Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-02-14 06:30:02 (8132): Detected: vboxwrapper 26206
2025-02-14 06:30:02 (8132): Detected: BOINC client v8.0.2
2025-02-14 06:30:03 (8132): Detected: VirtualBox VboxManage Interface (Version: 6.1.36)
2025-02-14 06:30:03 (8132): Successfully copied 'init_data.xml' to the shared directory.
2025-02-14 06:30:03 (8132): Create VM. (boinc_e3cf2899a7e3fbf8, slot#0)
2025-02-14 06:30:04 (8132): Setting Memory Size for VM. (4200MB)
2025-02-14 06:30:04 (8132): Setting CPU Count for VM. (2)
2025-02-14 06:30:05 (8132): Setting Chipset Options for VM.
2025-02-14 06:30:05 (8132): Setting Graphics Controller Options for VM.
2025-02-14 06:30:05 (8132): Setting Boot Options for VM.
2025-02-14 06:30:06 (8132): Setting Network Configuration for NAT.
2025-02-14 06:30:06 (8132): Enabling VM Network Access.
2025-02-14 06:30:06 (8132): Disabling USB Support for VM.
2025-02-14 06:30:06 (8132): Disabling COM Port Support for VM.
2025-02-14 06:30:07 (8132): Disabling LPT Port Support for VM.
2025-02-14 06:30:07 (8132): Disabling Audio Support for VM.
2025-02-14 06:30:07 (8132): Disabling Clipboard Support for VM.
2025-02-14 06:30:08 (8132): Disabling Drag and Drop Support for VM.
2025-02-14 06:30:08 (8132): Adding storage controller(s) to VM.
2025-02-14 06:30:08 (8132): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-02-14 06:30:09 (8132): Adding VirtualBox Guest Additions to VM.
2025-02-14 06:30:09 (8132): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-02-14 06:30:10 (8132): forwarding host port 49417 to guest port 80
2025-02-14 06:30:10 (8132): Enabling remote desktop for VM.
2025-02-14 06:30:10 (8132): Enabling shared directory for VM.
2025-02-14 06:30:11 (8132): Starting VM using VBoxManage interface. (boinc_e3cf2899a7e3fbf8, slot#0)
2025-02-14 06:30:17 (8132): Successfully started VM. (PID = '10956')
2025-02-14 06:30:17 (8132): Reporting VM Process ID to BOINC.
2025-02-14 06:30:17 (8132): Guest Log: BIOS: VirtualBox 6.1.36
2025-02-14 06:30:17 (8132): Guest Log: CPUID EDX: 0x178bfbff
2025-02-14 06:30:17 (8132): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-02-14 06:30:17 (8132): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-02-14 06:30:17 (8132): VM state change detected. (old = 'poweredoff', new = 'running')
2025-02-14 06:30:17 (8132): Detected: Web Application Enabled (http://localhost:49417)
2025-02-14 06:30:17 (8132): Detected: Remote Desktop Enabled (localhost:49418)
2025-02-14 06:30:17 (8132): Preference change detected
2025-02-14 06:30:17 (8132): Setting CPU throttle for VM. (100%)
2025-02-14 06:30:17 (8132): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 600 seconds) or (Vbox_job.xml: 900 seconds))
2025-02-14 06:30:19 (8132): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-02-14 06:30:19 (8132): Guest Log: BIOS: Booting from Hard Disk...
