Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-02-12 11:34:45 (9576): Detected: vboxwrapper 26206
2025-02-12 11:34:45 (9576): Detected: BOINC client v8.0.2
2025-02-12 11:34:46 (9576): Detected: VirtualBox VboxManage Interface (Version: 6.1.36)
2025-02-12 11:34:46 (9576): Successfully copied 'init_data.xml' to the shared directory.
2025-02-12 11:34:47 (9576): Create VM. (boinc_a4ed22ec1ce23462, slot#0)
2025-02-12 11:34:47 (9576): Setting Memory Size for VM. (4200MB)
2025-02-12 11:34:48 (9576): Setting CPU Count for VM. (2)
2025-02-12 11:34:48 (9576): Setting Chipset Options for VM.
2025-02-12 11:34:48 (9576): Setting Graphics Controller Options for VM.
2025-02-12 11:34:48 (9576): Setting Boot Options for VM.
2025-02-12 11:34:49 (9576): Setting Network Configuration for NAT.
2025-02-12 11:34:49 (9576): Enabling VM Network Access.
2025-02-12 11:34:49 (9576): Disabling USB Support for VM.
2025-02-12 11:34:50 (9576): Disabling COM Port Support for VM.
2025-02-12 11:34:50 (9576): Disabling LPT Port Support for VM.
2025-02-12 11:34:50 (9576): Disabling Audio Support for VM.
2025-02-12 11:34:50 (9576): Disabling Clipboard Support for VM.
2025-02-12 11:34:51 (9576): Disabling Drag and Drop Support for VM.
2025-02-12 11:34:51 (9576): Adding storage controller(s) to VM.
2025-02-12 11:34:51 (9576): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-02-12 11:34:52 (9576): Adding VirtualBox Guest Additions to VM.
2025-02-12 11:34:52 (9576): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-02-12 11:34:52 (9576): forwarding host port 55068 to guest port 80
2025-02-12 11:34:53 (9576): Enabling remote desktop for VM.
2025-02-12 11:34:53 (9576): Enabling shared directory for VM.
2025-02-12 11:34:54 (9576): Starting VM using VBoxManage interface. (boinc_a4ed22ec1ce23462, slot#0)
2025-02-12 11:35:00 (9576): Successfully started VM. (PID = '2836')
2025-02-12 11:35:00 (9576): Reporting VM Process ID to BOINC.
2025-02-12 11:35:00 (9576): Guest Log: BIOS: VirtualBox 6.1.36
2025-02-12 11:35:00 (9576): Guest Log: CPUID EDX: 0x178bfbff
2025-02-12 11:35:00 (9576): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-02-12 11:35:00 (9576): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-02-12 11:35:00 (9576): VM state change detected. (old = 'poweredoff', new = 'running')
2025-02-12 11:35:00 (9576): Detected: Web Application Enabled (http://localhost:55068)
2025-02-12 11:35:00 (9576): Detected: Remote Desktop Enabled (localhost:55069)
2025-02-12 11:35:00 (9576): Preference change detected
2025-02-12 11:35:00 (9576): Setting CPU throttle for VM. (100%)
2025-02-12 11:35:00 (9576): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 600 seconds) or (Vbox_job.xml: 900 seconds))
2025-02-12 11:35:02 (9576): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-02-12 11:35:02 (9576): Guest Log: BIOS: Booting from Hard Disk...
