Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-02-09 16:05:39 (22344): Detected: vboxwrapper 26206
2025-02-09 16:05:39 (22344): Detected: BOINC client v8.0.2
2025-02-09 16:05:39 (22344): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-02-09 16:05:40 (22344): Successfully copied 'init_data.xml' to the shared directory.
2025-02-09 16:05:40 (22344): Create VM. (boinc_4ae4310550a12fbd, slot#2)
2025-02-09 16:05:41 (22344): Setting Memory Size for VM. (4800MB)
2025-02-09 16:05:41 (22344): Setting CPU Count for VM. (8)
2025-02-09 16:05:41 (22344): Setting Chipset Options for VM.
2025-02-09 16:05:42 (22344): Setting Graphics Controller Options for VM.
2025-02-09 16:05:42 (22344): Setting Boot Options for VM.
2025-02-09 16:05:42 (22344): Setting Network Configuration for NAT.
2025-02-09 16:05:42 (22344): Enabling VM Network Access.
2025-02-09 16:05:43 (22344): Disabling USB Support for VM.
2025-02-09 16:05:43 (22344): Disabling COM Port Support for VM.
2025-02-09 16:05:43 (22344): Disabling LPT Port Support for VM.
2025-02-09 16:05:44 (22344): Disabling Audio Support for VM.
2025-02-09 16:05:44 (22344): Disabling Clipboard Support for VM.
2025-02-09 16:05:44 (22344): Disabling Drag and Drop Support for VM.
2025-02-09 16:05:44 (22344): Adding storage controller(s) to VM.
2025-02-09 16:05:45 (22344): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-02-09 16:05:45 (22344): Adding VirtualBox Guest Additions to VM.
2025-02-09 16:05:46 (22344): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-02-09 16:05:46 (22344): forwarding host port 58957 to guest port 80
2025-02-09 16:05:46 (22344): Enabling remote desktop for VM.
2025-02-09 16:05:46 (22344): Required extension pack not installed, remote desktop not enabled.
2025-02-09 16:05:46 (22344): Enabling shared directory for VM.
2025-02-09 16:05:47 (22344): Starting VM using VBoxManage interface. (boinc_4ae4310550a12fbd, slot#2)
2025-02-09 16:05:51 (22344): Successfully started VM. (PID = '15620')
2025-02-09 16:05:51 (22344): Reporting VM Process ID to BOINC.
2025-02-09 16:05:51 (22344): Guest Log: BIOS: VirtualBox 7.0.6
2025-02-09 16:05:51 (22344): Guest Log: CPUID EDX: 0x178bfbff
2025-02-09 16:05:51 (22344): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-02-09 16:05:51 (22344): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-02-09 16:05:51 (22344): VM state change detected. (old = 'poweredoff', new = 'running')
2025-02-09 16:05:51 (22344): Detected: Web Application Enabled (http://localhost:58957)
2025-02-09 16:05:51 (22344): Preference change detected
2025-02-09 16:05:51 (22344): Setting CPU throttle for VM. (50%)
2025-02-09 16:05:52 (22344): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-02-09 16:05:53 (22344): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-02-09 16:05:53 (22344): Guest Log: BIOS: Booting from Hard Disk...
