Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-02-14 20:08:46 (33296): Detected: vboxwrapper 26206
2025-02-14 20:08:46 (33296): Detected: BOINC client v7.20.2
2025-02-14 20:08:46 (33296): Detected: VirtualBox VboxManage Interface (Version: 7.0.4)
2025-02-14 20:08:47 (33296): Successfully copied 'init_data.xml' to the shared directory.
2025-02-14 20:08:48 (33296): Create VM. (boinc_aae91f1b2f868926, slot#41)
2025-02-14 20:08:48 (33296): Setting Memory Size for VM. (4800MB)
2025-02-14 20:08:49 (33296): Setting CPU Count for VM. (8)
2025-02-14 20:08:49 (33296): Setting Chipset Options for VM.
2025-02-14 20:08:49 (33296): Setting Graphics Controller Options for VM.
2025-02-14 20:08:49 (33296): Setting Boot Options for VM.
2025-02-14 20:08:50 (33296): Setting Network Configuration for NAT.
2025-02-14 20:08:50 (33296): Enabling VM Network Access.
2025-02-14 20:08:50 (33296): Disabling USB Support for VM.
2025-02-14 20:08:50 (33296): Disabling COM Port Support for VM.
2025-02-14 20:08:51 (33296): Disabling LPT Port Support for VM.
2025-02-14 20:08:51 (33296): Disabling Audio Support for VM.
2025-02-14 20:08:51 (33296): Disabling Clipboard Support for VM.
2025-02-14 20:08:51 (33296): Disabling Drag and Drop Support for VM.
2025-02-14 20:08:52 (33296): Adding storage controller(s) to VM.
2025-02-14 20:08:52 (33296): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-02-14 20:08:52 (33296): Adding VirtualBox Guest Additions to VM.
2025-02-14 20:08:53 (33296): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-02-14 20:08:53 (33296): forwarding host port 52373 to guest port 80
2025-02-14 20:08:53 (33296): Enabling remote desktop for VM.
2025-02-14 20:08:53 (33296): Required extension pack not installed, remote desktop not enabled.
2025-02-14 20:08:53 (33296): Enabling shared directory for VM.
2025-02-14 20:08:54 (33296): Starting VM using VBoxManage interface. (boinc_aae91f1b2f868926, slot#41)
2025-02-14 20:09:05 (33296): Successfully started VM. (PID = '33044')
2025-02-14 20:09:05 (33296): Reporting VM Process ID to BOINC.
2025-02-14 20:09:05 (33296): Guest Log: BIOS: VirtualBox 7.0.4
2025-02-14 20:09:05 (33296): Guest Log: CPUID EDX: 0x178bfbff
2025-02-14 20:09:05 (33296): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-02-14 20:09:05 (33296): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-02-14 20:09:05 (33296): VM state change detected. (old = 'poweredoff', new = 'running')
2025-02-14 20:09:05 (33296): Detected: Web Application Enabled (http://localhost:52373)
2025-02-14 20:09:05 (33296): Preference change detected
2025-02-14 20:09:05 (33296): Setting CPU throttle for VM. (100%)
2025-02-14 20:09:05 (33296): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-02-14 20:09:07 (33296): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-02-14 20:09:07 (33296): Guest Log: BIOS: Booting from Hard Disk...
2025-02-14 20:09:11 (33296): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-02-14 20:09:11 (33296): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-02-14 20:09:11 (33296): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-02-14 20:09:11 (33296): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-02-14 20:09:11 (33296): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-02-14 20:09:11 (33296): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-02-14 20:09:11 (33296): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-02-14 20:09:11 (33296): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-02-14 20:09:11 (33296): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-02-14 20:09:11 (33296): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-02-14 20:09:11 (33296): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-02-14 20:09:11 (33296): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-02-14 20:09:11 (33296): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-02-14 20:09:11 (33296): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-02-14 20:09:11 (33296): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-02-14 20:09:11 (33296): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-02-14 20:09:11 (33296): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-02-14 