Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-02-14 20:24:44 (3252): Detected: vboxwrapper 26206
2025-02-14 20:24:44 (3252): Detected: BOINC client v8.0.2
2025-02-14 20:24:45 (3252): Detected: VirtualBox VboxManage Interface (Version: 6.1.36)
2025-02-14 20:24:45 (3252): Successfully copied 'init_data.xml' to the shared directory.
2025-02-14 20:24:46 (3252): Create VM. (boinc_92f9e89fbdba1707, slot#0)
2025-02-14 20:24:46 (3252): Setting Memory Size for VM. (4200MB)
2025-02-14 20:24:46 (3252): Setting CPU Count for VM. (2)
2025-02-14 20:24:47 (3252): Setting Chipset Options for VM.
2025-02-14 20:24:47 (3252): Setting Graphics Controller Options for VM.
2025-02-14 20:24:47 (3252): Setting Boot Options for VM.
2025-02-14 20:24:48 (3252): Setting Network Configuration for NAT.
2025-02-14 20:24:48 (3252): Enabling VM Network Access.
2025-02-14 20:24:48 (3252): Disabling USB Support for VM.
2025-02-14 20:24:49 (3252): Disabling COM Port Support for VM.
2025-02-14 20:24:49 (3252): Disabling LPT Port Support for VM.
2025-02-14 20:24:49 (3252): Disabling Audio Support for VM.
2025-02-14 20:24:49 (3252): Disabling Clipboard Support for VM.
2025-02-14 20:24:50 (3252): Disabling Drag and Drop Support for VM.
2025-02-14 20:24:50 (3252): Adding storage controller(s) to VM.
2025-02-14 20:24:50 (3252): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-02-14 20:24:51 (3252): Adding VirtualBox Guest Additions to VM.
2025-02-14 20:24:51 (3252): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-02-14 20:24:52 (3252): forwarding host port 52141 to guest port 80
2025-02-14 20:24:52 (3252): Enabling remote desktop for VM.
2025-02-14 20:24:53 (3252): Enabling shared directory for VM.
2025-02-14 20:24:53 (3252): Starting VM using VBoxManage interface. (boinc_92f9e89fbdba1707, slot#0)
2025-02-14 20:24:59 (3252): Successfully started VM. (PID = '8868')
2025-02-14 20:24:59 (3252): Reporting VM Process ID to BOINC.
2025-02-14 20:24:59 (3252): Guest Log: BIOS: VirtualBox 6.1.36
2025-02-14 20:24:59 (3252): Guest Log: CPUID EDX: 0x178bfbff
2025-02-14 20:24:59 (3252): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-02-14 20:24:59 (3252): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-02-14 20:24:59 (3252): VM state change detected. (old = 'poweredoff', new = 'running')
2025-02-14 20:24:59 (3252): Detected: Web Application Enabled (http://localhost:52141)
2025-02-14 20:24:59 (3252): Detected: Remote Desktop Enabled (localhost:52142)
2025-02-14 20:24:59 (3252): Preference change detected
2025-02-14 20:24:59 (3252): Setting CPU throttle for VM. (100%)
2025-02-14 20:24:59 (3252): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 600 seconds) or (Vbox_job.xml: 900 seconds))
2025-02-14 20:25:01 (3252): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-02-14 20:25:01 (3252): Guest Log: BIOS: Booting from Hard Disk...
