Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-02-09 20:13:46 (7948): Detected: vboxwrapper 26206
2025-02-09 20:13:46 (7948): Detected: BOINC client v8.0.2
2025-02-09 20:13:46 (7948): Detected: VirtualBox VboxManage Interface (Version: 7.0.8)
2025-02-09 20:13:47 (7948): Successfully copied 'init_data.xml' to the shared directory.
2025-02-09 20:13:47 (7948): Create VM. (boinc_d5c6507146d501e6, slot#0)
2025-02-09 20:13:48 (7948): Setting Memory Size for VM. (4400MB)
2025-02-09 20:13:48 (7948): Setting CPU Count for VM. (4)
2025-02-09 20:13:48 (7948): Setting Chipset Options for VM.
2025-02-09 20:13:48 (7948): Setting Graphics Controller Options for VM.
2025-02-09 20:13:49 (7948): Setting Boot Options for VM.
2025-02-09 20:13:49 (7948): Setting Network Configuration for NAT.
2025-02-09 20:13:49 (7948): Enabling VM Network Access.
2025-02-09 20:13:49 (7948): Disabling USB Support for VM.
2025-02-09 20:13:50 (7948): Disabling COM Port Support for VM.
2025-02-09 20:13:50 (7948): Disabling LPT Port Support for VM.
2025-02-09 20:13:50 (7948): Disabling Audio Support for VM.
2025-02-09 20:13:50 (7948): Disabling Clipboard Support for VM.
2025-02-09 20:13:51 (7948): Disabling Drag and Drop Support for VM.
2025-02-09 20:13:51 (7948): Adding storage controller(s) to VM.
2025-02-09 20:13:51 (7948): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-02-09 20:13:54 (7948): Adding VirtualBox Guest Additions to VM.
2025-02-09 20:13:54 (7948): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-02-09 20:13:55 (7948): forwarding host port 57819 to guest port 80
2025-02-09 20:13:55 (7948): Enabling remote desktop for VM.
2025-02-09 20:13:55 (7948): Enabling shared directory for VM.
2025-02-09 20:13:56 (7948): Starting VM using VBoxManage interface. (boinc_d5c6507146d501e6, slot#0)
2025-02-09 20:14:03 (7948): Successfully started VM. (PID = '1508')
2025-02-09 20:14:03 (7948): Reporting VM Process ID to BOINC.
2025-02-09 20:14:03 (7948): Guest Log: BIOS: VirtualBox 7.0.8
2025-02-09 20:14:03 (7948): Guest Log: CPUID EDX: 0x178bfbff
2025-02-09 20:14:03 (7948): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-02-09 20:14:03 (7948): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-02-09 20:14:03 (7948): VM state change detected. (old = 'poweredoff', new = 'running')
2025-02-09 20:14:03 (7948): Detected: Web Application Enabled (http://localhost:57819)
2025-02-09 20:14:03 (7948): Detected: Remote Desktop Enabled (localhost:57820)
2025-02-09 20:14:03 (7948): Preference change detected
2025-02-09 20:14:03 (7948): Setting CPU throttle for VM. (65%)
2025-02-09 20:14:04 (7948): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 500 seconds) or (Vbox_job.xml: 900 seconds))
2025-02-09 20:14:05 (7948): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-02-09 20:14:05 (7948): Guest Log: BIOS: Booting from Hard Disk...