20:09:11 (33296): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-02-14 20:09:11 (33296): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-02-14 20:09:11 (33296): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-02-14 20:09:11 (33296): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-02-14 20:09:11 (33296): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-02-14 20:09:11 (33296): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-02-14 20:09:11 (33296): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-02-14 20:09:11 (33296): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-02-14 20:09:11 (33296): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-02-14 20:09:11 (33296): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-02-14 20:09:11 (33296): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-02-14 20:09:11 (33296): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-02-14 20:09:11 (33296): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-02-14 20:09:11 (33296): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-02-14 20:09:11 (33296): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-02-14 20:09:29 (33296): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-02-14 20:09:29 (33296): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-02-14 20:09:55 (33296): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-02-14 20:09:55 (33296): Guest Log: 00:00:00.000373 main     Log opened 2025-02-14T20:09:53.328054000Z
2025-02-14 20:09:55 (33296): Guest Log: 00:00:00.000895 main     OS Product: Linux
2025-02-14 20:09:55 (33296): Guest Log: 00:00:00.000983 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-02-14 20:09:55 (33296): Guest Log: 00:00:00.001069 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-02-14 20:09:55 (33296): Guest Log: 00:00:00.001180 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-02-14 20:09:55 (33296): Guest Log: 00:00:00.001183 main     Process ID: 1367
2025-02-14 20:09:55 (33296): Guest Log: 00:00:00.001185 main     Package type: LINUX_64BITS_GENERIC
2025-02-14 20:09:55 (33296): Guest Log: 00:00:00.008347 main     5.2.32 r132073 started. Verbose level = 0
2025-02-14 20:09:55 (33296): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-02-14 20:09:55 (33296): Guest Log: [INFO] Mounting shared directory
2025-02-14 20:09:55 (33296): Guest Log: [INFO] Checking for init_data.xml
2025-02-14 20:10:05 (33296): Guest Log: 00:00:10.027926 timesync vgsvcTimeSyncWorker: Radical guest time change: -28 788 894 409 000ns (GuestNow=1 739 535 004 448 061 000 ns GuestLast=1 739 563 793 342 470 000 ns fSetTimeLastLoop=true )
2025-02-14 20:10:09 (33296): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-02-14 20:10:09 (33296): Guest Log: [INFO] Detected branch: prod
2025-02-14 20:10:10 (33296): Guest Log: This is the prod version of the ATLAS job wrapper
2025-02-14 20:10:10 (33296): Guest Log: Copying input files
2025-02-14 20:10:19 (33296): Guest Log: Copied input files into RunAtlas.
2025-02-14 20:10:19 (33296): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-02-14 20:10:19 (33296): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-02-14 20:10:19 (33296): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-02-14 20:10:19 (33296): Guest Log: Further information can be found at the LHC@home message board.
2025-02-14 20:10:36 (33296): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-02-14 20:10:39 (33296): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-02-14 20:10:39 (33296): Guest Log: 2.6.3.0 1666 0 30128 142637 4 1 3117296 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-02-14 20:10:41 (33296): Guest Log: copied the webapp to /var/www
2025-02-14 20:10:41 (33296): Guest Log: ATHENA_PROC_NUMBER=8
2025-02-14 20:10:41 (33296): Guest Log: ATHENA_CORE_NUMBER=8
2025-02-14 20:10:43 (33296): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-02-14 20:10:43 (33296): Guest Log:  *** Starting ATLAS job. (PandaID=6510560757 taskID=43092792) ***
2025-02-14 21:49:10 (33296): Status Report: Elapsed Time: '6000.000000'
2025-02-14 21:49:10 (33296): Status Report: CPU Time: '15407.390625'
