO     | --- collectZombieJob: --- 10, [662976]
[2025-02-14 14:41:22] 2025-02-14 13:41:08,280 | INFO     | zombie collector waiting for pid 662976
[2025-02-14 14:41:22] 2025-02-14 13:41:08,280 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-14 14:41:22] 2025-02-14 13:41:08,280 | INFO     | collected zombie processes
[2025-02-14 14:41:22] 2025-02-14 13:41:08,280 | INFO     | will attempt to kill all subprocesses of pid=662976
[2025-02-14 14:41:22] 2025-02-14 13:41:08,331 | INFO     | process IDs to be killed: [662976] (in reverse order)
[2025-02-14 14:41:22] 2025-02-14 13:41:08,359 | WARNING  | found no corresponding commands to process id(s)
[2025-02-14 14:41:22] 2025-02-14 13:41:08,359 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-14 14:41:22] 2025-02-14 13:41:08,362 | INFO     | did not find any defunct processes belonging to 662976
[2025-02-14 14:41:22] 2025-02-14 13:41:08,364 | INFO     | did not find any defunct processes belonging to 662976
[2025-02-14 14:41:22] 2025-02-14 13:41:08,364 | INFO     | ready for new job
[2025-02-14 14:41:22] 2025-02-14 13:41:08,364 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-14 14:41:22] 2025-02-14 13:41:08,365 | INFO     | **************************************
[2025-02-14 14:41:22] 2025-02-14 13:41:08,365 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-14 14:41:22] 2025-02-14 13:41:08,365 | INFO     | **************************************
[2025-02-14 14:41:22] 2025-02-14 13:41:08,365 | INFO     | 
[2025-02-14 14:41:22] 2025-02-14 13:41:08,366 | INFO     | pilot is running in a VM
[2025-02-14 14:41:22] 2025-02-14 13:41:08,366 | INFO     | architecture information:
[2025-02-14 14:41:22] 2025-02-14 13:41:08,366 | INFO     | executing command: cat /etc/os-release
[2025-02-14 14:41:22] 2025-02-14 13:41:08,374 | INFO     | cat /etc/os-release:
[2025-02-14 14:41:22] NAME="CentOS Linux"
[2025-02-14 14:41:22] VERSION="7 (Core)"
[2025-02-14 14:41:22] ID="centos"
[2025-02-14 14:41:22] ID_LIKE="rhel fedora"
[2025-02-14 14:41:22] VERSION_ID="7"
[2025-02-14 14:41:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-14 14:41:22] ANSI_COLOR="0;31"
[2025-02-14 14:41:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-14 14:41:22] HOME_URL="https://www.centos.org/"
[2025-02-14 14:41:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-14 14:41:22] 
[2025-02-14 14:41:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-14 14:41:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-14 14:41:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-14 14:41:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-14 14:41:22] 
[2025-02-14 14:41:22] 2025-02-14 13:41:08,374 | INFO     | **************************************
[2025-02-14 14:41:22] 2025-02-14 13:41:08,877 | INFO     | executing command: df -mP /var/lib/boinc_data/boinc-01/slots/2
[2025-02-14 14:41:22] 2025-02-14 13:41:08,894 | INFO     | sufficient remaining disk space (23733469184 B)
[2025-02-14 14:41:22] 2025-02-14 13:41:08,894 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-14 14:41:22] 2025-02-14 13:41:08,894 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-14 14:41:22] 2025-02-14 13:41:08,895 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-14 14:41:22] 2025-02-14 13:41:08,895 | INFO     | found 0 job(s) in 20 queues
[2025-02-14 14:41:22] 2025-02-14 13:41:08,895 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-14 14:41:22] 2025-02-14 13:41:08,895 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-14 14:41:22] 2025-02-14 13:41:08,895 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-14 14:41:22] 2025-02-14 13:41:08,896 | INFO     | aborting loop
[2025-02-14 14:41:22] 2025-02-14 13:41:08,896 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-14 14:41:22] 2025-02-14 13:41:09,029 | INFO     | all payload control threads have been joined
