Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
2025-02-09 16:38:22 (19437): Detected: vboxwrapper 26206
2025-02-09 16:38:22 (19437): Detected: BOINC client v8.1.0
2025-02-09 16:38:22 (19437): Detected: VirtualBox VboxManage Interface (Version: 7.1.4)
2025-02-09 16:38:22 (19437): Successfully copied 'init_data.xml' to the shared directory.
2025-02-09 16:38:22 (19437): Create VM. (boinc_666cfb4c8a001086, slot#13)
2025-02-09 16:38:24 (19437): Setting Memory Size for VM. (4200MB)
2025-02-09 16:38:24 (19437): Setting CPU Count for VM. (2)
2025-02-09 16:38:24 (19437): Setting Chipset Options for VM.
2025-02-09 16:38:24 (19437): Setting Graphics Controller Options for VM.
2025-02-09 16:38:24 (19437): Setting Boot Options for VM.
2025-02-09 16:38:25 (19437): Setting Network Configuration for NAT.
2025-02-09 16:38:25 (19437): Enabling VM Network Access.
2025-02-09 16:38:25 (19437): Disabling USB Support for VM.
2025-02-09 16:38:25 (19437): Disabling COM Port Support for VM.
2025-02-09 16:38:25 (19437): Disabling LPT Port Support for VM.
2025-02-09 16:38:25 (19437): Disabling Audio Support for VM.
2025-02-09 16:38:25 (19437): Disabling Clipboard Support for VM.
2025-02-09 16:38:26 (19437): Disabling Drag and Drop Support for VM.
2025-02-09 16:38:26 (19437): Adding storage controller(s) to VM.
2025-02-09 16:38:26 (19437): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-02-09 16:38:28 (19437): Adding VirtualBox Guest Additions to VM.
2025-02-09 16:38:28 (19437): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-02-09 16:38:28 (19437): forwarding host port 55743 to guest port 80
2025-02-09 16:38:28 (19437): Enabling remote desktop for VM.
2025-02-09 16:38:29 (19437): Required extension pack not installed, remote desktop not enabled.
2025-02-09 16:38:29 (19437): Enabling shared directory for VM.
2025-02-09 16:38:29 (19437): Starting VM using VBoxManage interface. (boinc_666cfb4c8a001086, slot#13)
2025-02-09 16:38:30 (19437): Successfully started VM. (PID = '19970')
2025-02-09 16:38:30 (19437): Reporting VM Process ID to BOINC.
2025-02-09 16:38:30 (19437): Guest Log: BIOS: VirtualBox 7.1.4
2025-02-09 16:38:30 (19437): Guest Log: CPUID EDX: 0x178bfbff
2025-02-09 16:38:30 (19437): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-02-09 16:38:30 (19437): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-02-09 16:38:30 (19437): VM state change detected. (old = 'poweredoff', new = 'running')
2025-02-09 16:38:30 (19437): Detected: Web Application Enabled (http://localhost:55743)
2025-02-09 16:38:30 (19437): Preference change detected
2025-02-09 16:38:30 (19437): Setting CPU throttle for VM. (100%)
2025-02-09 16:38:30 (19437): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-02-09 16:38:32 (19437): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-02-09 16:38:32 (19437): Guest Log: BIOS: Booting from Hard Disk...
