Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-02-10 04:15:23 (12020): Detected: vboxwrapper 26206
2025-02-10 04:15:23 (12020): Detected: BOINC client v8.0.2
2025-02-10 04:15:23 (12020): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-02-10 04:15:24 (12020): Successfully copied 'init_data.xml' to the shared directory.
2025-02-10 04:15:24 (12020): Create VM. (boinc_60667197b7097da0, slot#3)
2025-02-10 04:15:25 (12020): Setting Memory Size for VM. (4800MB)
2025-02-10 04:15:25 (12020): Setting CPU Count for VM. (8)
2025-02-10 04:15:25 (12020): Setting Chipset Options for VM.
2025-02-10 04:15:26 (12020): Setting Graphics Controller Options for VM.
2025-02-10 04:15:26 (12020): Setting Boot Options for VM.
2025-02-10 04:15:26 (12020): Setting Network Configuration for NAT.
2025-02-10 04:15:27 (12020): Enabling VM Network Access.
2025-02-10 04:15:27 (12020): Disabling USB Support for VM.
2025-02-10 04:15:27 (12020): Disabling COM Port Support for VM.
2025-02-10 04:15:28 (12020): Disabling LPT Port Support for VM.
2025-02-10 04:15:28 (12020): Disabling Audio Support for VM.
2025-02-10 04:15:28 (12020): Disabling Clipboard Support for VM.
2025-02-10 04:15:28 (12020): Disabling Drag and Drop Support for VM.
2025-02-10 04:15:29 (12020): Adding storage controller(s) to VM.
2025-02-10 04:15:29 (12020): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-02-10 04:15:30 (12020): Adding VirtualBox Guest Additions to VM.
2025-02-10 04:15:30 (12020): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-02-10 04:15:30 (12020): forwarding host port 56251 to guest port 80
2025-02-10 04:15:31 (12020): Enabling remote desktop for VM.
2025-02-10 04:15:31 (12020): Required extension pack not installed, remote desktop not enabled.
2025-02-10 04:15:31 (12020): Enabling shared directory for VM.
2025-02-10 04:15:32 (12020): Starting VM using VBoxManage interface. (boinc_60667197b7097da0, slot#3)
2025-02-10 04:15:36 (12020): Successfully started VM. (PID = '3636')
2025-02-10 04:15:36 (12020): Reporting VM Process ID to BOINC.
2025-02-10 04:15:36 (12020): Guest Log: BIOS: VirtualBox 7.0.6
2025-02-10 04:15:36 (12020): Guest Log: CPUID EDX: 0x178bfbff
2025-02-10 04:15:36 (12020): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-02-10 04:15:36 (12020): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-02-10 04:15:36 (12020): VM state change detected. (old = 'poweredoff', new = 'running')
2025-02-10 04:15:36 (12020): Detected: Web Application Enabled (http://localhost:56251)
2025-02-10 04:15:36 (12020): Preference change detected
2025-02-10 04:15:36 (12020): Setting CPU throttle for VM. (50%)
2025-02-10 04:15:37 (12020): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-02-10 04:15:38 (12020): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-02-10 04:15:38 (12020): Guest Log: BIOS: Booting from Hard Disk...