[2025-02-14 14:41:22] 2025-02-14 13:41:09,222 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-14 14:41:22] 2025-02-14 13:41:09,364 | INFO     | all data control threads have been joined
[2025-02-14 14:41:22] 2025-02-14 13:41:09,840 | INFO     | all job control threads have been joined
[2025-02-14 14:41:22] 2025-02-14 13:41:09,899 | INFO     | [job] retrieve thread has finished
[2025-02-14 14:41:22] 2025-02-14 13:41:09,899 | INFO     | [job] queue monitor thread has finished
[2025-02-14 14:41:22] 2025-02-14 13:41:09,899 | INFO     | [job] job monitor thread has finished
[2025-02-14 14:41:22] 2025-02-14 13:41:10,035 | INFO     | [payload] control thread has finished
[2025-02-14 14:41:22] 2025-02-14 13:41:10,035 | INFO     | [job] validate thread has finished
[2025-02-14 14:41:22] 2025-02-14 13:41:10,369 | INFO     | [data] control thread has finished
[2025-02-14 14:41:22] 2025-02-14 13:41:10,640 | INFO     | [payload] execute_payloads thread has finished
[2025-02-14 14:41:22] 2025-02-14 13:41:10,643 | INFO     | [payload] failed_post thread has finished
[2025-02-14 14:41:22] 2025-02-14 13:41:10,655 | INFO     | [data] copytool_in thread has finished
[2025-02-14 14:41:22] 2025-02-14 13:41:10,843 | INFO     | [job] control thread has finished
[2025-02-14 14:41:22] 2025-02-14 13:41:10,998 | INFO     | [payload] validate_pre thread has finished
[2025-02-14 14:41:22] 2025-02-14 13:41:11,009 | INFO     | [job] create_data_payload thread has finished
[2025-02-14 14:41:22] 2025-02-14 13:41:11,224 | INFO     | [data] copytool_out thread has finished
[2025-02-14 14:41:22] 2025-02-14 13:41:11,399 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-14 14:41:22] 2025-02-14 13:41:11,497 | INFO     | [payload] validate_post thread has finished
[2025-02-14 14:41:22] 2025-02-14 13:41:11,963 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-14 14:41:22] 2025-02-14 13:41:15,970 | INFO     | [data] queue_monitor thread has finished
[2025-02-14 14:41:22] 2025-02-14 13:41:17,581 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 133235873654592)>', '<ExcThread(monitor, started 133235510085376)>']
[2025-02-14 14:41:22] 2025-02-14 13:41:17,932 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-14 14:41:22] 2025-02-14 13:41:17,932 | INFO     | [monitor] control thread has ended
[2025-02-14 14:41:22] 2025-02-14 13:41:22,606 | INFO     | all workflow threads have been joined
[2025-02-14 14:41:22] 2025-02-14 13:41:22,607 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-14 14:41:22] 2025-02-14 13:41:22,607 | INFO     | traces error code: 0
[2025-02-14 14:41:22] 2025-02-14 13:41:22,608 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-14 14:41:22] 2025-02-14 13:41:22,694 [wrapper] ==== pilot stdout END ====
[2025-02-14 14:41:22] 2025-02-14 13:41:22,699 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-14 14:41:22] 2025-02-14 13:41:22,704 [wrapper] pilotpid: 656434
[2025-02-14 14:41:22] 2025-02-14 13:41:22,709 [wrapper] Pilot exit status: 0
[2025-02-14 14:41:22] 2025-02-14 13:41:22,726 [wrapper] pandaids: 6512716166
[2025-02-14 14:41:22] 2025-02-14 13:41:22,758 [wrapper] cleanup supervisor_pilot  757668 656435
[2025-02-14 14:41:22] 2025-02-14 13:41:22,762 [wrapper] Test setup, not cleaning
[2025-02-14 14:41:22] 2025-02-14 13:41:22,770 [wrapper] apfmon messages muted
[2025-02-14 14:41:22] 2025-02-14 13:41:22,775 [wrapper] ==== wrapper stdout END ====
[2025-02-14 14:41:22] 2025-02-14 13:41:22,779 [wrapper] ==== wrapper stderr END ====
[2025-02-14 14:41:22]  *** Error codes and diagnostics ***
[2025-02-14 14:41:22]     "exeErrorCode": 0,
[2025-02-14 14:41:22]     "exeErrorDiag": "",
[2025-02-14 14:41:22]     "pilotErrorCode": 0,
[2025-02-14 14:41:22]     "pilotErrorDiag": "",
[2025-02-14 14:41:22]  *** Listing of results directory ***