2025-02-12 11:35:05 (9576): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-02-12 11:35:05 (9576): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-02-12 11:35:05 (9576): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-02-12 11:35:05 (9576): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-02-12 11:35:05 (9576): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-02-12 11:35:05 (9576): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-02-12 11:35:05 (9576): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-02-12 11:35:05 (9576): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-02-12 11:35:05 (9576): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-02-12 11:35:05 (9576): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-02-12 11:35:05 (9576): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-02-12 11:35:05 (9576): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-02-12 11:35:05 (9576): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-02-12 11:35:05 (9576): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-02-12 11:35:05 (9576): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-02-12 11:35:05 (9576): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-02-12 11:35:05 (9576): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-02-12 11:35:05 (9576): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-02-12 11:35:05 (9576): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-02-12 11:35:05 (9576): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-02-12 11:35:05 (9576): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-02-12 11:35:05 (9576): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-02-12 11:35:05 (9576): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-02-12 11:35:05 (9576): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-02-12 11:35:05 (9576): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-02-12 11:35:05 (9576): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-02-12 11:35:05 (9576): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-02-12 11:35:05 (9576): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-02-12 11:35:05 (9576): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-02-12 11:35:05 (9576): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-02-12 11:35:05 (9576): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-02-12 11:35:05 (9576): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-02-12 11:35:11 (9576): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-02-12 11:35:11 (9576): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-02-12 11:35:18 (9576): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-02-12 11:35:18 (9576): Guest Log: 00:00:00.000201 main     Log opened 2025-02-12T11:35:16.187597000Z
2025-02-12 11:35:18 (9576): Guest Log: 00:00:00.000400 main     OS Product: Linux
2025-02-12 11:35:18 (9576): Guest Log: 00:00:00.000452 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-02-12 11:35:18 (9576): Guest Log: 00:00:00.000497 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-02-12 11:35:18 (9576): Guest Log: 00:00:00.000541 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-02-12 11:35:18 (9576): Guest Log: 00:00:00.000543 main     Process ID: 1264
2025-02-12 11:35:18 (9576): Guest Log: 00:00:00.000543 main     Package type: LINUX_64BITS_GENERIC
2025-02-12 11:35:18 (9576): Guest Log: 00:00:00.002039 main     5.2.32 r132073 started. Verbose level = 0
2025-02-12 11:35:18 (9576): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-02-12 11:35:18 (9576): Guest Log: [INFO] Mounting shared directory
2025-02-12 11:35:18 (9576): Guest Log: [INFO] Checking for init_data.xml
2025-02-12 11:35:21 (9576): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-02-12 11:35:21 (9576): Guest Log: [INFO] Detected branch: prod
2025-02-12 11:35:21 (9576): Guest Log: This is the prod version of the ATLAS job wrapper
2025-02-12 11:35:21 (9576): Guest Log: Copying input files
2025-02-12 11:35:23 (9576): Guest Log: Copied input files into RunAtlas.
2025-02-12 11:35:23 (9576): Guest Log: Detected user-configured HTTP proxy at http://192.168.35.184:3128 - will set in /etc/cvmfs/default.local
2025-02-12 11:35:28 (9576): Guest Log: 00:00:10.005860 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 726 947 000ns (GuestNow=1 739 356 527 465 628 000 ns GuestLast=1 739 360 116 192 575 000 ns fSetTimeLastLoop=true )
