Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-02-13 11:08:28 (596): Detected: vboxwrapper 26206
2025-02-13 11:08:28 (596): Detected: BOINC client v8.0.2
2025-02-13 11:08:29 (596): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-02-13 11:08:29 (596): Successfully copied 'init_data.xml' to the shared directory.
2025-02-13 11:08:29 (596): Create VM. (boinc_0986a7794490c0f4, slot#13)
2025-02-13 11:08:30 (596): Setting Memory Size for VM. (4800MB)
2025-02-13 11:08:30 (596): Setting CPU Count for VM. (8)
2025-02-13 11:08:30 (596): Setting Chipset Options for VM.
2025-02-13 11:08:31 (596): Setting Graphics Controller Options for VM.
2025-02-13 11:08:31 (596): Setting Boot Options for VM.
2025-02-13 11:08:31 (596): Setting Network Configuration for NAT.
2025-02-13 11:08:32 (596): Enabling VM Network Access.
2025-02-13 11:08:32 (596): Disabling USB Support for VM.
2025-02-13 11:08:32 (596): Disabling COM Port Support for VM.
2025-02-13 11:08:32 (596): Disabling LPT Port Support for VM.
2025-02-13 11:08:33 (596): Disabling Audio Support for VM.
2025-02-13 11:08:33 (596): Disabling Clipboard Support for VM.
2025-02-13 11:08:33 (596): Disabling Drag and Drop Support for VM.
2025-02-13 11:08:34 (596): Adding storage controller(s) to VM.
2025-02-13 11:08:34 (596): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-02-13 11:08:37 (596): Adding VirtualBox Guest Additions to VM.
2025-02-13 11:08:37 (596): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-02-13 11:08:37 (596): forwarding host port 60208 to guest port 80
2025-02-13 11:08:38 (596): Enabling remote desktop for VM.
2025-02-13 11:08:38 (596): Required extension pack not installed, remote desktop not enabled.
2025-02-13 11:08:38 (596): Enabling shared directory for VM.
2025-02-13 11:08:38 (596): Starting VM using VBoxManage interface. (boinc_0986a7794490c0f4, slot#13)
2025-02-13 11:08:44 (596): Successfully started VM. (PID = '4252')
2025-02-13 11:08:44 (596): Reporting VM Process ID to BOINC.
2025-02-13 11:08:44 (596): Guest Log: BIOS: VirtualBox 7.0.6
2025-02-13 11:08:44 (596): Guest Log: CPUID EDX: 0x178bfbff
2025-02-13 11:08:44 (596): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-02-13 11:08:44 (596): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-02-13 11:08:44 (596): VM state change detected. (old = 'poweredoff', new = 'running')
2025-02-13 11:08:44 (596): Detected: Web Application Enabled (http://localhost:60208)
2025-02-13 11:08:44 (596): Preference change detected
2025-02-13 11:08:44 (596): Setting CPU throttle for VM. (90%)
2025-02-13 11:08:44 (596): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-02-13 11:08:46 (596): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-02-13 11:08:46 (596): Guest Log: BIOS: Booting from Hard Disk...
