Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-02-18 03:00:49 (5432): Detected: vboxwrapper 26206
2025-02-18 03:00:49 (5432): Detected: BOINC client v8.0.2
2025-02-18 03:00:50 (5432): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-02-18 03:00:50 (5432): Successfully copied 'init_data.xml' to the shared directory.
2025-02-18 03:00:51 (5432): Create VM. (boinc_e26c02e12f90eab0, slot#3)
2025-02-18 03:00:52 (5432): Setting Memory Size for VM. (4400MB)
2025-02-18 03:00:52 (5432): Setting CPU Count for VM. (4)
2025-02-18 03:00:52 (5432): Setting Chipset Options for VM.
2025-02-18 03:00:53 (5432): Setting Graphics Controller Options for VM.
2025-02-18 03:00:53 (5432): Setting Boot Options for VM.
2025-02-18 03:00:53 (5432): Setting Network Configuration for NAT.
2025-02-18 03:00:53 (5432): Enabling VM Network Access.
2025-02-18 03:00:54 (5432): Disabling USB Support for VM.
2025-02-18 03:00:54 (5432): Disabling COM Port Support for VM.
2025-02-18 03:00:54 (5432): Disabling LPT Port Support for VM.
2025-02-18 03:00:54 (5432): Disabling Audio Support for VM.
2025-02-18 03:00:55 (5432): Disabling Clipboard Support for VM.
2025-02-18 03:00:55 (5432): Disabling Drag and Drop Support for VM.
2025-02-18 03:00:55 (5432): Adding storage controller(s) to VM.
2025-02-18 03:00:55 (5432): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-02-18 03:00:59 (5432): Adding VirtualBox Guest Additions to VM.
2025-02-18 03:00:59 (5432): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-02-18 03:00:59 (5432): forwarding host port 55520 to guest port 80
2025-02-18 03:01:00 (5432): Enabling remote desktop for VM.
2025-02-18 03:01:00 (5432): Required extension pack not installed, remote desktop not enabled.
2025-02-18 03:01:00 (5432): Enabling shared directory for VM.
2025-02-18 03:01:01 (5432): Starting VM using VBoxManage interface. (boinc_e26c02e12f90eab0, slot#3)
2025-02-18 03:01:22 (5432): Successfully started VM. (PID = '7632')
2025-02-18 03:01:22 (5432): Reporting VM Process ID to BOINC.
2025-02-18 03:01:22 (5432): Guest Log: BIOS: VirtualBox 7.0.6
2025-02-18 03:01:22 (5432): Guest Log: CPUID EDX: 0x178bfbff
2025-02-18 03:01:22 (5432): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-02-18 03:01:22 (5432): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-02-18 03:01:22 (5432): VM state change detected. (old = 'poweredoff', new = 'running')
2025-02-18 03:01:22 (5432): Detected: Web Application Enabled (http://localhost:55520)
2025-02-18 03:01:22 (5432): Preference change detected
2025-02-18 03:01:22 (5432): Setting CPU throttle for VM. (100%)
2025-02-18 03:01:22 (5432): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-02-18 03:01:24 (5432): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-02-18 03:01:24 (5432): Guest Log: BIOS: Booting from Hard Disk...