2025-02-12 11:35:33 (9576): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-02-12 11:35:33 (9576): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-02-12 11:35:33 (9576): Guest Log: 2.6.3.0 1536 0 31548 142557 3 1 3117296 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.35.184:3128 1
2025-02-12 11:35:34 (9576): Guest Log: copied the webapp to /var/www
2025-02-12 11:35:34 (9576): Guest Log: ATHENA_PROC_NUMBER=2
2025-02-12 11:35:34 (9576): Guest Log: ATHENA_CORE_NUMBER=2
2025-02-12 11:35:34 (9576): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-02-12 11:35:34 (9576): Guest Log:  *** Starting ATLAS job. (PandaID=6510349851 taskID=43205075) ***
2025-02-12 13:15:11 (9576): Status Report: Elapsed Time: '6000.917385'
2025-02-12 13:15:11 (9576): Status Report: CPU Time: '10850.852356'
2025-02-12 14:55:17 (9576): Status Report: Elapsed Time: '12000.917385'
2025-02-12 14:55:17 (9576): Status Report: CPU Time: '22848.936067'
2025-02-12 16:35:30 (9576): Status Report: Elapsed Time: '18000.917385'
2025-02-12 16:35:30 (9576): Status Report: CPU Time: '34758.068007'
2025-02-12 18:16:29 (9576): Status Report: Elapsed Time: '24000.917385'
2025-02-12 18:16:29 (9576): Status Report: CPU Time: '46672.925183'
2025-02-12 19:57:00 (9576): Status Report: Elapsed Time: '30000.917385'
2025-02-12 19:57:00 (9576): Status Report: CPU Time: '58475.945243'
2025-02-12 21:37:15 (9576): Status Report: Elapsed Time: '36000.917385'
2025-02-12 21:37:15 (9576): Status Report: CPU Time: '70381.691962'
2025-02-12 23:17:26 (9576): Status Report: Elapsed Time: '42000.917385'
2025-02-12 23:17:26 (9576): Status Report: CPU Time: '82247.627225'
2025-02-13 00:57:30 (9576): Status Report: Elapsed Time: '48000.917385'
2025-02-13 00:57:30 (9576): Status Report: CPU Time: '94235.711271'
2025-02-13 02:02:42 (9576): Guest Log:  *** Job finished ***
2025-02-13 02:02:42 (9576): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-02-13 02:02:42 (9576): Guest Log: 2025-02-13 01:02:27,333 | INFO     | [data] queue_monitor thread has finished
2025-02-13 02:02:42 (9576): Guest Log: 2025-02-13 01:02:34,111 | INFO     | job.realtimelogging is not enabled
2025-02-13 02:02:42 (9576): Guest Log: 2025-02-13 01:02:35,113 | INFO     | [payload] run_realtimelog thread has finished
2025-02-13 02:02:42 (9576): Guest Log: 2025-02-13 01:02:36,486 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139758317455168)>', '<ExcThread(monitor, started 139757858301696)>']
2025-02-13 02:02:42 (9576): Guest Log: 2025-02-13 01:02:36,855 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-02-13 02:02:42 (9576): Guest Log: 2025-02-13 01:02:36,856 | INFO     | [monitor] control thread has ended
2025-02-13 02:02:42 (9576): Guest Log: 2025-02-13 01:02:41,491 | INFO     | all workflow threads have been joined
2025-02-13 02:02:42 (9576): Guest Log: 2025-02-13 01:02:41,492 | INFO     | end of generic workflow (traces error code: 0)
2025-02-13 02:02:42 (9576): Guest Log: 2025-02-13 01:02:41,492 | INFO     | traces error code: 0
2025-02-13 02:02:42 (9576): Guest Log: 2025-02-13 01:02:41,492 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-02-13 02:02:42 (9576): Guest Log: 2025-02-13 01:02:41,608 [wrapper] ==== pilot stdout END ====
2025-02-13 02:02:42 (9576): Guest Log: 2025-02-13 01:02:41,614 [wrapper] ==== wrapper stdout RESUME ====
2025-02-13 02:02:42 (9576): Guest Log: 2025-02-13 01:02:41,619 [wrapper] pilotpid: 5845
2025-02-13 02:02:42 (9576): Guest Log: 2025-02-13 01:02:41,623 [wrapper] Pilot exit status: 0
2025-02-13 02:02:42 (9576): Guest Log: 2025-02-13 01:02:41,663 [wrapper] pandaids: 6510349851
2025-02-13 02:02:42 (9576): Guest Log: 2025-02-13 01:02:41,692 [wrapper] cleanup supervisor_pilot 16642 5846
2025-02-13 02:02:42 (9576): Guest Log: 2025-02-13 01:02:41,698 [wrapper] Test setup, not cleaning
2025-02-13 02:02:42 (9576): Guest Log: 2025-02-13 01:02:41,708 [wrapper] apfmon messages muted
2025-02-13 02:02:42 (9576): Guest Log: 2025-02-13 01:02:41,713 [wrapper] ==== wrapper stdout END ====
2025-02-13 02:02:42 (9576): Guest Log: 2025-02-13 01:02:41,718 [wrapper] ==== wrapper stderr END ====
2025-02-13 02:02:42 (9576): Guest Log:  *** Error codes and diagnostics ***
2025-02-13 02:02:42 (9576): Guest Log:     "exeErrorCode": 0,
2025-02-13 02:02:42 (9576): Guest Log:     "exeErrorDiag": "",
2025-02-13 02:02:42 (9576): Guest Log:     "pilotErrorCode": 0,
2025-02-13 02:02:42 (9576): Guest Log:     "pilotErrorDiag": "",
2025-02-13 02:02:42 (9576): Guest Log:  *** Listing of results directory ***
2025-02-13 02:02:42 (9576): Guest Log: total 339668