2025-02-13 11:08:48 (596): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-02-13 11:08:48 (596): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-02-13 11:08:48 (596): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-02-13 11:08:48 (596): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-02-13 11:08:48 (596): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-02-13 11:08:48 (596): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-02-13 11:08:48 (596): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-02-13 11:08:48 (596): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-02-13 11:08:48 (596): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-02-13 11:08:48 (596): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-02-13 11:08:48 (596): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-02-13 11:08:48 (596): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-02-13 11:08:48 (596): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-02-13 11:08:48 (596): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-02-13 11:08:48 (596): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-02-13 11:08:48 (596): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-02-13 11:08:48 (596): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-02-13 11:08:48 (596): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-02-13 11:08:48 (596): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-02-13 11:08:48 (596): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-02-13 11:08:48 (596): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-02-13 11:08:48 (596): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-02-13 11:08:48 (596): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-02-13 11:08:48 (596): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-02-13 11:08:48 (596): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-02-13 11:08:48 (596): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-02-13 11:08:48 (596): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-02-13 11:08:48 (596): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-02-13 11:08:48 (596): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-02-13 11:08:48 (596): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-02-13 11:08:48 (596): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-02-13 11:08:48 (596): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-02-13 11:09:43 (596): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-02-13 11:09:43 (596): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-02-13 11:09:46 (596): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-02-13 11:09:46 (596): Guest Log: 00:00:00.000108 main     Log opened 2025-02-13T11:09:45.019402000Z
2025-02-13 11:09:46 (596): Guest Log: 00:00:00.000169 main     OS Product: Linux
2025-02-13 11:09:46 (596): Guest Log: 00:00:00.000185 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-02-13 11:09:46 (596): Guest Log: 00:00:00.000290 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-02-13 11:09:46 (596): Guest Log: 00:00:00.000335 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-02-13 11:09:46 (596): Guest Log: 00:00:00.000336 main     Process ID: 928
2025-02-13 11:09:46 (596): Guest Log: 00:00:00.000336 main     Package type: LINUX_64BITS_GENERIC
2025-02-13 11:09:46 (596): Guest Log: 00:00:00.000952 main     5.2.32 r132073 started. Verbose level = 0
2025-02-13 11:09:56 (596): Guest Log: 00:00:10.003551 timesync vgsvcTimeSyncWorker: Radical guest time change: 28 759 517 520 000ns (GuestNow=1 739 473 744 538 556 000 ns GuestLast=1 739 444 985 021 036 000 ns fSetTimeLastLoop=true )
2025-02-13 11:10:14 (596): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-02-13 11:10:14 (596): Guest Log: [INFO] Mounting shared directory
2025-02-13 11:10:14 (596): Guest Log: [INFO] Checking for init_data.xml
2025-02-13 11:10:33 (596): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-02-13 11:10:33 (596): Guest Log: [INFO] Detected branch: prod
2025-02-13 11:10:33 (596): Guest Log: This is the prod version of the ATLAS job wrapper
2025-02-13 11:10:33 (596): Guest Log: Copying input files
