Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-02-11 11:44:32 (15156): Detected: vboxwrapper 26206
2025-02-11 11:44:32 (15156): Detected: BOINC client v8.0.2
2025-02-11 11:44:33 (15156): Detected: VirtualBox VboxManage Interface (Version: 7.0.8)
2025-02-11 11:44:33 (15156): Successfully copied 'init_data.xml' to the shared directory.
2025-02-11 11:44:34 (15156): Create VM. (boinc_869dc189b68b86c0, slot#0)
2025-02-11 11:44:34 (15156): Setting Memory Size for VM. (4600MB)
2025-02-11 11:44:35 (15156): Setting CPU Count for VM. (6)
2025-02-11 11:44:35 (15156): Setting Chipset Options for VM.
2025-02-11 11:44:35 (15156): Setting Graphics Controller Options for VM.
2025-02-11 11:44:35 (15156): Setting Boot Options for VM.
2025-02-11 11:44:36 (15156): Setting Network Configuration for NAT.
2025-02-11 11:44:36 (15156): Enabling VM Network Access.
2025-02-11 11:44:36 (15156): Disabling USB Support for VM.
2025-02-11 11:44:37 (15156): Disabling COM Port Support for VM.
2025-02-11 11:44:37 (15156): Disabling LPT Port Support for VM.
2025-02-11 11:44:37 (15156): Disabling Audio Support for VM.
2025-02-11 11:44:37 (15156): Disabling Clipboard Support for VM.
2025-02-11 11:44:38 (15156): Disabling Drag and Drop Support for VM.
2025-02-11 11:44:38 (15156): Adding storage controller(s) to VM.
2025-02-11 11:44:38 (15156): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-02-11 11:44:41 (15156): Adding VirtualBox Guest Additions to VM.
2025-02-11 11:44:41 (15156): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-02-11 11:44:42 (15156): forwarding host port 51420 to guest port 80
2025-02-11 11:44:42 (15156): Enabling remote desktop for VM.
2025-02-11 11:44:42 (15156): Enabling shared directory for VM.
2025-02-11 11:44:43 (15156): Starting VM using VBoxManage interface. (boinc_869dc189b68b86c0, slot#0)
2025-02-11 11:44:50 (15156): Successfully started VM. (PID = '4120')
2025-02-11 11:44:50 (15156): Reporting VM Process ID to BOINC.
2025-02-11 11:44:50 (15156): Guest Log: BIOS: VirtualBox 7.0.8
2025-02-11 11:44:50 (15156): Guest Log: CPUID EDX: 0x178bfbff
2025-02-11 11:44:50 (15156): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-02-11 11:44:50 (15156): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-02-11 11:44:50 (15156): VM state change detected. (old = 'poweredoff', new = 'running')
2025-02-11 11:44:50 (15156): Detected: Web Application Enabled (http://localhost:51420)
2025-02-11 11:44:50 (15156): Detected: Remote Desktop Enabled (localhost:51424)
2025-02-11 11:44:50 (15156): Preference change detected
2025-02-11 11:44:50 (15156): Setting CPU throttle for VM. (65%)
2025-02-11 11:44:51 (15156): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 500 seconds) or (Vbox_job.xml: 900 seconds))
2025-02-11 11:44:52 (15156): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-02-11 11:44:52 (15156): Guest Log: BIOS: Booting from Hard Disk...