2025-02-10 04:15:41 (12020): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-02-10 04:15:41 (12020): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-02-10 04:15:41 (12020): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-02-10 04:15:41 (12020): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-02-10 04:15:41 (12020): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-02-10 04:15:41 (12020): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-02-10 04:15:41 (12020): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-02-10 04:15:41 (12020): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-02-10 04:15:41 (12020): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-02-10 04:15:41 (12020): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-02-10 04:15:41 (12020): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-02-10 04:15:41 (12020): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-02-10 04:15:41 (12020): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-02-10 04:15:41 (12020): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-02-10 04:15:41 (12020): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-02-10 04:15:41 (12020): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-02-10 04:15:41 (12020): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-02-10 04:15:41 (12020): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-02-10 04:15:41 (12020): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-02-10 04:15:41 (12020): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-02-10 04:15:41 (12020): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-02-10 04:15:41 (12020): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-02-10 04:15:41 (12020): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-02-10 04:15:41 (12020): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-02-10 04:15:41 (12020): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-02-10 04:15:41 (12020): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-02-10 04:15:41 (12020): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-02-10 04:15:41 (12020): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-02-10 04:15:41 (12020): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-02-10 04:15:41 (12020): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-02-10 04:15:41 (12020): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-02-10 04:15:41 (12020): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-02-10 04:15:49 (12020): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-02-10 04:15:49 (12020): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-02-10 04:15:58 (12020): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-02-10 04:15:58 (12020): Guest Log: 00:00:00.000126 main     Log opened 2025-02-10T04:15:57.123463000Z
2025-02-10 04:15:58 (12020): Guest Log: 00:00:00.000249 main     OS Product: Linux
2025-02-10 04:15:58 (12020): Guest Log: 00:00:00.000293 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-02-10 04:15:58 (12020): Guest Log: 00:00:00.000325 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-02-10 04:15:58 (12020): Guest Log: 00:00:00.000357 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-02-10 04:15:58 (12020): Guest Log: 00:00:00.000357 main     Process ID: 1362
2025-02-10 04:15:58 (12020): Guest Log: 00:00:00.000358 main     Package type: LINUX_64BITS_GENERIC
2025-02-10 04:15:58 (12020): Guest Log: 00:00:00.008263 main     5.2.32 r132073 started. Verbose level = 0
2025-02-10 04:15:58 (12020): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-02-10 04:15:58 (12020): Guest Log: [INFO] Mounting shared directory
2025-02-10 04:15:59 (12020): Guest Log: [INFO] Checking for init_data.xml
2025-02-10 04:16:05 (12020): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-02-10 04:16:05 (12020): Guest Log: [INFO] Detected branch: prod
2025-02-10 04:16:06 (12020): Guest Log: This is the prod version of the ATLAS job wrapper
2025-02-10 04:16:06 (12020): Guest Log: Copying input files
2025-02-10 04:16:08 (12020): Guest Log: Copied input files into RunAtlas.
2025-02-10 04:16:08 (12020): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-02-10 04:16:08 (12020): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-02-10 04:16:08 (12020): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-02-10 04:16:08 (12020): Guest Log: Further information can be found at the LHC@home message board.