2025-02-18 03:01:31 (5432): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-02-18 03:01:31 (5432): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-02-18 03:01:31 (5432): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-02-18 03:01:31 (5432): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-02-18 03:01:31 (5432): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-02-18 03:01:31 (5432): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-02-18 03:01:31 (5432): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-02-18 03:01:31 (5432): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-02-18 03:01:31 (5432): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-02-18 03:01:31 (5432): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-02-18 03:01:31 (5432): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-02-18 03:01:31 (5432): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-02-18 03:01:31 (5432): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-02-18 03:01:31 (5432): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-02-18 03:01:31 (5432): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-02-18 03:01:31 (5432): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-02-18 03:01:31 (5432): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-02-18 03:01:31 (5432): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-02-18 03:01:31 (5432): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-02-18 03:01:31 (5432): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-02-18 03:01:31 (5432): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-02-18 03:01:31 (5432): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-02-18 03:01:31 (5432): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-02-18 03:01:31 (5432): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-02-18 03:01:31 (5432): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-02-18 03:01:31 (5432): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-02-18 03:01:31 (5432): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-02-18 03:01:31 (5432): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-02-18 03:01:31 (5432): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-02-18 03:01:31 (5432): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-02-18 03:01:31 (5432): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-02-18 03:01:31 (5432): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-02-18 03:01:51 (5432): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-02-18 03:01:51 (5432): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-02-18 03:02:31 (5432): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-02-18 03:02:31 (5432): Guest Log: 00:00:00.000242 main     Log opened 2025-02-18T03:02:28.621007000Z
2025-02-18 03:02:31 (5432): Guest Log: 00:00:00.000375 main     OS Product: Linux
2025-02-18 03:02:31 (5432): Guest Log: 00:00:00.000418 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-02-18 03:02:31 (5432): Guest Log: 00:00:00.000494 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-02-18 03:02:31 (5432): Guest Log: 00:00:00.000539 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-02-18 03:02:31 (5432): Guest Log: 00:00:00.000540 main     Process ID: 1313
2025-02-18 03:02:31 (5432): Guest Log: 00:00:00.000541 main     Package type: LINUX_64BITS_GENERIC
2025-02-18 03:02:31 (5432): Guest Log: 00:00:00.001476 main     5.2.32 r132073 started. Verbose level = 0
2025-02-18 03:02:31 (5432): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-02-18 03:02:31 (5432): Guest Log: [INFO] Mounting shared directory
2025-02-18 03:02:31 (5432): Guest Log: [INFO] Checking for init_data.xml
2025-02-18 03:02:41 (5432): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-02-18 03:02:41 (5432): Guest Log: [INFO] Detected branch: prod
2025-02-18 03:02:41 (5432): Guest Log: 00:00:10.025074 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 587 946 380 000ns (GuestNow=1 739 844 160 678 861 000 ns GuestLast=1 739 847 748 625 241 000 ns fSetTimeLastLoop=true )
2025-02-18 03:02:41 (5432): Guest Log: This is the prod version of the ATLAS job wrapper
2025-02-18 03:02:41 (5432): Guest Log: Copying input files
2025-02-18 03:02:50 (5432): Guest Log: Copied input files into RunAtlas.