2025-02-14 06:30:22 (8132): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-02-14 06:30:22 (8132): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-02-14 06:30:22 (8132): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-02-14 06:30:22 (8132): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-02-14 06:30:22 (8132): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-02-14 06:30:22 (8132): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-02-14 06:30:22 (8132): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-02-14 06:30:22 (8132): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-02-14 06:30:22 (8132): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-02-14 06:30:22 (8132): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-02-14 06:30:22 (8132): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-02-14 06:30:22 (8132): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-02-14 06:30:22 (8132): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-02-14 06:30:22 (8132): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-02-14 06:30:22 (8132): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-02-14 06:30:22 (8132): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-02-14 06:30:22 (8132): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-02-14 06:30:22 (8132): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-02-14 06:30:22 (8132): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-02-14 06:30:22 (8132): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-02-14 06:30:22 (8132): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-02-14 06:30:22 (8132): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-02-14 06:30:22 (8132): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-02-14 06:30:22 (8132): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-02-14 06:30:22 (8132): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-02-14 06:30:22 (8132): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-02-14 06:30:22 (8132): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-02-14 06:30:22 (8132): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-02-14 06:30:22 (8132): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-02-14 06:30:22 (8132): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-02-14 06:30:22 (8132): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-02-14 06:30:22 (8132): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-02-14 06:30:27 (8132): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-02-14 06:30:27 (8132): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-02-14 06:30:34 (8132): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-02-14 06:30:34 (8132): Guest Log: 00:00:00.000180 main     Log opened 2025-02-14T06:30:32.636403000Z
2025-02-14 06:30:34 (8132): Guest Log: 00:00:00.000344 main     OS Product: Linux
2025-02-14 06:30:34 (8132): Guest Log: 00:00:00.000412 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-02-14 06:30:34 (8132): Guest Log: 00:00:00.000458 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-02-14 06:30:34 (8132): Guest Log: 00:00:00.000503 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-02-14 06:30:34 (8132): Guest Log: 00:00:00.000504 main     Process ID: 1261
2025-02-14 06:30:34 (8132): Guest Log: 00:00:00.000504 main     Package type: LINUX_64BITS_GENERIC
2025-02-14 06:30:34 (8132): Guest Log: 00:00:00.001281 main     5.2.32 r132073 started. Verbose level = 0
2025-02-14 06:30:34 (8132): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-02-14 06:30:34 (8132): Guest Log: [INFO] Mounting shared directory
2025-02-14 06:30:34 (8132): Guest Log: [INFO] Checking for init_data.xml
2025-02-14 06:30:36 (8132): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-02-14 06:30:36 (8132): Guest Log: [INFO] Detected branch: prod
2025-02-14 06:30:36 (8132): Guest Log: This is the prod version of the ATLAS job wrapper
2025-02-14 06:30:36 (8132): Guest Log: Copying input files
2025-02-14 06:30:39 (8132): Guest Log: Copied input files into RunAtlas.
2025-02-14 06:30:39 (8132): Guest Log: Detected user-configured HTTP proxy at http://192.168.35.184:3128 - will set in /etc/cvmfs/default.local
2025-02-14 06:30:44 (8132): Guest Log: 00:00:10.004593 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 811 409 000ns (GuestNow=1 739 511 043 829 188 000 ns GuestLast=1 739 514 632 640 597 000 ns fSetTimeLastLoop=true )