2025-02-14 20:25:04 (3252): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-02-14 20:25:04 (3252): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-02-14 20:25:04 (3252): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-02-14 20:25:04 (3252): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-02-14 20:25:04 (3252): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-02-14 20:25:04 (3252): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-02-14 20:25:04 (3252): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-02-14 20:25:04 (3252): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-02-14 20:25:04 (3252): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-02-14 20:25:04 (3252): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-02-14 20:25:04 (3252): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-02-14 20:25:04 (3252): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-02-14 20:25:04 (3252): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-02-14 20:25:04 (3252): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-02-14 20:25:04 (3252): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-02-14 20:25:04 (3252): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-02-14 20:25:04 (3252): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-02-14 20:25:04 (3252): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-02-14 20:25:04 (3252): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-02-14 20:25:04 (3252): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-02-14 20:25:04 (3252): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-02-14 20:25:04 (3252): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-02-14 20:25:04 (3252): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-02-14 20:25:04 (3252): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-02-14 20:25:04 (3252): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-02-14 20:25:04 (3252): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-02-14 20:25:04 (3252): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-02-14 20:25:04 (3252): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-02-14 20:25:04 (3252): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-02-14 20:25:04 (3252): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-02-14 20:25:04 (3252): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-02-14 20:25:04 (3252): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-02-14 20:25:09 (3252): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-02-14 20:25:09 (3252): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-02-14 20:25:16 (3252): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-02-14 20:25:16 (3252): Guest Log: 00:00:00.000177 main     Log opened 2025-02-14T20:25:14.523509000Z
2025-02-14 20:25:16 (3252): Guest Log: 00:00:00.000323 main     OS Product: Linux
2025-02-14 20:25:16 (3252): Guest Log: 00:00:00.000401 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-02-14 20:25:16 (3252): Guest Log: 00:00:00.000447 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-02-14 20:25:16 (3252): Guest Log: 00:00:00.000494 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-02-14 20:25:16 (3252): Guest Log: 00:00:00.000495 main     Process ID: 1263
2025-02-14 20:25:16 (3252): Guest Log: 00:00:00.000496 main     Package type: LINUX_64BITS_GENERIC
2025-02-14 20:25:16 (3252): Guest Log: 00:00:00.002012 main     5.2.32 r132073 started. Verbose level = 0
