Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
19:33:20 (2324985): wrapper (7.7.26015): starting
19:33:20 (2324985): wrapper: running run_atlas (--nthreads 4)
[2025-02-09 19:33:20] Arguments: --nthreads 4
[2025-02-09 19:33:20] Threads: 4
[2025-02-09 19:33:20] Checking for CVMFS
[2025-02-09 19:33:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-09 19:33:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-09 19:33:20] Running cvmfs_config stat atlas.cern.ch
[2025-02-09 19:33:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-09 19:33:20] 2.12.6.0 1400038 1221 53984 142456 3 55 4519774 6144000 2745 130560 0 3474617 99.8121 976460 9995 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.46:3128 1
[2025-02-09 19:33:20] CVMFS is ok
[2025-02-09 19:33:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-09 19:33:20] Checking for apptainer binary...
[2025-02-09 19:33:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-09 19:33:20] Running /usr/bin/apptainer --version
[2025-02-09 19:33:20] apptainer version 1.3.6
[2025-02-09 19:33:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-09 19:33:20] Ryzen5
[2025-02-09 19:33:20] apptainer works
[2025-02-09 19:33:20] Set ATHENA_PROC_NUMBER=4
[2025-02-09 19:33:20] Set ATHENA_CORE_NUMBER=4
[2025-02-09 19:33:20] Starting ATLAS job with PandaID=6508138090
[2025-02-09 19:33:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-09 23:10:40]  *** The last 200 lines of the pilot log: ***
[2025-02-09 23:10:40] 2025-02-09 22:10:27,832 | INFO     | extracted standard info from prmon json
[2025-02-09 23:10:40] 2025-02-09 22:10:27,832 | INFO     | extracted standard memory fields from prmon json
[2025-02-09 23:10:40] 2025-02-09 22:10:27,833 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-02-09 23:10:40] 2025-02-09 22:10:27,833 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-09 23:10:40] 2025-02-09 22:10:27,833 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-09 23:10:40] 2025-02-09 22:10:27,836 | INFO     | fitting pss+swap vs Time
[2025-02-09 23:10:40] 2025-02-09 22:10:27,836 | INFO     | model: linear, x: [1739126026.0, 1739126087.0, 1739126148.0, 1739126209.0, 1739126270.0, 1739126331.0, 1739126392.0, 1739126453.0, 1739126514.0, 1739126575.0, 1739
[2025-02-09 23:10:40] 2025-02-09 22:10:27,836 | INFO     | sum of square deviations: 2996454322.0
[2025-02-09 23:10:40] 2025-02-09 22:10:27,837 | INFO     | sum of deviations: -5272289779.9999895
[2025-02-09 23:10:40] 2025-02-09 22:10:27,837 | INFO     | mean x: 1739132492.0
[2025-02-09 23:10:40] 2025-02-09 22:10:27,837 | INFO     | mean y: 2415673.2112676054
[2025-02-09 23:10:40] 2025-02-09 22:10:27,837 | INFO     | -- intersect: 3062435776.410262
[2025-02-09 23:10:40] 2025-02-09 22:10:27,837 | INFO     | intersect: 3062435776.410262
[2025-02-09 23:10:40] 2025-02-09 22:10:27,838 | INFO     | chi2: 2.1261625134109683
[2025-02-09 23:10:40] 2025-02-09 22:10:27,838 | INFO     | model: linear, x: [1739126026.0, 1739126087.0, 1739126148.0, 1739126209.0, 1739126270.0, 1739126331.0, 1739126392.0, 1739126453.0, 1739126514.0, 1739126575.0, 1739
[2025-02-09 23:10:40] 2025-02-09 22:10:27,838 | INFO     | sum of square deviations: 2790348132.0
[2025-02-09 23:10:40] 2025-02-09 22:10:27,839 | INFO     | sum of deviations: -5173122537.499998
[2025-02-09 23:10:40] 2025-02-09 22:10:27,839 | INFO     | mean x: 1739132339.5
[2025-02-09 23:10:40] 2025-02-09 22:10:27,839 | INFO     | mean y: 2415746.6009615385
[2025-02-09 23:10:40] 2025-02-09 22:10:27,839 | INFO     | -- intersect: 3226653108.952617