2025-02-09 16:05:57 (22344): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-02-09 16:05:57 (22344): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-02-09 16:05:57 (22344): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-02-09 16:05:57 (22344): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-02-09 16:05:57 (22344): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-02-09 16:05:57 (22344): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-02-09 16:05:57 (22344): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-02-09 16:05:57 (22344): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-02-09 16:05:57 (22344): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-02-09 16:05:57 (22344): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-02-09 16:05:57 (22344): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-02-09 16:05:57 (22344): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-02-09 16:05:57 (22344): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-02-09 16:05:57 (22344): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-02-09 16:05:57 (22344): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-02-09 16:05:57 (22344): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-02-09 16:05:57 (22344): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-02-09 16:05:57 (22344): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-02-09 16:05:57 (22344): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-02-09 16:05:57 (22344): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-02-09 16:05:57 (22344): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-02-09 16:05:57 (22344): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-02-09 16:05:57 (22344): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-02-09 16:05:57 (22344): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-02-09 16:05:57 (22344): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-02-09 16:05:57 (22344): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-02-09 16:05:57 (22344): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-02-09 16:05:57 (22344): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-02-09 16:05:57 (22344): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-02-09 16:05:57 (22344): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-02-09 16:05:57 (22344): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-02-09 16:05:57 (22344): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-02-09 16:06:07 (22344): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-02-09 16:06:07 (22344): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-02-09 16:06:20 (22344): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-02-09 16:06:20 (22344): Guest Log: 00:00:00.000121 main     Log opened 2025-02-09T16:06:17.927326000Z
2025-02-09 16:06:20 (22344): Guest Log: 00:00:00.000226 main     OS Product: Linux
2025-02-09 16:06:20 (22344): Guest Log: 00:00:00.000264 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-02-09 16:06:20 (22344): Guest Log: 00:00:00.000295 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-02-09 16:06:20 (22344): Guest Log: 00:00:00.000326 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-02-09 16:06:20 (22344): Guest Log: 00:00:00.000327 main     Process ID: 1367
2025-02-09 16:06:20 (22344): Guest Log: 00:00:00.000327 main     Package type: LINUX_64BITS_GENERIC
2025-02-09 16:06:20 (22344): Guest Log: 00:00:00.000966 main     5.2.32 r132073 started. Verbose level = 0
2025-02-09 16:06:20 (22344): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-02-09 16:06:20 (22344): Guest Log: [INFO] Mounting shared directory
2025-02-09 16:06:21 (22344): Guest Log: [INFO] Checking for init_data.xml
2025-02-09 16:06:28 (22344): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-02-09 16:06:28 (22344): Guest Log: [INFO] Detected branch: prod
2025-02-09 16:06:29 (22344): Guest Log: This is the prod version of the ATLAS job wrapper
2025-02-09 16:06:29 (22344): Guest Log: Copying input files
2025-02-09 16:06:30 (22344): Guest Log: 00:00:10.026875 timesync vgsvcTimeSyncWorker: Radical guest time change: 25 211 873 103 000ns (GuestNow=1 739 142 389 824 076 000 ns GuestLast=1 739 117 177 950 973 000 ns fSetTimeLastLoop=true )
2025-02-09 16:06:31 (22344): Guest Log: Copied input files into RunAtlas.