2025-02-14 23:29:17 (33296): Status Report: Elapsed Time: '12000.000000'
2025-02-14 23:29:17 (33296): Status Report: CPU Time: '58713.359375'
2025-02-15 01:09:23 (33296): Status Report: Elapsed Time: '18000.000000'
2025-02-15 01:09:23 (33296): Status Report: CPU Time: '103877.265625'
2025-02-15 02:49:28 (33296): Status Report: Elapsed Time: '24000.000000'
2025-02-15 02:49:28 (33296): Status Report: CPU Time: '150955.546875'
2025-02-15 04:29:34 (33296): Status Report: Elapsed Time: '30000.000000'
2025-02-15 04:29:34 (33296): Status Report: CPU Time: '198218.500000'
2025-02-15 06:09:40 (33296): Status Report: Elapsed Time: '36000.000000'
2025-02-15 06:09:40 (33296): Status Report: CPU Time: '245459.484375'
2025-02-15 07:49:46 (33296): Status Report: Elapsed Time: '42000.000000'
2025-02-15 07:49:46 (33296): Status Report: CPU Time: '293063.406250'
2025-02-15 09:29:52 (33296): Status Report: Elapsed Time: '48000.000000'
2025-02-15 09:29:52 (33296): Status Report: CPU Time: '340723.593750'
2025-02-15 09:45:53 (33296): Guest Log:  *** Job finished ***
2025-02-15 09:45:53 (33296): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-02-15 09:45:53 (33296): Guest Log: 2025-02-15 01:45:39,834 | INFO     | [job] validate thread has finished
2025-02-15 09:45:53 (33296): Guest Log: 2025-02-15 01:45:39,835 | INFO     | [payload] control thread has finished
2025-02-15 09:45:53 (33296): Guest Log: 2025-02-15 01:45:41,394 | INFO     | [data] queue_monitor thread has finished
2025-02-15 09:45:53 (33296): Guest Log: 2025-02-15 01:45:42,875 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140538920580928)>', '<ExcThread(monitor, started 140537873020672)>']
2025-02-15 09:45:53 (33296): Guest Log: 2025-02-15 01:45:43,406 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-02-15 09:45:53 (33296): Guest Log: 2025-02-15 01:45:43,406 | INFO     | [monitor] control thread has ended
2025-02-15 09:45:53 (33296): Guest Log: 2025-02-15 01:45:47,878 | INFO     | all workflow threads have been joined
2025-02-15 09:45:53 (33296): Guest Log: 2025-02-15 01:45:47,878 | INFO     | end of generic workflow (traces error code: 0)
2025-02-15 09:45:53 (33296): Guest Log: 2025-02-15 01:45:47,879 | INFO     | traces error code: 0
2025-02-15 09:45:53 (33296): Guest Log: 2025-02-15 01:45:47,879 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-02-15 09:45:53 (33296): Guest Log: 2025-02-15 01:45:48,042 [wrapper] ==== pilot stdout END ====
2025-02-15 09:45:53 (33296): Guest Log: 2025-02-15 01:45:48,049 [wrapper] ==== wrapper stdout RESUME ====
2025-02-15 09:45:53 (33296): Guest Log: 2025-02-15 01:45:48,056 [wrapper] pilotpid: 6121
2025-02-15 09:45:53 (33296): Guest Log: 2025-02-15 01:45:48,063 [wrapper] Pilot exit status: 0
2025-02-15 09:45:53 (33296): Guest Log: 2025-02-15 01:45:49,940 [wrapper] pandaids: 6510560757
2025-02-15 09:45:53 (33296): Guest Log: 2025-02-15 01:45:49,996 [wrapper] cleanup supervisor_pilot 29378 6122
2025-02-15 09:45:53 (33296): Guest Log: 2025-02-15 01:45:50,004 [wrapper] Test setup, not cleaning
2025-02-15 09:45:53 (33296): Guest Log: 2025-02-15 01:45:50,017 [wrapper] apfmon messages muted
2025-02-15 09:45:53 (33296): Guest Log: 2025-02-15 01:45:50,024 [wrapper] ==== wrapper stdout END ====
2025-02-15 09:45:53 (33296): Guest Log: 2025-02-15 01:45:50,031 [wrapper] ==== wrapper stderr END ====
2025-02-15 09:45:53 (33296): Guest Log:  *** Error codes and diagnostics ***
2025-02-15 09:45:53 (33296): Guest Log:     "exeErrorCode": 0,
2025-02-15 09:45:53 (33296): Guest Log:     "exeErrorDiag": "",
2025-02-15 09:45:53 (33296): Guest Log:     "pilotErrorCode": 0,
2025-02-15 09:45:53 (33296): Guest Log:     "pilotErrorDiag": "",
2025-02-15 09:45:53 (33296): Guest Log:  *** Listing of results directory ***
2025-02-15 09:45:53 (33296): Guest Log: total 371268
2025-02-15 09:45:53 (33296): Guest Log: -rw-r--r--. 1 atlas atlas    491065 Feb 12 03:26 pilot3.tar.gz
2025-02-15 09:45:53 (33296): Guest Log: -rwx------. 1 atlas atlas     34924 Feb 12 04:11 runpilot2-wrapper.sh
2025-02-15 09:45:53 (33296): Guest Log: -rw-r--r--. 1 atlas atlas      5118 Feb 12 04:11 queuedata.json