2025-02-09 16:38:35 (19437): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-02-09 16:38:35 (19437): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-02-09 16:38:35 (19437): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-02-09 16:38:35 (19437): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-02-09 16:38:35 (19437): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-02-09 16:38:35 (19437): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-02-09 16:38:35 (19437): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-02-09 16:38:35 (19437): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-02-09 16:38:35 (19437): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-02-09 16:38:35 (19437): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-02-09 16:38:35 (19437): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-02-09 16:38:35 (19437): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-02-09 16:38:35 (19437): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-02-09 16:38:35 (19437): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-02-09 16:38:35 (19437): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-02-09 16:38:35 (19437): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-02-09 16:38:35 (19437): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-02-09 16:38:35 (19437): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-02-09 16:38:35 (19437): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-02-09 16:38:35 (19437): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-02-09 16:38:35 (19437): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-02-09 16:38:35 (19437): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-02-09 16:38:35 (19437): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-02-09 16:38:35 (19437): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-02-09 16:38:35 (19437): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-02-09 16:38:35 (19437): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-02-09 16:38:35 (19437): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-02-09 16:38:35 (19437): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-02-09 16:38:35 (19437): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-02-09 16:38:35 (19437): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-02-09 16:38:35 (19437): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-02-09 16:38:35 (19437): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-02-09 16:38:45 (19437): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-02-09 16:38:45 (19437): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-02-09 16:39:30 (19437): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-02-09 16:39:30 (19437): Guest Log: 00:00:00.000209 main     Log opened 2025-02-09T21:39:28.198434000Z
2025-02-09 16:39:30 (19437): Guest Log: 00:00:00.000328 main     OS Product: Linux
2025-02-09 16:39:30 (19437): Guest Log: 00:00:00.000411 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-02-09 16:39:30 (19437): Guest Log: 00:00:00.000440 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-02-09 16:39:30 (19437): Guest Log: 00:00:00.000475 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-02-09 16:39:30 (19437): Guest Log: 00:00:00.000476 main     Process ID: 1286
2025-02-09 16:39:30 (19437): Guest Log: 00:00:00.000476 main     Package type: LINUX_64BITS_GENERIC
2025-02-09 16:39:30 (19437): Guest Log: 00:00:00.005843 main     5.2.32 r132073 started. Verbose level = 0
2025-02-09 16:39:31 (19437): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-02-09 16:39:31 (19437): Guest Log: [INFO] Mounting shared directory
2025-02-09 16:39:31 (19437): Guest Log: [INFO] Checking for init_data.xml
2025-02-09 16:39:41 (19437): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-02-09 16:39:41 (19437): Guest Log: [INFO] Detected branch: prod
2025-02-09 16:39:41 (19437): Guest Log: This is the prod version of the ATLAS job wrapper
2025-02-09 16:39:41 (19437): Guest Log: Copying input files
2025-02-09 16:40:09 (19437): Guest Log: Copied input files into RunAtlas.
2025-02-09 16:40:09 (19437): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-02-09 16:40:09 (19437): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-02-09 16:40:09 (19437): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-02-09 16:40:09 (19437): Guest Log: Further information can be found at the LHC@home message board.
