Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-02-17 18:06:31 (2032): Detected: vboxwrapper 26206
2025-02-17 18:06:31 (2032): Detected: BOINC client v8.0.2
2025-02-17 18:06:32 (2032): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-02-17 18:06:33 (2032): Successfully copied 'init_data.xml' to the shared directory.
2025-02-17 18:06:33 (2032): Create VM. (boinc_980ab1700000cf7a, slot#3)
2025-02-17 18:06:34 (2032): Setting Memory Size for VM. (4400MB)
2025-02-17 18:06:35 (2032): Setting CPU Count for VM. (4)
2025-02-17 18:06:35 (2032): Setting Chipset Options for VM.
2025-02-17 18:06:35 (2032): Setting Graphics Controller Options for VM.
2025-02-17 18:06:36 (2032): Setting Boot Options for VM.
2025-02-17 18:06:36 (2032): Setting Network Configuration for NAT.
2025-02-17 18:06:36 (2032): Enabling VM Network Access.
2025-02-17 18:06:37 (2032): Disabling USB Support for VM.
2025-02-17 18:06:37 (2032): Disabling COM Port Support for VM.
2025-02-17 18:06:37 (2032): Disabling LPT Port Support for VM.
2025-02-17 18:06:38 (2032): Disabling Audio Support for VM.
2025-02-17 18:06:38 (2032): Disabling Clipboard Support for VM.
2025-02-17 18:06:38 (2032): Disabling Drag and Drop Support for VM.
2025-02-17 18:06:39 (2032): Adding storage controller(s) to VM.
2025-02-17 18:06:39 (2032): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-02-17 18:06:43 (2032): Adding VirtualBox Guest Additions to VM.
2025-02-17 18:06:43 (2032): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-02-17 18:06:43 (2032): forwarding host port 54663 to guest port 80
2025-02-17 18:06:44 (2032): Enabling remote desktop for VM.
2025-02-17 18:06:44 (2032): Required extension pack not installed, remote desktop not enabled.
2025-02-17 18:06:44 (2032): Enabling shared directory for VM.
2025-02-17 18:06:45 (2032): Starting VM using VBoxManage interface. (boinc_980ab1700000cf7a, slot#3)
2025-02-17 18:07:07 (2032): Successfully started VM. (PID = '8472')
2025-02-17 18:07:07 (2032): Reporting VM Process ID to BOINC.
2025-02-17 18:07:07 (2032): Guest Log: BIOS: VirtualBox 7.0.6
2025-02-17 18:07:07 (2032): Guest Log: CPUID EDX: 0x178bfbff
2025-02-17 18:07:07 (2032): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-02-17 18:07:07 (2032): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-02-17 18:07:07 (2032): VM state change detected. (old = 'poweredoff', new = 'running')
2025-02-17 18:07:07 (2032): Detected: Web Application Enabled (http://localhost:54663)
2025-02-17 18:07:07 (2032): Preference change detected
2025-02-17 18:07:07 (2032): Setting CPU throttle for VM. (100%)
2025-02-17 18:07:08 (2032): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-02-17 18:07:10 (2032): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-02-17 18:07:10 (2032): Guest Log: BIOS: Booting from Hard Disk...