2025-02-10 04:16:08 (12020): Guest Log: 00:00:10.091624 timesync vgsvcTimeSyncWorker: Radical guest time change: 25 211 361 087 000ns (GuestNow=1 739 186 168 497 007 000 ns GuestLast=1 739 160 957 135 920 000 ns fSetTimeLastLoop=true )
2025-02-10 04:16:18 (12020): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-02-10 04:16:18 (12020): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-02-10 04:16:18 (12020): Guest Log: 2.6.3.0 1661 0 34188 142482 4 1 3119916 4096000 0 65024 0 0 n/a 1169 728 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-02-10 04:16:20 (12020): Guest Log: copied the webapp to /var/www
2025-02-10 04:16:20 (12020): Guest Log: ATHENA_PROC_NUMBER=8
2025-02-10 04:16:20 (12020): Guest Log: ATHENA_CORE_NUMBER=8
2025-02-10 04:16:20 (12020): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-02-10 04:16:20 (12020): Guest Log:  *** Starting ATLAS job. (PandaID=6508514536 taskID=43197887) ***
2025-02-10 05:55:40 (12020): Status Report: Elapsed Time: '6000.000000'
2025-02-10 05:55:40 (12020): Status Report: CPU Time: '16053.015625'
2025-02-10 07:35:45 (12020): Status Report: Elapsed Time: '12000.000000'
2025-02-10 07:35:45 (12020): Status Report: CPU Time: '35729.203125'
2025-02-10 09:15:49 (12020): Status Report: Elapsed Time: '18000.000000'
2025-02-10 09:15:49 (12020): Status Report: CPU Time: '55771.218750'
2025-02-10 09:24:18 (12020): Guest Log:  *** Job finished ***
2025-02-10 09:24:18 (12020): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-02-10 09:24:18 (12020): Guest Log: 2025-02-10 16:24:05,354 | INFO     | [payload] failed_post thread has finished
2025-02-10 09:24:18 (12020): Guest Log: 2025-02-10 16:24:05,593 | INFO     | [data] copytool_out thread has finished
2025-02-10 09:24:18 (12020): Guest Log: 2025-02-10 16:24:08,221 | INFO     | [data] queue_monitor thread has finished
2025-02-10 09:24:18 (12020): Guest Log: 2025-02-10 16:24:10,414 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139671316326208)>', '<ExcThread(monitor, started 139671011038976)>']
2025-02-10 09:24:18 (12020): Guest Log: 2025-02-10 16:24:10,912 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-02-10 09:24:18 (12020): Guest Log: 2025-02-10 16:24:10,912 | INFO     | [monitor] control thread has ended
2025-02-10 09:24:18 (12020): Guest Log: 2025-02-10 16:24:15,424 | INFO     | all workflow threads have been joined
2025-02-10 09:24:18 (12020): Guest Log: 2025-02-10 16:24:15,424 | INFO     | end of generic workflow (traces error code: 0)
2025-02-10 09:24:18 (12020): Guest Log: 2025-02-10 16:24:15,424 | INFO     | traces error code: 0
2025-02-10 09:24:18 (12020): Guest Log: 2025-02-10 16:24:15,424 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-02-10 09:24:18 (12020): Guest Log: 2025-02-10 16:24:15,540 [wrapper] ==== pilot stdout END ====
2025-02-10 09:24:18 (12020): Guest Log: 2025-02-10 16:24:15,546 [wrapper] ==== wrapper stdout RESUME ====
2025-02-10 09:24:18 (12020): Guest Log: 2025-02-10 16:24:15,551 [wrapper] pilotpid: 6042
2025-02-10 09:24:18 (12020): Guest Log: 2025-02-10 16:24:15,556 [wrapper] Pilot exit status: 0
2025-02-10 09:24:18 (12020): Guest Log: 2025-02-10 16:24:15,735 [wrapper] pandaids: 6508514536
2025-02-10 09:24:18 (12020): Guest Log: 2025-02-10 16:24:15,792 [wrapper] cleanup supervisor_pilot 16492 6043
2025-02-10 09:24:18 (12020): Guest Log: 2025-02-10 16:24:15,801 [wrapper] Test setup, not cleaning
2025-02-10 09:24:18 (12020): Guest Log: 2025-02-10 16:24:15,855 [wrapper] apfmon messages muted
2025-02-10 09:24:18 (12020): Guest Log: 2025-02-10 16:24:15,865 [wrapper] ==== wrapper stdout END ====
2025-02-10 09:24:18 (12020): Guest Log: 2025-02-10 16:24:15,881 [wrapper] ==== wrapper stderr END ====
2025-02-10 09:24:18 (12020): Guest Log:  *** Error codes and diagnostics ***
2025-02-10 09:24:18 (12020): Guest Log:     "exeErrorCode": 0,
2025-02-10 09:24:18 (12020): Guest Log:     "exeErrorDiag": "",
2025-02-10 09:24:18 (12020): Guest Log:     "pilotErrorCode": 0,
2025-02-10 09:24:18 (12020): Guest Log:     "pilotErrorDiag": "",
2025-02-10 09:24:18 (12020): Guest Log:  *** Listing of results directory ***
2025-02-10 09:24:18 (12020): Guest Log: total 308332
2025-02-10 09:24:18 (12020): Guest Log: -rw-r--r--. 1 atlas atlas    491065 Feb  9 11:16 pilot3.tar.gz