2025-02-18 03:02:50 (5432): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-02-18 03:02:50 (5432): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-02-18 03:02:50 (5432): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-02-18 03:02:50 (5432): Guest Log: Further information can be found at the LHC@home message board.
2025-02-18 03:03:01 (5432): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-02-18 03:03:02 (5432): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-02-18 03:03:02 (5432): Guest Log: 2.6.3.0 1594 0 30164 142769 3 1 3117296 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-02-18 03:03:06 (5432): Guest Log: copied the webapp to /var/www
2025-02-18 03:03:06 (5432): Guest Log: ATHENA_PROC_NUMBER=4
2025-02-18 03:03:06 (5432): Guest Log: ATHENA_CORE_NUMBER=4
2025-02-18 03:03:07 (5432): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-02-18 03:03:07 (5432): Guest Log:  *** Starting ATLAS job. (PandaID=6510367958 taskID=43078919) ***
2025-02-18 04:47:01 (5432): Status Report: Elapsed Time: '6000.879667'
2025-02-18 04:47:01 (5432): Status Report: CPU Time: '15949.546875'
2025-02-18 06:37:12 (5432): Status Report: Elapsed Time: '12000.963949'
2025-02-18 06:37:12 (5432): Status Report: CPU Time: '42211.343750'
2025-02-18 08:26:18 (5432): Status Report: Elapsed Time: '18001.398527'
2025-02-18 08:26:18 (5432): Status Report: CPU Time: '68253.265625'
2025-02-18 10:15:00 (5432): Status Report: Elapsed Time: '24001.630474'
2025-02-18 10:15:00 (5432): Status Report: CPU Time: '94085.750000'
2025-02-18 11:28:40 (5432): Guest Log:  *** Job finished ***
2025-02-18 11:28:40 (5432): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-02-18 11:28:40 (5432): Guest Log: 2025-02-18 10:28:25,264 | INFO     | [data] queue_monitor thread has finished
2025-02-18 11:28:40 (5432): Guest Log: 2025-02-18 10:28:30,089 | INFO     | job.realtimelogging is not enabled
2025-02-18 11:28:40 (5432): Guest Log: 2025-02-18 10:28:31,104 | INFO     | [payload] run_realtimelog thread has finished
2025-02-18 11:28:40 (5432): Guest Log: 2025-02-18 10:28:31,743 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140237440169792)>', '<ExcThread(monitor, started 140237141415680)>']
2025-02-18 11:28:40 (5432): Guest Log: 2025-02-18 10:28:32,086 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-02-18 11:28:40 (5432): Guest Log: 2025-02-18 10:28:32,095 | INFO     | [monitor] control thread has ended
2025-02-18 11:28:40 (5432): Guest Log: 2025-02-18 10:28:36,755 | INFO     | all workflow threads have been joined
2025-02-18 11:28:40 (5432): Guest Log: 2025-02-18 10:28:36,758 | INFO     | end of generic workflow (traces error code: 0)
2025-02-18 11:28:40 (5432): Guest Log: 2025-02-18 10:28:36,761 | INFO     | traces error code: 0
2025-02-18 11:28:40 (5432): Guest Log: 2025-02-18 10:28:36,763 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-02-18 11:28:40 (5432): Guest Log: 2025-02-18 10:28:37,216 [wrapper] ==== pilot stdout END ====
2025-02-18 11:28:40 (5432): Guest Log: 2025-02-18 10:28:37,292 [wrapper] ==== wrapper stdout RESUME ====
2025-02-18 11:28:40 (5432): Guest Log: 2025-02-18 10:28:37,306 [wrapper] pilotpid: 5985
2025-02-18 11:28:40 (5432): Guest Log: 2025-02-18 10:28:37,320 [wrapper] Pilot exit status: 0
2025-02-18 11:28:40 (5432): Guest Log: 2025-02-18 10:28:37,570 [wrapper] pandaids: 6510367958
2025-02-18 11:28:40 (5432): Guest Log: 2025-02-18 10:28:37,675 [wrapper] cleanup supervisor_pilot  8351 5986
2025-02-18 11:28:40 (5432): Guest Log: 2025-02-18 10:28:37,695 [wrapper] Test setup, not cleaning
2025-02-18 11:28:40 (5432): Guest Log: 2025-02-18 10:28:37,798 [wrapper] apfmon messages muted
2025-02-18 11:28:40 (5432): Guest Log: 2025-02-18 10:28:37,838 [wrapper] ==== wrapper stdout END ====
2025-02-18 11:28:40 (5432): Guest Log: 2025-02-18 10:28:37,849 [wrapper] ==== wrapper stderr END ====
2025-02-18 11:28:40 (5432): Guest Log:  *** Error codes and diagnostics ***
2025-02-18 11:28:40 (5432): Guest Log:     "exeErrorCode": 0,
2025-02-18 11:28:40 (5432): Guest Log:     "exeErrorDiag": "",
2025-02-18 11:28:40 (5432): Guest Log:     "pilotErrorCode": 0,
2025-02-18 11:28:40 (5432): Guest Log:     "pilotErrorDiag": "",
2025-02-18 11:28:40 (5432): Guest Log:  *** Listing of results directory ***
2025-02-18 11:28:40 (5432): Guest Log: total 331140
2025-02-18 11:28:40 (5432): Guest Log: -rw-r--r--. 1 atlas atlas    491065 Feb 11 06:49 pilot3.tar.gz
