Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-02-10 19:47:21 (4372): Detected: vboxwrapper 26206
2025-02-10 19:47:21 (4372): Detected: BOINC client v8.0.2
2025-02-10 19:47:23 (4372): Detected: VirtualBox VboxManage Interface (Version: 7.1.6)
2025-02-10 19:47:23 (4372): Successfully copied 'init_data.xml' to the shared directory.
2025-02-10 19:47:24 (4372): Create VM. (boinc_24895cbd0978d087, slot#0)
2025-02-10 19:47:24 (4372): Setting Memory Size for VM. (4800MB)
2025-02-10 19:47:25 (4372): Setting CPU Count for VM. (8)
2025-02-10 19:47:25 (4372): Setting Chipset Options for VM.
2025-02-10 19:47:25 (4372): Setting Graphics Controller Options for VM.
2025-02-10 19:47:25 (4372): Setting Boot Options for VM.
2025-02-10 19:47:26 (4372): Setting Network Configuration for NAT.
2025-02-10 19:47:26 (4372): Enabling VM Network Access.
2025-02-10 19:47:26 (4372): Disabling USB Support for VM.
2025-02-10 19:47:26 (4372): Disabling COM Port Support for VM.
2025-02-10 19:47:27 (4372): Disabling LPT Port Support for VM.
2025-02-10 19:47:27 (4372): Disabling Audio Support for VM.
2025-02-10 19:47:27 (4372): Disabling Clipboard Support for VM.
2025-02-10 19:47:27 (4372): Disabling Drag and Drop Support for VM.
2025-02-10 19:47:28 (4372): Adding storage controller(s) to VM.
2025-02-10 19:47:28 (4372): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-02-10 19:47:31 (4372): Adding VirtualBox Guest Additions to VM.
2025-02-10 19:47:31 (4372): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-02-10 19:47:31 (4372): forwarding host port 54054 to guest port 80
2025-02-10 19:47:32 (4372): Enabling remote desktop for VM.
2025-02-10 19:47:32 (4372): Required extension pack not installed, remote desktop not enabled.
2025-02-10 19:47:32 (4372): Enabling shared directory for VM.
2025-02-10 19:47:32 (4372): Starting VM using VBoxManage interface. (boinc_24895cbd0978d087, slot#0)
2025-02-10 19:47:38 (4372): Successfully started VM. (PID = '24432')
2025-02-10 19:47:38 (4372): Reporting VM Process ID to BOINC.
2025-02-10 19:47:38 (4372): Guest Log: BIOS: VirtualBox 7.1.6
2025-02-10 19:47:38 (4372): Guest Log: CPUID EDX: 0x178bfbff
2025-02-10 19:47:38 (4372): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-02-10 19:47:38 (4372): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-02-10 19:47:38 (4372): VM state change detected. (old = 'poweredoff', new = 'running')
2025-02-10 19:47:38 (4372): Detected: Web Application Enabled (http://localhost:54054)
2025-02-10 19:47:38 (4372): Preference change detected
2025-02-10 19:47:38 (4372): Setting CPU throttle for VM. (100%)
2025-02-10 19:47:39 (4372): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-02-10 19:47:40 (4372): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-02-10 19:47:40 (4372): Guest Log: BIOS: Booting from Hard Disk...
