Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-02-14 20:14:56 (17852): Detected: vboxwrapper 26206
2025-02-14 20:14:56 (17852): Detected: BOINC client v7.20.2
2025-02-14 20:14:56 (17852): Detected: VirtualBox VboxManage Interface (Version: 7.0.4)
2025-02-14 20:14:57 (17852): Successfully copied 'init_data.xml' to the shared directory.
2025-02-14 20:14:58 (17852): Create VM. (boinc_1a015fae0581b753, slot#11)
2025-02-14 20:14:58 (17852): Setting Memory Size for VM. (4800MB)
2025-02-14 20:14:58 (17852): Setting CPU Count for VM. (8)
2025-02-14 20:14:59 (17852): Setting Chipset Options for VM.
2025-02-14 20:14:59 (17852): Setting Graphics Controller Options for VM.
2025-02-14 20:14:59 (17852): Setting Boot Options for VM.
2025-02-14 20:14:59 (17852): Setting Network Configuration for NAT.
2025-02-14 20:15:00 (17852): Enabling VM Network Access.
2025-02-14 20:15:00 (17852): Disabling USB Support for VM.
2025-02-14 20:15:00 (17852): Disabling COM Port Support for VM.
2025-02-14 20:15:00 (17852): Disabling LPT Port Support for VM.
2025-02-14 20:15:01 (17852): Disabling Audio Support for VM.
2025-02-14 20:15:01 (17852): Disabling Clipboard Support for VM.
2025-02-14 20:15:01 (17852): Disabling Drag and Drop Support for VM.
2025-02-14 20:15:01 (17852): Adding storage controller(s) to VM.
2025-02-14 20:15:02 (17852): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-02-14 20:15:02 (17852): Adding VirtualBox Guest Additions to VM.
2025-02-14 20:15:02 (17852): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-02-14 20:15:03 (17852): forwarding host port 53217 to guest port 80
2025-02-14 20:15:03 (17852): Enabling remote desktop for VM.
2025-02-14 20:15:03 (17852): Required extension pack not installed, remote desktop not enabled.
2025-02-14 20:15:03 (17852): Enabling shared directory for VM.
2025-02-14 20:15:04 (17852): Starting VM using VBoxManage interface. (boinc_1a015fae0581b753, slot#11)
2025-02-14 20:15:11 (17852): Successfully started VM. (PID = '23648')
2025-02-14 20:15:11 (17852): Reporting VM Process ID to BOINC.
2025-02-14 20:15:11 (17852): Guest Log: BIOS: VirtualBox 7.0.4
2025-02-14 20:15:11 (17852): Guest Log: CPUID EDX: 0x178bfbff
2025-02-14 20:15:11 (17852): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-02-14 20:15:11 (17852): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-02-14 20:15:11 (17852): VM state change detected. (old = 'poweredoff', new = 'running')
2025-02-14 20:15:12 (17852): Detected: Web Application Enabled (http://localhost:53217)
2025-02-14 20:15:12 (17852): Preference change detected
2025-02-14 20:15:12 (17852): Setting CPU throttle for VM. (100%)
2025-02-14 20:15:12 (17852): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-02-14 20:15:14 (17852): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-02-14 20:15:14 (17852): Guest Log: BIOS: Booting from Hard Disk...
