Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-02-13 02:02:57 (6712): Detected: vboxwrapper 26206
2025-02-13 02:02:57 (6712): Detected: BOINC client v8.0.2
2025-02-13 02:02:58 (6712): Detected: VirtualBox VboxManage Interface (Version: 6.1.36)
2025-02-13 02:02:58 (6712): Successfully copied 'init_data.xml' to the shared directory.
2025-02-13 02:02:59 (6712): Create VM. (boinc_0bc481b75c3db467, slot#0)
2025-02-13 02:03:00 (6712): Setting Memory Size for VM. (4200MB)
2025-02-13 02:03:00 (6712): Setting CPU Count for VM. (2)
2025-02-13 02:03:00 (6712): Setting Chipset Options for VM.
2025-02-13 02:03:00 (6712): Setting Graphics Controller Options for VM.
2025-02-13 02:03:01 (6712): Setting Boot Options for VM.
2025-02-13 02:03:01 (6712): Setting Network Configuration for NAT.
2025-02-13 02:03:01 (6712): Enabling VM Network Access.
2025-02-13 02:03:02 (6712): Disabling USB Support for VM.
2025-02-13 02:03:02 (6712): Disabling COM Port Support for VM.
2025-02-13 02:03:02 (6712): Disabling LPT Port Support for VM.
2025-02-13 02:03:02 (6712): Disabling Audio Support for VM.
2025-02-13 02:03:03 (6712): Disabling Clipboard Support for VM.
2025-02-13 02:03:03 (6712): Disabling Drag and Drop Support for VM.
2025-02-13 02:03:03 (6712): Adding storage controller(s) to VM.
2025-02-13 02:03:04 (6712): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-02-13 02:03:04 (6712): Adding VirtualBox Guest Additions to VM.
2025-02-13 02:03:04 (6712): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-02-13 02:03:05 (6712): forwarding host port 59724 to guest port 80
2025-02-13 02:03:05 (6712): Enabling remote desktop for VM.
2025-02-13 02:03:06 (6712): Enabling shared directory for VM.
2025-02-13 02:03:06 (6712): Starting VM using VBoxManage interface. (boinc_0bc481b75c3db467, slot#0)
2025-02-13 02:03:13 (6712): Successfully started VM. (PID = '4672')
2025-02-13 02:03:13 (6712): Reporting VM Process ID to BOINC.
2025-02-13 02:03:13 (6712): Guest Log: BIOS: VirtualBox 6.1.36
2025-02-13 02:03:13 (6712): Guest Log: CPUID EDX: 0x178bfbff
2025-02-13 02:03:13 (6712): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-02-13 02:03:13 (6712): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-02-13 02:03:13 (6712): VM state change detected. (old = 'poweredoff', new = 'running')
2025-02-13 02:03:13 (6712): Detected: Web Application Enabled (http://localhost:59724)
2025-02-13 02:03:13 (6712): Detected: Remote Desktop Enabled (localhost:59725)
2025-02-13 02:03:13 (6712): Preference change detected
2025-02-13 02:03:13 (6712): Setting CPU throttle for VM. (100%)
2025-02-13 02:03:14 (6712): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 600 seconds) or (Vbox_job.xml: 900 seconds))
2025-02-13 02:03:15 (6712): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-02-13 02:03:15 (6712): Guest Log: BIOS: Booting from Hard Disk...