2025-02-17 18:07:17 (2032): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-02-17 18:07:17 (2032): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-02-17 18:07:17 (2032): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-02-17 18:07:17 (2032): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-02-17 18:07:17 (2032): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-02-17 18:07:17 (2032): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-02-17 18:07:17 (2032): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-02-17 18:07:17 (2032): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-02-17 18:07:17 (2032): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-02-17 18:07:17 (2032): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-02-17 18:07:17 (2032): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-02-17 18:07:17 (2032): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-02-17 18:07:17 (2032): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-02-17 18:07:17 (2032): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-02-17 18:07:17 (2032): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-02-17 18:07:17 (2032): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-02-17 18:07:17 (2032): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-02-17 18:07:17 (2032): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-02-17 18:07:17 (2032): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-02-17 18:07:17 (2032): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-02-17 18:07:17 (2032): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-02-17 18:07:17 (2032): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-02-17 18:07:17 (2032): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-02-17 18:07:17 (2032): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-02-17 18:07:17 (2032): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-02-17 18:07:17 (2032): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-02-17 18:07:17 (2032): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-02-17 18:07:17 (2032): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-02-17 18:07:17 (2032): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-02-17 18:07:17 (2032): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-02-17 18:07:17 (2032): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-02-17 18:07:17 (2032): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-02-17 18:07:37 (2032): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-02-17 18:07:37 (2032): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-02-17 18:08:18 (2032): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-02-17 18:08:18 (2032): Guest Log: 00:00:00.000191 main     Log opened 2025-02-17T18:08:15.250441000Z
2025-02-17 18:08:18 (2032): Guest Log: 00:00:00.000418 main     OS Product: Linux
2025-02-17 18:08:18 (2032): Guest Log: 00:00:00.000469 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-02-17 18:08:18 (2032): Guest Log: 00:00:00.000510 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-02-17 18:08:18 (2032): Guest Log: 00:00:00.000548 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-02-17 18:08:18 (2032): Guest Log: 00:00:00.000549 main     Process ID: 1336
2025-02-17 18:08:18 (2032): Guest Log: 00:00:00.000550 main     Package type: LINUX_64BITS_GENERIC
2025-02-17 18:08:18 (2032): Guest Log: 00:00:00.001583 main     5.2.32 r132073 started. Verbose level = 0
2025-02-17 18:08:18 (2032): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-02-17 18:08:18 (2032): Guest Log: [INFO] Mounting shared directory
2025-02-17 18:08:18 (2032): Guest Log: [INFO] Checking for init_data.xml
2025-02-17 18:08:24 (2032): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-02-17 18:08:24 (2032): Guest Log: [INFO] Detected branch: prod
2025-02-17 18:08:24 (2032): Guest Log: This is the prod version of the ATLAS job wrapper
2025-02-17 18:08:24 (2032): Guest Log: Copying input files
2025-02-17 18:08:28 (2032): Guest Log: 00:00:10.009853 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 234 525 000ns (GuestNow=1 739 812 107 019 347 000 ns GuestLast=1 739 815 695 253 872 000 ns fSetTimeLastLoop=true )
2025-02-17 18:08:34 (2032): Guest Log: Copied input files into RunAtlas.