2025-02-14 20:15:17 (17852): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-02-14 20:15:17 (17852): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-02-14 20:15:17 (17852): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-02-14 20:15:17 (17852): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-02-14 20:15:17 (17852): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-02-14 20:15:17 (17852): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-02-14 20:15:17 (17852): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-02-14 20:15:17 (17852): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-02-14 20:15:17 (17852): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-02-14 20:15:17 (17852): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-02-14 20:15:17 (17852): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-02-14 20:15:17 (17852): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-02-14 20:15:17 (17852): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-02-14 20:15:17 (17852): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-02-14 20:15:17 (17852): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-02-14 20:15:17 (17852): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-02-14 20:15:17 (17852): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-02-14 20:15:17 (17852): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-02-14 20:15:17 (17852): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-02-14 20:15:17 (17852): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-02-14 20:15:17 (17852): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-02-14 20:15:17 (17852): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-02-14 20:15:17 (17852): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-02-14 20:15:17 (17852): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-02-14 20:15:17 (17852): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-02-14 20:15:17 (17852): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-02-14 20:15:17 (17852): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-02-14 20:15:17 (17852): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-02-14 20:15:17 (17852): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-02-14 20:15:17 (17852): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-02-14 20:15:17 (17852): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-02-14 20:15:17 (17852): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-02-14 20:15:26 (17852): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-02-14 20:15:26 (17852): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-02-14 20:15:38 (17852): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-02-14 20:15:38 (17852): Guest Log: 00:00:00.000332 main     Log opened 2025-02-14T20:15:35.771869000Z
2025-02-14 20:15:38 (17852): Guest Log: 00:00:00.000518 main     OS Product: Linux
2025-02-14 20:15:38 (17852): Guest Log: 00:00:00.000575 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-02-14 20:15:38 (17852): Guest Log: 00:00:00.000624 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-02-14 20:15:38 (17852): Guest Log: 00:00:00.000672 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-02-14 20:15:38 (17852): Guest Log: 00:00:00.000674 main     Process ID: 1369
2025-02-14 20:15:38 (17852): Guest Log: 00:00:00.000675 main     Package type: LINUX_64BITS_GENERIC
2025-02-14 20:15:38 (17852): Guest Log: 00:00:00.002469 main     5.2.32 r132073 started. Verbose level = 0
2025-02-14 20:15:38 (17852): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-02-14 20:15:38 (17852): Guest Log: [INFO] Mounting shared directory
2025-02-14 20:15:38 (17852): Guest Log: [INFO] Checking for init_data.xml
2025-02-14 20:15:48 (17852): Guest Log: 00:00:10.007603 timesync vgsvcTimeSyncWorker: Radical guest time change: -28 788 366 995 000ns (GuestNow=1 739 535 347 409 040 000 ns GuestLast=1 739 564 135 776 035 000 ns fSetTimeLastLoop=true )
2025-02-14 20:15:49 (17852): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-02-14 20:15:49 (17852): Guest Log: [INFO] Detected branch: prod
2025-02-14 20:15:49 (17852): Guest Log: This is the prod version of the ATLAS job wrapper
2025-02-14 20:15:49 (17852): Guest Log: Copying input files
2025-02-14 20:15:52 (17852): Guest Log: Copied input files into RunAtlas.
2025-02-14 20:15:52 (17852): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-02-14 20:15:52 (17852): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-02-14 20:15:52 (17852): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-02-14 20:15:52 (17852): Guest Log: Further information can be found at the LHC@home message board.
