Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-02-12 12:14:39 (7120): Detected: vboxwrapper 26206
2025-02-12 12:14:39 (7120): Detected: BOINC client v8.0.2
2025-02-12 12:14:40 (7120): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-02-12 12:14:40 (7120): Successfully copied 'init_data.xml' to the shared directory.
2025-02-12 12:14:40 (7120): Create VM. (boinc_d01f81fa6c80e856, slot#5)
2025-02-12 12:14:41 (7120): Setting Memory Size for VM. (4800MB)
2025-02-12 12:14:41 (7120): Setting CPU Count for VM. (8)
2025-02-12 12:14:42 (7120): Setting Chipset Options for VM.
2025-02-12 12:14:42 (7120): Setting Graphics Controller Options for VM.
2025-02-12 12:14:42 (7120): Setting Boot Options for VM.
2025-02-12 12:14:42 (7120): Setting Network Configuration for NAT.
2025-02-12 12:14:43 (7120): Enabling VM Network Access.
2025-02-12 12:14:43 (7120): Disabling USB Support for VM.
2025-02-12 12:14:43 (7120): Disabling COM Port Support for VM.
2025-02-12 12:14:44 (7120): Disabling LPT Port Support for VM.
2025-02-12 12:14:44 (7120): Disabling Audio Support for VM.
2025-02-12 12:14:44 (7120): Disabling Clipboard Support for VM.
2025-02-12 12:14:44 (7120): Disabling Drag and Drop Support for VM.
2025-02-12 12:14:45 (7120): Adding storage controller(s) to VM.
2025-02-12 12:14:45 (7120): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-02-12 12:14:48 (7120): Adding VirtualBox Guest Additions to VM.
2025-02-12 12:14:48 (7120): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-02-12 12:14:49 (7120): forwarding host port 55808 to guest port 80
2025-02-12 12:14:49 (7120): Enabling remote desktop for VM.
2025-02-12 12:14:49 (7120): Required extension pack not installed, remote desktop not enabled.
2025-02-12 12:14:49 (7120): Enabling shared directory for VM.
2025-02-12 12:14:50 (7120): Starting VM using VBoxManage interface. (boinc_d01f81fa6c80e856, slot#5)
2025-02-12 12:14:56 (7120): Successfully started VM. (PID = '9268')
2025-02-12 12:14:56 (7120): Reporting VM Process ID to BOINC.
2025-02-12 12:14:56 (7120): Guest Log: BIOS: VirtualBox 7.0.6
2025-02-12 12:14:56 (7120): Guest Log: CPUID EDX: 0x178bfbff
2025-02-12 12:14:56 (7120): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-02-12 12:14:56 (7120): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-02-12 12:14:56 (7120): VM state change detected. (old = 'poweredoff', new = 'running')
2025-02-12 12:14:56 (7120): Detected: Web Application Enabled (http://localhost:55808)
2025-02-12 12:14:56 (7120): Preference change detected
2025-02-12 12:14:56 (7120): Setting CPU throttle for VM. (90%)
2025-02-12 12:14:56 (7120): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-02-12 12:14:58 (7120): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-02-12 12:14:58 (7120): Guest Log: BIOS: Booting from Hard Disk...