[2025-02-09 23:10:40] 2025-02-09 22:10:27,839 | INFO     | intersect: 3226653108.952617
[2025-02-09 23:10:40] 2025-02-09 22:10:27,839 | INFO     | chi2: 2.1254448945827376
[2025-02-09 23:10:40] 2025-02-09 22:10:27,840 | INFO     | current chi2=2.1254448945827376 (change=0.03375183334784099 %)
[2025-02-09 23:10:40] 2025-02-09 22:10:27,840 | INFO     | right removable region: 207
[2025-02-09 23:10:40] 2025-02-09 22:10:27,840 | INFO     | model: linear, x: [1739126331.0, 1739126392.0, 1739126453.0, 1739126514.0, 1739126575.0, 1739126636.0, 1739126697.0, 1739126758.0, 1739126819.0, 1739126880.0, 1739
[2025-02-09 23:10:40] 2025-02-09 22:10:27,840 | INFO     | sum of square deviations: 2790348132.0
[2025-02-09 23:10:40] 2025-02-09 22:10:27,841 | INFO     | sum of deviations: -44778390902.0
[2025-02-09 23:10:40] 2025-02-09 22:10:27,841 | INFO     | mean x: 1739132644.5
[2025-02-09 23:10:40] 2025-02-09 22:10:27,841 | INFO     | mean y: 2444710.9903846155
[2025-02-09 23:10:40] 2025-02-09 22:10:27,841 | INFO     | -- intersect: 27911349873.312256
[2025-02-09 23:10:40] 2025-02-09 22:10:27,841 | INFO     | intersect: 27911349873.312256
[2025-02-09 23:10:40] 2025-02-09 22:10:27,841 | INFO     | chi2: 0.3116316159702745
[2025-02-09 23:10:40] 2025-02-09 22:10:27,841 | INFO     | current chi2=0.3116316159702745 (change=85.34300111093913 %)
[2025-02-09 23:10:40] 2025-02-09 22:10:27,842 | INFO     | model: linear, x: [1739126636.0, 1739126697.0, 1739126758.0, 1739126819.0, 1739126880.0, 1739126941.0, 1739127002.0, 1739127063.0, 1739127124.0, 1739127185.0, 1739
[2025-02-09 23:10:40] 2025-02-09 22:10:27,842 | INFO     | sum of square deviations: 2593916542.0
[2025-02-09 23:10:40] 2025-02-09 22:10:27,843 | INFO     | sum of deviations: -37640353536.0
[2025-02-09 23:10:40] 2025-02-09 22:10:27,843 | INFO     | mean x: 1739132797.0
[2025-02-09 23:10:40] 2025-02-09 22:10:27,843 | INFO     | mean y: 2439143.5024630544
[2025-02-09 23:10:40] 2025-02-09 22:10:27,843 | INFO     | -- intersect: 25239015673.701607
[2025-02-09 23:10:40] 2025-02-09 22:10:27,843 | INFO     | intersect: 25239015673.701607
[2025-02-09 23:10:40] 2025-02-09 22:10:27,843 | INFO     | chi2: 0.29295765620226766
[2025-02-09 23:10:40] 2025-02-09 22:10:27,843 | INFO     | current chi2=0.29295765620226766 (change=5.992318754265321 %)
[2025-02-09 23:10:40] 2025-02-09 22:10:27,843 | INFO     | left removable region: 20
[2025-02-09 23:10:40] 2025-02-09 22:10:27,843 | INFO     | model: linear, x: [1739127246.0, 1739127307.0, 1739127368.0, 1739127429.0, 1739127490.0, 1739127551.0, 1739127612.0, 1739127673.0, 1739127734.0, 1739127795.0, 1739
[2025-02-09 23:10:40] 2025-02-09 22:10:27,844 | INFO     | sum of square deviations: 2027639878.0
[2025-02-09 23:10:40] 2025-02-09 22:10:27,844 | INFO     | sum of deviations: -17904525653.999992
[2025-02-09 23:10:40] 2025-02-09 22:10:27,844 | INFO     | mean x: 1739132919.0
[2025-02-09 23:10:40] 2025-02-09 22:10:27,844 | INFO     | mean y: 2423258.8128342247
[2025-02-09 23:10:40] 2025-02-09 22:10:27,845 | INFO     | -- intersect: 15359366225.758856
[2025-02-09 23:10:40] 2025-02-09 22:10:27,845 | INFO     | intersect: 15359366225.758856
[2025-02-09 23:10:40] 2025-02-09 22:10:27,845 | INFO     | chi2: 0.19572460128183292
[2025-02-09 23:10:40] 2025-02-09 22:10:27,845 | INFO     | -- intersect: 15359366225.758856
[2025-02-09 23:10:40] 2025-02-09 22:10:27,845 | INFO     | current memory leak: -8.83 B/s (using 187 data points, chi2=0.20)
[2025-02-09 23:10:40] 2025-02-09 22:10:27,845 | INFO     | ..............................