2025-02-14 20:16:04 (17852): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-02-14 20:16:04 (17852): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-02-14 20:16:04 (17852): Guest Log: 2.6.3.0 1648 0 30184 142638 4 1 3117296 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-02-14 20:16:06 (17852): Guest Log: copied the webapp to /var/www
2025-02-14 20:16:06 (17852): Guest Log: ATHENA_PROC_NUMBER=8
2025-02-14 20:16:06 (17852): Guest Log: ATHENA_CORE_NUMBER=8
2025-02-14 20:16:07 (17852): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-02-14 20:16:07 (17852): Guest Log:  *** Starting ATLAS job. (PandaID=6511061672 taskID=43078919) ***
2025-02-14 21:55:18 (17852): Status Report: Elapsed Time: '6000.000000'
2025-02-14 21:55:18 (17852): Status Report: CPU Time: '25125.656250'
2025-02-14 23:35:24 (17852): Status Report: Elapsed Time: '12000.000000'
2025-02-14 23:35:24 (17852): Status Report: CPU Time: '69011.906250'
2025-02-15 01:15:30 (17852): Status Report: Elapsed Time: '18000.000000'
2025-02-15 01:15:30 (17852): Status Report: CPU Time: '114391.609375'
2025-02-15 02:55:36 (17852): Status Report: Elapsed Time: '24000.000000'
2025-02-15 02:55:36 (17852): Status Report: CPU Time: '161388.093750'
2025-02-15 04:35:43 (17852): Status Report: Elapsed Time: '30000.000000'
2025-02-15 04:35:43 (17852): Status Report: CPU Time: '208549.531250'
2025-02-15 06:15:49 (17852): Status Report: Elapsed Time: '36000.000000'
2025-02-15 06:15:49 (17852): Status Report: CPU Time: '255556.953125'
2025-02-15 07:55:53 (17852): Status Report: Elapsed Time: '42000.000000'
2025-02-15 07:55:53 (17852): Status Report: CPU Time: '302889.453125'
2025-02-15 08:40:11 (17852): Guest Log:  *** Job finished ***
2025-02-15 08:40:11 (17852): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-02-15 08:40:11 (17852): Guest Log: 2025-02-15 00:40:00,255 | INFO     | [payload] run_realtimelog thread has finished
2025-02-15 08:40:11 (17852): Guest Log: 2025-02-15 00:40:01,030 | INFO     | [data] copytool_out thread has finished
2025-02-15 08:40:11 (17852): Guest Log: 2025-02-15 00:40:01,789 | INFO     | [data] queue_monitor thread has finished
2025-02-15 08:40:11 (17852): Guest Log: 2025-02-15 00:40:02,943 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140557431678784)>', '<ExcThread(monitor, started 140556663502592)>']
2025-02-15 08:40:11 (17852): Guest Log: 2025-02-15 00:40:03,820 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-02-15 08:40:11 (17852): Guest Log: 2025-02-15 00:40:03,820 | INFO     | [monitor] control thread has ended
2025-02-15 08:40:11 (17852): Guest Log: 2025-02-15 00:40:07,955 | INFO     | all workflow threads have been joined
2025-02-15 08:40:11 (17852): Guest Log: 2025-02-15 00:40:07,955 | INFO     | end of generic workflow (traces error code: 0)
2025-02-15 08:40:11 (17852): Guest Log: 2025-02-15 00:40:07,955 | INFO     | traces error code: 0
2025-02-15 08:40:11 (17852): Guest Log: 2025-02-15 00:40:07,956 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-02-15 08:40:11 (17852): Guest Log: 2025-02-15 00:40:08,127 [wrapper] ==== pilot stdout END ====
2025-02-15 08:40:11 (17852): Guest Log: 2025-02-15 00:40:08,138 [wrapper] ==== wrapper stdout RESUME ====
2025-02-15 08:40:11 (17852): Guest Log: 2025-02-15 00:40:08,145 [wrapper] pilotpid: 6072
2025-02-15 08:40:11 (17852): Guest Log: 2025-02-15 00:40:08,153 [wrapper] Pilot exit status: 0
2025-02-15 08:40:11 (17852): Guest Log: 2025-02-15 00:40:08,535 [wrapper] pandaids: 6511061672
2025-02-15 08:40:11 (17852): Guest Log: 2025-02-15 00:40:08,629 [wrapper] cleanup supervisor_pilot 23151 6073
2025-02-15 08:40:11 (17852): Guest Log: 2025-02-15 00:40:08,642 [wrapper] Test setup, not cleaning
2025-02-15 08:40:11 (17852): Guest Log: 2025-02-15 00:40:08,662 [wrapper] apfmon messages muted
2025-02-15 08:40:11 (17852): Guest Log: 2025-02-15 00:40:08,669 [wrapper] ==== wrapper stdout END ====
2025-02-15 08:40:11 (17852): Guest Log: 2025-02-15 00:40:08,678 [wrapper] ==== wrapper stderr END ====
2025-02-15 08:40:11 (17852): Guest Log:  *** Error codes and diagnostics ***
2025-02-15 08:40:11 (17852): Guest Log:     "exeErrorCode": 0,
2025-02-15 08:40:11 (17852): Guest Log:     "exeErrorDiag": "",
2025-02-15 08:40:11 (17852): Guest Log:     "pilotErrorCode": 0,
2025-02-15 08:40:11 (17852): Guest Log:     "pilotErrorDiag": "",
2025-02-15 08:40:11 (17852): Guest Log:  *** Listing of results directory ***