2025-02-14 06:30:49 (8132): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-02-14 06:30:49 (8132): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-02-14 06:30:49 (8132): Guest Log: 2.6.3.0 1534 0 29504 142627 3 1 3117296 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.35.184:3128 1
2025-02-14 06:30:50 (8132): Guest Log: copied the webapp to /var/www
2025-02-14 06:30:50 (8132): Guest Log: ATHENA_PROC_NUMBER=2
2025-02-14 06:30:50 (8132): Guest Log: ATHENA_CORE_NUMBER=2
2025-02-14 06:30:50 (8132): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-02-14 06:30:50 (8132): Guest Log:  *** Starting ATLAS job. (PandaID=6510416544 taskID=43078919) ***
2025-02-14 08:10:20 (8132): Status Report: Elapsed Time: '6000.000000'
2025-02-14 08:10:20 (8132): Status Report: CPU Time: '11179.078460'
2025-02-14 09:50:33 (8132): Status Report: Elapsed Time: '12000.000000'
2025-02-14 09:50:33 (8132): Status Report: CPU Time: '23180.391391'
2025-02-14 11:30:40 (8132): Status Report: Elapsed Time: '18000.000000'
2025-02-14 11:30:40 (8132): Status Report: CPU Time: '35183.747935'
2025-02-14 13:10:51 (8132): Status Report: Elapsed Time: '24000.000000'
2025-02-14 13:10:51 (8132): Status Report: CPU Time: '47195.715735'
2025-02-14 14:50:54 (8132): Status Report: Elapsed Time: '30000.000000'
2025-02-14 14:50:54 (8132): Status Report: CPU Time: '59190.710625'
2025-02-14 16:31:03 (8132): Status Report: Elapsed Time: '36000.000000'
2025-02-14 16:31:03 (8132): Status Report: CPU Time: '71198.669199'
2025-02-14 18:11:26 (8132): Status Report: Elapsed Time: '42000.000000'
2025-02-14 18:11:26 (8132): Status Report: CPU Time: '83226.127897'
2025-02-14 19:51:48 (8132): Status Report: Elapsed Time: '48000.000000'
2025-02-14 19:51:48 (8132): Status Report: CPU Time: '95225.834018'
2025-02-14 20:24:30 (8132): Guest Log:  *** Job finished ***
2025-02-14 20:24:30 (8132): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-02-14 20:24:30 (8132): Guest Log: 2025-02-14 19:24:20,209 | INFO     | [job] validate thread has finished
2025-02-14 20:24:30 (8132): Guest Log: 2025-02-14 19:24:20,324 | INFO     | [payload] failed_post thread has finished
2025-02-14 20:24:30 (8132): Guest Log: 2025-02-14 19:24:21,840 | INFO     | [data] queue_monitor thread has finished
2025-02-14 20:24:30 (8132): Guest Log: 2025-02-14 19:24:23,535 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140253278254912)>', '<ExcThread(monitor, started 140252610025216)>']
2025-02-14 20:24:30 (8132): Guest Log: 2025-02-14 19:24:23,844 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-02-14 20:24:30 (8132): Guest Log: 2025-02-14 19:24:23,844 | INFO     | [monitor] control thread has ended
2025-02-14 20:24:30 (8132): Guest Log: 2025-02-14 19:24:28,541 | INFO     | all workflow threads have been joined
2025-02-14 20:24:30 (8132): Guest Log: 2025-02-14 19:24:28,542 | INFO     | end of generic workflow (traces error code: 0)
2025-02-14 20:24:30 (8132): Guest Log: 2025-02-14 19:24:28,542 | INFO     | traces error code: 0
2025-02-14 20:24:30 (8132): Guest Log: 2025-02-14 19:24:28,542 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-02-14 20:24:30 (8132): Guest Log: 2025-02-14 19:24:28,659 [wrapper] ==== pilot stdout END ====
2025-02-14 20:24:30 (8132): Guest Log: 2025-02-14 19:24:28,664 [wrapper] ==== wrapper stdout RESUME ====
2025-02-14 20:24:30 (8132): Guest Log: 2025-02-14 19:24:28,669 [wrapper] pilotpid: 5860
2025-02-14 20:24:30 (8132): Guest Log: 2025-02-14 19:24:28,674 [wrapper] Pilot exit status: 0
2025-02-14 20:24:30 (8132): Guest Log: 2025-02-14 19:24:28,762 [wrapper] pandaids: 6510416544
2025-02-14 20:24:30 (8132): Guest Log: 2025-02-14 19:24:28,798 [wrapper] cleanup supervisor_pilot 24279 5861
2025-02-14 20:24:30 (8132): Guest Log: 2025-02-14 19:24:28,804 [wrapper] Test setup, not cleaning
2025-02-14 20:24:30 (8132): Guest Log: 2025-02-14 19:24:28,815 [wrapper] apfmon messages muted
2025-02-14 20:24:30 (8132): Guest Log: 2025-02-14 19:24:28,820 [wrapper] ==== wrapper stdout END ====
2025-02-14 20:24:30 (8132): Guest Log: 2025-02-14 19:24:28,826 [wrapper] ==== wrapper stderr END ====
2025-02-14 20:24:30 (8132): Guest Log:  *** Error codes and diagnostics ***
2025-02-14 20:24:30 (8132): Guest Log:     "exeErrorCode": 0,
2025-02-14 20:24:30 (8132): Guest Log:     "exeErrorDiag": "",
2025-02-14 20:24:30 (8132): Guest Log:     "pilotErrorCode": 0,
2025-02-14 20:24:30 (8132): Guest Log:     "pilotErrorDiag": "",
2025-02-14 20:24:30 (8132): Guest Log:  *** Listing of results directory ***
2025-02-14 20:24:30 (8132): Guest Log: total 333668
