Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
2025-02-02 16:46:43 (299304): Detected: vboxwrapper 26206
2025-02-02 16:46:43 (299304): Detected: BOINC client v7.24.1
2025-02-02 16:46:44 (299304): Detected: VirtualBox VboxManage Interface (Version: 7.0.16)
2025-02-02 16:46:44 (299304): Successfully copied 'init_data.xml' to the shared directory.
2025-02-02 16:46:44 (299304): Create VM. (boinc_b565b0aa54cff923, slot#0)
2025-02-02 16:46:44 (299304): Setting Memory Size for VM. (4200MB)
2025-02-02 16:46:44 (299304): Setting CPU Count for VM. (2)
2025-02-02 16:46:44 (299304): Setting Chipset Options for VM.
2025-02-02 16:46:45 (299304): Setting Graphics Controller Options for VM.
2025-02-02 16:46:45 (299304): Setting Boot Options for VM.
2025-02-02 16:46:45 (299304): Setting Network Configuration for NAT.
2025-02-02 16:46:45 (299304): Enabling VM Network Access.
2025-02-02 16:46:45 (299304): Disabling USB Support for VM.
2025-02-02 16:46:45 (299304): Disabling COM Port Support for VM.
2025-02-02 16:46:45 (299304): Disabling LPT Port Support for VM.
2025-02-02 16:46:46 (299304): Disabling Audio Support for VM.
2025-02-02 16:46:46 (299304): Disabling Clipboard Support for VM.
2025-02-02 16:46:46 (299304): Disabling Drag and Drop Support for VM.
2025-02-02 16:46:46 (299304): Adding storage controller(s) to VM.
2025-02-02 16:46:46 (299304): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-02-02 16:46:48 (299304): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-02-02 16:46:48 (299304): forwarding host port 36825 to guest port 80
2025-02-02 16:46:48 (299304): Enabling remote desktop for VM.
2025-02-02 16:46:48 (299304): Enabling shared directory for VM.
2025-02-02 16:46:49 (299304): Starting VM using VBoxManage interface. (boinc_b565b0aa54cff923, slot#0)
2025-02-02 16:46:50 (299304): Successfully started VM. (PID = '299763')
2025-02-02 16:46:50 (299304): Reporting VM Process ID to BOINC.
2025-02-02 16:46:50 (299304): Guest Log: BIOS: VirtualBox 7.0.16
2025-02-02 16:46:50 (299304): Guest Log: CPUID EDX: 0x178bfbff
2025-02-02 16:46:50 (299304): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-02-02 16:46:50 (299304): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-02-02 16:46:50 (299304): VM state change detected. (old = 'poweredoff', new = 'running')
2025-02-02 16:46:50 (299304): Detected: Web Application Enabled (http://localhost:36825)
2025-02-02 16:46:50 (299304): Detected: Remote Desktop Enabled (localhost:54853)
2025-02-02 16:46:50 (299304): Preference change detected
2025-02-02 16:46:50 (299304): Setting CPU throttle for VM. (15%)
2025-02-02 16:46:50 (299304): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 180 seconds) or (Vbox_job.xml: 900 seconds))
2025-02-02 16:46:52 (299304): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-02-02 16:46:52 (299304): Guest Log: BIOS: Booting from Hard Disk...