2025-02-13 02:03:18 (6712): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-02-13 02:03:18 (6712): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-02-13 02:03:18 (6712): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-02-13 02:03:18 (6712): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-02-13 02:03:18 (6712): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-02-13 02:03:18 (6712): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-02-13 02:03:18 (6712): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-02-13 02:03:18 (6712): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-02-13 02:03:18 (6712): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-02-13 02:03:18 (6712): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-02-13 02:03:18 (6712): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-02-13 02:03:18 (6712): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-02-13 02:03:18 (6712): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-02-13 02:03:18 (6712): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-02-13 02:03:18 (6712): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-02-13 02:03:18 (6712): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-02-13 02:03:18 (6712): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-02-13 02:03:18 (6712): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-02-13 02:03:18 (6712): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-02-13 02:03:18 (6712): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-02-13 02:03:18 (6712): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-02-13 02:03:18 (6712): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-02-13 02:03:18 (6712): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-02-13 02:03:18 (6712): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-02-13 02:03:18 (6712): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-02-13 02:03:18 (6712): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-02-13 02:03:18 (6712): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-02-13 02:03:18 (6712): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-02-13 02:03:18 (6712): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-02-13 02:03:18 (6712): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-02-13 02:03:18 (6712): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-02-13 02:03:18 (6712): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-02-13 02:03:22 (6712): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-02-13 02:03:22 (6712): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-02-13 02:03:29 (6712): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-02-13 02:03:29 (6712): Guest Log: 00:00:00.000233 main     Log opened 2025-02-13T02:03:27.668528000Z
2025-02-13 02:03:29 (6712): Guest Log: 00:00:00.000386 main     OS Product: Linux
2025-02-13 02:03:29 (6712): Guest Log: 00:00:00.000439 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-02-13 02:03:29 (6712): Guest Log: 00:00:00.000484 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-02-13 02:03:29 (6712): Guest Log: 00:00:00.000530 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-02-13 02:03:29 (6712): Guest Log: 00:00:00.000531 main     Process ID: 1258
2025-02-13 02:03:29 (6712): Guest Log: 00:00:00.000532 main     Package type: LINUX_64BITS_GENERIC
2025-02-13 02:03:29 (6712): Guest Log: 00:00:00.001722 main     5.2.32 r132073 started. Verbose level = 0
2025-02-13 02:03:29 (6712): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-02-13 02:03:29 (6712): Guest Log: [INFO] Mounting shared directory
2025-02-13 02:03:29 (6712): Guest Log: [INFO] Checking for init_data.xml
2025-02-13 02:03:32 (6712): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-02-13 02:03:32 (6712): Guest Log: [INFO] Detected branch: prod
2025-02-13 02:03:32 (6712): Guest Log: This is the prod version of the ATLAS job wrapper
2025-02-13 02:03:32 (6712): Guest Log: Copying input files
2025-02-13 02:03:34 (6712): Guest Log: Copied input files into RunAtlas.
2025-02-13 02:03:34 (6712): Guest Log: Detected user-configured HTTP proxy at http://192.168.35.184:3128 - will set in /etc/cvmfs/default.local
2025-02-13 02:03:39 (6712): Guest Log: 00:00:10.008470 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 185 761 000ns (GuestNow=1 739 408 619 486 973 000 ns GuestLast=1 739 412 207 672 734 000 ns fSetTimeLastLoop=true )