2025-02-14 20:24:30 (8132): Guest Log: -rw-r--r--. 1 atlas atlas    491065 Feb 11 17:23 pilot3.tar.gz
2025-02-14 20:24:30 (8132): Guest Log: -rw-r--r--. 1 atlas atlas      5118 Feb 11 18:11 queuedata.json
2025-02-14 20:24:30 (8132): Guest Log: -rwx------. 1 atlas atlas     34924 Feb 11 18:11 runpilot2-wrapper.sh
2025-02-14 20:24:30 (8132): Guest Log: -rwxr-xr-x. 1 atlas atlas      8441 Feb 14 05:30 init_data.xml
2025-02-14 20:24:30 (8132): Guest Log: -rwxr-xr-x. 1 atlas atlas    503499 Feb 14 05:30 input.tar.gz
2025-02-14 20:24:30 (8132): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Feb 14 05:30 start_atlas.sh
2025-02-14 20:24:30 (8132): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb 14 05:30 EVNT.43078917._000313.pool.root.1 -> /data/./ATLAS.root_0
2025-02-14 20:24:30 (8132): Guest Log: -rw-r--r--. 1 atlas atlas      2546 Feb 14 05:30 pandaJob.out
2025-02-14 20:24:30 (8132): Guest Log: -rw-------. 1 atlas atlas       461 Feb 14 05:30 setup.sh.local
2025-02-14 20:24:30 (8132): Guest Log: -rw-------. 1 atlas atlas    986929 Feb 14 05:31 agis_schedconf.cvmfs.json
2025-02-14 20:24:30 (8132): Guest Log: drwx------. 4 atlas atlas      4096 Feb 14 05:31 pilot3
2025-02-14 20:24:30 (8132): Guest Log: -rw-------. 1 atlas atlas 323385104 Feb 14 19:23 HITS.43078919._018459.pool.root.1
2025-02-14 20:24:30 (8132): Guest Log: -rw-------. 1 atlas atlas      1025 Feb 14 19:23 memory_monitor_summary.json
2025-02-14 20:24:30 (8132): Guest Log: -rw-------. 1 atlas atlas   1593946 Feb 14 19:24 agis_ddmendpoints.agis.ALL.json
2025-02-14 20:24:30 (8132): Guest Log: -rw-------. 1 atlas atlas    716654 Feb 14 19:24 log.43078919._018459.job.log.tgz.1
2025-02-14 20:24:30 (8132): Guest Log: -rw-------. 1 atlas atlas        95 Feb 14 19:24 pilot_heartbeat.json
2025-02-14 20:24:30 (8132): Guest Log: -rw-------. 1 atlas atlas      7722 Feb 14 19:24 heartbeat.json
2025-02-14 20:24:30 (8132): Guest Log: -rw-------. 1 atlas atlas      4461 Feb 14 19:24 pilotlog.txt
2025-02-14 20:24:30 (8132): Guest Log: -rw-------. 1 atlas atlas   6553934 Feb 14 19:24 log.43078919._018459.job.log.1
2025-02-14 20:24:30 (8132): Guest Log: -rw-------. 1 atlas atlas       357 Feb 14 19:24 output.list
2025-02-14 20:24:30 (8132): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb 14 19:24 runtime_log
2025-02-14 20:24:30 (8132): Guest Log: -rw-------. 1 atlas atlas   7290880 Feb 14 19:24 result.tar.gz
2025-02-14 20:24:30 (8132): Guest Log: -rw-r--r--. 1 atlas atlas     11326 Feb 14 19:24 runtime_log.err
2025-02-14 20:24:30 (8132): Guest Log: -rw-------. 1 atlas atlas       665 Feb 14 19:24 9kILDmCu916nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmBjWKDmefMPHm.diag
2025-02-14 20:24:30 (8132): Guest Log: Looking for outputfile HITS.43078919._018459.pool.root.1
2025-02-14 20:24:30 (8132): Guest Log: HITS file was successfully produced
2025-02-14 20:24:30 (8132): Guest Log: -rw-------. 1 atlas atlas 323385104 Feb 14 19:23 /home/atlas/RunAtlas/HITS.43078919._018459.pool.root.1
2025-02-14 20:24:32 (8132): Guest Log: Successfully finished the ATLAS job!
2025-02-14 20:24:32 (8132): Guest Log: Copying the results back to the shared directory!
2025-02-14 20:24:32 (8132): Guest Log:  *** Contents of shared directory: ***
2025-02-14 20:24:32 (8132): Guest Log: total 657592
2025-02-14 20:24:32 (8132): Guest Log: -rwxrwxrwx. 1 root root 342157023 Feb 14 05:30 ATLAS.root_0
2025-02-14 20:24:32 (8132): Guest Log: -rwxrwxrwx. 1 root root 323385104 Feb 14  2025 HITS.pool.root.1
2025-02-14 20:24:32 (8132): Guest Log: -rwxrwxrwx. 1 root root      8441 Feb 14 05:30 init_data.xml
2025-02-14 20:24:32 (8132): Guest Log: -rwxrwxrwx. 1 root root    503499 Feb 11 20:20 input.tar.gz
2025-02-14 20:24:32 (8132): Guest Log: -rwxrwxrwx. 1 root root   7290880 Feb 14  2025 result.tar.gz
2025-02-14 20:24:32 (8132): Guest Log: -rwxrwxrwx. 1 root root     17569 Feb 11 20:20 start_atlas.sh
2025-02-14 20:24:32 (8132): Guest Log:  *** Success! Shutting down the machine. ***
2025-02-14 20:24:32 (8132): VM Completion File Detected.
2025-02-14 20:24:32 (8132): Powering off VM.
2025-02-14 20:24:33 (8132): Successfully stopped VM.
2025-02-14 20:24:33 (8132): Deregistering VM. (boinc_e3cf2899a7e3fbf8, slot#0)
2025-02-14 20:24:33 (8132): Removing network bandwidth throttle group from VM.
2025-02-14 20:24:33 (8132): Removing VM from VirtualBox.
20:24:38 (8132): called boinc_finish(0)

</stderr_txt>
]]>

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