2025-02-11 11:44:55 (15156): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-02-11 11:44:55 (15156): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-02-11 11:44:55 (15156): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-02-11 11:44:55 (15156): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-02-11 11:44:55 (15156): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-02-11 11:44:55 (15156): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-02-11 11:44:55 (15156): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-02-11 11:44:55 (15156): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-02-11 11:44:55 (15156): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-02-11 11:44:55 (15156): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-02-11 11:44:55 (15156): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-02-11 11:44:55 (15156): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-02-11 11:44:55 (15156): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-02-11 11:44:55 (15156): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-02-11 11:44:55 (15156): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-02-11 11:44:55 (15156): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-02-11 11:44:55 (15156): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-02-11 11:44:55 (15156): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-02-11 11:44:55 (15156): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-02-11 11:44:55 (15156): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-02-11 11:44:55 (15156): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-02-11 11:44:55 (15156): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-02-11 11:44:55 (15156): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-02-11 11:44:55 (15156): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-02-11 11:44:55 (15156): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-02-11 11:44:55 (15156): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-02-11 11:44:55 (15156): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-02-11 11:44:55 (15156): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-02-11 11:44:55 (15156): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-02-11 11:44:55 (15156): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-02-11 11:44:55 (15156): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-02-11 11:44:55 (15156): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-02-11 11:45:02 (15156): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-02-11 11:45:02 (15156): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-02-11 11:45:08 (15156): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-02-11 11:45:08 (15156): Guest Log: 00:00:00.000134 main     Log opened 2025-02-11T11:45:05.690887000Z
2025-02-11 11:45:08 (15156): Guest Log: 00:00:00.000210 main     OS Product: Linux
2025-02-11 11:45:08 (15156): Guest Log: 00:00:00.000238 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-02-11 11:45:08 (15156): Guest Log: 00:00:00.000260 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-02-11 11:45:08 (15156): Guest Log: 00:00:00.000283 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-02-11 11:45:08 (15156): Guest Log: 00:00:00.000284 main     Process ID: 1331
2025-02-11 11:45:08 (15156): Guest Log: 00:00:00.000284 main     Package type: LINUX_64BITS_GENERIC
2025-02-11 11:45:08 (15156): Guest Log: 00:00:00.002059 main     5.2.32 r132073 started. Verbose level = 0
2025-02-11 11:45:08 (15156): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-02-11 11:45:08 (15156): Guest Log: [INFO] Mounting shared directory
2025-02-11 11:45:08 (15156): Guest Log: [INFO] Checking for init_data.xml
2025-02-11 11:45:12 (15156): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-02-11 11:45:12 (15156): Guest Log: [INFO] Detected branch: prod
2025-02-11 11:45:13 (15156): Guest Log: This is the prod version of the ATLAS job wrapper
2025-02-11 11:45:13 (15156): Guest Log: Copying input files
2025-02-11 11:45:14 (15156): Guest Log: Copied input files into RunAtlas.
2025-02-11 11:45:14 (15156): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-02-11 11:45:14 (15156): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-02-11 11:45:14 (15156): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-02-11 11:45:14 (15156): Guest Log: Further information can be found at the LHC@home message board.