2025-02-13 02:03:45 (6712): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-02-13 02:03:45 (6712): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-02-13 02:03:45 (6712): Guest Log: 2.6.3.0 1528 0 31628 142580 3 1 3117296 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.35.184:3128 1
2025-02-13 02:03:46 (6712): Guest Log: copied the webapp to /var/www
2025-02-13 02:03:46 (6712): Guest Log: ATHENA_PROC_NUMBER=2
2025-02-13 02:03:46 (6712): Guest Log: ATHENA_CORE_NUMBER=2
2025-02-13 02:03:46 (6712): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-02-13 02:03:46 (6712): Guest Log:  *** Starting ATLAS job. (PandaID=6510416198 taskID=43078919) ***
2025-02-13 03:43:22 (6712): Status Report: Elapsed Time: '6000.000000'
2025-02-13 03:43:22 (6712): Status Report: CPU Time: '11154.726704'
2025-02-13 05:23:27 (6712): Status Report: Elapsed Time: '12000.000000'
2025-02-13 05:23:27 (6712): Status Report: CPU Time: '23149.471993'
2025-02-13 07:03:27 (6712): Status Report: Elapsed Time: '18000.000000'
2025-02-13 07:03:27 (6712): Status Report: CPU Time: '35141.471664'
2025-02-13 08:43:42 (6712): Status Report: Elapsed Time: '24000.000000'
2025-02-13 08:43:42 (6712): Status Report: CPU Time: '47111.896397'
2025-02-13 10:23:46 (6712): Status Report: Elapsed Time: '30000.000000'
2025-02-13 10:23:46 (6712): Status Report: CPU Time: '59107.608893'
2025-02-13 12:03:57 (6712): Status Report: Elapsed Time: '36000.000000'
2025-02-13 12:03:57 (6712): Status Report: CPU Time: '71111.792242'
2025-02-13 13:43:59 (6712): Status Report: Elapsed Time: '42000.000000'
2025-02-13 13:43:59 (6712): Status Report: CPU Time: '83106.194329'
2025-02-13 15:24:02 (6712): Status Report: Elapsed Time: '48000.000000'
2025-02-13 15:24:02 (6712): Status Report: CPU Time: '95104.137638'
2025-02-13 16:20:59 (6712): Guest Log:  *** Job finished ***
2025-02-13 16:20:59 (6712): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-02-13 16:20:59 (6712): Guest Log: 2025-02-13 15:20:47,715 | INFO     | [job] create_data_payload thread has finished
2025-02-13 16:20:59 (6712): Guest Log: 2025-02-13 15:20:47,946 | INFO     | [data] copytool_in thread has finished
2025-02-13 16:20:59 (6712): Guest Log: 2025-02-13 15:20:49,560 | INFO     | [data] queue_monitor thread has finished
2025-02-13 16:20:59 (6712): Guest Log: 2025-02-13 15:20:50,551 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139749677168448)>', '<ExcThread(monitor, started 139748639241984)>']
2025-02-13 16:20:59 (6712): Guest Log: 2025-02-13 15:20:51,175 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-02-13 16:20:59 (6712): Guest Log: 2025-02-13 15:20:51,176 | INFO     | [monitor] control thread has ended
2025-02-13 16:20:59 (6712): Guest Log: 2025-02-13 15:20:55,556 | INFO     | all workflow threads have been joined
2025-02-13 16:20:59 (6712): Guest Log: 2025-02-13 15:20:55,557 | INFO     | end of generic workflow (traces error code: 0)
2025-02-13 16:20:59 (6712): Guest Log: 2025-02-13 15:20:55,557 | INFO     | traces error code: 0
2025-02-13 16:20:59 (6712): Guest Log: 2025-02-13 15:20:55,557 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-02-13 16:20:59 (6712): Guest Log: 2025-02-13 15:20:55,664 [wrapper] ==== pilot stdout END ====
2025-02-13 16:20:59 (6712): Guest Log: 2025-02-13 15:20:55,669 [wrapper] ==== wrapper stdout RESUME ====
2025-02-13 16:20:59 (6712): Guest Log: 2025-02-13 15:20:55,674 [wrapper] pilotpid: 5855
2025-02-13 16:20:59 (6712): Guest Log: 2025-02-13 15:20:55,679 [wrapper] Pilot exit status: 0
2025-02-13 16:20:59 (6712): Guest Log: 2025-02-13 15:20:55,721 [wrapper] pandaids: 6510416198
2025-02-13 16:20:59 (6712): Guest Log: 2025-02-13 15:20:55,753 [wrapper] cleanup supervisor_pilot 16619 5856
2025-02-13 16:20:59 (6712): Guest Log: 2025-02-13 15:20:55,758 [wrapper] Test setup, not cleaning
2025-02-13 16:20:59 (6712): Guest Log: 2025-02-13 15:20:55,768 [wrapper] apfmon messages muted
2025-02-13 16:20:59 (6712): Guest Log: 2025-02-13 15:20:55,772 [wrapper] ==== wrapper stdout END ====
2025-02-13 16:20:59 (6712): Guest Log: 2025-02-13 15:20:55,777 [wrapper] ==== wrapper stderr END ====
2025-02-13 16:20:59 (6712): Guest Log:  *** Error codes and diagnostics ***
2025-02-13 16:20:59 (6712): Guest Log:     "exeErrorCode": 0,
2025-02-13 16:20:59 (6712): Guest Log:     "exeErrorDiag": "",
2025-02-13 16:20:59 (6712): Guest Log:     "pilotErrorCode": 0,
2025-02-13 16:20:59 (6712): Guest Log:     "pilotErrorDiag": "",
2025-02-13 16:20:59 (6712): Guest Log:  *** Listing of results directory ***
2025-02-13 16:20:59 (6712): Guest Log: total 339656