2025-02-02 16:47:05 (299304): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-02-02 16:47:05 (299304): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-02-02 16:47:05 (299304): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-02-02 16:47:05 (299304): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-02-02 16:47:05 (299304): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-02-02 16:47:05 (299304): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-02-02 16:47:05 (299304): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-02-02 16:47:05 (299304): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-02-02 16:47:05 (299304): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-02-02 16:47:05 (299304): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-02-02 16:47:05 (299304): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-02-02 16:47:05 (299304): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-02-02 16:47:05 (299304): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-02-02 16:47:05 (299304): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-02-02 16:47:05 (299304): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-02-02 16:47:05 (299304): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-02-02 16:47:05 (299304): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-02-02 16:47:05 (299304): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-02-02 16:47:05 (299304): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-02-02 16:47:05 (299304): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-02-02 16:47:05 (299304): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-02-02 16:47:05 (299304): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-02-02 16:47:05 (299304): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-02-02 16:47:05 (299304): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-02-02 16:47:05 (299304): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-02-02 16:47:05 (299304): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-02-02 16:47:05 (299304): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-02-02 16:47:05 (299304): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-02-02 16:47:05 (299304): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-02-02 16:47:05 (299304): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-02-02 16:47:05 (299304): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-02-02 16:47:05 (299304): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-02-02 16:47:42 (299304): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-02-02 16:47:43 (299304): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-02-02 16:49:17 (299304): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-02-02 16:49:17 (299304): Guest Log: 00:00:00.000378 main     Log opened 2025-02-03T00:49:15.597437000Z
2025-02-02 16:49:17 (299304): Guest Log: 00:00:00.000847 main     OS Product: Linux
2025-02-02 16:49:17 (299304): Guest Log: 00:00:00.000959 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-02-02 16:49:17 (299304): Guest Log: 00:00:00.001037 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-02-02 16:49:17 (299304): Guest Log: 00:00:00.001113 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-02-02 16:49:17 (299304): Guest Log: 00:00:00.001116 main     Process ID: 1279
2025-02-02 16:49:17 (299304): Guest Log: 00:00:00.001117 main     Package type: LINUX_64BITS_GENERIC
2025-02-02 16:49:17 (299304): Guest Log: 00:00:00.006481 main     5.2.32 r132073 started. Verbose level = 0
2025-02-02 16:49:19 (299304): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-02-02 16:49:19 (299304): Guest Log: [INFO] Mounting shared directory
2025-02-02 16:49:19 (299304): Guest Log: [INFO] Checking for init_data.xml
2025-02-02 16:50:42 (299304): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-02-02 16:50:42 (299304): Guest Log: [INFO] Detected branch: prod
2025-02-02 16:50:43 (299304): Guest Log: This is the prod version of the ATLAS job wrapper
2025-02-02 16:50:43 (299304): Guest Log: Copying input files
2025-02-02 16:51:15 (299304): Guest Log: Copied input files into RunAtlas.
2025-02-02 16:51:15 (299304): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-02-02 16:51:15 (299304): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-02-02 16:51:15 (299304): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-02-02 16:51:15 (299304): Guest Log: Further information can be found at the LHC@home message board.
2025-02-02 16:51:37 (299304): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-02-02 16:51:39 (299304): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-02-02 16:51:39 (299304): Guest Log: 2.6.3.0 1572 2 30064 142225 3 1 3117296 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-02-02 16:51:44 (299304): Guest Log: copied the webapp to /var/www
2025-02-02 16:51:45 (299304): Guest Log: ATHENA_PROC_NUMBER=2
2025-02-02 16:51:45 (299304): Guest Log: ATHENA_CORE_NUMBER=2