2025-02-15 08:40:11 (17852): Guest Log: total 332100
2025-02-15 08:40:11 (17852): Guest Log: -rw-r--r--. 1 atlas atlas    491065 Feb 12 14:52 pilot3.tar.gz
2025-02-15 08:40:11 (17852): Guest Log: -rwx------. 1 atlas atlas     34924 Feb 12 14:53 runpilot2-wrapper.sh
2025-02-15 08:40:11 (17852): Guest Log: -rw-r--r--. 1 atlas atlas      5118 Feb 12 14:53 queuedata.json
2025-02-15 08:40:11 (17852): Guest Log: -rwxr-xr-x. 1 atlas atlas      8766 Feb 14 12:15 init_data.xml
2025-02-15 08:40:11 (17852): Guest Log: -rwxr-xr-x. 1 atlas atlas    503490 Feb 14 12:15 input.tar.gz
2025-02-15 08:40:11 (17852): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Feb 14 12:15 start_atlas.sh
2025-02-15 08:40:11 (17852): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb 14 12:15 EVNT.43078917._001417.pool.root.1 -> /data/./ATLAS.root_0
2025-02-15 08:40:11 (17852): Guest Log: -rw-r--r--. 1 atlas atlas      2547 Feb 14 12:16 pandaJob.out
2025-02-15 08:40:11 (17852): Guest Log: -rw-------. 1 atlas atlas       424 Feb 14 12:16 setup.sh.local
2025-02-15 08:40:11 (17852): Guest Log: -rw-------. 1 atlas atlas    986937 Feb 14 12:21 agis_schedconf.cvmfs.json
2025-02-15 08:40:11 (17852): Guest Log: drwx------. 4 atlas atlas      4096 Feb 14 12:21 pilot3
2025-02-15 08:40:11 (17852): Guest Log: -rw-------. 1 atlas atlas 324724433 Feb 15 00:37 HITS.43078919._025732.pool.root.1
2025-02-15 08:40:11 (17852): Guest Log: -rw-------. 1 atlas atlas        95 Feb 15 00:38 pilot_heartbeat.json
2025-02-15 08:40:11 (17852): Guest Log: -rw-------. 1 atlas atlas      1031 Feb 15 00:39 memory_monitor_summary.json
2025-02-15 08:40:11 (17852): Guest Log: -rw-------. 1 atlas atlas   1593946 Feb 15 00:39 agis_ddmendpoints.agis.ALL.json
2025-02-15 08:40:11 (17852): Guest Log: -rw-------. 1 atlas atlas    704762 Feb 15 00:39 log.43078919._025732.job.log.tgz.1
2025-02-15 08:40:11 (17852): Guest Log: -rw-------. 1 atlas atlas      7755 Feb 15 00:39 heartbeat.json
2025-02-15 08:40:11 (17852): Guest Log: -rw-------. 1 atlas atlas      4584 Feb 15 00:40 pilotlog.txt
2025-02-15 08:40:11 (17852): Guest Log: -rw-------. 1 atlas atlas   5091442 Feb 15 00:40 log.43078919._025732.job.log.1
2025-02-15 08:40:11 (17852): Guest Log: -rw-------. 1 atlas atlas       357 Feb 15 00:40 output.list
2025-02-15 08:40:11 (17852): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb 15 00:40 runtime_log
2025-02-15 08:40:11 (17852): Guest Log: -rw-------. 1 atlas atlas   5816320 Feb 15 00:40 result.tar.gz
2025-02-15 08:40:11 (17852): Guest Log: -rw-r--r--. 1 atlas atlas     10948 Feb 15 00:40 runtime_log.err
2025-02-15 08:40:11 (17852): Guest Log: -rw-------. 1 atlas atlas       664 Feb 15 00:40 NbeLDm7HT26n9Rq4apOajLDm4fhM0noT9bVoFjIUDmGyQKDmYh9yQn.diag
2025-02-15 08:40:11 (17852): Guest Log: Looking for outputfile HITS.43078919._025732.pool.root.1
2025-02-15 08:40:11 (17852): Guest Log: HITS file was successfully produced
2025-02-15 08:40:11 (17852): Guest Log: -rw-------. 1 atlas atlas 324724433 Feb 15 00:37 /home/atlas/RunAtlas/HITS.43078919._025732.pool.root.1
2025-02-15 08:40:14 (17852): Guest Log: Successfully finished the ATLAS job!
2025-02-15 08:40:14 (17852): Guest Log: Copying the results back to the shared directory!
2025-02-15 08:40:15 (17852): Guest Log:  *** Contents of shared directory: ***
2025-02-15 08:40:15 (17852): Guest Log: total 658940
2025-02-15 08:40:15 (17852): Guest Log: -rwxrwxrwx. 1 root root 343674563 Feb 14 12:14 ATLAS.root_0
2025-02-15 08:40:15 (17852): Guest Log: -rwxrwxrwx. 1 root root 324724433 Feb 15 00:40 HITS.pool.root.1
2025-02-15 08:40:15 (17852): Guest Log: -rwxrwxrwx. 1 root root      8766 Feb 14 12:14 init_data.xml
2025-02-15 08:40:15 (17852): Guest Log: -rwxrwxrwx. 1 root root    503490 Feb 12 17:58 input.tar.gz
2025-02-15 08:40:15 (17852): Guest Log: -rwxrwxrwx. 1 root root   5816320 Feb 15 00:40 result.tar.gz
2025-02-15 08:40:15 (17852): Guest Log: -rwxrwxrwx. 1 root root     17569 Feb 12 17:58 start_atlas.sh
2025-02-15 08:40:15 (17852): Guest Log:  *** Success! Shutting down the machine. ***
2025-02-15 08:40:15 (17852): VM Completion File Detected.
2025-02-15 08:40:15 (17852): Powering off VM.
2025-02-15 08:40:16 (17852): Successfully stopped VM.
2025-02-15 08:40:16 (17852): Deregistering VM. (boinc_1a015fae0581b753, slot#11)
2025-02-15 08:40:16 (17852): Removing network bandwidth throttle group from VM.
2025-02-15 08:40:16 (17852): Removing VM from VirtualBox.
08:40:21 (17852): called boinc_finish(0)

</stderr_txt>
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