Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-02-15 07:43:52 (39576): Detected: vboxwrapper 26206
2025-02-15 07:43:52 (39576): Detected: BOINC client v8.0.2
2025-02-15 07:43:53 (39576): Detected: VirtualBox VboxManage Interface (Version: 7.0.12)
2025-02-15 07:43:53 (39576): Successfully copied 'init_data.xml' to the shared directory.
2025-02-15 07:44:39 (39576): Error: Timeout
2025-02-15 07:44:39 (39576): ERROR: VM failed to start
2025-02-15 07:44:44 (39576): 
   BOINC will be notified that it needs to clean up the environment.
         This is a temporary problem and so this job will be rescheduled for another time.

2025-02-17 09:57:20 (21552): Detected: vboxwrapper 26206
2025-02-17 09:57:20 (21552): Detected: BOINC client v8.0.2
2025-02-17 09:57:20 (21552): Detected: VirtualBox VboxManage Interface (Version: 7.0.12)
2025-02-17 09:57:21 (21552): Create VM. (boinc_42e9c47b08e6abcf, slot#341)
2025-02-17 09:57:21 (21552): Setting Memory Size for VM. (4800MB)
2025-02-17 09:57:22 (21552): Setting CPU Count for VM. (8)
2025-02-17 09:57:22 (21552): Setting Chipset Options for VM.
2025-02-17 09:57:22 (21552): Setting Graphics Controller Options for VM.
2025-02-17 09:57:22 (21552): Setting Boot Options for VM.
2025-02-17 09:57:23 (21552): Setting Network Configuration for NAT.
2025-02-17 09:57:23 (21552): Enabling VM Network Access.
2025-02-17 09:57:23 (21552): Disabling USB Support for VM.
2025-02-17 09:57:23 (21552): Disabling COM Port Support for VM.
2025-02-17 09:57:24 (21552): Disabling LPT Port Support for VM.
2025-02-17 09:57:24 (21552): Disabling Audio Support for VM.
2025-02-17 09:57:24 (21552): Disabling Clipboard Support for VM.
2025-02-17 09:57:24 (21552): Disabling Drag and Drop Support for VM.
2025-02-17 09:57:25 (21552): Adding storage controller(s) to VM.
2025-02-17 09:57:25 (21552): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-02-17 09:57:26 (21552): Adding VirtualBox Guest Additions to VM.
2025-02-17 09:57:26 (21552): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-02-17 09:57:26 (21552): forwarding host port 53823 to guest port 80
2025-02-17 09:57:26 (21552): Enabling remote desktop for VM.
2025-02-17 09:57:27 (21552): Required extension pack not installed, remote desktop not enabled.
2025-02-17 09:57:27 (21552): Enabling shared directory for VM.
2025-02-17 09:57:27 (21552): Starting VM using VBoxManage interface. (boinc_42e9c47b08e6abcf, slot#341)
2025-02-17 09:57:31 (21552): Successfully started VM. (PID = '23904')
2025-02-17 09:57:31 (21552): Reporting VM Process ID to BOINC.
2025-02-17 09:57:31 (21552): Guest Log: BIOS: VirtualBox 7.0.12
2025-02-17 09:57:31 (21552): Guest Log: CPUID EDX: 0x178bfbff
2025-02-17 09:57:31 (21552): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-02-17 09:57:31 (21552): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-02-17 09:57:31 (21552): VM state change detected. (old = 'poweredoff', new = 'running')
2025-02-17 09:57:31 (21552): Detected: Web Application Enabled (http://localhost:53823)
2025-02-17 09:57:31 (21552): Preference change detected
2025-02-17 09:57:31 (21552): Setting CPU throttle for VM. (90%)
2025-02-17 09:57:32 (21552): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-02-17 09:57:33 (21552): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-02-17 09:57:33 (21552): Guest Log: BIOS: Booting from Hard Disk...