2025-02-13 16:20:59 (6712): Guest Log: -rw-r--r--. 1 atlas atlas    491065 Feb 11 17:23 pilot3.tar.gz
2025-02-13 16:20:59 (6712): Guest Log: -rw-r--r--. 1 atlas atlas      5118 Feb 11 18:11 queuedata.json
2025-02-13 16:20:59 (6712): Guest Log: -rwx------. 1 atlas atlas     34924 Feb 11 18:11 runpilot2-wrapper.sh
2025-02-13 16:20:59 (6712): Guest Log: -rwxr-xr-x. 1 atlas atlas      8441 Feb 13 01:03 init_data.xml
2025-02-13 16:20:59 (6712): Guest Log: -rwxr-xr-x. 1 atlas atlas    503499 Feb 13 01:03 input.tar.gz
2025-02-13 16:20:59 (6712): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Feb 13 01:03 start_atlas.sh
2025-02-13 16:20:59 (6712): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb 13 01:03 EVNT.43078917._000306.pool.root.1 -> /data/./ATLAS.root_0
2025-02-13 16:20:59 (6712): Guest Log: -rw-r--r--. 1 atlas atlas      2547 Feb 13 01:03 pandaJob.out
2025-02-13 16:20:59 (6712): Guest Log: -rw-------. 1 atlas atlas       461 Feb 13 01:03 setup.sh.local
2025-02-13 16:20:59 (6712): Guest Log: -rw-------. 1 atlas atlas    986918 Feb 13 01:04 agis_schedconf.cvmfs.json
2025-02-13 16:20:59 (6712): Guest Log: drwx------. 4 atlas atlas      4096 Feb 13 01:04 pilot3
2025-02-13 16:20:59 (6712): Guest Log: -rw-------. 1 atlas atlas 329697304 Feb 13 15:19 HITS.43078919._018399.pool.root.1
2025-02-13 16:20:59 (6712): Guest Log: -rw-------. 1 atlas atlas        95 Feb 13 15:20 pilot_heartbeat.json
2025-02-13 16:20:59 (6712): Guest Log: -rw-------. 1 atlas atlas      1023 Feb 13 15:20 memory_monitor_summary.json
2025-02-13 16:20:59 (6712): Guest Log: -rw-------. 1 atlas atlas   1591814 Feb 13 15:20 agis_ddmendpoints.agis.ALL.json
2025-02-13 16:20:59 (6712): Guest Log: -rw-------. 1 atlas atlas    733518 Feb 13 15:20 log.43078919._018399.job.log.tgz.1
2025-02-13 16:20:59 (6712): Guest Log: -rw-------. 1 atlas atlas      7729 Feb 13 15:20 heartbeat.json
2025-02-13 16:20:59 (6712): Guest Log: -rw-------. 1 atlas atlas      4275 Feb 13 15:20 pilotlog.txt
2025-02-13 16:20:59 (6712): Guest Log: -rw-------. 1 atlas atlas   6450900 Feb 13 15:20 log.43078919._018399.job.log.1
2025-02-13 16:20:59 (6712): Guest Log: -rw-------. 1 atlas atlas       357 Feb 13 15:20 output.list
2025-02-13 16:20:59 (6712): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb 13 15:20 runtime_log
2025-02-13 16:20:59 (6712): Guest Log: -rw-------. 1 atlas atlas   7198720 Feb 13 15:20 result.tar.gz
2025-02-13 16:20:59 (6712): Guest Log: -rw-r--r--. 1 atlas atlas     11326 Feb 13 15:20 runtime_log.err
2025-02-13 16:20:59 (6712): Guest Log: -rw-------. 1 atlas atlas       666 Feb 13 15:20 1aNNDmqu916nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmHkWKDmlgwVfn.diag
2025-02-13 16:20:59 (6712): Guest Log: Looking for outputfile HITS.43078919._018399.pool.root.1
2025-02-13 16:20:59 (6712): Guest Log: HITS file was successfully produced
2025-02-13 16:20:59 (6712): Guest Log: -rw-------. 1 atlas atlas 329697304 Feb 13 15:19 /home/atlas/RunAtlas/HITS.43078919._018399.pool.root.1
2025-02-13 16:21:01 (6712): Guest Log: Successfully finished the ATLAS job!
2025-02-13 16:21:01 (6712): Guest Log: Copying the results back to the shared directory!
2025-02-13 16:21:01 (6712): Guest Log:  *** Contents of shared directory: ***
2025-02-13 16:21:01 (6712): Guest Log: total 666004
2025-02-13 16:21:01 (6712): Guest Log: -rwxrwxrwx. 1 root root 344550916 Feb 13 01:02 ATLAS.root_0
2025-02-13 16:21:01 (6712): Guest Log: -rwxrwxrwx. 1 root root 329697304 Feb 13 15:21 HITS.pool.root.1
2025-02-13 16:21:01 (6712): Guest Log: -rwxrwxrwx. 1 root root      8441 Feb 13 01:02 init_data.xml
2025-02-13 16:21:01 (6712): Guest Log: -rwxrwxrwx. 1 root root    503499 Feb 11 20:21 input.tar.gz
2025-02-13 16:21:01 (6712): Guest Log: -rwxrwxrwx. 1 root root   7198720 Feb 13 15:21 result.tar.gz
2025-02-13 16:21:01 (6712): Guest Log: -rwxrwxrwx. 1 root root     17569 Feb 11 20:21 start_atlas.sh
2025-02-13 16:21:01 (6712): Guest Log:  *** Success! Shutting down the machine. ***
2025-02-13 16:21:01 (6712): VM Completion File Detected.
2025-02-13 16:21:01 (6712): Powering off VM.
2025-02-13 16:21:02 (6712): Successfully stopped VM.
2025-02-13 16:21:02 (6712): Deregistering VM. (boinc_0bc481b75c3db467, slot#0)
2025-02-13 16:21:02 (6712): Removing network bandwidth throttle group from VM.
2025-02-13 16:21:02 (6712): Removing VM from VirtualBox.
16:21:07 (6712): called boinc_finish(0)

</stderr_txt>
]]>

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