2025-02-12 12:15:00 (7120): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-02-12 12:15:00 (7120): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-02-12 12:15:00 (7120): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-02-12 12:15:00 (7120): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-02-12 12:15:00 (7120): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-02-12 12:15:00 (7120): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-02-12 12:15:00 (7120): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-02-12 12:15:00 (7120): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-02-12 12:15:00 (7120): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-02-12 12:15:00 (7120): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-02-12 12:15:00 (7120): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-02-12 12:15:00 (7120): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-02-12 12:15:00 (7120): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-02-12 12:15:00 (7120): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-02-12 12:15:00 (7120): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-02-12 12:15:00 (7120): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-02-12 12:15:00 (7120): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-02-12 12:15:00 (7120): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-02-12 12:15:00 (7120): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-02-12 12:15:00 (7120): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-02-12 12:15:00 (7120): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-02-12 12:15:00 (7120): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-02-12 12:15:00 (7120): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-02-12 12:15:00 (7120): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-02-12 12:15:00 (7120): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-02-12 12:15:00 (7120): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-02-12 12:15:00 (7120): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-02-12 12:15:00 (7120): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-02-12 12:15:00 (7120): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-02-12 12:15:00 (7120): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-02-12 12:15:00 (7120): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-02-12 12:15:00 (7120): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-02-12 12:15:06 (7120): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-02-12 12:15:06 (7120): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-02-12 12:15:10 (7120): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-02-12 12:15:10 (7120): Guest Log: 00:00:00.000109 main     Log opened 2025-02-12T12:15:07.588814000Z
2025-02-12 12:15:10 (7120): Guest Log: 00:00:00.000169 main     OS Product: Linux
2025-02-12 12:15:10 (7120): Guest Log: 00:00:00.000186 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-02-12 12:15:10 (7120): Guest Log: 00:00:00.000199 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-02-12 12:15:10 (7120): Guest Log: 00:00:00.000212 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-02-12 12:15:10 (7120): Guest Log: 00:00:00.000212 main     Process ID: 1364
2025-02-12 12:15:10 (7120): Guest Log: 00:00:00.000213 main     Package type: LINUX_64BITS_GENERIC
2025-02-12 12:15:10 (7120): Guest Log: 00:00:00.000610 main     5.2.32 r132073 started. Verbose level = 0
2025-02-12 12:15:10 (7120): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-02-12 12:15:10 (7120): Guest Log: [INFO] Mounting shared directory
2025-02-12 12:15:10 (7120): Guest Log: [INFO] Checking for init_data.xml
2025-02-12 12:15:16 (7120): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-02-12 12:15:16 (7120): Guest Log: [INFO] Detected branch: prod
2025-02-12 12:15:16 (7120): Guest Log: This is the prod version of the ATLAS job wrapper
2025-02-12 12:15:16 (7120): Guest Log: Copying input files
2025-02-12 12:15:17 (7120): Guest Log: Copied input files into RunAtlas.
2025-02-12 12:15:17 (7120): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-02-12 12:15:17 (7120): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-02-12 12:15:17 (7120): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-02-12 12:15:17 (7120): Guest Log: Further information can be found at the LHC@home message board.