2025-02-09 20:14:08 (7948): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-02-09 20:14:08 (7948): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-02-09 20:14:08 (7948): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-02-09 20:14:08 (7948): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-02-09 20:14:08 (7948): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-02-09 20:14:08 (7948): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-02-09 20:14:08 (7948): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-02-09 20:14:08 (7948): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-02-09 20:14:08 (7948): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-02-09 20:14:08 (7948): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-02-09 20:14:08 (7948): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-02-09 20:14:08 (7948): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-02-09 20:14:08 (7948): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-02-09 20:14:08 (7948): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-02-09 20:14:08 (7948): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-02-09 20:14:08 (7948): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-02-09 20:14:08 (7948): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-02-09 20:14:08 (7948): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-02-09 20:14:08 (7948): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-02-09 20:14:08 (7948): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-02-09 20:14:08 (7948): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-02-09 20:14:08 (7948): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-02-09 20:14:08 (7948): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-02-09 20:14:08 (7948): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-02-09 20:14:08 (7948): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-02-09 20:14:08 (7948): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-02-09 20:14:08 (7948): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-02-09 20:14:08 (7948): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-02-09 20:14:08 (7948): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-02-09 20:14:08 (7948): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-02-09 20:14:08 (7948): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-02-09 20:14:08 (7948): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-02-09 20:14:15 (7948): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-02-09 20:14:15 (7948): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-02-09 20:14:22 (7948): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-02-09 20:14:22 (7948): Guest Log: 00:00:00.000140 main     Log opened 2025-02-09T20:14:20.306161000Z
2025-02-09 20:14:22 (7948): Guest Log: 00:00:00.000219 main     OS Product: Linux
2025-02-09 20:14:22 (7948): Guest Log: 00:00:00.000247 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-02-09 20:14:22 (7948): Guest Log: 00:00:00.000270 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-02-09 20:14:22 (7948): Guest Log: 00:00:00.000292 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-02-09 20:14:22 (7948): Guest Log: 00:00:00.000293 main     Process ID: 1301
2025-02-09 20:14:22 (7948): Guest Log: 00:00:00.000293 main     Package type: LINUX_64BITS_GENERIC
2025-02-09 20:14:22 (7948): Guest Log: 00:00:00.002375 main     5.2.32 r132073 started. Verbose level = 0
2025-02-09 20:14:22 (7948): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-02-09 20:14:22 (7948): Guest Log: [INFO] Mounting shared directory
2025-02-09 20:14:22 (7948): Guest Log: [INFO] Checking for init_data.xml
2025-02-09 20:14:24 (7948): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-02-09 20:14:24 (7948): Guest Log: [INFO] Detected branch: prod
2025-02-09 20:14:24 (7948): Guest Log: This is the prod version of the ATLAS job wrapper
2025-02-09 20:14:24 (7948): Guest Log: Copying input files
2025-02-09 20:14:27 (7948): Guest Log: Copied input files into RunAtlas.
2025-02-09 20:14:27 (7948): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-02-09 20:14:27 (7948): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-02-09 20:14:27 (7948): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-02-09 20:14:27 (7948): Guest Log: Further information can be found at the LHC@home message board.