[2025-02-09 23:10:40] 2025-02-09 22:10:27,845 | INFO     | . Timing measurements:
[2025-02-09 23:10:40] 2025-02-09 22:10:27,845 | INFO     | . get job = 0 s
[2025-02-09 23:10:40] 2025-02-09 22:10:27,845 | INFO     | . initial setup = 1 s
[2025-02-09 23:10:40] 2025-02-09 22:10:27,846 | INFO     | . payload setup = 3 s
[2025-02-09 23:10:40] 2025-02-09 22:10:27,846 | INFO     | . stage-in = 0 s
[2025-02-09 23:10:40] 2025-02-09 22:10:27,846 | INFO     | . payload execution = 12994 s
[2025-02-09 23:10:40] 2025-02-09 22:10:27,846 | INFO     | . stage-out = 0 s
[2025-02-09 23:10:40] 2025-02-09 22:10:27,846 | INFO     | . log creation = 0 s
[2025-02-09 23:10:40] 2025-02-09 22:10:27,846 | INFO     | ..............................
[2025-02-09 23:10:40] 2025-02-09 22:10:27,908 | WARNING  | process 2337295 can no longer be monitored (due to stat problems) - aborting
[2025-02-09 23:10:40] 2025-02-09 22:10:27,917 | INFO     | 
[2025-02-09 23:10:40] 2025-02-09 22:10:27,917 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6508138090/memory_monitor_summary.json (trf name=prmon)
[2025-02-09 23:10:40] 2025-02-09 22:10:27,918 | INFO     | job summary report
[2025-02-09 23:10:40] 2025-02-09 22:10:27,918 | INFO     | --------------------------------------------------
[2025-02-09 23:10:40] 2025-02-09 22:10:27,918 | INFO     | PanDA job id: 6508138090
[2025-02-09 23:10:40] 2025-02-09 22:10:27,918 | INFO     | task id: 43197887
[2025-02-09 23:10:40] 2025-02-09 22:10:27,918 | INFO     | errors: (none)
[2025-02-09 23:10:40] 2025-02-09 22:10:27,918 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-09 23:10:40] 2025-02-09 22:10:27,919 | INFO     | pilot state: finished 
[2025-02-09 23:10:40] 2025-02-09 22:10:27,922 | INFO     | transexitcode: 0
[2025-02-09 23:10:40] 2025-02-09 22:10:27,923 | INFO     | exeerrorcode: 0
[2025-02-09 23:10:40] 2025-02-09 22:10:27,923 | INFO     | exeerrordiag: 
[2025-02-09 23:10:40] 2025-02-09 22:10:27,923 | INFO     | exitcode: 0
[2025-02-09 23:10:40] 2025-02-09 22:10:27,923 | INFO     | exitmsg: OK
[2025-02-09 23:10:40] 2025-02-09 22:10:27,923 | INFO     | cpuconsumptiontime: 49969 s
[2025-02-09 23:10:40] 2025-02-09 22:10:27,923 | INFO     | nevents: 400
[2025-02-09 23:10:40] 2025-02-09 22:10:27,923 | INFO     | neventsw: 0
[2025-02-09 23:10:40] 2025-02-09 22:10:27,923 | INFO     | pid: 2337295
[2025-02-09 23:10:40] 2025-02-09 22:10:27,923 | INFO     | pgrp: 2337295
[2025-02-09 23:10:40] 2025-02-09 22:10:27,923 | INFO     | corecount: 4
[2025-02-09 23:10:40] 2025-02-09 22:10:27,923 | INFO     | event service: False
[2025-02-09 23:10:40] 2025-02-09 22:10:27,923 | INFO     | sizes: {0: 2389726, 1: 2389925, 3: 2390131, 11: 2390159, 13002: 2420118, 13003: 2429059, 13006: 2429243, 13009: 2429413}
[2025-02-09 23:10:40] 2025-02-09 22:10:27,924 | INFO     | --------------------------------------------------
[2025-02-09 23:10:40] 2025-02-09 22:10:27,924 | INFO     | 