2025-02-17 09:57:35 (21552): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-02-17 09:57:35 (21552): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-02-17 09:57:35 (21552): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-02-17 09:57:35 (21552): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-02-17 09:57:35 (21552): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-02-17 09:57:35 (21552): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-02-17 09:57:35 (21552): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-02-17 09:57:35 (21552): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-02-17 09:57:35 (21552): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-02-17 09:57:35 (21552): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-02-17 09:57:35 (21552): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-02-17 09:57:35 (21552): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-02-17 09:57:35 (21552): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-02-17 09:57:35 (21552): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-02-17 09:57:35 (21552): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-02-17 09:57:35 (21552): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-02-17 09:57:35 (21552): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-02-17 09:57:35 (21552): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-02-17 09:57:35 (21552): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-02-17 09:57:35 (21552): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-02-17 09:57:35 (21552): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-02-17 09:57:35 (21552): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-02-17 09:57:35 (21552): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-02-17 09:57:35 (21552): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-02-17 09:57:35 (21552): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-02-17 09:57:35 (21552): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-02-17 09:57:35 (21552): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-02-17 09:57:35 (21552): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-02-17 09:57:35 (21552): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-02-17 09:57:35 (21552): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-02-17 09:57:36 (21552): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-02-17 09:57:36 (21552): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-02-17 09:57:44 (21552): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-02-17 09:57:44 (21552): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-02-17 09:57:46 (21552): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-02-17 09:57:46 (21552): Guest Log: 00:00:00.000074 main     Log opened 2025-02-17T09:57:44.503750000Z
2025-02-17 09:57:46 (21552): Guest Log: 00:00:00.000138 main     OS Product: Linux
2025-02-17 09:57:46 (21552): Guest Log: 00:00:00.000155 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-02-17 09:57:46 (21552): Guest Log: 00:00:00.000166 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-02-17 09:57:46 (21552): Guest Log: 00:00:00.000179 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-02-17 09:57:46 (21552): Guest Log: 00:00:00.000180 main     Process ID: 1362
2025-02-17 09:57:46 (21552): Guest Log: 00:00:00.000180 main     Package type: LINUX_64BITS_GENERIC
2025-02-17 09:57:46 (21552): Guest Log: 00:00:00.000732 main     5.2.32 r132073 started. Verbose level = 0
2025-02-17 09:57:46 (21552): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-02-17 09:57:46 (21552): Guest Log: [INFO] Mounting shared directory
2025-02-17 09:57:46 (21552): Guest Log: [INFO] Checking for init_data.xml
2025-02-17 09:57:55 (21552): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-02-17 09:57:55 (21552): Guest Log: [INFO] Detected branch: prod
2025-02-17 09:57:55 (21552): Guest Log: This is the prod version of the ATLAS job wrapper
2025-02-17 09:57:55 (21552): Guest Log: Copying input files
2025-02-17 09:57:55 (21552): Guest Log: Copied input files into RunAtlas.
2025-02-17 09:57:55 (21552): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-02-17 09:57:55 (21552): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-02-17 09:57:55 (21552): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-02-17 09:57:55 (21552): Guest Log: Further information can be found at the LHC@home message board.