2025-02-09 20:14:31 (7948): Guest Log: 00:00:10.057881 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 497 969 000ns (GuestNow=1 739 128 471 812 451 000 ns GuestLast=1 739 132 060 310 420 000 ns fSetTimeLastLoop=true )
2025-02-09 20:14:39 (7948): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-02-09 20:14:40 (7948): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-02-09 20:14:40 (7948): Guest Log: 2.6.3.0 1577 0 32172 142458 4 1 3117296 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-02-09 20:14:42 (7948): Guest Log: copied the webapp to /var/www
2025-02-09 20:14:42 (7948): Guest Log: ATHENA_PROC_NUMBER=4
2025-02-09 20:14:42 (7948): Guest Log: ATHENA_CORE_NUMBER=4
2025-02-09 20:14:42 (7948): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-02-09 20:14:42 (7948): Guest Log:  *** Starting ATLAS job. (PandaID=6508255816 taskID=43205075) ***
2025-02-09 21:54:07 (7948): Status Report: Elapsed Time: '6000.000000'
2025-02-09 21:54:07 (7948): Status Report: CPU Time: '14813.453125'
2025-02-09 22:48:29 (7948): Preference change detected
2025-02-09 22:48:29 (7948): Setting CPU throttle for VM. (65%)
2025-02-09 22:48:29 (7948): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 500 seconds) or (Vbox_job.xml: 900 seconds))
2025-02-09 23:34:10 (7948): Status Report: Elapsed Time: '12000.000000'
2025-02-09 23:34:10 (7948): Status Report: CPU Time: '32826.859375'
2025-02-10 01:14:13 (7948): Status Report: Elapsed Time: '18000.000000'
2025-02-10 01:14:13 (7948): Status Report: CPU Time: '50837.593750'
2025-02-10 02:54:15 (7948): Status Report: Elapsed Time: '24000.000000'
2025-02-10 02:54:15 (7948): Status Report: CPU Time: '68848.937500'
2025-02-10 04:34:18 (7948): Status Report: Elapsed Time: '30000.000000'
2025-02-10 04:34:18 (7948): Status Report: CPU Time: '86857.500000'
2025-02-10 04:54:45 (7948): Guest Log:  *** Job finished ***
2025-02-10 04:54:45 (7948): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-02-10 04:54:45 (7948): Guest Log: 2025-02-10 03:54:33,109 | INFO     | [data] queue_monitor thread has finished
2025-02-10 04:54:45 (7948): Guest Log: 2025-02-10 03:54:37,188 | INFO     | job.realtimelogging is not enabled
2025-02-10 04:54:45 (7948): Guest Log: 2025-02-10 03:54:38,190 | INFO     | [payload] run_realtimelog thread has finished
2025-02-10 04:54:45 (7948): Guest Log: 2025-02-10 03:54:38,667 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140716201027392)>', '<ExcThread(monitor, started 140715367573248)>']
2025-02-10 04:54:45 (7948): Guest Log: 2025-02-10 03:54:39,410 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-02-10 04:54:45 (7948): Guest Log: 2025-02-10 03:54:39,410 | INFO     | [monitor] control thread has ended
2025-02-10 04:54:45 (7948): Guest Log: 2025-02-10 03:54:43,673 | INFO     | all workflow threads have been joined
2025-02-10 04:54:45 (7948): Guest Log: 2025-02-10 03:54:43,673 | INFO     | end of generic workflow (traces error code: 0)
2025-02-10 04:54:45 (7948): Guest Log: 2025-02-10 03:54:43,673 | INFO     | traces error code: 0
2025-02-10 04:54:45 (7948): Guest Log: 2025-02-10 03:54:43,673 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-02-10 04:54:45 (7948): Guest Log: 2025-02-10 03:54:43,751 [wrapper] ==== pilot stdout END ====
2025-02-10 04:54:45 (7948): Guest Log: 2025-02-10 03:54:43,755 [wrapper] ==== wrapper stdout RESUME ====
2025-02-10 04:54:45 (7948): Guest Log: 2025-02-10 03:54:43,758 [wrapper] pilotpid: 5928
2025-02-10 04:54:45 (7948): Guest Log: 2025-02-10 03:54:43,762 [wrapper] Pilot exit status: 0
2025-02-10 04:54:45 (7948): Guest Log: 2025-02-10 03:54:43,835 [wrapper] pandaids: 6508255816
2025-02-10 04:54:45 (7948): Guest Log: 2025-02-10 03:54:43,859 [wrapper] cleanup supervisor_pilot  5476 5929
2025-02-10 04:54:45 (7948): Guest Log: 2025-02-10 03:54:43,863 [wrapper] Test setup, not cleaning
2025-02-10 04:54:45 (7948): Guest Log: 2025-02-10 03:54:43,874 [wrapper] apfmon messages muted
2025-02-10 04:54:45 (7948): Guest Log: 2025-02-10 03:54:43,878 [wrapper] ==== wrapper stdout END ====
2025-02-10 04:54:45 (7948): Guest Log: 2025-02-10 03:54:43,881 [wrapper] ==== wrapper stderr END ====
2025-02-10 04:54:45 (7948): Guest Log:  *** Error codes and diagnostics ***
2025-02-10 04:54:45 (7948): Guest Log:     "exeErrorCode": 0,
2025-02-10 04:54:45 (7948): Guest Log:     "exeErrorDiag": "",
2025-02-10 04:54:45 (7948): Guest Log:     "pilotErrorCode": 0,
2025-02-10 04:54:45 (7948): Guest Log:     "pilotErrorDiag": "",
2025-02-10 04:54:45 (7948): Guest Log:  *** Listing of results directory ***
2025-02-10 04:54:45 (7948): Guest Log: total 327896