2025-02-10 19:47:44 (4372): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-02-10 19:47:44 (4372): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-02-10 19:47:44 (4372): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-02-10 19:47:44 (4372): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-02-10 19:47:44 (4372): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-02-10 19:47:44 (4372): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-02-10 19:47:44 (4372): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-02-10 19:47:44 (4372): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-02-10 19:47:44 (4372): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-02-10 19:47:44 (4372): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-02-10 19:47:44 (4372): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-02-10 19:47:44 (4372): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-02-10 19:47:44 (4372): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-02-10 19:47:44 (4372): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-02-10 19:47:44 (4372): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-02-10 19:47:44 (4372): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-02-10 19:47:44 (4372): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-02-10 19:47:44 (4372): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-02-10 19:47:44 (4372): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-02-10 19:47:44 (4372): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-02-10 19:47:44 (4372): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-02-10 19:47:44 (4372): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-02-10 19:47:44 (4372): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-02-10 19:47:44 (4372): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-02-10 19:47:44 (4372): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-02-10 19:47:44 (4372): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-02-10 19:47:44 (4372): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-02-10 19:47:44 (4372): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-02-10 19:47:44 (4372): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-02-10 19:47:44 (4372): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-02-10 19:47:44 (4372): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-02-10 19:47:44 (4372): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-02-10 19:47:50 (4372): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-02-10 19:47:50 (4372): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-02-10 19:47:58 (4372): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-02-10 19:47:58 (4372): Guest Log: 00:00:00.000158 main     Log opened 2025-02-10T19:47:55.564297000Z
2025-02-10 19:47:58 (4372): Guest Log: 00:00:00.000246 main     OS Product: Linux
2025-02-10 19:47:58 (4372): Guest Log: 00:00:00.000329 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-02-10 19:47:58 (4372): Guest Log: 00:00:00.000356 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-02-10 19:47:58 (4372): Guest Log: 00:00:00.000383 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-02-10 19:47:58 (4372): Guest Log: 00:00:00.000384 main     Process ID: 1378
2025-02-10 19:47:58 (4372): Guest Log: 00:00:00.000384 main     Package type: LINUX_64BITS_GENERIC
2025-02-10 19:47:58 (4372): Guest Log: 00:00:00.001542 main     5.2.32 r132073 started. Verbose level = 0
2025-02-10 19:47:58 (4372): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-02-10 19:47:58 (4372): Guest Log: [INFO] Mounting shared directory
2025-02-10 19:47:58 (4372): Guest Log: [INFO] Checking for init_data.xml
2025-02-10 19:48:04 (4372): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-02-10 19:48:04 (4372): Guest Log: [INFO] Detected branch: prod
2025-02-10 19:48:04 (4372): Guest Log: This is the prod version of the ATLAS job wrapper
2025-02-10 19:48:04 (4372): Guest Log: Copying input files
2025-02-10 19:48:05 (4372): Guest Log: Copied input files into RunAtlas.
2025-02-10 19:48:05 (4372): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-02-10 19:48:05 (4372): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-02-10 19:48:05 (4372): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-02-10 19:48:05 (4372): Guest Log: Further information can be found at the LHC@home message board.