2025-02-11 11:45:17 (15156): Guest Log: 00:00:10.013143 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 555 661 000ns (GuestNow=1 739 270 717 138 549 000 ns GuestLast=1 739 274 305 694 210 000 ns fSetTimeLastLoop=true )
2025-02-11 11:45:25 (15156): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-02-11 11:45:26 (15156): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-02-11 11:45:26 (15156): Guest Log: 2.6.3.0 1611 0 30156 142517 4 1 3117296 4096000 0 65024 0 0 n/a 0 0 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-02-11 11:45:28 (15156): Guest Log: copied the webapp to /var/www
2025-02-11 11:45:28 (15156): Guest Log: ATHENA_PROC_NUMBER=6
2025-02-11 11:45:28 (15156): Guest Log: ATHENA_CORE_NUMBER=6
2025-02-11 11:45:28 (15156): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-02-11 11:45:28 (15156): Guest Log:  *** Starting ATLAS job. (PandaID=6509169939 taskID=43197887) ***
2025-02-11 13:24:54 (15156): Status Report: Elapsed Time: '6000.000000'
2025-02-11 13:24:54 (15156): Status Report: CPU Time: '21151.031250'
2025-02-11 15:04:56 (15156): Status Report: Elapsed Time: '12000.000000'
2025-02-11 15:04:56 (15156): Status Report: CPU Time: '48132.968750'
2025-02-11 16:44:59 (15156): Status Report: Elapsed Time: '18000.000000'
2025-02-11 16:44:59 (15156): Status Report: CPU Time: '75132.203125'
2025-02-11 17:39:24 (15156): Guest Log:  *** Job finished ***
2025-02-11 17:39:24 (15156): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-02-11 17:39:24 (15156): Guest Log: 2025-02-11 16:39:13,041 | INFO     | [job] control thread has finished
2025-02-11 17:39:24 (15156): Guest Log: 2025-02-11 16:39:13,293 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
2025-02-11 17:39:24 (15156): Guest Log: 2025-02-11 16:39:17,306 | INFO     | [data] queue_monitor thread has finished
2025-02-11 17:39:24 (15156): Guest Log: 2025-02-11 16:39:17,804 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140142453806912)>', '<ExcThread(monitor, started 140141494531840)>']
2025-02-11 17:39:24 (15156): Guest Log: 2025-02-11 16:39:18,467 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-02-11 17:39:24 (15156): Guest Log: 2025-02-11 16:39:18,467 | INFO     | [monitor] control thread has ended
2025-02-11 17:39:24 (15156): Guest Log: 2025-02-11 16:39:22,832 | INFO     | all workflow threads have been joined
2025-02-11 17:39:24 (15156): Guest Log: 2025-02-11 16:39:22,832 | INFO     | end of generic workflow (traces error code: 0)
2025-02-11 17:39:24 (15156): Guest Log: 2025-02-11 16:39:22,832 | INFO     | traces error code: 0
2025-02-11 17:39:24 (15156): Guest Log: 2025-02-11 16:39:22,832 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-02-11 17:39:24 (15156): Guest Log: 2025-02-11 16:39:22,910 [wrapper] ==== pilot stdout END ====
2025-02-11 17:39:24 (15156): Guest Log: 2025-02-11 16:39:22,914 [wrapper] ==== wrapper stdout RESUME ====
2025-02-11 17:39:24 (15156): Guest Log: 2025-02-11 16:39:22,917 [wrapper] pilotpid: 5956
2025-02-11 17:39:24 (15156): Guest Log: 2025-02-11 16:39:22,920 [wrapper] Pilot exit status: 0
2025-02-11 17:39:24 (15156): Guest Log: 2025-02-11 16:39:23,015 [wrapper] pandaids: 6509169939
2025-02-11 17:39:24 (15156): Guest Log: 2025-02-11 16:39:23,039 [wrapper] cleanup supervisor_pilot 24517 5957
2025-02-11 17:39:24 (15156): Guest Log: 2025-02-11 16:39:23,043 [wrapper] Test setup, not cleaning
2025-02-11 17:39:24 (15156): Guest Log: 2025-02-11 16:39:23,050 [wrapper] apfmon messages muted
2025-02-11 17:39:24 (15156): Guest Log: 2025-02-11 16:39:23,054 [wrapper] ==== wrapper stdout END ====
2025-02-11 17:39:24 (15156): Guest Log: 2025-02-11 16:39:23,057 [wrapper] ==== wrapper stderr END ====
2025-02-11 17:39:24 (15156): Guest Log:  *** Error codes and diagnostics ***
2025-02-11 17:39:24 (15156): Guest Log:     "exeErrorCode": 0,
2025-02-11 17:39:24 (15156): Guest Log:     "exeErrorDiag": "",
2025-02-11 17:39:24 (15156): Guest Log:     "pilotErrorCode": 0,
2025-02-11 17:39:24 (15156): Guest Log:     "pilotErrorDiag": "",
2025-02-11 17:39:24 (15156): Guest Log:  *** Listing of results directory ***
2025-02-11 17:39:24 (15156): Guest Log: total 311436
2025-02-11 17:39:24 (15156): Guest Log: -rw-r--r--. 1 atlas atlas    491065 Feb  9 16:12 pilot3.tar.gz