2025-02-14 20:25:16 (3252): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-02-14 20:25:16 (3252): Guest Log: [INFO] Mounting shared directory
2025-02-14 20:25:16 (3252): Guest Log: [INFO] Checking for init_data.xml
2025-02-14 20:25:19 (3252): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-02-14 20:25:19 (3252): Guest Log: [INFO] Detected branch: prod
2025-02-14 20:25:19 (3252): Guest Log: This is the prod version of the ATLAS job wrapper
2025-02-14 20:25:19 (3252): Guest Log: Copying input files
2025-02-14 20:25:21 (3252): Guest Log: Copied input files into RunAtlas.
2025-02-14 20:25:21 (3252): Guest Log: Detected user-configured HTTP proxy at http://192.168.35.184:3128 - will set in /etc/cvmfs/default.local
2025-02-14 20:25:26 (3252): Guest Log: 00:00:10.020906 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 721 972 000ns (GuestNow=1 739 561 125 805 105 000 ns GuestLast=1 739 564 714 527 077 000 ns fSetTimeLastLoop=true )
2025-02-14 20:25:36 (3252): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-02-14 20:25:36 (3252): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-02-14 20:25:36 (3252): Guest Log: 2.6.3.0 1537 0 29504 142651 3 1 3117296 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.35.184:3128 1
2025-02-14 20:25:39 (3252): Guest Log: copied the webapp to /var/www
2025-02-14 20:25:39 (3252): Guest Log: ATHENA_PROC_NUMBER=2
2025-02-14 20:25:39 (3252): Guest Log: ATHENA_CORE_NUMBER=2
2025-02-14 20:25:39 (3252): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-02-14 20:25:39 (3252): Guest Log:  *** Starting ATLAS job. (PandaID=6510655116 taskID=43078919) ***
2025-02-14 20:40:14 (3252): VM state change detected. (old = 'running', new = 'paused')
2025-02-14 21:45:01 (3252): VM state change detected. (old = 'paused', new = 'running')
2025-02-14 21:45:03 (3252): Guest Log: 00:15:00.366936 timesync vgsvcTimeSyncWorker: Radical host time change: 3 896 815 000 000ns (HostNow=1 739 565 903 034 000 000 ns HostLast=1 739 562 006 219 000 000 ns)
2025-02-14 21:45:13 (3252): Guest Log: 00:15:10.367437 timesync vgsvcTimeSyncWorker: Radical guest time change: 3 896 883 796 000ns (GuestNow=1 739 565 913 034 565 000 ns GuestLast=1 739 562 016 150 769 000 ns fSetTimeLastLoop=true )
2025-02-14 23:09:52 (3252): Status Report: Elapsed Time: '6000.000000'
2025-02-14 23:09:52 (3252): Status Report: CPU Time: '10806.158070'
2025-02-15 00:49:58 (3252): Status Report: Elapsed Time: '12000.000000'
2025-02-15 00:49:58 (3252): Status Report: CPU Time: '22805.926591'
2025-02-15 02:30:03 (3252): Status Report: Elapsed Time: '18000.000000'
2025-02-15 02:30:03 (3252): Status Report: CPU Time: '34801.763887'
2025-02-15 04:10:14 (3252): Status Report: Elapsed Time: '24000.000000'
2025-02-15 04:10:14 (3252): Status Report: CPU Time: '46810.315264'
2025-02-15 05:50:20 (3252): Status Report: Elapsed Time: '30000.000000'
2025-02-15 05:50:20 (3252): Status Report: CPU Time: '58808.913778'
2025-02-15 07:30:23 (3252): Status Report: Elapsed Time: '36000.000000'
2025-02-15 07:30:23 (3252): Status Report: CPU Time: '70802.925862'
2025-02-15 09:10:28 (3252): Status Report: Elapsed Time: '42000.000000'
2025-02-15 09:10:28 (3252): Status Report: CPU Time: '82802.397981'
2025-02-15 10:50:42 (3252): Status Report: Elapsed Time: '48000.000000'
2025-02-15 10:50:42 (3252): Status Report: CPU Time: '94775.739933'
2025-02-15 11:04:28 (3252): Guest Log:  *** Job finished ***
2025-02-15 11:04:28 (3252): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-02-15 11:04:28 (3252): Guest Log: 2025-02-15 10:04:20,010 | INFO     | [payload] validate_pre thread has finished