[2025-02-09 23:10:40] 2025-02-09 22:10:27,924 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-02-09 23:10:40] 2025-02-09 22:10:27,935 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-09 23:10:40] 2025-02-09 22:10:27,935 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-09 23:10:40] 2025-02-09 22:10:27,936 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-09 23:10:40] 2025-02-09 22:10:27,936 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-09 23:10:40] 2025-02-09 22:10:27,936 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-09 23:10:40] 2025-02-09 22:10:27,936 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-09 23:10:40] 2025-02-09 22:10:27,936 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-09 23:10:40] 2025-02-09 22:10:27,936 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-09 23:10:40] 2025-02-09 22:10:27,936 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-09 23:10:40] 2025-02-09 22:10:27,936 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-09 23:10:40] 2025-02-09 22:10:27,936 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-09 23:10:40] 2025-02-09 22:10:27,936 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-09 23:10:40] 2025-02-09 22:10:27,936 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-09 23:10:40] 2025-02-09 22:10:27,936 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-09 23:10:40] 2025-02-09 22:10:27,936 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-09 23:10:40] 2025-02-09 22:10:27,936 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-09 23:10:40] 2025-02-09 22:10:27,937 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-09 23:10:40] 2025-02-09 22:10:27,937 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-09 23:10:40] 2025-02-09 22:10:27,937 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-09 23:10:40] 2025-02-09 22:10:27,937 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-09 23:10:40] 2025-02-09 22:10:27,937 | INFO     | job 6508138090 has completed (purged errors)
[2025-02-09 23:10:40] 2025-02-09 22:10:27,937 | INFO     | overall cleanup function is called
[2025-02-09 23:10:40] 2025-02-09 22:10:27,974 | INFO     | number of running child processes to parent process 2337295: 1
[2025-02-09 23:10:40] 2025-02-09 22:10:27,974 | INFO     | maximum number of monitored processes: 6
[2025-02-09 23:10:40] 2025-02-09 22:10:27,974 | INFO     | aborting job monitoring since job object (job id=6508138090) has expired
[2025-02-09 23:10:40] 2025-02-09 22:10:28,942 | INFO     | --- collectZombieJob: --- 10, [2337295]
[2025-02-09 23:10:40] 2025-02-09 22:10:28,942 | INFO     | zombie collector waiting for pid 2337295
[2025-02-09 23:10:40] 2025-02-09 22:10:28,943 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-09 23:10:40] 2025-02-09 22:10:28,943 | INFO     | collected zombie processes
[2025-02-09 23:10:40] 2025-02-09 22:10:28,943 | INFO     | will attempt to kill all subprocesses of pid=2337295
[2025-02-09 23:10:40] 2025-02-09 22:10:29,000 | INFO     | process IDs to be killed: [2337295] (in reverse order)
[2025-02-09 23:10:40] 2025-02-09 22:10:29,036 | WARNING  | found no corresponding commands to process id(s)
[2025-02-09 23:10:40] 2025-02-09 22:10:29,036 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-09 23:10:40] 2025-02-09 22:10:29,039 | INFO     | did not find any defunct processes belonging to 2337295
[2025-02-09 23:10:40] 2025-02-09 22:10:29,041 | INFO     | did not find any defunct processes belonging to 2337295
[2025-02-09 23:10:40] 2025-02-09 22:10:29,041 | INFO     | ready for new job
[2025-02-09 23:10:40] 2025-02-09 22:10:29,041 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-09 23:10:40] 2025-02-09 22:10:29,042 | INFO     | **************************************
[2025-02-09 23:10:40] 2025-02-09 22:10:29,043 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-09 23:10:40] 2025-02-09 22:10:29,043 | INFO     | **************************************