2025-02-13 02:02:42 (9576): Guest Log: -rw-r--r--. 1 atlas atlas    491065 Feb 10 17:07 pilot3.tar.gz
2025-02-13 02:02:42 (9576): Guest Log: -rwx------. 1 atlas atlas     34924 Feb 10 17:21 runpilot2-wrapper.sh
2025-02-13 02:02:42 (9576): Guest Log: -rw-r--r--. 1 atlas atlas      5118 Feb 10 17:21 queuedata.json
2025-02-13 02:02:42 (9576): Guest Log: -rwxr-xr-x. 1 atlas atlas      8441 Feb 12 10:35 init_data.xml
2025-02-13 02:02:42 (9576): Guest Log: -rwxr-xr-x. 1 atlas atlas    503495 Feb 12 10:35 input.tar.gz
2025-02-13 02:02:42 (9576): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Feb 12 10:35 start_atlas.sh
2025-02-13 02:02:42 (9576): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb 12 10:35 EVNT.43092757._000365.pool.root.1 -> /data/./ATLAS.root_0
2025-02-13 02:02:42 (9576): Guest Log: -rw-r--r--. 1 atlas atlas      2554 Feb 12 10:35 pandaJob.out
2025-02-13 02:02:42 (9576): Guest Log: -rw-------. 1 atlas atlas       461 Feb 12 10:35 setup.sh.local
2025-02-13 02:02:42 (9576): Guest Log: -rw-------. 1 atlas atlas    986842 Feb 12 10:36 agis_schedconf.cvmfs.json
2025-02-13 02:02:42 (9576): Guest Log: drwx------. 4 atlas atlas      4096 Feb 12 10:36 pilot3
2025-02-13 02:02:42 (9576): Guest Log: -rw-------. 1 atlas atlas 329514282 Feb 13 01:01 HITS.43205075._014473.pool.root.1
2025-02-13 02:02:42 (9576): Guest Log: -rw-------. 1 atlas atlas      1025 Feb 13 01:01 memory_monitor_summary.json
2025-02-13 02:02:42 (9576): Guest Log: -rw-------. 1 atlas atlas   1591814 Feb 13 01:02 agis_ddmendpoints.agis.ALL.json
2025-02-13 02:02:42 (9576): Guest Log: -rw-------. 1 atlas atlas    757537 Feb 13 01:02 log.43205075._014473.job.log.tgz.1
2025-02-13 02:02:42 (9576): Guest Log: -rw-------. 1 atlas atlas        95 Feb 13 01:02 pilot_heartbeat.json
2025-02-13 02:02:42 (9576): Guest Log: -rw-------. 1 atlas atlas      7734 Feb 13 01:02 heartbeat.json
2025-02-13 02:02:42 (9576): Guest Log: -rw-------. 1 atlas atlas      4533 Feb 13 01:02 pilotlog.txt
2025-02-13 02:02:42 (9576): Guest Log: -rw-------. 1 atlas atlas   6521408 Feb 13 01:02 log.43205075._014473.job.log.1
2025-02-13 02:02:42 (9576): Guest Log: -rw-------. 1 atlas atlas       357 Feb 13 01:02 output.list
2025-02-13 02:02:42 (9576): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb 13 01:02 runtime_log
2025-02-13 02:02:42 (9576): Guest Log: -rw-------. 1 atlas atlas   7301120 Feb 13 01:02 result.tar.gz
2025-02-13 02:02:42 (9576): Guest Log: -rw-------. 1 atlas atlas       666 Feb 13 01:02 rWcNDmBem16nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmFgUKDm7pACzn.diag
2025-02-13 02:02:42 (9576): Guest Log: -rw-r--r--. 1 atlas atlas     11326 Feb 13 01:02 runtime_log.err
2025-02-13 02:02:42 (9576): Guest Log: Looking for outputfile HITS.43205075._014473.pool.root.1
2025-02-13 02:02:42 (9576): Guest Log: HITS file was successfully produced
2025-02-13 02:02:42 (9576): Guest Log: -rw-------. 1 atlas atlas 329514282 Feb 13 01:01 /home/atlas/RunAtlas/HITS.43205075._014473.pool.root.1
2025-02-13 02:02:44 (9576): Guest Log: Successfully finished the ATLAS job!
2025-02-13 02:02:44 (9576): Guest Log: Copying the results back to the shared directory!
2025-02-13 02:02:44 (9576): Guest Log:  *** Contents of shared directory: ***
2025-02-13 02:02:44 (9576): Guest Log: total 667464
2025-02-13 02:02:44 (9576): Guest Log: -rwxrwxrwx. 1 root root 346124354 Feb 12 10:34 ATLAS.root_0
2025-02-13 02:02:44 (9576): Guest Log: -rwxrwxrwx. 1 root root 329514282 Feb 13 01:02 HITS.pool.root.1
2025-02-13 02:02:44 (9576): Guest Log: -rwxrwxrwx. 1 root root      8441 Feb 12 10:34 init_data.xml
2025-02-13 02:02:44 (9576): Guest Log: -rwxrwxrwx. 1 root root    503495 Feb 10 20:02 input.tar.gz
2025-02-13 02:02:44 (9576): Guest Log: -rwxrwxrwx. 1 root root   7301120 Feb 13 01:02 result.tar.gz
2025-02-13 02:02:44 (9576): Guest Log: -rwxrwxrwx. 1 root root     17569 Feb 10 20:02 start_atlas.sh
2025-02-13 02:02:44 (9576): Guest Log:  *** Success! Shutting down the machine. ***
2025-02-13 02:02:44 (9576): VM Completion File Detected.
2025-02-13 02:02:44 (9576): Powering off VM.
2025-02-13 02:02:45 (9576): Successfully stopped VM.
2025-02-13 02:02:45 (9576): Deregistering VM. (boinc_a4ed22ec1ce23462, slot#0)
2025-02-13 02:02:45 (9576): Removing network bandwidth throttle group from VM.
2025-02-13 02:02:45 (9576): Removing VM from VirtualBox.
02:02:50 (9576): called boinc_finish(0)

</stderr_txt>
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