2025-02-12 12:15:20 (7120): Guest Log: 00:00:10.002521 timesync vgsvcTimeSyncWorker: Radical guest time change: 28 812 329 895 000ns (GuestNow=1 739 391 319 920 539 000 ns GuestLast=1 739 362 507 590 644 000 ns fSetTimeLastLoop=true )
2025-02-12 12:15:26 (7120): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-02-12 12:15:26 (7120): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-02-12 12:15:26 (7120): Guest Log: 2.6.3.0 1646 0 32200 142573 4 1 3117296 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-02-12 12:15:26 (7120): Guest Log: copied the webapp to /var/www
2025-02-12 12:15:26 (7120): Guest Log: ATHENA_PROC_NUMBER=8
2025-02-12 12:15:26 (7120): Guest Log: ATHENA_CORE_NUMBER=8
2025-02-12 12:15:27 (7120): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-02-12 12:15:27 (7120): Guest Log:  *** Starting ATLAS job. (PandaID=6511107309 taskID=43078919) ***
2025-02-12 13:55:04 (7120): Status Report: Elapsed Time: '6000.000000'
2025-02-12 13:55:04 (7120): Status Report: CPU Time: '32863.031250'
2025-02-12 15:29:29 (7120): Guest Log:  *** Job finished ***
2025-02-12 15:29:29 (7120): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-02-12 15:29:29 (7120): Guest Log: 2025-02-12 23:29:14,222 | INFO     | [data] queue_monitor thread has finished
2025-02-12 15:29:29 (7120): Guest Log: 2025-02-12 23:29:20,751 | INFO     | job.realtimelogging is not enabled
2025-02-12 15:29:29 (7120): Guest Log: 2025-02-12 23:29:21,754 | INFO     | [payload] run_realtimelog thread has finished
2025-02-12 15:29:29 (7120): Guest Log: 2025-02-12 23:29:23,372 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140375242790720)>', '<ExcThread(monitor, started 140374790088448)>']
2025-02-12 15:29:29 (7120): Guest Log: 2025-02-12 23:29:23,466 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-02-12 15:29:29 (7120): Guest Log: 2025-02-12 23:29:23,466 | INFO     | [monitor] control thread has ended
2025-02-12 15:29:29 (7120): Guest Log: 2025-02-12 23:29:28,389 | INFO     | all workflow threads have been joined
2025-02-12 15:29:29 (7120): Guest Log: 2025-02-12 23:29:28,389 | INFO     | end of generic workflow (traces error code: 0)
2025-02-12 15:29:29 (7120): Guest Log: 2025-02-12 23:29:28,389 | INFO     | traces error code: 0
2025-02-12 15:29:29 (7120): Guest Log: 2025-02-12 23:29:28,389 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-02-12 15:29:29 (7120): Guest Log: 2025-02-12 23:29:28,455 [wrapper] ==== pilot stdout END ====
2025-02-12 15:29:29 (7120): Guest Log: 2025-02-12 23:29:28,457 [wrapper] ==== wrapper stdout RESUME ====
2025-02-12 15:29:29 (7120): Guest Log: 2025-02-12 23:29:28,460 [wrapper] pilotpid: 6030
2025-02-12 15:29:29 (7120): Guest Log: 2025-02-12 23:29:28,463 [wrapper] Pilot exit status: 0
2025-02-12 15:29:29 (7120): Guest Log: 2025-02-12 23:29:28,528 [wrapper] pandaids: 6511107309
2025-02-12 15:29:29 (7120): Guest Log: 2025-02-12 23:29:28,547 [wrapper] cleanup supervisor_pilot 12226 6031
2025-02-12 15:29:29 (7120): Guest Log: 2025-02-12 23:29:28,551 [wrapper] Test setup, not cleaning
2025-02-12 15:29:29 (7120): Guest Log: 2025-02-12 23:29:28,557 [wrapper] apfmon messages muted
2025-02-12 15:29:29 (7120): Guest Log: 2025-02-12 23:29:28,561 [wrapper] ==== wrapper stdout END ====
2025-02-12 15:29:29 (7120): Guest Log: 2025-02-12 23:29:28,565 [wrapper] ==== wrapper stderr END ====
2025-02-12 15:29:29 (7120): Guest Log:  *** Error codes and diagnostics ***
2025-02-12 15:29:29 (7120): Guest Log:     "exeErrorCode": 0,
2025-02-12 15:29:29 (7120): Guest Log:     "exeErrorDiag": "",
2025-02-12 15:29:29 (7120): Guest Log:     "pilotErrorCode": 0,
2025-02-12 15:29:29 (7120): Guest Log:     "pilotErrorDiag": "",
2025-02-12 15:29:29 (7120): Guest Log:  *** Listing of results directory ***
2025-02-12 15:29:29 (7120): Guest Log: total 324604
2025-02-12 15:29:29 (7120): Guest Log: -rw-r--r--. 1 atlas atlas    491065 Feb 12 16:52 pilot3.tar.gz
2025-02-12 15:29:29 (7120): Guest Log: -rw-r--r--. 1 atlas atlas      5118 Feb 12 16:57 queuedata.json