2025-02-13 11:10:35 (596): Guest Log: Copied input files into RunAtlas.
2025-02-13 11:10:35 (596): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-02-13 11:10:35 (596): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-02-13 11:10:35 (596): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-02-13 11:10:35 (596): Guest Log: Further information can be found at the LHC@home message board.
2025-02-13 11:10:44 (596): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-02-13 11:10:44 (596): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-02-13 11:10:44 (596): Guest Log: 2.6.3.0 1683 0 32212 142612 4 1 3117296 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-02-13 11:10:44 (596): Guest Log: copied the webapp to /var/www
2025-02-13 11:10:44 (596): Guest Log: ATHENA_PROC_NUMBER=8
2025-02-13 11:10:44 (596): Guest Log: ATHENA_CORE_NUMBER=8
2025-02-13 11:10:44 (596): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-02-13 11:10:44 (596): Guest Log:  *** Starting ATLAS job. (PandaID=6512430553 taskID=43078919) ***
2025-02-13 12:49:07 (596): Status Report: Elapsed Time: '6000.000000'
2025-02-13 12:49:07 (596): Status Report: CPU Time: '33964.578125'
2025-02-13 14:13:33 (596): Guest Log:  *** Job finished ***
2025-02-13 14:13:33 (596): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-02-13 14:13:33 (596): Guest Log: 2025-02-13 22:12:33,182 | INFO     | [payload] execute_payloads thread has finished
2025-02-13 14:13:33 (596): Guest Log: 2025-02-13 22:12:33,506 | INFO     | [data] copytool_out thread has finished
2025-02-13 14:13:33 (596): Guest Log: 2025-02-13 22:12:36,611 | INFO     | [data] queue_monitor thread has finished
2025-02-13 14:13:33 (596): Guest Log: 2025-02-13 22:12:38,626 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140616229668672)>', '<ExcThread(monitor, started 140615199217408)>']
2025-02-13 14:13:33 (596): Guest Log: 2025-02-13 22:12:39,024 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-02-13 14:13:33 (596): Guest Log: 2025-02-13 22:12:39,024 | INFO     | [monitor] control thread has ended
2025-02-13 14:13:33 (596): Guest Log: 2025-02-13 22:12:43,778 | INFO     | all workflow threads have been joined
2025-02-13 14:13:33 (596): Guest Log: 2025-02-13 22:12:43,778 | INFO     | end of generic workflow (traces error code: 0)
2025-02-13 14:13:33 (596): Guest Log: 2025-02-13 22:12:43,778 | INFO     | traces error code: 0
2025-02-13 14:13:33 (596): Guest Log: 2025-02-13 22:12:43,779 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-02-13 14:13:33 (596): Guest Log: 2025-02-13 22:12:43,857 [wrapper] ==== pilot stdout END ====
2025-02-13 14:13:33 (596): Guest Log: 2025-02-13 22:12:43,860 [wrapper] ==== wrapper stdout RESUME ====
2025-02-13 14:13:33 (596): Guest Log: 2025-02-13 22:12:43,863 [wrapper] pilotpid: 6067
2025-02-13 14:13:33 (596): Guest Log: 2025-02-13 22:12:43,866 [wrapper] Pilot exit status: 0
2025-02-13 14:13:33 (596): Guest Log: 2025-02-13 22:12:43,928 [wrapper] pandaids: 6512430553
2025-02-13 14:13:33 (596): Guest Log: 2025-02-13 22:12:43,949 [wrapper] cleanup supervisor_pilot 12245 6068
2025-02-13 14:13:33 (596): Guest Log: 2025-02-13 22:12:43,952 [wrapper] Test setup, not cleaning
2025-02-13 14:13:33 (596): Guest Log: 2025-02-13 22:12:43,959 [wrapper] apfmon messages muted
2025-02-13 14:13:33 (596): Guest Log: 2025-02-13 22:12:43,963 [wrapper] ==== wrapper stdout END ====
2025-02-13 14:13:33 (596): Guest Log: 2025-02-13 22:12:43,966 [wrapper] ==== wrapper stderr END ====
2025-02-13 14:13:33 (596): Guest Log:  *** Error codes and diagnostics ***
2025-02-13 14:13:33 (596): Guest Log:     "exeErrorCode": 0,
2025-02-13 14:13:33 (596): Guest Log:     "exeErrorDiag": "",
2025-02-13 14:13:33 (596): Guest Log:     "pilotErrorCode": 0,
2025-02-13 14:13:33 (596): Guest Log:     "pilotErrorDiag": "",
2025-02-13 14:13:33 (596): Guest Log:  *** Listing of results directory ***
2025-02-13 14:13:33 (596): Guest Log: total 327496
2025-02-13 14:13:33 (596): Guest Log: -rw-r--r--. 1 atlas atlas    491065 Feb 13 16:08 pilot3.tar.gz
2025-02-13 14:13:33 (596): Guest Log: -rwx------. 1 atlas atlas     34924 Feb 13 16:16 runpilot2-wrapper.sh