2025-02-11 17:39:24 (15156): Guest Log: -rwx------. 1 atlas atlas     34924 Feb  9 16:22 runpilot2-wrapper.sh
2025-02-11 17:39:24 (15156): Guest Log: -rw-r--r--. 1 atlas atlas      5117 Feb  9 16:22 queuedata.json
2025-02-11 17:39:24 (15156): Guest Log: -rwxr-xr-x. 1 atlas atlas      9199 Feb 11 10:45 init_data.xml
2025-02-11 17:39:24 (15156): Guest Log: -rwxr-xr-x. 1 atlas atlas    503497 Feb 11 10:45 input.tar.gz
2025-02-11 17:39:24 (15156): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Feb 11 10:45 start_atlas.sh
2025-02-11 17:39:24 (15156): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb 11 10:45 EVNT.43092741._000452.pool.root.1 -> /data/./ATLAS.root_0
2025-02-11 17:39:24 (15156): Guest Log: -rw-r--r--. 1 atlas atlas      2527 Feb 11 10:45 pandaJob.out
2025-02-11 17:39:24 (15156): Guest Log: -rw-------. 1 atlas atlas       424 Feb 11 10:45 setup.sh.local
2025-02-11 17:39:24 (15156): Guest Log: -rw-------. 1 atlas atlas    984399 Feb 11 10:46 agis_schedconf.cvmfs.json
2025-02-11 17:39:24 (15156): Guest Log: drwx------. 4 atlas atlas      4096 Feb 11 10:46 pilot3
2025-02-11 17:39:24 (15156): Guest Log: -rw-------. 1 atlas atlas 311035447 Feb 11 16:38 HITS.43197887._018623.pool.root.1
2025-02-11 17:39:24 (15156): Guest Log: -rw-------. 1 atlas atlas        95 Feb 11 16:38 pilot_heartbeat.json
2025-02-11 17:39:24 (15156): Guest Log: -rw-------. 1 atlas atlas      1035 Feb 11 16:38 memory_monitor_summary.json
2025-02-11 17:39:24 (15156): Guest Log: -rw-------. 1 atlas atlas   1591814 Feb 11 16:38 agis_ddmendpoints.agis.ALL.json
2025-02-11 17:39:24 (15156): Guest Log: -rw-------. 1 atlas atlas    405044 Feb 11 16:38 log.43197887._018623.job.log.tgz.1
2025-02-11 17:39:24 (15156): Guest Log: -rw-------. 1 atlas atlas      7748 Feb 11 16:39 heartbeat.json
2025-02-11 17:39:24 (15156): Guest Log: -rw-------. 1 atlas atlas      4275 Feb 11 16:39 pilotlog.txt
2025-02-11 17:39:24 (15156): Guest Log: -rw-------. 1 atlas atlas   1661624 Feb 11 16:39 log.43197887._018623.job.log.1
2025-02-11 17:39:24 (15156): Guest Log: -rw-------. 1 atlas atlas       357 Feb 11 16:39 output.list
2025-02-11 17:39:24 (15156): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb 11 16:39 runtime_log
2025-02-11 17:39:24 (15156): Guest Log: -rw-------. 1 atlas atlas   2088960 Feb 11 16:39 result.tar.gz
2025-02-11 17:39:24 (15156): Guest Log: -rw-r--r--. 1 atlas atlas     10957 Feb 11 16:39 runtime_log.err
2025-02-11 17:39:24 (15156): Guest Log: -rw-------. 1 atlas atlas       666 Feb 11 16:39 kNSNDmWFP16nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmiXSKDmXk00bn.diag
2025-02-11 17:39:24 (15156): Guest Log: Looking for outputfile HITS.43197887._018623.pool.root.1
2025-02-11 17:39:24 (15156): Guest Log: HITS file was successfully produced
2025-02-11 17:39:24 (15156): Guest Log: -rw-------. 1 atlas atlas 311035447 Feb 11 16:38 /home/atlas/RunAtlas/HITS.43197887._018623.pool.root.1
2025-02-11 17:39:25 (15156): Guest Log: Successfully finished the ATLAS job!
2025-02-11 17:39:25 (15156): Guest Log: Copying the results back to the shared directory!
2025-02-11 17:39:25 (15156): Guest Log:  *** Contents of shared directory: ***
2025-02-11 17:39:25 (15156): Guest Log: total 634548
2025-02-11 17:39:25 (15156): Guest Log: -rwxrwxrwx. 1 root root 336112560 Feb 11 10:44 ATLAS.root_0
2025-02-11 17:39:25 (15156): Guest Log: -rwxrwxrwx. 1 root root 311035447 Feb 11 16:39 HITS.pool.root.1
2025-02-11 17:39:25 (15156): Guest Log: -rwxrwxrwx. 1 root root      9199 Feb 11 10:44 init_data.xml
2025-02-11 17:39:25 (15156): Guest Log: -rwxrwxrwx. 1 root root    503497 Feb  9 19:14 input.tar.gz
2025-02-11 17:39:25 (15156): Guest Log: -rwxrwxrwx. 1 root root   2088960 Feb 11 16:39 result.tar.gz
2025-02-11 17:39:25 (15156): Guest Log: -rwxrwxrwx. 1 root root     17569 Feb  9 19:14 start_atlas.sh
2025-02-11 17:39:25 (15156): Guest Log:  *** Success! Shutting down the machine. ***
2025-02-11 17:39:25 (15156): VM Completion File Detected.
2025-02-11 17:39:25 (15156): Powering off VM.
2025-02-11 17:39:25 (15156): Successfully stopped VM.
2025-02-11 17:39:25 (15156): Deregistering VM. (boinc_869dc189b68b86c0, slot#0)
2025-02-11 17:39:25 (15156): Removing network bandwidth throttle group from VM.
2025-02-11 17:39:26 (15156): Removing VM from VirtualBox.
17:39:31 (15156): called boinc_finish(0)

</stderr_txt>
]]>

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