2025-02-17 09:57:56 (21552): Guest Log: 00:00:10.008764 timesync vgsvcTimeSyncWorker: Radical guest time change: 25 212 192 310 000ns (GuestNow=1 739 811 476 697 356 000 ns GuestLast=1 739 786 264 505 046 000 ns fSetTimeLastLoop=true )
2025-02-17 09:58:15 (21552): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-02-17 09:58:16 (21552): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-02-17 09:58:16 (21552): Guest Log: 2.6.3.0 1645 0 30180 142756 4 1 3117296 4096000 0 65024 0 0 n/a 0 0 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-02-17 09:58:16 (21552): Guest Log: copied the webapp to /var/www
2025-02-17 09:58:16 (21552): Guest Log: ATHENA_PROC_NUMBER=8
2025-02-17 09:58:16 (21552): Guest Log: ATHENA_CORE_NUMBER=8
2025-02-17 09:58:18 (21552): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-02-17 09:58:18 (21552): Guest Log:  *** Starting ATLAS job. (PandaID=6512639230 taskID=43092792) ***
2025-02-17 11:49:40 (21552): Status Report: Elapsed Time: '6000.992798'
2025-02-17 11:49:40 (21552): Status Report: CPU Time: '21351.921875'
2025-02-17 13:42:19 (21552): Status Report: Elapsed Time: '12001.571091'
2025-02-17 13:42:19 (21552): Status Report: CPU Time: '47473.203125'
2025-02-17 15:36:50 (21552): Status Report: Elapsed Time: '18001.833355'
2025-02-17 15:36:50 (21552): Status Report: CPU Time: '73980.234375'
2025-02-17 16:32:32 (21552): Guest Log:  *** Job finished ***
2025-02-17 16:32:32 (21552): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-02-17 16:32:32 (21552): Guest Log: 2025-02-17 23:32:21,901 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
2025-02-17 16:32:32 (21552): Guest Log: 2025-02-17 23:32:22,908 | INFO     | [job] queue monitor thread has finished
2025-02-17 16:32:32 (21552): Guest Log: 2025-02-17 23:32:23,055 | INFO     | [data] queue_monitor thread has finished
2025-02-17 16:32:32 (21552): Guest Log: 2025-02-17 23:32:24,363 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139831699191616)>', '<ExcThread(monitor, started 139831023748864)>']
2025-02-17 16:32:32 (21552): Guest Log: 2025-02-17 23:32:24,914 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-02-17 16:32:32 (21552): Guest Log: 2025-02-17 23:32:24,914 | INFO     | [monitor] control thread has ended
2025-02-17 16:32:32 (21552): Guest Log: 2025-02-17 23:32:29,372 | INFO     | all workflow threads have been joined
2025-02-17 16:32:32 (21552): Guest Log: 2025-02-17 23:32:29,372 | INFO     | end of generic workflow (traces error code: 0)
2025-02-17 16:32:32 (21552): Guest Log: 2025-02-17 23:32:29,372 | INFO     | traces error code: 0
2025-02-17 16:32:32 (21552): Guest Log: 2025-02-17 23:32:29,373 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-02-17 16:32:32 (21552): Guest Log: 2025-02-17 23:32:29,486 [wrapper] ==== pilot stdout END ====
2025-02-17 16:32:32 (21552): Guest Log: 2025-02-17 23:32:29,529 [wrapper] ==== wrapper stdout RESUME ====
2025-02-17 16:32:32 (21552): Guest Log: 2025-02-17 23:32:29,576 [wrapper] pilotpid: 6027
2025-02-17 16:32:32 (21552): Guest Log: 2025-02-17 23:32:29,595 [wrapper] Pilot exit status: 0
2025-02-17 16:32:32 (21552): Guest Log: 2025-02-17 23:32:29,742 [wrapper] pandaids: 6512639230
2025-02-17 16:32:32 (21552): Guest Log: 2025-02-17 23:32:29,912 [wrapper] cleanup supervisor_pilot 26087 6028
2025-02-17 16:32:32 (21552): Guest Log: 2025-02-17 23:32:29,939 [wrapper] Test setup, not cleaning
2025-02-17 16:32:32 (21552): Guest Log: 2025-02-17 23:32:29,986 [wrapper] apfmon messages muted
2025-02-17 16:32:32 (21552): Guest Log: 2025-02-17 23:32:30,011 [wrapper] ==== wrapper stdout END ====
2025-02-17 16:32:32 (21552): Guest Log: 2025-02-17 23:32:30,066 [wrapper] ==== wrapper stderr END ====
2025-02-17 16:32:32 (21552): Guest Log:  *** Error codes and diagnostics ***
2025-02-17 16:32:32 (21552): Guest Log:     "exeErrorCode": 0,
2025-02-17 16:32:32 (21552): Guest Log:     "exeErrorDiag": "",
2025-02-17 16:32:32 (21552): Guest Log:     "pilotErrorCode": 0,
2025-02-17 16:32:32 (21552): Guest Log:     "pilotErrorDiag": "",
2025-02-17 16:32:32 (21552): Guest Log:  *** Listing of results directory ***
2025-02-17 16:32:32 (21552): Guest Log: total 359840
2025-02-17 16:32:32 (21552): Guest Log: -rw-r--r--. 1 atlas atlas    491065 Feb 13 21:04 pilot3.tar.gz