2025-02-12 15:29:29 (7120): Guest Log: -rwx------. 1 atlas atlas     34924 Feb 12 16:58 runpilot2-wrapper.sh
2025-02-12 15:29:29 (7120): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Feb 12 20:15 start_atlas.sh
2025-02-12 15:29:29 (7120): Guest Log: -rwxr-xr-x. 1 atlas atlas    503494 Feb 12 20:15 input.tar.gz
2025-02-12 15:29:29 (7120): Guest Log: -rwxr-xr-x. 1 atlas atlas     11868 Feb 12 20:15 init_data.xml
2025-02-12 15:29:29 (7120): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb 12 20:15 EVNT.43078917._001484.pool.root.1 -> /data/./ATLAS.root_0
2025-02-12 15:29:29 (7120): Guest Log: -rw-r--r--. 1 atlas atlas      2548 Feb 12 20:15 pandaJob.out
2025-02-12 15:29:29 (7120): Guest Log: -rw-------. 1 atlas atlas       424 Feb 12 20:15 setup.sh.local
2025-02-12 15:29:29 (7120): Guest Log: -rw-------. 1 atlas atlas    986918 Feb 12 20:16 agis_schedconf.cvmfs.json
2025-02-12 15:29:29 (7120): Guest Log: drwx------. 4 atlas atlas      4096 Feb 12 20:17 pilot3
2025-02-12 15:29:29 (7120): Guest Log: -rw-------. 1 atlas atlas 326031780 Feb 12 23:28 HITS.43078919._026782.pool.root.1
2025-02-12 15:29:29 (7120): Guest Log: -rw-------. 1 atlas atlas        95 Feb 12 23:28 pilot_heartbeat.json
2025-02-12 15:29:29 (7120): Guest Log: -rw-------. 1 atlas atlas      1025 Feb 12 23:28 memory_monitor_summary.json
2025-02-12 15:29:29 (7120): Guest Log: -rw-------. 1 atlas atlas   1591814 Feb 12 23:28 agis_ddmendpoints.agis.ALL.json
2025-02-12 15:29:29 (7120): Guest Log: -rw-------. 1 atlas atlas    363593 Feb 12 23:28 log.43078919._026782.job.log.tgz.1
2025-02-12 15:29:29 (7120): Guest Log: -rw-------. 1 atlas atlas      7708 Feb 12 23:29 heartbeat.json
2025-02-12 15:29:29 (7120): Guest Log: -rw-------. 1 atlas atlas      4347 Feb 12 23:29 pilotlog.txt
2025-02-12 15:29:29 (7120): Guest Log: -rw-------. 1 atlas atlas    948774 Feb 12 23:29 log.43078919._026782.job.log.1
2025-02-12 15:29:29 (7120): Guest Log: -rw-------. 1 atlas atlas       357 Feb 12 23:29 output.list
2025-02-12 15:29:29 (7120): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb 12 23:29 runtime_log
2025-02-12 15:29:29 (7120): Guest Log: -rw-------. 1 atlas atlas   1331200 Feb 12 23:29 result.tar.gz
2025-02-12 15:29:29 (7120): Guest Log: -rw-------. 1 atlas atlas       660 Feb 12 23:29 xroLDmEFV26nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm3sYKDmg0qwEn.diag
2025-02-12 15:29:29 (7120): Guest Log: -rw-r--r--. 1 atlas atlas     10948 Feb 12 23:29 runtime_log.err
2025-02-12 15:29:29 (7120): Guest Log: Looking for outputfile HITS.43078919._026782.pool.root.1
2025-02-12 15:29:29 (7120): Guest Log: HITS file was successfully produced
2025-02-12 15:29:29 (7120): Guest Log: -rw-------. 1 atlas atlas 326031780 Feb 12 23:28 /home/atlas/RunAtlas/HITS.43078919._026782.pool.root.1
2025-02-12 15:29:30 (7120): Guest Log: Successfully finished the ATLAS job!
2025-02-12 15:29:30 (7120): Guest Log: Copying the results back to the shared directory!
2025-02-12 15:29:30 (7120): Guest Log:  *** Contents of shared directory: ***
2025-02-12 15:29:30 (7120): Guest Log: total 653768
2025-02-12 15:29:30 (7120): Guest Log: -rwxrwxrwx. 1 root root 341555929 Feb 12 20:14 ATLAS.root_0
2025-02-12 15:29:30 (7120): Guest Log: -rwxrwxrwx. 1 root root 326031780 Feb 12 23:29 HITS.pool.root.1
2025-02-12 15:29:30 (7120): Guest Log: -rwxrwxrwx. 1 root root     11868 Feb 12 20:14 init_data.xml
2025-02-12 15:29:30 (7120): Guest Log: -rwxrwxrwx. 1 root root    503494 Feb 12 20:09 input.tar.gz
2025-02-12 15:29:30 (7120): Guest Log: -rwxrwxrwx. 1 root root   1331200 Feb 12  2025 result.tar.gz
2025-02-12 15:29:30 (7120): Guest Log: -rwxrwxrwx. 1 root root     17569 Feb 12 20:09 start_atlas.sh
2025-02-12 15:29:30 (7120): Guest Log:  *** Success! Shutting down the machine. ***
2025-02-12 15:29:30 (7120): VM Completion File Detected.
2025-02-12 15:29:30 (7120): Powering off VM.
2025-02-12 15:29:31 (7120): Successfully stopped VM.
2025-02-12 15:29:31 (7120): Deregistering VM. (boinc_d01f81fa6c80e856, slot#5)
2025-02-12 15:29:31 (7120): Removing network bandwidth throttle group from VM.
2025-02-12 15:29:31 (7120): Removing VM from VirtualBox.
15:29:36 (7120): called boinc_finish(0)

</stderr_txt>
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