2025-02-10 19:48:07 (4372): Guest Log: 00:00:10.005616 timesync vgsvcTimeSyncWorker: Radical guest time change: 28 812 010 114 000ns (GuestNow=1 739 245 687 577 410 000 ns GuestLast=1 739 216 875 567 296 000 ns fSetTimeLastLoop=true )
2025-02-10 19:48:27 (4372): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-02-10 19:48:39 (4372): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-02-10 19:48:39 (4372): Guest Log: 2.6.3.0 1655 0 32036 142507 3 1 3117296 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-02-10 19:48:41 (4372): Guest Log: copied the webapp to /var/www
2025-02-10 19:48:41 (4372): Guest Log: ATHENA_PROC_NUMBER=8
2025-02-10 19:48:41 (4372): Guest Log: ATHENA_CORE_NUMBER=8
2025-02-10 19:48:41 (4372): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-02-10 19:48:41 (4372): Guest Log:  *** Starting ATLAS job. (PandaID=6510340658 taskID=43205094) ***
2025-02-10 21:35:59 (4372): Status Report: Elapsed Time: '6000.448679'
2025-02-10 21:35:59 (4372): Status Report: CPU Time: '38568.687500'
2025-02-10 23:25:38 (4372): Status Report: Elapsed Time: '12000.563341'
2025-02-10 23:25:38 (4372): Status Report: CPU Time: '87640.906250'
2025-02-11 00:41:09 (4372): Guest Log:  *** Job finished ***
2025-02-11 00:41:09 (4372): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-02-11 00:41:09 (4372): Guest Log: 2025-02-11 08:40:57,496 | INFO     | [payload] validate_post thread has finished
2025-02-11 00:41:09 (4372): Guest Log: 2025-02-11 08:40:58,240 | INFO     | [data] copytool_out thread has finished
2025-02-11 00:41:09 (4372): Guest Log: 2025-02-11 08:41:00,123 | INFO     | [data] queue_monitor thread has finished
2025-02-11 00:41:09 (4372): Guest Log: 2025-02-11 08:41:01,423 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139681789830976)>', '<ExcThread(monitor, started 139680901220096)>']
2025-02-11 00:41:09 (4372): Guest Log: 2025-02-11 08:41:02,146 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-02-11 00:41:09 (4372): Guest Log: 2025-02-11 08:41:02,147 | INFO     | [monitor] control thread has ended
2025-02-11 00:41:09 (4372): Guest Log: 2025-02-11 08:41:06,464 | INFO     | all workflow threads have been joined
2025-02-11 00:41:09 (4372): Guest Log: 2025-02-11 08:41:06,464 | INFO     | end of generic workflow (traces error code: 0)
2025-02-11 00:41:09 (4372): Guest Log: 2025-02-11 08:41:06,465 | INFO     | traces error code: 0
2025-02-11 00:41:09 (4372): Guest Log: 2025-02-11 08:41:06,465 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-02-11 00:41:09 (4372): Guest Log: 2025-02-11 08:41:06,557 [wrapper] ==== pilot stdout END ====
2025-02-11 00:41:09 (4372): Guest Log: 2025-02-11 08:41:06,568 [wrapper] ==== wrapper stdout RESUME ====
2025-02-11 00:41:09 (4372): Guest Log: 2025-02-11 08:41:06,575 [wrapper] pilotpid: 6051
2025-02-11 00:41:09 (4372): Guest Log: 2025-02-11 08:41:06,580 [wrapper] Pilot exit status: 0
2025-02-11 00:41:09 (4372): Guest Log: 2025-02-11 08:41:07,930 [wrapper] pandaids: 6510340658
2025-02-11 00:41:09 (4372): Guest Log: 2025-02-11 08:41:07,968 [wrapper] cleanup supervisor_pilot 21883 6052
2025-02-11 00:41:09 (4372): Guest Log: 2025-02-11 08:41:07,974 [wrapper] Test setup, not cleaning
2025-02-11 00:41:09 (4372): Guest Log: 2025-02-11 08:41:07,986 [wrapper] apfmon messages muted
2025-02-11 00:41:09 (4372): Guest Log: 2025-02-11 08:41:07,992 [wrapper] ==== wrapper stdout END ====
2025-02-11 00:41:09 (4372): Guest Log: 2025-02-11 08:41:07,997 [wrapper] ==== wrapper stderr END ====
2025-02-11 00:41:09 (4372): Guest Log:  *** Error codes and diagnostics ***
2025-02-11 00:41:09 (4372): Guest Log:     "exeErrorCode": 0,
2025-02-11 00:41:09 (4372): Guest Log:     "exeErrorDiag": "",
2025-02-11 00:41:09 (4372): Guest Log:     "pilotErrorCode": 0,
2025-02-11 00:41:09 (4372): Guest Log:     "pilotErrorDiag": "",
2025-02-11 00:41:09 (4372): Guest Log:  *** Listing of results directory ***
2025-02-11 00:41:09 (4372): Guest Log: total 320488
2025-02-11 00:41:09 (4372): Guest Log: -rw-r--r--. 1 atlas atlas    491065 Feb 10 11:47 pilot3.tar.gz
2025-02-11 00:41:09 (4372): Guest Log: -rw-r--r--. 1 atlas atlas      5118 Feb 10 11:51 queuedata.json