[2025-02-09 23:10:40] 2025-02-09 22:10:29,043 | INFO     | 
[2025-02-09 23:10:40] 2025-02-09 22:10:29,043 | INFO     | architecture information:
[2025-02-09 23:10:40] 2025-02-09 22:10:29,044 | INFO     | executing command: cat /etc/os-release
[2025-02-09 23:10:40] 2025-02-09 22:10:29,052 | INFO     | cat /etc/os-release:
[2025-02-09 23:10:40] NAME="CentOS Linux"
[2025-02-09 23:10:40] VERSION="7 (Core)"
[2025-02-09 23:10:40] ID="centos"
[2025-02-09 23:10:40] ID_LIKE="rhel fedora"
[2025-02-09 23:10:40] VERSION_ID="7"
[2025-02-09 23:10:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-09 23:10:40] ANSI_COLOR="0;31"
[2025-02-09 23:10:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-09 23:10:40] HOME_URL="https://www.centos.org/"
[2025-02-09 23:10:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-09 23:10:40] 
[2025-02-09 23:10:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-09 23:10:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-09 23:10:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-09 23:10:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-09 23:10:40] 
[2025-02-09 23:10:40] 2025-02-09 22:10:29,053 | INFO     | **************************************
[2025-02-09 23:10:40] 2025-02-09 22:10:29,555 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-02-09 23:10:40] 2025-02-09 22:10:29,567 | INFO     | sufficient remaining disk space (84714455040 B)
[2025-02-09 23:10:40] 2025-02-09 22:10:29,567 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-09 23:10:40] 2025-02-09 22:10:29,567 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-09 23:10:40] 2025-02-09 22:10:29,567 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-09 23:10:40] 2025-02-09 22:10:29,567 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-09 23:10:40] 2025-02-09 22:10:29,567 | INFO     | aborting loop
[2025-02-09 23:10:40] 2025-02-09 22:10:29,839 | INFO     | all payload control threads have been joined
[2025-02-09 23:10:40] 2025-02-09 22:10:29,888 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-09 23:10:40] 2025-02-09 22:10:30,096 | INFO     | all data control threads have been joined
[2025-02-09 23:10:40] 2025-02-09 22:10:30,570 | INFO     | [job] retrieve thread has finished
[2025-02-09 23:10:40] 2025-02-09 22:10:30,572 | INFO     | [job] job monitor thread has finished
[2025-02-09 23:10:40] 2025-02-09 22:10:30,573 | INFO     | [job] queue monitor thread has finished
[2025-02-09 23:10:40] 2025-02-09 22:10:30,673 | INFO     | PID=2328710 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-02-09 23:10:40] 2025-02-09 22:10:30,673 | INFO     | .. there are 4 such processes running
[2025-02-09 23:10:40] 2025-02-09 22:10:30,673 | INFO     | found 0 job(s) in 20 queues
[2025-02-09 23:10:40] 2025-02-09 22:10:30,673 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-09 23:10:40] 2025-02-09 22:10:30,673 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-09 23:10:40] 2025-02-09 22:10:30,844 | INFO     | [payload] control thread has finished
[2025-02-09 23:10:40] 2025-02-09 22:10:30,892 | INFO     | all job control threads have been joined
[2025-02-09 23:10:40] 2025-02-09 22:10:30,906 | INFO     | [payload] execute_payloads thread has finished
[2025-02-09 23:10:40] 2025-02-09 22:10:31,099 | INFO     | [data] control thread has finished