2025-02-09 16:06:31 (22344): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-02-09 16:06:31 (22344): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-02-09 16:06:31 (22344): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-02-09 16:06:31 (22344): Guest Log: Further information can be found at the LHC@home message board.
2025-02-09 16:06:40 (22344): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-02-09 16:06:41 (22344): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-02-09 16:06:41 (22344): Guest Log: 2.6.3.0 1648 0 30128 142462 3 1 3117296 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-02-09 16:06:42 (22344): Guest Log: copied the webapp to /var/www
2025-02-09 16:06:42 (22344): Guest Log: ATHENA_PROC_NUMBER=8
2025-02-09 16:06:42 (22344): Guest Log: ATHENA_CORE_NUMBER=8
2025-02-09 16:06:42 (22344): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-02-09 16:06:42 (22344): Guest Log:  *** Starting ATLAS job. (PandaID=6508204050 taskID=43205094) ***
2025-02-09 16:23:20 (22344): VM state change detected. (old = 'running', new = 'paused')
2025-02-09 16:26:49 (22344): VM state change detected. (old = 'paused', new = 'running')
2025-02-09 17:49:26 (22344): Status Report: Elapsed Time: '6000.000000'
2025-02-09 17:49:26 (22344): Status Report: CPU Time: '15304.796875'
2025-02-09 19:29:30 (22344): Status Report: Elapsed Time: '12000.000000'
2025-02-09 19:29:30 (22344): Status Report: CPU Time: '35194.656250'
2025-02-09 21:09:34 (22344): Status Report: Elapsed Time: '18000.000000'
2025-02-09 21:09:34 (22344): Status Report: CPU Time: '55039.515625'
2025-02-09 22:20:24 (22344): Guest Log:  *** Job finished ***
2025-02-09 22:20:24 (22344): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-02-09 22:20:24 (22344): Guest Log: 2025-02-10 05:16:57,594 | INFO     | [job] create_data_payload thread has finished
2025-02-09 22:20:24 (22344): Guest Log: 2025-02-10 05:16:57,683 | INFO     | [payload] validate_post thread has finished
2025-02-09 22:20:24 (22344): Guest Log: 2025-02-10 05:16:59,254 | INFO     | [data] queue_monitor thread has finished
2025-02-09 22:20:24 (22344): Guest Log: 2025-02-10 05:16:59,600 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140228120082240)>', '<ExcThread(monitor, started 140227385485056)>']
2025-02-09 22:20:24 (22344): Guest Log: 2025-02-10 05:17:00,098 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-02-09 22:20:24 (22344): Guest Log: 2025-02-10 05:17:00,098 | INFO     | [monitor] control thread has ended
2025-02-09 22:20:24 (22344): Guest Log: 2025-02-10 05:17:04,612 | INFO     | all workflow threads have been joined
2025-02-09 22:20:24 (22344): Guest Log: 2025-02-10 05:17:04,613 | INFO     | end of generic workflow (traces error code: 0)
2025-02-09 22:20:24 (22344): Guest Log: 2025-02-10 05:17:04,613 | INFO     | traces error code: 0
2025-02-09 22:20:24 (22344): Guest Log: 2025-02-10 05:17:04,613 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-02-09 22:20:24 (22344): Guest Log: 2025-02-10 05:17:04,680 [wrapper] ==== pilot stdout END ====
2025-02-09 22:20:24 (22344): Guest Log: 2025-02-10 05:17:04,690 [wrapper] ==== wrapper stdout RESUME ====
2025-02-09 22:20:24 (22344): Guest Log: 2025-02-10 05:17:04,702 [wrapper] pilotpid: 6038
2025-02-09 22:20:24 (22344): Guest Log: 2025-02-10 05:17:04,709 [wrapper] Pilot exit status: 0
2025-02-09 22:20:24 (22344): Guest Log: 2025-02-10 05:17:04,982 [wrapper] pandaids: 6508204050
2025-02-09 22:20:24 (22344): Guest Log: 2025-02-10 05:17:05,045 [wrapper] cleanup supervisor_pilot 21753 6039
2025-02-09 22:20:24 (22344): Guest Log: 2025-02-10 05:17:05,051 [wrapper] Test setup, not cleaning
2025-02-09 22:20:24 (22344): Guest Log: 2025-02-10 05:17:05,062 [wrapper] apfmon messages muted
2025-02-09 22:20:24 (22344): Guest Log: 2025-02-10 05:17:05,068 [wrapper] ==== wrapper stdout END ====
2025-02-09 22:20:24 (22344): Guest Log: 2025-02-10 05:17:05,084 [wrapper] ==== wrapper stderr END ====
2025-02-09 22:20:24 (22344): Guest Log:  *** Error codes and diagnostics ***
2025-02-09 22:20:24 (22344): Guest Log:     "exeErrorCode": 0,
2025-02-09 22:20:24 (22344): Guest Log:     "exeErrorDiag": "",
2025-02-09 22:20:24 (22344): Guest Log:     "pilotErrorCode": 0,
2025-02-09 22:20:24 (22344): Guest Log:     "pilotErrorDiag": "",
2025-02-09 22:20:24 (22344): Guest Log:  *** Listing of results directory ***
2025-02-09 22:20:24 (22344): Guest Log: total 324340
2025-02-09 22:20:24 (22344): Guest Log: -rw-r--r--. 1 atlas atlas    491065 Feb  8 13:52 pilot3.tar.gz