2025-02-11 00:41:09 (4372): Guest Log: -rwx------. 1 atlas atlas     34924 Feb 10 11:52 runpilot2-wrapper.sh
2025-02-11 00:41:09 (4372): Guest Log: -rwxr-xr-x. 1 atlas atlas      8735 Feb 11 03:48 init_data.xml
2025-02-11 00:41:09 (4372): Guest Log: -rwxr-xr-x. 1 atlas atlas    503499 Feb 11 03:48 input.tar.gz
2025-02-11 00:41:09 (4372): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Feb 11 03:48 start_atlas.sh
2025-02-11 00:41:09 (4372): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb 11 03:48 EVNT.43092757._001351.pool.root.1 -> /data/./ATLAS.root_0
2025-02-11 00:41:09 (4372): Guest Log: -rw-r--r--. 1 atlas atlas      2549 Feb 11 03:48 pandaJob.out
2025-02-11 00:41:09 (4372): Guest Log: -rw-------. 1 atlas atlas       424 Feb 11 03:48 setup.sh.local
2025-02-11 00:41:09 (4372): Guest Log: -rw-------. 1 atlas atlas    984413 Feb 11 03:50 agis_schedconf.cvmfs.json
2025-02-11 00:41:09 (4372): Guest Log: drwx------. 4 atlas atlas      4096 Feb 11 03:50 pilot3
2025-02-11 00:41:09 (4372): Guest Log: -rw-------. 1 atlas atlas 320543186 Feb 11 08:40 HITS.43205094._007720.pool.root.1
2025-02-11 00:41:09 (4372): Guest Log: -rw-------. 1 atlas atlas        95 Feb 11 08:40 pilot_heartbeat.json
2025-02-11 00:41:09 (4372): Guest Log: -rw-------. 1 atlas atlas      1034 Feb 11 08:40 memory_monitor_summary.json
2025-02-11 00:41:09 (4372): Guest Log: -rw-------. 1 atlas atlas   1591819 Feb 11 08:40 agis_ddmendpoints.agis.ALL.json
2025-02-11 00:41:09 (4372): Guest Log: -rw-------. 1 atlas atlas    430313 Feb 11 08:40 log.43205094._007720.job.log.tgz.1
2025-02-11 00:41:09 (4372): Guest Log: -rw-------. 1 atlas atlas      7716 Feb 11 08:40 heartbeat.json
2025-02-11 00:41:09 (4372): Guest Log: -rw-------. 1 atlas atlas      4398 Feb 11 08:41 pilotlog.txt
2025-02-11 00:41:09 (4372): Guest Log: -rw-------. 1 atlas atlas   1515355 Feb 11 08:41 log.43205094._007720.job.log.1
2025-02-11 00:41:09 (4372): Guest Log: -rw-------. 1 atlas atlas       357 Feb 11 08:41 output.list
2025-02-11 00:41:09 (4372): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb 11 08:41 runtime_log
2025-02-11 00:41:09 (4372): Guest Log: -rw-------. 1 atlas atlas   1966080 Feb 11 08:41 result.tar.gz
2025-02-11 00:41:09 (4372): Guest Log: -rw-r--r--. 1 atlas atlas     10926 Feb 11 08:41 runtime_log.err
2025-02-11 00:41:09 (4372): Guest Log: -rw-------. 1 atlas atlas       657 Feb 11 08:41 1VgNDmfVh16nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmT1TKDmhH9mXm.diag
2025-02-11 00:41:09 (4372): Guest Log: Looking for outputfile HITS.43205094._007720.pool.root.1
2025-02-11 00:41:09 (4372): Guest Log: HITS file was successfully produced
2025-02-11 00:41:09 (4372): Guest Log: -rw-------. 1 atlas atlas 320543186 Feb 11 08:40 /home/atlas/RunAtlas/HITS.43205094._007720.pool.root.1
2025-02-11 00:41:26 (4372): Guest Log: Successfully finished the ATLAS job!
2025-02-11 00:41:26 (4372): Guest Log: Copying the results back to the shared directory!
2025-02-11 00:41:26 (4372): Guest Log:  *** Contents of shared directory: ***
2025-02-11 00:41:26 (4372): Guest Log: total 648436
2025-02-11 00:41:26 (4372): Guest Log: -rwxrwxrwx. 1 root root 342211669 Feb 11 03:47 ATLAS.root_0
2025-02-11 00:41:26 (4372): Guest Log: -rwxrwxrwx. 1 root root 320543186 Feb 11 08:41 HITS.pool.root.1
2025-02-11 00:41:26 (4372): Guest Log: -rwxrwxrwx. 1 root root      8735 Feb 11 03:47 init_data.xml
2025-02-11 00:41:26 (4372): Guest Log: -rwxrwxrwx. 1 root root    503499 Feb 10 14:28 input.tar.gz
2025-02-11 00:41:26 (4372): Guest Log: -rwxrwxrwx. 1 root root   1966080 Feb 11 08:41 result.tar.gz
2025-02-11 00:41:26 (4372): Guest Log: -rwxrwxrwx. 1 root root     17569 Feb 10 14:28 start_atlas.sh
2025-02-11 00:41:26 (4372): Guest Log:  *** Success! Shutting down the machine. ***
2025-02-11 00:41:26 (4372): VM Completion File Detected.
2025-02-11 00:41:26 (4372): Powering off VM.
2025-02-11 00:41:28 (4372): Successfully stopped VM.
2025-02-11 00:41:28 (4372): Deregistering VM. (boinc_24895cbd0978d087, slot#0)
2025-02-11 00:41:28 (4372): Removing network bandwidth throttle group from VM.
2025-02-11 00:41:28 (4372): Removing VM from VirtualBox.
00:41:34 (4372): called boinc_finish(0)

</stderr_txt>
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