2025-02-10 09:24:18 (12020): Guest Log: -rwx------. 1 atlas atlas     34924 Feb  9 11:20 runpilot2-wrapper.sh
2025-02-10 09:24:18 (12020): Guest Log: -rw-r--r--. 1 atlas atlas      5117 Feb  9 11:20 queuedata.json
2025-02-10 09:24:18 (12020): Guest Log: -rwxr-xr-x. 1 atlas atlas     12260 Feb 10 11:16 init_data.xml
2025-02-10 09:24:18 (12020): Guest Log: -rwxr-xr-x. 1 atlas atlas    503499 Feb 10 11:16 input.tar.gz
2025-02-10 09:24:18 (12020): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Feb 10 11:16 start_atlas.sh
2025-02-10 09:24:18 (12020): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb 10 11:16 EVNT.43092741._000230.pool.root.1 -> /data/./ATLAS.root_0
2025-02-10 09:24:18 (12020): Guest Log: -rw-r--r--. 1 atlas atlas      2526 Feb 10 11:16 pandaJob.out
2025-02-10 09:24:18 (12020): Guest Log: -rw-------. 1 atlas atlas       424 Feb 10 11:16 setup.sh.local
2025-02-10 09:24:18 (12020): Guest Log: -rw-------. 1 atlas atlas    983565 Feb 10 11:17 agis_schedconf.cvmfs.json
2025-02-10 09:24:18 (12020): Guest Log: drwx------. 4 atlas atlas      4096 Feb 10 11:18 pilot3
2025-02-10 09:24:18 (12020): Guest Log: -rw-------. 1 atlas atlas 309080029 Feb 10 16:22 HITS.43197887._014938.pool.root.1
2025-02-10 09:24:18 (12020): Guest Log: -rw-------. 1 atlas atlas        95 Feb 10 16:23 pilot_heartbeat.json
2025-02-10 09:24:18 (12020): Guest Log: -rw-------. 1 atlas atlas      1031 Feb 10 16:23 memory_monitor_summary.json
2025-02-10 09:24:18 (12020): Guest Log: -rw-------. 1 atlas atlas   1587792 Feb 10 16:23 agis_ddmendpoints.agis.ALL.json
2025-02-10 09:24:18 (12020): Guest Log: -rw-------. 1 atlas atlas    377421 Feb 10 16:23 log.43197887._014938.job.log.tgz.1
2025-02-10 09:24:18 (12020): Guest Log: -rw-------. 1 atlas atlas      7751 Feb 10 16:24 heartbeat.json
2025-02-10 09:24:18 (12020): Guest Log: -rw-------. 1 atlas atlas      4398 Feb 10 16:24 pilotlog.txt
2025-02-10 09:24:18 (12020): Guest Log: -rw-------. 1 atlas atlas   1079201 Feb 10 16:24 log.43197887._014938.job.log.1
2025-02-10 09:24:18 (12020): Guest Log: -rw-------. 1 atlas atlas       357 Feb 10 16:24 output.list
2025-02-10 09:24:18 (12020): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb 10 16:24 runtime_log
2025-02-10 09:24:18 (12020): Guest Log: -rw-------. 1 atlas atlas   1474560 Feb 10 16:24 result.tar.gz
2025-02-10 09:24:18 (12020): Guest Log: -rw-r--r--. 1 atlas atlas     10966 Feb 10 16:24 runtime_log.err
2025-02-10 09:24:18 (12020): Guest Log: -rw-------. 1 atlas atlas       669 Feb 10 16:24 CKZMDmOXK16n9Rq4apOajLDm4fhM0noT9bVoFjIUDm41MKDmKRpcEm.diag
2025-02-10 09:24:18 (12020): Guest Log: Looking for outputfile HITS.43197887._014938.pool.root.1
2025-02-10 09:24:18 (12020): Guest Log: HITS file was successfully produced
2025-02-10 09:24:18 (12020): Guest Log: -rw-------. 1 atlas atlas 309080029 Feb 10 16:22 /home/atlas/RunAtlas/HITS.43197887._014938.pool.root.1
2025-02-10 09:24:22 (12020): Guest Log: Successfully finished the ATLAS job!
2025-02-10 09:24:22 (12020): Guest Log: Copying the results back to the shared directory!
2025-02-10 09:24:22 (12020): Guest Log:  *** Contents of shared directory: ***
2025-02-10 09:24:22 (12020): Guest Log: total 629852
2025-02-10 09:24:22 (12020): Guest Log: -rwxrwxrwx. 1 root root 333874121 Feb 10 11:15 ATLAS.root_0
2025-02-10 09:24:22 (12020): Guest Log: -rwxrwxrwx. 1 root root 309080029 Feb 10 16:24 HITS.pool.root.1
2025-02-10 09:24:22 (12020): Guest Log: -rwxrwxrwx. 1 root root     12260 Feb 10 11:15 init_data.xml
2025-02-10 09:24:22 (12020): Guest Log: -rwxrwxrwx. 1 root root    503499 Feb  9 13:25 input.tar.gz
2025-02-10 09:24:22 (12020): Guest Log: -rwxrwxrwx. 1 root root   1474560 Feb 10 16:24 result.tar.gz
2025-02-10 09:24:22 (12020): Guest Log: -rwxrwxrwx. 1 root root     17569 Feb  9 13:25 start_atlas.sh
2025-02-10 09:24:22 (12020): Guest Log:  *** Success! Shutting down the machine. ***
2025-02-10 09:24:22 (12020): VM Completion File Detected.
2025-02-10 09:24:22 (12020): Powering off VM.
2025-02-10 09:24:23 (12020): Successfully stopped VM.
2025-02-10 09:24:23 (12020): Deregistering VM. (boinc_60667197b7097da0, slot#3)
2025-02-10 09:24:23 (12020): Removing network bandwidth throttle group from VM.
2025-02-10 09:24:24 (12020): Removing VM from VirtualBox.
09:24:29 (12020): called boinc_finish(0)

</stderr_txt>
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