2025-02-17 18:08:34 (2032): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-02-17 18:08:34 (2032): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-02-17 18:08:34 (2032): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-02-17 18:08:34 (2032): Guest Log: Further information can be found at the LHC@home message board.
2025-02-17 18:08:47 (2032): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-02-17 18:08:48 (2032): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-02-17 18:08:48 (2032): Guest Log: 2.6.3.0 1612 0 32208 142756 4 1 3117296 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-02-17 18:08:52 (2032): Guest Log: copied the webapp to /var/www
2025-02-17 18:08:52 (2032): Guest Log: ATHENA_PROC_NUMBER=4
2025-02-17 18:08:52 (2032): Guest Log: ATHENA_CORE_NUMBER=4
2025-02-17 18:08:52 (2032): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-02-17 18:08:52 (2032): Guest Log:  *** Starting ATLAS job. (PandaID=6510368556 taskID=43078919) ***
2025-02-17 19:53:27 (2032): Status Report: Elapsed Time: '6000.856140'
2025-02-17 19:53:27 (2032): Status Report: CPU Time: '17348.687500'
2025-02-17 21:44:39 (2032): Status Report: Elapsed Time: '12002.038790'
2025-02-17 21:44:39 (2032): Status Report: CPU Time: '43888.921875'
2025-02-17 23:36:13 (2032): Status Report: Elapsed Time: '18002.992588'
2025-02-17 23:36:13 (2032): Status Report: CPU Time: '70514.781250'
2025-02-18 01:26:10 (2032): Status Report: Elapsed Time: '24003.517752'
2025-02-18 01:26:11 (2032): Status Report: CPU Time: '96593.140625'
2025-02-18 03:00:14 (2032): Guest Log:  *** Job finished ***
2025-02-18 03:00:14 (2032): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-02-18 03:00:14 (2032): Guest Log: 2025-02-18 01:59:59,655 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
2025-02-18 03:00:14 (2032): Guest Log: 2025-02-18 02:00:00,527 | INFO     | [job] queue monitor thread has finished
2025-02-18 03:00:14 (2032): Guest Log: 2025-02-18 02:00:03,671 | INFO     | [data] queue_monitor thread has finished
2025-02-18 03:00:14 (2032): Guest Log: 2025-02-18 02:00:05,098 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140500074522432)>', '<ExcThread(monitor, started 140499495143168)>']
2025-02-18 03:00:14 (2032): Guest Log: 2025-02-18 02:00:05,393 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-02-18 03:00:14 (2032): Guest Log: 2025-02-18 02:00:05,404 | INFO     | [monitor] control thread has ended
2025-02-18 03:00:14 (2032): Guest Log: 2025-02-18 02:00:10,123 | INFO     | all workflow threads have been joined
2025-02-18 03:00:14 (2032): Guest Log: 2025-02-18 02:00:10,123 | INFO     | end of generic workflow (traces error code: 0)
2025-02-18 03:00:14 (2032): Guest Log: 2025-02-18 02:00:10,124 | INFO     | traces error code: 0
2025-02-18 03:00:14 (2032): Guest Log: 2025-02-18 02:00:10,125 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-02-18 03:00:14 (2032): Guest Log: 2025-02-18 02:00:10,607 [wrapper] ==== pilot stdout END ====
2025-02-18 03:00:14 (2032): Guest Log: 2025-02-18 02:00:10,619 [wrapper] ==== wrapper stdout RESUME ====
2025-02-18 03:00:14 (2032): Guest Log: 2025-02-18 02:00:10,633 [wrapper] pilotpid: 5970
2025-02-18 03:00:14 (2032): Guest Log: 2025-02-18 02:00:10,651 [wrapper] Pilot exit status: 0
2025-02-18 03:00:14 (2032): Guest Log: 2025-02-18 02:00:10,896 [wrapper] pandaids: 6510368556
2025-02-18 03:00:14 (2032): Guest Log: 2025-02-18 02:00:11,108 [wrapper] cleanup supervisor_pilot 11494 5971
2025-02-18 03:00:14 (2032): Guest Log: 2025-02-18 02:00:11,126 [wrapper] Test setup, not cleaning
2025-02-18 03:00:14 (2032): Guest Log: 2025-02-18 02:00:11,156 [wrapper] apfmon messages muted
2025-02-18 03:00:14 (2032): Guest Log: 2025-02-18 02:00:11,186 [wrapper] ==== wrapper stdout END ====
2025-02-18 03:00:14 (2032): Guest Log: 2025-02-18 02:00:11,194 [wrapper] ==== wrapper stderr END ====
2025-02-18 03:00:14 (2032): Guest Log:  *** Error codes and diagnostics ***
2025-02-18 03:00:14 (2032): Guest Log:     "exeErrorCode": 0,
2025-02-18 03:00:14 (2032): Guest Log:     "exeErrorDiag": "",
2025-02-18 03:00:14 (2032): Guest Log:     "pilotErrorCode": 0,
2025-02-18 03:00:14 (2032): Guest Log:     "pilotErrorDiag": "",
2025-02-18 03:00:14 (2032): Guest Log:  *** Listing of results directory ***
2025-02-18 03:00:14 (2032): Guest Log: total 335544
2025-02-18 03:00:14 (2032): Guest Log: -rw-r--r--. 1 atlas atlas    491065 Feb 11 06:58 pilot3.tar.gz