[2025-02-09 23:10:40] 2025-02-09 22:10:31,232 | INFO     | [data] copytool_in thread has finished
[2025-02-09 23:10:40] 2025-02-09 22:10:31,399 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-09 23:10:40] 2025-02-09 22:10:31,416 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-09 23:10:40] 2025-02-09 22:10:31,496 | INFO     | [job] validate thread has finished
[2025-02-09 23:10:40] 2025-02-09 22:10:31,579 | INFO     | [payload] validate_post thread has finished
[2025-02-09 23:10:40] 2025-02-09 22:10:31,661 | INFO     | [payload] failed_post thread has finished
[2025-02-09 23:10:40] 2025-02-09 22:10:31,726 | INFO     | [job] create_data_payload thread has finished
[2025-02-09 23:10:40] 2025-02-09 22:10:31,762 | INFO     | [payload] validate_pre thread has finished
[2025-02-09 23:10:40] 2025-02-09 22:10:31,892 | INFO     | [data] copytool_out thread has finished
[2025-02-09 23:10:40] 2025-02-09 22:10:31,896 | INFO     | [job] control thread has finished
[2025-02-09 23:10:40] 2025-02-09 22:10:35,419 | INFO     | [data] queue_monitor thread has finished
[2025-02-09 23:10:40] 2025-02-09 22:10:35,512 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 137263929096000)>', '<ExcThread(monitor, started 137263447004928)>']
[2025-02-09 23:10:40] 2025-02-09 22:10:35,690 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-09 23:10:40] 2025-02-09 22:10:35,690 | INFO     | [monitor] control thread has ended
[2025-02-09 23:10:40] 2025-02-09 22:10:40,536 | INFO     | all workflow threads have been joined
[2025-02-09 23:10:40] 2025-02-09 22:10:40,536 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-09 23:10:40] 2025-02-09 22:10:40,536 | INFO     | traces error code: 0
[2025-02-09 23:10:40] 2025-02-09 22:10:40,536 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-09 23:10:40] 2025-02-09 22:10:40,608 [wrapper] ==== pilot stdout END ====
[2025-02-09 23:10:40] 2025-02-09 22:10:40,610 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-09 23:10:40] 2025-02-09 22:10:40,611 [wrapper] pilotpid: 2328710
[2025-02-09 23:10:40] 2025-02-09 22:10:40,613 [wrapper] Pilot exit status: 0
[2025-02-09 23:10:40] 2025-02-09 22:10:40,619 [wrapper] pandaids: 6508138090
[2025-02-09 23:10:40] 2025-02-09 22:10:40,643 [wrapper] cleanup supervisor_pilot 2466961 2328711
[2025-02-09 23:10:40] 2025-02-09 22:10:40,645 [wrapper] Test setup, not cleaning
[2025-02-09 23:10:40] 2025-02-09 22:10:40,648 [wrapper] apfmon messages muted
[2025-02-09 23:10:40] 2025-02-09 22:10:40,650 [wrapper] ==== wrapper stdout END ====
[2025-02-09 23:10:40] 2025-02-09 22:10:40,651 [wrapper] ==== wrapper stderr END ====
[2025-02-09 23:10:40]  *** Error codes and diagnostics ***
[2025-02-09 23:10:40]     "exeErrorCode": 0,
[2025-02-09 23:10:40]     "exeErrorDiag": "",
[2025-02-09 23:10:40]     "pilotErrorCode": 0,
[2025-02-09 23:10:40]     "pilotErrorDiag": "",
[2025-02-09 23:10:40]  *** Listing of results directory ***
[2025-02-09 23:10:40] insgesamt 628368
[2025-02-09 23:10:40] -rw-r--r-- 1 boinc boinc      5117  8. Feb 09:44 queuedata.json
[2025-02-09 23:10:40] -rwx------ 1 boinc boinc     34924  8. Feb 09:45 runpilot2-wrapper.sh
[2025-02-09 23:10:40] -rw-r--r-- 1 boinc boinc    491065  8. Feb 09:45 pilot3.tar.gz
[2025-02-09 23:10:40] -rw-r--r-- 1 boinc boinc       100  9. Feb 19:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-09 23:10:40] -rwxr-xr-x 1 boinc boinc      7986  9. Feb 19:33 run_atlas