2025-02-15 11:04:28 (3252): Guest Log: 2025-02-15 10:04:20,581 | INFO     | [data] copytool_out thread has finished
2025-02-15 11:04:28 (3252): Guest Log: 2025-02-15 10:04:21,814 | INFO     | [data] queue_monitor thread has finished
2025-02-15 11:04:28 (3252): Guest Log: 2025-02-15 10:04:21,987 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140309032232768)>', '<ExcThread(monitor, started 140308285204224)>']
2025-02-15 11:04:28 (3252): Guest Log: 2025-02-15 10:04:22,866 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-02-15 11:04:28 (3252): Guest Log: 2025-02-15 10:04:22,867 | INFO     | [monitor] control thread has ended
2025-02-15 11:04:28 (3252): Guest Log: 2025-02-15 10:04:26,993 | INFO     | all workflow threads have been joined
2025-02-15 11:04:28 (3252): Guest Log: 2025-02-15 10:04:26,993 | INFO     | end of generic workflow (traces error code: 0)
2025-02-15 11:04:28 (3252): Guest Log: 2025-02-15 10:04:26,994 | INFO     | traces error code: 0
2025-02-15 11:04:28 (3252): Guest Log: 2025-02-15 10:04:26,994 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-02-15 11:04:28 (3252): Guest Log: 2025-02-15 10:04:27,116 [wrapper] ==== pilot stdout END ====
2025-02-15 11:04:28 (3252): Guest Log: 2025-02-15 10:04:27,122 [wrapper] ==== wrapper stdout RESUME ====
2025-02-15 11:04:28 (3252): Guest Log: 2025-02-15 10:04:27,127 [wrapper] pilotpid: 5861
2025-02-15 11:04:28 (3252): Guest Log: 2025-02-15 10:04:27,132 [wrapper] Pilot exit status: 0
2025-02-15 11:04:28 (3252): Guest Log: 2025-02-15 10:04:27,175 [wrapper] pandaids: 6510655116
2025-02-15 11:04:28 (3252): Guest Log: 2025-02-15 10:04:27,209 [wrapper] cleanup supervisor_pilot 13378 5862
2025-02-15 11:04:28 (3252): Guest Log: 2025-02-15 10:04:27,215 [wrapper] Test setup, not cleaning
2025-02-15 11:04:28 (3252): Guest Log: 2025-02-15 10:04:27,227 [wrapper] apfmon messages muted
2025-02-15 11:04:28 (3252): Guest Log: 2025-02-15 10:04:27,232 [wrapper] ==== wrapper stdout END ====
2025-02-15 11:04:28 (3252): Guest Log: 2025-02-15 10:04:27,237 [wrapper] ==== wrapper stderr END ====
2025-02-15 11:04:28 (3252): Guest Log:  *** Error codes and diagnostics ***
2025-02-15 11:04:28 (3252): Guest Log:     "exeErrorCode": 0,
2025-02-15 11:04:28 (3252): Guest Log:     "exeErrorDiag": "",
2025-02-15 11:04:28 (3252): Guest Log:     "pilotErrorCode": 0,
2025-02-15 11:04:28 (3252): Guest Log:     "pilotErrorDiag": "",
2025-02-15 11:04:28 (3252): Guest Log:  *** Listing of results directory ***
2025-02-15 11:04:28 (3252): Guest Log: total 338640
2025-02-15 11:04:28 (3252): Guest Log: -rw-r--r--. 1 atlas atlas    491065 Feb 12 05:27 pilot3.tar.gz
2025-02-15 11:04:28 (3252): Guest Log: -rwx------. 1 atlas atlas     34924 Feb 12 05:42 runpilot2-wrapper.sh
2025-02-15 11:04:28 (3252): Guest Log: -rw-r--r--. 1 atlas atlas      5118 Feb 12 05:42 queuedata.json
2025-02-15 11:04:28 (3252): Guest Log: -rwxr-xr-x. 1 atlas atlas      8441 Feb 14 19:25 init_data.xml
2025-02-15 11:04:28 (3252): Guest Log: -rwxr-xr-x. 1 atlas atlas    503494 Feb 14 19:25 input.tar.gz
2025-02-15 11:04:28 (3252): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Feb 14 19:25 start_atlas.sh
2025-02-15 11:04:28 (3252): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb 14 19:25 EVNT.43078917._001131.pool.root.1 -> /data/./ATLAS.root_0
2025-02-15 11:04:28 (3252): Guest Log: -rw-r--r--. 1 atlas atlas      2547 Feb 14 19:25 pandaJob.out
2025-02-15 11:04:28 (3252): Guest Log: -rw-------. 1 atlas atlas       461 Feb 14 19:25 setup.sh.local