2025-02-18 03:00:14 (2032): Guest Log: -rw-r--r--. 1 atlas atlas      5118 Feb 11 07:10 queuedata.json
2025-02-18 03:00:14 (2032): Guest Log: -rwx------. 1 atlas atlas     34924 Feb 11 07:11 runpilot2-wrapper.sh
2025-02-18 03:00:14 (2032): Guest Log: -rwxr-xr-x. 1 atlas atlas      9502 Feb 17 17:08 init_data.xml
2025-02-18 03:00:14 (2032): Guest Log: -rwxr-xr-x. 1 atlas atlas    503502 Feb 17 17:08 input.tar.gz
2025-02-18 03:00:14 (2032): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Feb 17 17:08 start_atlas.sh
2025-02-18 03:00:14 (2032): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb 17 17:08 EVNT.43078917._000170.pool.root.1 -> /data/./ATLAS.root_0
2025-02-18 03:00:14 (2032): Guest Log: -rw-r--r--. 1 atlas atlas      2546 Feb 17 17:08 pandaJob.out
2025-02-18 03:00:14 (2032): Guest Log: -rw-------. 1 atlas atlas       424 Feb 17 17:08 setup.sh.local
2025-02-18 03:00:14 (2032): Guest Log: -rw-------. 1 atlas atlas    985718 Feb 17 17:10 agis_schedconf.cvmfs.json
2025-02-18 03:00:14 (2032): Guest Log: drwx------. 4 atlas atlas      4096 Feb 17 17:10 pilot3
2025-02-18 03:00:14 (2032): Guest Log: -rw-------. 1 atlas atlas 332694314 Feb 18 01:57 HITS.43078919._015550.pool.root.1
2025-02-18 03:00:14 (2032): Guest Log: -rw-------. 1 atlas atlas        95 Feb 18 01:59 pilot_heartbeat.json
2025-02-18 03:00:14 (2032): Guest Log: -rw-------. 1 atlas atlas      1032 Feb 18 01:59 memory_monitor_summary.json
2025-02-18 03:00:14 (2032): Guest Log: -rw-------. 1 atlas atlas   1593946 Feb 18 01:59 agis_ddmendpoints.agis.ALL.json
2025-02-18 03:00:14 (2032): Guest Log: -rw-------. 1 atlas atlas    514804 Feb 18 01:59 log.43078919._015550.job.log.tgz.1
2025-02-18 03:00:14 (2032): Guest Log: -rw-------. 1 atlas atlas      7745 Feb 18 01:59 heartbeat.json
2025-02-18 03:00:14 (2032): Guest Log: -rw-------. 1 atlas atlas      4461 Feb 18 02:00 pilotlog.txt
2025-02-18 03:00:14 (2032): Guest Log: -rw-------. 1 atlas atlas   3060538 Feb 18 02:00 log.43078919._015550.job.log.1
2025-02-18 03:00:14 (2032): Guest Log: -rw-------. 1 atlas atlas       357 Feb 18 02:00 output.list
2025-02-18 03:00:14 (2032): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb 18 02:00 runtime_log
2025-02-18 03:00:14 (2032): Guest Log: -rw-------. 1 atlas atlas   3594240 Feb 18 02:00 result.tar.gz
2025-02-18 03:00:14 (2032): Guest Log: -rw-------. 1 atlas atlas       658 Feb 18 02:00 VKZLDm0bz16n9Rq4apOajLDm4fhM0noT9bVoFjIUDmvRPKDmYi6yRo.diag
2025-02-18 03:00:14 (2032): Guest Log: -rw-r--r--. 1 atlas atlas     10936 Feb 18 02:00 runtime_log.err
2025-02-18 03:00:14 (2032): Guest Log: Looking for outputfile HITS.43078919._015550.pool.root.1
2025-02-18 03:00:14 (2032): Guest Log: HITS file was successfully produced
2025-02-18 03:00:14 (2032): Guest Log: -rw-------. 1 atlas atlas 332694314 Feb 18 01:57 /home/atlas/RunAtlas/HITS.43078919._015550.pool.root.1
2025-02-18 03:00:22 (2032): Guest Log: Successfully finished the ATLAS job!
2025-02-18 03:00:22 (2032): Guest Log: Copying the results back to the shared directory!
2025-02-18 03:00:22 (2032): Guest Log:  *** Contents of shared directory: ***
2025-02-18 03:00:22 (2032): Guest Log: total 660460
2025-02-18 03:00:22 (2032): Guest Log: -rwxrwxrwx. 1 root root 339479391 Feb 17 17:06 ATLAS.root_0
2025-02-18 03:00:22 (2032): Guest Log: -rwxrwxrwx. 1 root root 332694314 Feb 18 02:00 HITS.pool.root.1
2025-02-18 03:00:22 (2032): Guest Log: -rwxrwxrwx. 1 root root      9502 Feb 17 17:06 init_data.xml
2025-02-18 03:00:22 (2032): Guest Log: -rwxrwxrwx. 1 root root    503502 Feb 11 10:49 input.tar.gz
2025-02-18 03:00:22 (2032): Guest Log: -rwxrwxrwx. 1 root root   3594240 Feb 18 02:00 result.tar.gz
2025-02-18 03:00:22 (2032): Guest Log: -rwxrwxrwx. 1 root root     17569 Feb 11 10:49 start_atlas.sh
2025-02-18 03:00:22 (2032): Guest Log:  *** Success! Shutting down the machine. ***
2025-02-18 03:00:22 (2032): VM Completion File Detected.
2025-02-18 03:00:22 (2032): Powering off VM.
2025-02-18 03:00:26 (2032): Successfully stopped VM.
2025-02-18 03:00:26 (2032): Deregistering VM. (boinc_980ab1700000cf7a, slot#3)
2025-02-18 03:00:26 (2032): Removing network bandwidth throttle group from VM.
2025-02-18 03:00:26 (2032): Removing VM from VirtualBox.
03:00:32 (2032): called boinc_finish(0)

</stderr_txt>
]]>

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