2025-02-10 04:54:45 (7948): Guest Log: -rw-r--r--. 1 atlas atlas      5117 Feb  8 18:15 queuedata.json
2025-02-10 04:54:45 (7948): Guest Log: -rw-r--r--. 1 atlas atlas    491065 Feb  8 18:15 pilot3.tar.gz
2025-02-10 04:54:45 (7948): Guest Log: -rwx------. 1 atlas atlas     34924 Feb  8 18:16 runpilot2-wrapper.sh
2025-02-10 04:54:45 (7948): Guest Log: -rwxr-xr-x. 1 atlas atlas      9196 Feb  9 19:14 init_data.xml
2025-02-10 04:54:45 (7948): Guest Log: -rwxr-xr-x. 1 atlas atlas    503494 Feb  9 19:14 input.tar.gz
2025-02-10 04:54:45 (7948): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Feb  9 19:14 start_atlas.sh
2025-02-10 04:54:45 (7948): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb  9 19:14 EVNT.43092757._000142.pool.root.1 -> /data/./ATLAS.root_0
2025-02-10 04:54:45 (7948): Guest Log: -rw-r--r--. 1 atlas atlas      2551 Feb  9 19:14 pandaJob.out
2025-02-10 04:54:45 (7948): Guest Log: -rw-------. 1 atlas atlas       424 Feb  9 19:14 setup.sh.local
2025-02-10 04:54:45 (7948): Guest Log: -rw-------. 1 atlas atlas    983541 Feb  9 19:15 agis_schedconf.cvmfs.json
2025-02-10 04:54:45 (7948): Guest Log: drwx------. 4 atlas atlas      4096 Feb  9 19:15 pilot3
2025-02-10 04:54:45 (7948): Guest Log: -rw-------. 1 atlas atlas 325549491 Feb 10 03:53 HITS.43205075._003528.pool.root.1
2025-02-10 04:54:45 (7948): Guest Log: -rw-------. 1 atlas atlas        95 Feb 10 03:53 pilot_heartbeat.json
2025-02-10 04:54:45 (7948): Guest Log: -rw-------. 1 atlas atlas      1033 Feb 10 03:54 memory_monitor_summary.json
2025-02-10 04:54:45 (7948): Guest Log: -rw-------. 1 atlas atlas   1587792 Feb 10 03:54 agis_ddmendpoints.agis.ALL.json
2025-02-10 04:54:45 (7948): Guest Log: -rw-------. 1 atlas atlas    458559 Feb 10 03:54 log.43205075._003528.job.log.tgz.1
2025-02-10 04:54:45 (7948): Guest Log: -rw-------. 1 atlas atlas      7748 Feb 10 03:54 heartbeat.json
2025-02-10 04:54:45 (7948): Guest Log: -rw-------. 1 atlas atlas      4347 Feb 10 03:54 pilotlog.txt
2025-02-10 04:54:45 (7948): Guest Log: -rw-------. 1 atlas atlas   2781338 Feb 10 03:54 log.43205075._003528.job.log.1
2025-02-10 04:54:45 (7948): Guest Log: -rw-------. 1 atlas atlas       357 Feb 10 03:54 output.list
2025-02-10 04:54:45 (7948): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb 10 03:54 runtime_log
2025-02-10 04:54:45 (7948): Guest Log: -rw-------. 1 atlas atlas   3256320 Feb 10 03:54 result.tar.gz
2025-02-10 04:54:45 (7948): Guest Log: -rw-------. 1 atlas atlas       665 Feb 10 03:54 XPKMDmaY406nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmn5OKDmYwpG2m.diag
2025-02-10 04:54:45 (7948): Guest Log: -rw-r--r--. 1 atlas atlas     10957 Feb 10 03:54 runtime_log.err
2025-02-10 04:54:45 (7948): Guest Log: Looking for outputfile HITS.43205075._003528.pool.root.1
2025-02-10 04:54:45 (7948): Guest Log: HITS file was successfully produced
2025-02-10 04:54:45 (7948): Guest Log: -rw-------. 1 atlas atlas 325549491 Feb 10 03:53 /home/atlas/RunAtlas/HITS.43205075._003528.pool.root.1
2025-02-10 04:54:47 (7948): Guest Log: Successfully finished the ATLAS job!
2025-02-10 04:54:47 (7948): Guest Log: Copying the results back to the shared directory!
2025-02-10 04:54:47 (7948): Guest Log:  *** Contents of shared directory: ***
2025-02-10 04:54:47 (7948): Guest Log: total 656744
2025-02-10 04:54:47 (7948): Guest Log: -rwxrwxrwx. 1 root root 343161658 Feb  9 19:13 ATLAS.root_0
2025-02-10 04:54:47 (7948): Guest Log: -rwxrwxrwx. 1 root root 325549491 Feb 10 03:54 HITS.pool.root.1
2025-02-10 04:54:47 (7948): Guest Log: -rwxrwxrwx. 1 root root      9196 Feb  9 19:13 init_data.xml
2025-02-10 04:54:47 (7948): Guest Log: -rwxrwxrwx. 1 root root    503494 Feb  8 20:26 input.tar.gz
2025-02-10 04:54:47 (7948): Guest Log: -rwxrwxrwx. 1 root root   3256320 Feb 10 03:54 result.tar.gz
2025-02-10 04:54:47 (7948): Guest Log: -rwxrwxrwx. 1 root root     17569 Feb  8 20:26 start_atlas.sh
2025-02-10 04:54:47 (7948): Guest Log:  *** Success! Shutting down the machine. ***
2025-02-10 04:54:47 (7948): VM Completion File Detected.
2025-02-10 04:54:47 (7948): Powering off VM.
2025-02-10 04:54:47 (7948): Successfully stopped VM.
2025-02-10 04:54:47 (7948): Deregistering VM. (boinc_d5c6507146d501e6, slot#0)
2025-02-10 04:54:47 (7948): Removing network bandwidth throttle group from VM.
2025-02-10 04:54:48 (7948): Removing VM from VirtualBox.
04:54:53 (7948): called boinc_finish(0)

</stderr_txt>
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