2025-02-09 22:20:24 (22344): Guest Log: -rwx------. 1 atlas atlas     34924 Feb  8 13:58 runpilot2-wrapper.sh
2025-02-09 22:20:24 (22344): Guest Log: -rw-r--r--. 1 atlas atlas      5117 Feb  8 13:58 queuedata.json
2025-02-09 22:20:24 (22344): Guest Log: -rwxr-xr-x. 1 atlas atlas     12260 Feb  9 23:06 init_data.xml
2025-02-09 22:20:24 (22344): Guest Log: -rwxr-xr-x. 1 atlas atlas    503488 Feb  9 23:06 input.tar.gz
2025-02-09 22:20:24 (22344): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Feb  9 23:06 start_atlas.sh
2025-02-09 22:20:24 (22344): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb  9 23:06 EVNT.43092757._001240.pool.root.1 -> /data/./ATLAS.root_0
2025-02-09 22:20:24 (22344): Guest Log: -rw-r--r--. 1 atlas atlas      2543 Feb  9 23:06 pandaJob.out
2025-02-09 22:20:24 (22344): Guest Log: -rw-------. 1 atlas atlas       424 Feb  9 23:06 setup.sh.local
2025-02-09 22:20:24 (22344): Guest Log: -rw-------. 1 atlas atlas    983565 Feb  9 23:08 agis_schedconf.cvmfs.json
2025-02-09 22:20:24 (22344): Guest Log: drwx------. 4 atlas atlas      4096 Feb  9 23:08 pilot3
2025-02-09 22:20:24 (22344): Guest Log: -rw-------. 1 atlas atlas 324774622 Feb 10 05:15 HITS.43205094._000976.pool.root.1
2025-02-09 22:20:24 (22344): Guest Log: -rw-------. 1 atlas atlas      1029 Feb 10 05:16 memory_monitor_summary.json
2025-02-09 22:20:24 (22344): Guest Log: -rw-------. 1 atlas atlas   1587792 Feb 10 05:16 agis_ddmendpoints.agis.ALL.json
2025-02-09 22:20:24 (22344): Guest Log: -rw-------. 1 atlas atlas    398363 Feb 10 05:16 log.43205094._000976.job.log.tgz.1
2025-02-09 22:20:24 (22344): Guest Log: -rw-------. 1 atlas atlas        95 Feb 10 05:16 pilot_heartbeat.json
2025-02-09 22:20:24 (22344): Guest Log: -rw-------. 1 atlas atlas      7734 Feb 10 05:16 heartbeat.json
2025-02-09 22:20:24 (22344): Guest Log: -rw-------. 1 atlas atlas      4275 Feb 10 05:17 pilotlog.txt
2025-02-09 22:20:24 (22344): Guest Log: -rw-------. 1 atlas atlas   1405199 Feb 10 05:17 log.43205094._000976.job.log.1
2025-02-09 22:20:24 (22344): Guest Log: -rw-------. 1 atlas atlas       357 Feb 10 05:17 output.list
2025-02-09 22:20:24 (22344): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb 10 05:17 runtime_log
2025-02-09 22:20:24 (22344): Guest Log: -rw-------. 1 atlas atlas   1822720 Feb 10 05:17 result.tar.gz
2025-02-09 22:20:24 (22344): Guest Log: -rw-r--r--. 1 atlas atlas     10966 Feb 10 05:17 runtime_log.err
2025-02-09 22:20:24 (22344): Guest Log: -rw-------. 1 atlas atlas       669 Feb 10 05:17 2BCNDmCX006n9Rq4apOajLDm4fhM0noT9bVoFjIUDmFKLKDmJu7tWn.diag
2025-02-09 22:20:24 (22344): Guest Log: Looking for outputfile HITS.43205094._000976.pool.root.1
2025-02-09 22:20:24 (22344): Guest Log: HITS file was successfully produced
2025-02-09 22:20:24 (22344): Guest Log: -rw-------. 1 atlas atlas 324774622 Feb 10 05:15 /home/atlas/RunAtlas/HITS.43205094._000976.pool.root.1
2025-02-09 22:20:26 (22344): Guest Log: Successfully finished the ATLAS job!
2025-02-09 22:20:26 (22344): Guest Log: Copying the results back to the shared directory!
2025-02-09 22:20:27 (22344): Guest Log:  *** Contents of shared directory: ***
2025-02-09 22:20:27 (22344): Guest Log: total 655896
2025-02-09 22:20:27 (22344): Guest Log: -rwxrwxrwx. 1 root root 344499144 Feb  9 23:05 ATLAS.root_0
2025-02-09 22:20:27 (22344): Guest Log: -rwxrwxrwx. 1 root root 324774622 Feb 10  2025 HITS.pool.root.1
2025-02-09 22:20:27 (22344): Guest Log: -rwxrwxrwx. 1 root root     12260 Feb  9 23:05 init_data.xml
2025-02-09 22:20:27 (22344): Guest Log: -rwxrwxrwx. 1 root root    503488 Feb  8 15:47 input.tar.gz
2025-02-09 22:20:27 (22344): Guest Log: -rwxrwxrwx. 1 root root   1822720 Feb 10  2025 result.tar.gz
2025-02-09 22:20:27 (22344): Guest Log: -rwxrwxrwx. 1 root root     17569 Feb  8 15:47 start_atlas.sh
2025-02-09 22:20:27 (22344): Guest Log:  *** Success! Shutting down the machine. ***
2025-02-09 22:20:27 (22344): VM Completion File Detected.
2025-02-09 22:20:27 (22344): Powering off VM.
2025-02-09 22:20:28 (22344): Successfully stopped VM.
2025-02-09 22:20:28 (22344): Deregistering VM. (boinc_4ae4310550a12fbd, slot#2)
2025-02-09 22:20:28 (22344): Removing network bandwidth throttle group from VM.
2025-02-09 22:20:29 (22344): Removing VM from VirtualBox.
22:20:34 (22344): called boinc_finish(0)

</stderr_txt>
]]>

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