[2025-02-14 14:41:22] insgesamt 664532
[2025-02-14 14:41:22] -rw-r--r-- 1 yeti boinc    491065 Feb 14 00:45 pilot3.tar.gz
[2025-02-14 14:41:22] -rwx------ 1 yeti boinc     34924 Feb 14 00:56 runpilot2-wrapper.sh
[2025-02-14 14:41:22] -rw-r--r-- 1 yeti boinc      5118 Feb 14 00:56 queuedata.json
[2025-02-14 14:41:22] -rw-r--r-- 1 yeti boinc       100 Feb 14 11:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-14 14:41:22] -rwxr-xr-x 1 yeti boinc      7986 Feb 14 11:25 run_atlas
[2025-02-14 14:41:22] -rw-r--r-- 1 yeti boinc       105 Feb 14 11:25 job.xml
[2025-02-14 14:41:22] -rw-r--r-- 1 yeti boinc      6676 Feb 14 11:25 init_data.xml
[2025-02-14 14:41:22] -rw-r--r-- 2 yeti boinc 340748977 Feb 14 11:25 EVNT.43078917._001053.pool.root.1
[2025-02-14 14:41:22] -rw-r--r-- 2 yeti boinc     17569 Feb 14 11:25 start_atlas.sh
[2025-02-14 14:41:22] drwxrwx--x 2 yeti boinc      4096 Feb 14 11:25 shared
[2025-02-14 14:41:22] -rw-r--r-- 2 yeti boinc    503497 Feb 14 11:25 input.tar.gz
[2025-02-14 14:41:22] -rw-r--r-- 1 yeti boinc         0 Feb 14 11:25 boinc_lockfile
[2025-02-14 14:41:22] -rw-r--r-- 1 yeti boinc      2548 Feb 14 11:25 pandaJob.out
[2025-02-14 14:41:22] -rw------- 1 yeti boinc       462 Feb 14 11:25 setup.sh.local
[2025-02-14 14:41:22] -rw------- 1 yeti boinc    986937 Feb 14 11:25 agis_schedconf.cvmfs.json
[2025-02-14 14:41:22] drwx------ 4 yeti boinc      4096 Feb 14 11:25 pilot3
[2025-02-14 14:41:22] -rw-r--r-- 1 yeti boinc       531 Feb 14 14:40 boinc_task_state.xml
[2025-02-14 14:41:22] -rw------- 1 yeti boinc 332902766 Feb 14 14:40 HITS.43078919._038256.pool.root.1
[2025-02-14 14:41:22] -rw------- 1 yeti boinc        95 Feb 14 14:40 pilot_heartbeat.json
[2025-02-14 14:41:22] -rw------- 1 yeti boinc      1029 Feb 14 14:40 memory_monitor_summary.json
[2025-02-14 14:41:22] -rw------- 1 yeti boinc   1591814 Feb 14 14:40 agis_ddmendpoints.agis.ALL.json
[2025-02-14 14:41:22] -rw------- 1 yeti boinc    309139 Feb 14 14:40 log.43078919._038256.job.log.tgz.1
[2025-02-14 14:41:22] -rw------- 1 yeti boinc      7695 Feb 14 14:41 heartbeat.json
[2025-02-14 14:41:22] -rw-r--r-- 1 yeti boinc        28 Feb 14 14:41 wrapper_checkpoint.txt
[2025-02-14 14:41:22] -rw-r--r-- 1 yeti boinc      8192 Feb 14 14:41 boinc_mmap_file
[2025-02-14 14:41:22] -rw------- 1 yeti boinc      4414 Feb 14 14:41 pilotlog.txt
[2025-02-14 14:41:22] -rw------- 1 yeti boinc   1198758 Feb 14 14:41 log.43078919._038256.job.log.1
[2025-02-14 14:41:22] -rw------- 1 yeti boinc       357 Feb 14 14:41 output.list
[2025-02-14 14:41:22] -rw-r--r-- 1 yeti boinc       620 Feb 14 14:41 runtime_log
[2025-02-14 14:41:22] -rw------- 1 yeti boinc   1525760 Feb 14 14:41 result.tar.gz
[2025-02-14 14:41:22] -rw-r--r-- 1 yeti boinc     11617 Feb 14 14:41 runtime_log.err
[2025-02-14 14:41:22] -rw------- 1 yeti boinc       643 Feb 14 14:41 9HKNDmeFy26nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmexbKDmBMhDpm.diag
[2025-02-14 14:41:22] -rw-r--r-- 1 yeti boinc     21338 Feb 14 14:41 stderr.txt
[2025-02-14 14:41:22] HITS file was successfully produced:
[2025-02-14 14:41:22] -rw------- 1 yeti boinc 332902766 Feb 14 14:40 shared/HITS.pool.root.1
[2025-02-14 14:41:22]  *** Contents of shared directory: ***
[2025-02-14 14:41:22] insgesamt 659880
[2025-02-14 14:41:22] -rw-r--r-- 2 yeti boinc 340748977 Feb 14 11:25 ATLAS.root_0
[2025-02-14 14:41:22] -rw-r--r-- 2 yeti boinc     17569 Feb 14 11:25 start_atlas.sh
[2025-02-14 14:41:22] -rw-r--r-- 2 yeti boinc    503497 Feb 14 11:25 input.tar.gz
[2025-02-14 14:41:22] -rw------- 1 yeti boinc 332902766 Feb 14 14:40 HITS.pool.root.1
[2025-02-14 14:41:22] -rw------- 1 yeti boinc   1525760 Feb 14 14:41 result.tar.gz
14:41:24 (652697): run_atlas exited; CPU time 45021.331984
14:41:24 (652697): called boinc_finish(0)

</stderr_txt>
]]>

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