2025-02-15 09:45:53 (33296): Guest Log: -rwxr-xr-x. 1 atlas atlas      8766 Feb 14 12:10 init_data.xml
2025-02-15 09:45:53 (33296): Guest Log: -rwxr-xr-x. 1 atlas atlas    503500 Feb 14 12:10 input.tar.gz
2025-02-15 09:45:53 (33296): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Feb 14 12:10 start_atlas.sh
2025-02-15 09:45:53 (33296): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb 14 12:10 EVNT.43092790._000021.pool.root.1 -> /data/./ATLAS.root_0
2025-02-15 09:45:53 (33296): Guest Log: -rw-r--r--. 1 atlas atlas      2553 Feb 14 12:10 pandaJob.out
2025-02-15 09:45:53 (33296): Guest Log: -rw-------. 1 atlas atlas       424 Feb 14 12:12 setup.sh.local
2025-02-15 09:45:53 (33296): Guest Log: -rw-------. 1 atlas atlas    986937 Feb 14 12:18 agis_schedconf.cvmfs.json
2025-02-15 09:45:53 (33296): Guest Log: drwx------. 4 atlas atlas      4096 Feb 14 12:19 pilot3
2025-02-15 09:45:53 (33296): Guest Log: -rw-------. 1 atlas atlas 361869215 Feb 15 01:43 HITS.43092792._001975.pool.root.1
2025-02-15 09:45:53 (33296): Guest Log: -rw-------. 1 atlas atlas      1031 Feb 15 01:44 memory_monitor_summary.json
2025-02-15 09:45:53 (33296): Guest Log: -rw-------. 1 atlas atlas   1593946 Feb 15 01:45 agis_ddmendpoints.agis.ALL.json
2025-02-15 09:45:53 (33296): Guest Log: -rw-------. 1 atlas atlas    767038 Feb 15 01:45 log.43092792._001975.job.log.tgz.1
2025-02-15 09:45:53 (33296): Guest Log: -rw-------. 1 atlas atlas        96 Feb 15 01:45 pilot_heartbeat.json
2025-02-15 09:45:53 (33296): Guest Log: -rw-------. 1 atlas atlas      7753 Feb 15 01:45 heartbeat.json
2025-02-15 09:45:53 (33296): Guest Log: -rw-------. 1 atlas atlas      4398 Feb 15 01:45 pilotlog.txt
2025-02-15 09:45:53 (33296): Guest Log: -rw-------. 1 atlas atlas   6510902 Feb 15 01:45 log.43092792._001975.job.log.1
2025-02-15 09:45:53 (33296): Guest Log: -rw-------. 1 atlas atlas       357 Feb 15 01:45 output.list
2025-02-15 09:45:53 (33296): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb 15 01:45 runtime_log
2025-02-15 09:45:53 (33296): Guest Log: -rw-------. 1 atlas atlas   7301120 Feb 15 01:45 result.tar.gz
2025-02-15 09:45:53 (33296): Guest Log: -rw-r--r--. 1 atlas atlas     10948 Feb 15 01:45 runtime_log.err
2025-02-15 09:45:53 (33296): Guest Log: -rw-------. 1 atlas atlas       664 Feb 15 01:45 GX3LDmtGJ26nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmXcXKDmCiIyen.diag
2025-02-15 09:45:53 (33296): Guest Log: Looking for outputfile HITS.43092792._001975.pool.root.1
2025-02-15 09:45:53 (33296): Guest Log: HITS file was successfully produced
2025-02-15 09:45:53 (33296): Guest Log: -rw-------. 1 atlas atlas 361869215 Feb 15 01:43 /home/atlas/RunAtlas/HITS.43092792._001975.pool.root.1
2025-02-15 09:45:56 (33296): Guest Log: Successfully finished the ATLAS job!
2025-02-15 09:45:56 (33296): Guest Log: Copying the results back to the shared directory!
2025-02-15 09:45:56 (33296): Guest Log:  *** Contents of shared directory: ***
2025-02-15 09:45:56 (33296): Guest Log: total 702584
2025-02-15 09:45:56 (33296): Guest Log: -rwxrwxrwx. 1 root root 349733235 Feb 14 12:08 ATLAS.root_0
2025-02-15 09:45:56 (33296): Guest Log: -rwxrwxrwx. 1 root root 361869215 Feb 15 01:45 HITS.pool.root.1
2025-02-15 09:45:56 (33296): Guest Log: -rwxrwxrwx. 1 root root      8766 Feb 14 12:08 init_data.xml
2025-02-15 09:45:56 (33296): Guest Log: -rwxrwxrwx. 1 root root    503500 Feb 12 07:27 input.tar.gz
2025-02-15 09:45:56 (33296): Guest Log: -rwxrwxrwx. 1 root root   7301120 Feb 15 01:45 result.tar.gz
2025-02-15 09:45:56 (33296): Guest Log: -rwxrwxrwx. 1 root root     17569 Feb 12 07:27 start_atlas.sh
2025-02-15 09:45:56 (33296): Guest Log:  *** Success! Shutting down the machine. ***
2025-02-15 09:45:56 (33296): VM Completion File Detected.
2025-02-15 09:45:56 (33296): Powering off VM.
2025-02-15 09:45:57 (33296): Successfully stopped VM.
2025-02-15 09:45:57 (33296): Deregistering VM. (boinc_aae91f1b2f868926, slot#41)
2025-02-15 09:45:57 (33296): Removing network bandwidth throttle group from VM.
2025-02-15 09:45:57 (33296): Removing VM from VirtualBox.
09:46:03 (33296): called boinc_finish(0)

</stderr_txt>
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