2025-02-17 16:32:32 (21552): Guest Log: -rwx------. 1 atlas atlas     34924 Feb 13 21:14 runpilot2-wrapper.sh
2025-02-17 16:32:32 (21552): Guest Log: -rw-r--r--. 1 atlas atlas      5118 Feb 13 21:14 queuedata.json
2025-02-17 16:32:32 (21552): Guest Log: -rwxr-xr-x. 1 atlas atlas      9039 Feb 17 16:57 init_data.xml
2025-02-17 16:32:32 (21552): Guest Log: -rwxr-xr-x. 1 atlas atlas    503496 Feb 17 16:57 input.tar.gz
2025-02-17 16:32:32 (21552): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Feb 17 16:57 start_atlas.sh
2025-02-17 16:32:32 (21552): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb 17 16:57 EVNT.43092790._000036.pool.root.1 -> /data/./ATLAS.root_0
2025-02-17 16:32:32 (21552): Guest Log: -rw-r--r--. 1 atlas atlas      2552 Feb 17 16:58 pandaJob.out
2025-02-17 16:32:32 (21552): Guest Log: -rw-------. 1 atlas atlas       424 Feb 17 16:58 setup.sh.local
2025-02-17 16:32:32 (21552): Guest Log: -rw-------. 1 atlas atlas    985718 Feb 17 16:59 agis_schedconf.cvmfs.json
2025-02-17 16:32:32 (21552): Guest Log: drwx------. 4 atlas atlas      4096 Feb 17 16:59 pilot3
2025-02-17 16:32:32 (21552): Guest Log: -rw-------. 1 atlas atlas 360521433 Feb 17 23:31 HITS.43092792._002247.pool.root.1
2025-02-17 16:32:32 (21552): Guest Log: -rw-------. 1 atlas atlas      1033 Feb 17 23:31 memory_monitor_summary.json
2025-02-17 16:32:32 (21552): Guest Log: -rw-------. 1 atlas atlas   1593946 Feb 17 23:31 agis_ddmendpoints.agis.ALL.json
2025-02-17 16:32:32 (21552): Guest Log: -rw-------. 1 atlas atlas    451550 Feb 17 23:31 log.43092792._002247.job.log.tgz.1
2025-02-17 16:32:32 (21552): Guest Log: -rw-------. 1 atlas atlas        95 Feb 17 23:32 pilot_heartbeat.json
2025-02-17 16:32:32 (21552): Guest Log: -rw-------. 1 atlas atlas      7734 Feb 17 23:32 heartbeat.json
2025-02-17 16:32:32 (21552): Guest Log: -rw-------. 1 atlas atlas      4275 Feb 17 23:32 pilotlog.txt
2025-02-17 16:32:32 (21552): Guest Log: -rw-------. 1 atlas atlas   1651788 Feb 17 23:32 log.43092792._002247.job.log.1
2025-02-17 16:32:32 (21552): Guest Log: -rw-------. 1 atlas atlas       357 Feb 17 23:32 output.list
2025-02-17 16:32:32 (21552): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb 17 23:32 runtime_log
2025-02-17 16:32:32 (21552): Guest Log: -rw-------. 1 atlas atlas   2119680 Feb 17 23:32 result.tar.gz
2025-02-17 16:32:32 (21552): Guest Log: -rw-------. 1 atlas atlas       671 Feb 17 23:32 xkSNDm1iv26n9Rq4apOajLDm4fhM0noT9bVoFjIUDmTiSKDmzeNq6n.diag
2025-02-17 16:32:32 (21552): Guest Log: -rw-r--r--. 1 atlas atlas     10972 Feb 17 23:32 runtime_log.err
2025-02-17 16:32:32 (21552): Guest Log: Looking for outputfile HITS.43092792._002247.pool.root.1
2025-02-17 16:32:32 (21552): Guest Log: HITS file was successfully produced
2025-02-17 16:32:32 (21552): Guest Log: -rw-------. 1 atlas atlas 360521433 Feb 17 23:31 /home/atlas/RunAtlas/HITS.43092792._002247.pool.root.1
2025-02-17 16:32:35 (21552): Guest Log: Successfully finished the ATLAS job!
2025-02-17 16:32:35 (21552): Guest Log: Copying the results back to the shared directory!
2025-02-17 16:32:35 (21552): Guest Log:  *** Contents of shared directory: ***
2025-02-17 16:32:35 (21552): Guest Log: total 691168
2025-02-17 16:32:35 (21552): Guest Log: -rwxrwxrwx. 1 root root 344574946 Feb 15 14:43 ATLAS.root_0
2025-02-17 16:32:35 (21552): Guest Log: -rwxrwxrwx. 1 root root 360521433 Feb 17 23:32 HITS.pool.root.1
2025-02-17 16:32:35 (21552): Guest Log: -rwxrwxrwx. 1 root root      9039 Feb 15 14:43 init_data.xml
2025-02-17 16:32:35 (21552): Guest Log: -rwxrwxrwx. 1 root root    503496 Feb 14 00:36 input.tar.gz
2025-02-17 16:32:35 (21552): Guest Log: -rwxrwxrwx. 1 root root   2119680 Feb 17 23:32 result.tar.gz
2025-02-17 16:32:35 (21552): Guest Log: -rwxrwxrwx. 1 root root     17569 Feb 14 00:36 start_atlas.sh
2025-02-17 16:32:35 (21552): Guest Log:  *** Success! Shutting down the machine. ***
2025-02-17 16:32:35 (21552): VM Completion File Detected.
2025-02-17 16:32:35 (21552): Powering off VM.
2025-02-17 16:32:35 (21552): Successfully stopped VM.
2025-02-17 16:32:35 (21552): Deregistering VM. (boinc_42e9c47b08e6abcf, slot#341)
2025-02-17 16:32:36 (21552): Removing network bandwidth throttle group from VM.
2025-02-17 16:32:36 (21552): Removing VM from VirtualBox.
16:32:42 (21552): called boinc_finish(0)

</stderr_txt>
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