2025-02-13 14:13:33 (596): Guest Log: -rw-r--r--. 1 atlas atlas      5118 Feb 13 16:16 queuedata.json
2025-02-13 14:13:33 (596): Guest Log: -rwxr-xr-x. 1 atlas atlas     11870 Feb 13 19:09 init_data.xml
2025-02-13 14:13:33 (596): Guest Log: -rwxr-xr-x. 1 atlas atlas    503491 Feb 13 19:09 input.tar.gz
2025-02-13 14:13:33 (596): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Feb 13 19:09 start_atlas.sh
2025-02-13 14:13:33 (596): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb 13 19:09 EVNT.43078917._001956.pool.root.1 -> /data/./ATLAS.root_0
2025-02-13 14:13:33 (596): Guest Log: -rw-r--r--. 1 atlas atlas      2547 Feb 13 19:09 pandaJob.out
2025-02-13 14:13:33 (596): Guest Log: -rw-------. 1 atlas atlas       424 Feb 13 19:09 setup.sh.local
2025-02-13 14:13:33 (596): Guest Log: -rw-------. 1 atlas atlas    986887 Feb 13 19:10 agis_schedconf.cvmfs.json
2025-02-13 14:13:33 (596): Guest Log: drwx------. 4 atlas atlas      4096 Feb 13 19:10 pilot3
2025-02-13 14:13:33 (596): Guest Log: -rw-------. 1 atlas atlas 329069902 Feb 13 22:11 HITS.43078919._036056.pool.root.1
2025-02-13 14:13:33 (596): Guest Log: -rw-------. 1 atlas atlas      1022 Feb 13 22:12 memory_monitor_summary.json
2025-02-13 14:13:33 (596): Guest Log: -rw-------. 1 atlas atlas   1591814 Feb 13 22:12 agis_ddmendpoints.agis.ALL.json
2025-02-13 14:13:33 (596): Guest Log: -rw-------. 1 atlas atlas    361219 Feb 13 22:12 log.43078919._036056.job.log.tgz.1
2025-02-13 14:13:33 (596): Guest Log: -rw-------. 1 atlas atlas        95 Feb 13 22:12 pilot_heartbeat.json
2025-02-13 14:13:33 (596): Guest Log: -rw-------. 1 atlas atlas      7705 Feb 13 22:12 heartbeat.json
2025-02-13 14:13:33 (596): Guest Log: -rw-------. 1 atlas atlas      4398 Feb 13 22:12 pilotlog.txt
2025-02-13 14:13:33 (596): Guest Log: -rw-------. 1 atlas atlas    910016 Feb 13 22:12 log.43078919._036056.job.log.1
2025-02-13 14:13:33 (596): Guest Log: -rw-------. 1 atlas atlas       357 Feb 13 22:12 output.list
2025-02-13 14:13:33 (596): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb 13 22:12 runtime_log
2025-02-13 14:13:33 (596): Guest Log: -rw-------. 1 atlas atlas   1290240 Feb 13 22:12 result.tar.gz
2025-02-13 14:13:33 (596): Guest Log: -rw-r--r--. 1 atlas atlas     10948 Feb 13 22:12 runtime_log.err
2025-02-13 14:13:33 (596): Guest Log: -rw-------. 1 atlas atlas       660 Feb 13 22:12 dWVMDm63q26n9Rq4apOajLDm4fhM0noT9bVoFjIUDmNPSKDmsvPq7n.diag
2025-02-13 14:13:33 (596): Guest Log: Looking for outputfile HITS.43078919._036056.pool.root.1
2025-02-13 14:13:33 (596): Guest Log: HITS file was successfully produced
2025-02-13 14:13:33 (596): Guest Log: -rw-------. 1 atlas atlas 329069902 Feb 13 22:11 /home/atlas/RunAtlas/HITS.43078919._036056.pool.root.1
2025-02-13 14:13:34 (596): Guest Log: Successfully finished the ATLAS job!
2025-02-13 14:13:34 (596): Guest Log: Copying the results back to the shared directory!
2025-02-13 14:13:34 (596): Guest Log:  *** Contents of shared directory: ***
2025-02-13 14:13:34 (596): Guest Log: total 659068
2025-02-13 14:13:34 (596): Guest Log: -rwxrwxrwx. 1 root root 343984358 Feb 13 19:08 ATLAS.root_0
2025-02-13 14:13:34 (596): Guest Log: -rwxrwxrwx. 1 root root 329069902 Feb 13  2025 HITS.pool.root.1
2025-02-13 14:13:34 (596): Guest Log: -rwxrwxrwx. 1 root root     11870 Feb 13 19:08 init_data.xml
2025-02-13 14:13:34 (596): Guest Log: -rwxrwxrwx. 1 root root    503491 Feb 13 19:03 input.tar.gz
2025-02-13 14:13:34 (596): Guest Log: -rwxrwxrwx. 1 root root   1290240 Feb 13  2025 result.tar.gz
2025-02-13 14:13:34 (596): Guest Log: -rwxrwxrwx. 1 root root     17569 Feb 13 19:03 start_atlas.sh
2025-02-13 14:13:34 (596): Guest Log:  *** Success! Shutting down the machine. ***
2025-02-13 14:13:34 (596): VM Completion File Detected.
2025-02-13 14:13:34 (596): Powering off VM.
2025-02-13 14:13:35 (596): Successfully stopped VM.
2025-02-13 14:13:35 (596): Deregistering VM. (boinc_0986a7794490c0f4, slot#13)
2025-02-13 14:13:35 (596): Removing network bandwidth throttle group from VM.
2025-02-13 14:13:35 (596): Removing VM from VirtualBox.
14:13:40 (596): called boinc_finish(0)

</stderr_txt>
]]>

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