2025-02-15 11:04:28 (3252): Guest Log: -rw-------. 1 atlas atlas    986630 Feb 14 19:26 agis_schedconf.cvmfs.json
2025-02-15 11:04:28 (3252): Guest Log: drwx------. 4 atlas atlas      4096 Feb 14 19:26 pilot3
2025-02-15 11:04:28 (3252): Guest Log: -rw-------. 1 atlas atlas 328531107 Feb 15 10:03 HITS.43078919._022880.pool.root.1
2025-02-15 11:04:28 (3252): Guest Log: -rw-------. 1 atlas atlas        97 Feb 15 10:03 pilot_heartbeat.json
2025-02-15 11:04:28 (3252): Guest Log: -rw-------. 1 atlas atlas      1025 Feb 15 10:04 memory_monitor_summary.json
2025-02-15 11:04:28 (3252): Guest Log: -rw-------. 1 atlas atlas   1593946 Feb 15 10:04 agis_ddmendpoints.agis.ALL.json
2025-02-15 11:04:28 (3252): Guest Log: -rw-------. 1 atlas atlas    721722 Feb 15 10:04 log.43078919._022880.job.log.tgz.1
2025-02-15 11:04:28 (3252): Guest Log: -rw-------. 1 atlas atlas      7729 Feb 15 10:04 heartbeat.json
2025-02-15 11:04:28 (3252): Guest Log: -rw-------. 1 atlas atlas      4591 Feb 15 10:04 pilotlog.txt
2025-02-15 11:04:28 (3252): Guest Log: -rw-------. 1 atlas atlas   6521106 Feb 15 10:04 log.43078919._022880.job.log.1
2025-02-15 11:04:28 (3252): Guest Log: -rw-------. 1 atlas atlas       357 Feb 15 10:04 output.list
2025-02-15 11:04:28 (3252): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb 15 10:04 runtime_log
2025-02-15 11:04:28 (3252): Guest Log: -rw-------. 1 atlas atlas   7260160 Feb 15 10:04 result.tar.gz
2025-02-15 11:04:28 (3252): Guest Log: -rw-r--r--. 1 atlas atlas     11326 Feb 15 10:04 runtime_log.err
2025-02-15 11:04:28 (3252): Guest Log: -rw-------. 1 atlas atlas       665 Feb 15 10:04 7O8KDm5gK26n9Rq4apOajLDm4fhM0noT9bVoFjIUDmOfQKDmQzG30m.diag
2025-02-15 11:04:28 (3252): Guest Log: Looking for outputfile HITS.43078919._022880.pool.root.1
2025-02-15 11:04:28 (3252): Guest Log: HITS file was successfully produced
2025-02-15 11:04:28 (3252): Guest Log: -rw-------. 1 atlas atlas 328531107 Feb 15 10:03 /home/atlas/RunAtlas/HITS.43078919._022880.pool.root.1
2025-02-15 11:04:30 (3252): Guest Log: Successfully finished the ATLAS job!
2025-02-15 11:04:30 (3252): Guest Log: Copying the results back to the shared directory!
2025-02-15 11:04:30 (3252): Guest Log:  *** Contents of shared directory: ***
2025-02-15 11:04:31 (3252): Guest Log: total 664476
2025-02-15 11:04:31 (3252): Guest Log: -rwxrwxrwx. 1 root root 344088629 Feb 14 19:24 ATLAS.root_0
2025-02-15 11:04:31 (3252): Guest Log: -rwxrwxrwx. 1 root root 328531107 Feb 15 10:04 HITS.pool.root.1
2025-02-15 11:04:31 (3252): Guest Log: -rwxrwxrwx. 1 root root      8441 Feb 14 19:24 init_data.xml
2025-02-15 11:04:31 (3252): Guest Log: -rwxrwxrwx. 1 root root    503494 Feb 12 10:27 input.tar.gz
2025-02-15 11:04:31 (3252): Guest Log: -rwxrwxrwx. 1 root root   7260160 Feb 15 10:04 result.tar.gz
2025-02-15 11:04:31 (3252): Guest Log: -rwxrwxrwx. 1 root root     17569 Feb 12 10:27 start_atlas.sh
2025-02-15 11:04:31 (3252): Guest Log:  *** Success! Shutting down the machine. ***
2025-02-15 11:04:31 (3252): VM Completion File Detected.
2025-02-15 11:04:31 (3252): Powering off VM.
2025-02-15 11:04:32 (3252): Successfully stopped VM.
2025-02-15 11:04:32 (3252): Deregistering VM. (boinc_92f9e89fbdba1707, slot#0)
2025-02-15 11:04:32 (3252): Removing network bandwidth throttle group from VM.
2025-02-15 11:04:32 (3252): Removing VM from VirtualBox.
11:04:38 (3252): called boinc_finish(0)

</stderr_txt>
]]>

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