2025-02-09 16:40:32 (19437): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-02-09 16:40:33 (19437): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-02-09 16:40:33 (19437): Guest Log: 2.6.3.0 1561 0 32112 142460 4 1 3117296 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-02-09 16:40:39 (19437): Guest Log: copied the webapp to /var/www
2025-02-09 16:40:39 (19437): Guest Log: ATHENA_PROC_NUMBER=2
2025-02-09 16:40:39 (19437): Guest Log: ATHENA_CORE_NUMBER=2
2025-02-09 16:40:40 (19437): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-02-09 16:40:40 (19437): Guest Log:  *** Starting ATLAS job. (PandaID=6509464885 taskID=43197887) ***
2025-02-09 18:17:31 (19437): Status Report: Elapsed Time: '6000.000000'
2025-02-09 18:17:31 (19437): Status Report: CPU Time: '9706.330000'
2025-02-09 19:56:32 (19437): Status Report: Elapsed Time: '12000.000000'
2025-02-09 19:56:32 (19437): Status Report: CPU Time: '21561.650000'
2025-02-09 21:35:33 (19437): Status Report: Elapsed Time: '18000.000000'
2025-02-09 21:35:33 (19437): Status Report: CPU Time: '33418.460000'
2025-02-09 23:14:34 (19437): Status Report: Elapsed Time: '24000.000000'
2025-02-09 23:14:34 (19437): Status Report: CPU Time: '45276.530000'
2025-02-10 00:41:09 (19437): Guest Log:  *** Job finished ***
2025-02-10 00:41:09 (19437): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-02-10 00:41:09 (19437): Guest Log: 2025-02-10 05:40:58,040 | INFO     | [payload] validate_post thread has finished
2025-02-10 00:41:09 (19437): Guest Log: 2025-02-10 05:40:58,155 | INFO     | [data] copytool_out thread has finished
2025-02-10 00:41:09 (19437): Guest Log: 2025-02-10 05:41:01,909 | INFO     | [data] queue_monitor thread has finished
2025-02-10 00:41:09 (19437): Guest Log: 2025-02-10 05:41:02,929 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140552649246528)>', '<ExcThread(monitor, started 140551395473152)>']
2025-02-10 00:41:09 (19437): Guest Log: 2025-02-10 05:41:03,429 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-02-10 00:41:09 (19437): Guest Log: 2025-02-10 05:41:03,429 | INFO     | [monitor] control thread has ended
2025-02-10 00:41:09 (19437): Guest Log: 2025-02-10 05:41:07,935 | INFO     | all workflow threads have been joined
2025-02-10 00:41:09 (19437): Guest Log: 2025-02-10 05:41:07,935 | INFO     | end of generic workflow (traces error code: 0)
2025-02-10 00:41:09 (19437): Guest Log: 2025-02-10 05:41:07,935 | INFO     | traces error code: 0
2025-02-10 00:41:09 (19437): Guest Log: 2025-02-10 05:41:07,935 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-02-10 00:41:09 (19437): Guest Log: 2025-02-10 05:41:08,072 [wrapper] ==== pilot stdout END ====
2025-02-10 00:41:09 (19437): Guest Log: 2025-02-10 05:41:08,077 [wrapper] ==== wrapper stdout RESUME ====
2025-02-10 00:41:09 (19437): Guest Log: 2025-02-10 05:41:08,083 [wrapper] pilotpid: 5916
2025-02-10 00:41:09 (19437): Guest Log: 2025-02-10 05:41:08,088 [wrapper] Pilot exit status: 0
2025-02-10 00:41:09 (19437): Guest Log: 2025-02-10 05:41:08,171 [wrapper] pandaids: 6509464885
2025-02-10 00:41:09 (19437): Guest Log: 2025-02-10 05:41:08,207 [wrapper] cleanup supervisor_pilot  5276 5917
2025-02-10 00:41:09 (19437): Guest Log: 2025-02-10 05:41:08,212 [wrapper] Test setup, not cleaning
2025-02-10 00:41:09 (19437): Guest Log: 2025-02-10 05:41:08,220 [wrapper] apfmon messages muted
2025-02-10 00:41:09 (19437): Guest Log: 2025-02-10 05:41:08,224 [wrapper] ==== wrapper stdout END ====
2025-02-10 00:41:09 (19437): Guest Log: 2025-02-10 05:41:08,228 [wrapper] ==== wrapper stderr END ====
2025-02-10 00:41:09 (19437): Guest Log:  *** Error codes and diagnostics ***
2025-02-10 00:41:09 (19437): Guest Log:     "exeErrorCode": 0,
2025-02-10 00:41:09 (19437): Guest Log:     "exeErrorDiag": "",
2025-02-10 00:41:09 (19437): Guest Log:     "pilotErrorCode": 0,
2025-02-10 00:41:09 (19437): Guest Log:     "pilotErrorDiag": "",
2025-02-10 00:41:09 (19437): Guest Log:  *** Listing of results directory ***
2025-02-10 00:41:09 (19437): Guest Log: total 308744
2025-02-10 00:41:09 (19437): Guest Log: -rw-r--r--. 1 atlas atlas    491065 Feb  9 18:59 pilot3.tar.gz