[2025-02-09 23:10:40] -rw-r--r-- 1 boinc boinc       105  9. Feb 19:33 job.xml
[2025-02-09 23:10:40] drwxrwx--x 2 boinc boinc      4096  9. Feb 19:33 shared
[2025-02-09 23:10:40] -rw-r--r-- 2 boinc boinc    503493  9. Feb 19:33 input.tar.gz
[2025-02-09 23:10:40] -rw-r--r-- 1 boinc boinc      9557  9. Feb 19:33 init_data.xml
[2025-02-09 23:10:40] -rw-r--r-- 2 boinc boinc 331012406  9. Feb 19:33 EVNT.43092741._000055.pool.root.1
[2025-02-09 23:10:40] -rw-r--r-- 2 boinc boinc     17569  9. Feb 19:33 start_atlas.sh
[2025-02-09 23:10:40] -rw-r--r-- 1 boinc boinc         0  9. Feb 19:33 boinc_lockfile
[2025-02-09 23:10:40] -rw-r--r-- 1 boinc boinc      2527  9. Feb 19:33 pandaJob.out
[2025-02-09 23:10:40] -rw------- 1 boinc boinc       461  9. Feb 19:33 setup.sh.local
[2025-02-09 23:10:40] -rw------- 1 boinc boinc    983549  9. Feb 19:33 agis_schedconf.cvmfs.json
[2025-02-09 23:10:40] drwx------ 4 boinc boinc      4096  9. Feb 19:33 pilot3
[2025-02-09 23:10:40] -rw------- 1 boinc boinc        95  9. Feb 23:09 pilot_heartbeat.json
[2025-02-09 23:10:40] -rw-r--r-- 1 boinc boinc       530  9. Feb 23:09 boinc_task_state.xml
[2025-02-09 23:10:40] -rw------- 1 boinc boinc 305302531  9. Feb 23:09 HITS.43197887._001366.pool.root.1
[2025-02-09 23:10:40] -rw-r--r-- 1 boinc boinc      8192  9. Feb 23:10 boinc_mmap_file
[2025-02-09 23:10:40] -rw-r--r-- 1 boinc boinc        28  9. Feb 23:10 wrapper_checkpoint.txt
[2025-02-09 23:10:40] -rw------- 1 boinc boinc      1024  9. Feb 23:10 memory_monitor_summary.json
[2025-02-09 23:10:40] -rw------- 1 boinc boinc   1587792  9. Feb 23:10 agis_ddmendpoints.agis.ALL.json
[2025-02-09 23:10:40] -rw------- 1 boinc boinc    332234  9. Feb 23:10 log.43197887._001366.job.log.tgz.1
[2025-02-09 23:10:40] -rw------- 1 boinc boinc      7644  9. Feb 23:10 heartbeat.json
[2025-02-09 23:10:40] -rw------- 1 boinc boinc      4609  9. Feb 23:10 pilotlog.txt
[2025-02-09 23:10:40] -rw------- 1 boinc boinc   1327640  9. Feb 23:10 log.43197887._001366.job.log.1
[2025-02-09 23:10:40] -rw------- 1 boinc boinc       357  9. Feb 23:10 output.list
[2025-02-09 23:10:40] -rw-r--r-- 1 boinc boinc       620  9. Feb 23:10 runtime_log
[2025-02-09 23:10:40] -rw------- 1 boinc boinc   1679360  9. Feb 23:10 result.tar.gz
[2025-02-09 23:10:40] -rw------- 1 boinc boinc       646  9. Feb 23:10 XTpMDmodv06n9Rq4apOajLDm4fhM0noT9bVoFjIUDmlJKKDmCw77zm.diag
[2025-02-09 23:10:40] -rw-r--r-- 1 boinc boinc     11335  9. Feb 23:10 runtime_log.err
[2025-02-09 23:10:40] -rw-r--r-- 1 boinc boinc     21405  9. Feb 23:10 stderr.txt
[2025-02-09 23:10:40] HITS file was successfully produced:
[2025-02-09 23:10:40] -rw------- 1 boinc boinc 305302531  9. Feb 23:09 shared/HITS.pool.root.1
[2025-02-09 23:10:40]  *** Contents of shared directory: ***
[2025-02-09 23:10:40] insgesamt 623564
[2025-02-09 23:10:40] -rw-r--r-- 2 boinc boinc    503493  9. Feb 19:33 input.tar.gz
[2025-02-09 23:10:40] -rw-r--r-- 2 boinc boinc 331012406  9. Feb 19:33 ATLAS.root_0
[2025-02-09 23:10:40] -rw-r--r-- 2 boinc boinc     17569  9. Feb 19:33 start_atlas.sh
[2025-02-09 23:10:40] -rw------- 1 boinc boinc 305302531  9. Feb 23:09 HITS.pool.root.1
[2025-02-09 23:10:40] -rw------- 1 boinc boinc   1679360  9. Feb 23:10 result.tar.gz
23:10:42 (2324985): run_atlas exited; CPU time 49950.835310
23:10:42 (2324985): called boinc_finish(0)

</stderr_txt>
]]>

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