2025-02-18 11:28:40 (5432): Guest Log: -rwx------. 1 atlas atlas     34924 Feb 11 06:50 runpilot2-wrapper.sh
2025-02-18 11:28:40 (5432): Guest Log: -rw-r--r--. 1 atlas atlas      5118 Feb 11 06:50 queuedata.json
2025-02-18 11:28:40 (5432): Guest Log: -rwxr-xr-x. 1 atlas atlas      9502 Feb 18 02:02 init_data.xml
2025-02-18 11:28:40 (5432): Guest Log: -rwxr-xr-x. 1 atlas atlas    503496 Feb 18 02:02 input.tar.gz
2025-02-18 11:28:40 (5432): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Feb 18 02:02 start_atlas.sh
2025-02-18 11:28:40 (5432): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb 18 02:02 EVNT.43078917._000149.pool.root.1 -> /data/./ATLAS.root_0
2025-02-18 11:28:40 (5432): Guest Log: -rw-r--r--. 1 atlas atlas      2545 Feb 18 02:03 pandaJob.out
2025-02-18 11:28:40 (5432): Guest Log: -rw-------. 1 atlas atlas       424 Feb 18 02:03 setup.sh.local
2025-02-18 11:28:40 (5432): Guest Log: -rw-------. 1 atlas atlas    986325 Feb 18 02:07 agis_schedconf.cvmfs.json
2025-02-18 11:28:40 (5432): Guest Log: drwx------. 4 atlas atlas      4096 Feb 18 02:07 pilot3
2025-02-18 11:28:40 (5432): Guest Log: -rw-------. 1 atlas atlas 327942245 Feb 18 10:25 HITS.43078919._015371.pool.root.1
2025-02-18 11:28:40 (5432): Guest Log: -rw-------. 1 atlas atlas        96 Feb 18 10:27 pilot_heartbeat.json
2025-02-18 11:28:40 (5432): Guest Log: -rw-------. 1 atlas atlas      1035 Feb 18 10:27 memory_monitor_summary.json
2025-02-18 11:28:40 (5432): Guest Log: -rw-------. 1 atlas atlas   1593946 Feb 18 10:27 agis_ddmendpoints.agis.ALL.json
2025-02-18 11:28:40 (5432): Guest Log: -rw-------. 1 atlas atlas    505784 Feb 18 10:27 log.43078919._015371.job.log.tgz.1
2025-02-18 11:28:40 (5432): Guest Log: -rw-------. 1 atlas atlas      7750 Feb 18 10:28 heartbeat.json
2025-02-18 11:28:40 (5432): Guest Log: -rw-------. 1 atlas atlas      4470 Feb 18 10:28 pilotlog.txt
2025-02-18 11:28:40 (5432): Guest Log: -rw-------. 1 atlas atlas   3189410 Feb 18 10:28 log.43078919._015371.job.log.1
2025-02-18 11:28:40 (5432): Guest Log: -rw-------. 1 atlas atlas       357 Feb 18 10:28 output.list
2025-02-18 11:28:40 (5432): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb 18 10:28 runtime_log
2025-02-18 11:28:40 (5432): Guest Log: -rw-------. 1 atlas atlas   3717120 Feb 18 10:28 result.tar.gz
2025-02-18 11:28:40 (5432): Guest Log: -rw-r--r--. 1 atlas atlas     10936 Feb 18 10:28 runtime_log.err
2025-02-18 11:28:40 (5432): Guest Log: -rw-------. 1 atlas atlas       658 Feb 18 10:28 NBAMDmyGz16nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm0wVKDmFkWuCn.diag
2025-02-18 11:28:40 (5432): Guest Log: Looking for outputfile HITS.43078919._015371.pool.root.1
2025-02-18 11:28:40 (5432): Guest Log: HITS file was successfully produced
2025-02-18 11:28:40 (5432): Guest Log: -rw-------. 1 atlas atlas 327942245 Feb 18 10:25 /home/atlas/RunAtlas/HITS.43078919._015371.pool.root.1
2025-02-18 11:28:49 (5432): Guest Log: Successfully finished the ATLAS job!
2025-02-18 11:28:49 (5432): Guest Log: Copying the results back to the shared directory!
2025-02-18 11:28:49 (5432): Guest Log:  *** Contents of shared directory: ***
2025-02-18 11:28:49 (5432): Guest Log: total 658684
2025-02-18 11:28:49 (5432): Guest Log: -rwxrwxrwx. 1 root root 342287002 Feb 18 02:00 ATLAS.root_0
2025-02-18 11:28:49 (5432): Guest Log: -rwxrwxrwx. 1 root root 327942245 Feb 18 10:28 HITS.pool.root.1
2025-02-18 11:28:49 (5432): Guest Log: -rwxrwxrwx. 1 root root      9502 Feb 18 02:00 init_data.xml
2025-02-18 11:28:49 (5432): Guest Log: -rwxrwxrwx. 1 root root    503496 Feb 11 10:48 input.tar.gz
2025-02-18 11:28:49 (5432): Guest Log: -rwxrwxrwx. 1 root root   3717120 Feb 18 10:28 result.tar.gz
2025-02-18 11:28:49 (5432): Guest Log: -rwxrwxrwx. 1 root root     17569 Feb 11 10:48 start_atlas.sh
2025-02-18 11:28:49 (5432): Guest Log:  *** Success! Shutting down the machine. ***
2025-02-18 11:28:50 (5432): VM Completion File Detected.
2025-02-18 11:28:50 (5432): Powering off VM.
2025-02-18 11:28:53 (5432): Successfully stopped VM.
2025-02-18 11:28:53 (5432): Deregistering VM. (boinc_e26c02e12f90eab0, slot#3)
2025-02-18 11:28:53 (5432): Removing network bandwidth throttle group from VM.
2025-02-18 11:28:54 (5432): Removing VM from VirtualBox.
11:29:00 (5432): called boinc_finish(0)

</stderr_txt>
]]>

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