2025-02-10 00:41:09 (19437): Guest Log: -rw-r--r--. 1 atlas atlas      5117 Feb  9 19:02 queuedata.json
2025-02-10 00:41:09 (19437): Guest Log: -rwx------. 1 atlas atlas     34924 Feb  9 19:02 runpilot2-wrapper.sh
2025-02-10 00:41:09 (19437): Guest Log: -rw-r--r--. 1 atlas atlas      9082 Feb  9 21:39 init_data.xml
2025-02-10 00:41:09 (19437): Guest Log: -rw-r--r--. 1 atlas atlas    503491 Feb  9 21:39 input.tar.gz
2025-02-10 00:41:09 (19437): Guest Log: -rw-r--r--. 1 atlas atlas     17569 Feb  9 21:39 start_atlas.sh
2025-02-10 00:41:09 (19437): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb  9 21:40 EVNT.43092741._000476.pool.root.1 -> /data/./ATLAS.root_0
2025-02-10 00:41:09 (19437): Guest Log: -rw-r--r--. 1 atlas atlas      2527 Feb  9 21:40 pandaJob.out
2025-02-10 00:41:09 (19437): Guest Log: -rw-------. 1 atlas atlas       424 Feb  9 21:40 setup.sh.local
2025-02-10 00:41:09 (19437): Guest Log: -rw-------. 1 atlas atlas    983565 Feb  9 21:42 agis_schedconf.cvmfs.json
2025-02-10 00:41:09 (19437): Guest Log: drwx------. 4 atlas atlas      4096 Feb  9 21:42 pilot3
2025-02-10 00:41:09 (19437): Guest Log: -rw-------. 1 atlas atlas 305017304 Feb 10 05:39 HITS.43197887._020375.pool.root.1
2025-02-10 00:41:09 (19437): Guest Log: -rw-------. 1 atlas atlas      1034 Feb 10 05:39 memory_monitor_summary.json
2025-02-10 00:41:09 (19437): Guest Log: -rw-------. 1 atlas atlas        95 Feb 10 05:39 pilot_heartbeat.json
2025-02-10 00:41:09 (19437): Guest Log: -rw-------. 1 atlas atlas   1587792 Feb 10 05:40 agis_ddmendpoints.agis.ALL.json
2025-02-10 00:41:09 (19437): Guest Log: -rw-------. 1 atlas atlas    437830 Feb 10 05:40 log.43197887._020375.job.log.tgz.1
2025-02-10 00:41:09 (19437): Guest Log: -rw-------. 1 atlas atlas      7713 Feb 10 05:40 heartbeat.json
2025-02-10 00:41:09 (19437): Guest Log: -rw-------. 1 atlas atlas      4275 Feb 10 05:41 pilotlog.txt
2025-02-10 00:41:09 (19437): Guest Log: -rw-------. 1 atlas atlas   3261567 Feb 10 05:41 log.43197887._020375.job.log.1
2025-02-10 00:41:09 (19437): Guest Log: -rw-------. 1 atlas atlas       357 Feb 10 05:41 output.list
2025-02-10 00:41:09 (19437): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb 10 05:41 runtime_log
2025-02-10 00:41:09 (19437): Guest Log: -rw-------. 1 atlas atlas   3717120 Feb 10 05:41 result.tar.gz
2025-02-10 00:41:09 (19437): Guest Log: -rw-r--r--. 1 atlas atlas     10926 Feb 10 05:41 runtime_log.err
2025-02-10 00:41:09 (19437): Guest Log: -rw-------. 1 atlas atlas       658 Feb 10 05:41 p8cMDmXkR16n9Rq4apOajLDm4fhM0noT9bVoFjIUDmDYNKDmdzAV9m.diag
2025-02-10 00:41:09 (19437): Guest Log: Looking for outputfile HITS.43197887._020375.pool.root.1
2025-02-10 00:41:09 (19437): Guest Log: HITS file was successfully produced
2025-02-10 00:41:09 (19437): Guest Log: -rw-------. 1 atlas atlas 305017304 Feb 10 05:39 /home/atlas/RunAtlas/HITS.43197887._020375.pool.root.1
2025-02-10 00:41:09 (19437): Guest Log: Successfully finished the ATLAS job!
2025-02-10 00:41:09 (19437): Guest Log: Copying the results back to the shared directory!
2025-02-10 00:41:09 (19437): Guest Log:  *** Contents of shared directory: ***
2025-02-10 00:41:10 (19437): Guest Log: total 330532
2025-02-10 00:41:10 (19437): Guest Log: -rw-r--r--. 1 root root 334201553 Feb  9 21:38 ATLAS.root_0
2025-02-10 00:41:10 (19437): Guest Log: -rw-r--r--. 1 root root      9082 Feb  9 21:38 init_data.xml
2025-02-10 00:41:10 (19437): Guest Log: -rw-r--r--. 1 root root    503491 Feb  9 21:38 input.tar.gz
2025-02-10 00:41:10 (19437): Guest Log: -rw-r--r--. 1 root root   3717120 Feb 10 05:41 result.tar.gz
2025-02-10 00:41:10 (19437): Guest Log: -rw-r--r--. 1 root root     17569 Feb  9 21:38 start_atlas.sh
2025-02-10 00:41:10 (19437): Guest Log:  *** Success! Shutting down the machine. ***
2025-02-10 00:41:10 (19437): VM Completion File Detected.
2025-02-10 00:41:10 (19437): Powering off VM.
2025-02-10 00:41:11 (19437): Successfully stopped VM.
2025-02-10 00:41:11 (19437): Deregistering VM. (boinc_666cfb4c8a001086, slot#13)
2025-02-10 00:41:11 (19437): Removing network bandwidth throttle group from VM.
2025-02-10 00:41:11 (19437): Removing VM from VirtualBox.
00:41:16 (19437): called boinc_finish(0)

</stderr_txt>
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