2025-02-02 16:51:46 (299304): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-02-02 16:51:46 (299304): Guest Log:  *** Starting ATLAS job. (PandaID=6496248183 taskID=43092792) ***
2025-02-02 18:25:51 (299304): Status Report: Elapsed Time: '6000.000000'
2025-02-02 18:25:51 (299304): Status Report: CPU Time: '1525.150000'
2025-02-02 20:04:52 (299304): Status Report: Elapsed Time: '12000.000000'
2025-02-02 20:04:52 (299304): Status Report: CPU Time: '3355.330000'
2025-02-02 21:43:52 (299304): Status Report: Elapsed Time: '18000.000000'
2025-02-02 21:43:52 (299304): Status Report: CPU Time: '5421.750000'
2025-02-02 23:22:53 (299304): Status Report: Elapsed Time: '24000.000000'
2025-02-02 23:22:53 (299304): Status Report: CPU Time: '7495.700000'
2025-02-03 01:01:54 (299304): Status Report: Elapsed Time: '30000.000000'
2025-02-03 01:01:54 (299304): Status Report: CPU Time: '9553.080000'
2025-02-03 02:40:55 (299304): Status Report: Elapsed Time: '36000.000000'
2025-02-03 02:40:55 (299304): Status Report: CPU Time: '11626.010000'
2025-02-03 04:19:55 (299304): Status Report: Elapsed Time: '42000.000000'
2025-02-03 04:19:55 (299304): Status Report: CPU Time: '13697.210000'
2025-02-03 05:58:56 (299304): Status Report: Elapsed Time: '48000.000000'
2025-02-03 05:58:56 (299304): Status Report: CPU Time: '15768.440000'
2025-02-03 07:37:57 (299304): Status Report: Elapsed Time: '54000.000000'
2025-02-03 07:37:57 (299304): Status Report: CPU Time: '17839.640000'
2025-02-03 09:16:58 (299304): Status Report: Elapsed Time: '60000.000000'
2025-02-03 09:16:58 (299304): Status Report: CPU Time: '19914.630000'
2025-02-03 10:55:58 (299304): Status Report: Elapsed Time: '66000.000000'
2025-02-03 10:55:58 (299304): Status Report: CPU Time: '21974.500000'
2025-02-03 12:34:59 (299304): Status Report: Elapsed Time: '72000.000000'
2025-02-03 12:34:59 (299304): Status Report: CPU Time: '24041.670000'
2025-02-03 14:14:00 (299304): Status Report: Elapsed Time: '78000.000000'
2025-02-03 14:14:00 (299304): Status Report: CPU Time: '26108.100000'
2025-02-03 15:53:01 (299304): Status Report: Elapsed Time: '84000.000000'
2025-02-03 15:53:01 (299304): Status Report: CPU Time: '28173.900000'
2025-02-03 16:54:41 (299304): Guest Log:  *** Job finished ***
2025-02-03 16:54:41 (299304): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-02-03 16:54:41 (299304): Guest Log: 2025-02-04 00:54:28,364 | INFO     | [job] job monitor thread has finished
2025-02-03 16:54:41 (299304): Guest Log: 2025-02-04 00:54:29,409 | INFO     | waiting for thread to finish: ['<_MainThread(MainThread, started 139622800471872)>', '<ExcThread(queue_monitor, started 139622516508416)>']
2025-02-03 16:54:41 (299304): Guest Log: 2025-02-04 00:54:31,081 | INFO     | waiting for thread to finish: ['<_MainThread(MainThread, started 139622800471872)>', '<ExcThread(queue_monitor, started 139622516508416)>']
2025-02-03 16:54:41 (299304): Guest Log: 2025-02-04 00:54:31,081 | INFO     | [job] queue monitor thread has finished
2025-02-03 16:54:41 (299304): Guest Log: 2025-02-04 00:54:31,413 | INFO     | caller=run is remaining thread - safe to abort (names=['<_MainThread(MainThread, started 139622800471872)>'])
2025-02-03 16:54:41 (299304): Guest Log: 2025-02-04 00:54:35,982 [wrapper] supervise_pilot (15 min periods counter: 96)
2025-02-03 16:54:41 (299304): Guest Log: 2025-02-04 00:54:36,420 | INFO     | all workflow threads have been joined
2025-02-03 16:54:41 (299304): Guest Log: 2025-02-04 00:54:36,420 | INFO     | end of generic workflow (traces error code: 0)
2025-02-03 16:54:41 (299304): Guest Log: 2025-02-04 00:54:36,421 | INFO     | traces error code: 0
2025-02-03 16:54:41 (299304): Guest Log: 2025-02-04 00:54:36,421 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-02-03 16:54:41 (299304): Guest Log: 2025-02-04 00:54:37,464 [wrapper] ==== pilot stdout END ====
2025-02-03 16:54:41 (299304): Guest Log: 2025-02-04 00:54:37,476 [wrapper] ==== wrapper stdout RESUME ====
2025-02-03 16:54:41 (299304): Guest Log: 2025-02-04 00:54:37,526 [wrapper] pilotpid: 5978
2025-02-03 16:54:41 (299304): Guest Log: 2025-02-04 00:54:37,538 [wrapper] Pilot exit status: 0
2025-02-03 16:54:41 (299304): Guest Log: 2025-02-04 00:54:38,249 [wrapper] pandaids: 6496248183
2025-02-03 16:54:41 (299304): Guest Log: 2025-02-04 00:54:38,761 [wrapper] cleanup supervisor_pilot 21482 5979
2025-02-03 16:54:42 (299304): Guest Log: 2025-02-04 00:54:38,866 [wrapper] Test setup, not cleaning
2025-02-03 16:54:42 (299304): Guest Log: 2025-02-04 00:54:38,977 [wrapper] apfmon messages muted
2025-02-03 16:54:42 (299304): Guest Log: 2025-02-04 00:54:39,070 [wrapper] ==== wrapper stdout END ====
2025-02-03 16:54:42 (299304): Guest Log: 2025-02-04 00:54:39,082 [wrapper] ==== wrapper stderr END ====
2025-02-03 16:54:42 (299304): Guest Log:  *** Error codes and diagnostics ***
2025-02-03 16:54:42 (299304): Guest Log:  *** Listing of results directory ***
2025-02-03 16:54:42 (299304): Guest Log: total 28508
2025-02-03 16:54:42 (299304): Guest Log: -rw-r--r--. 1 atlas atlas  491065 Jan 30 18:18 pilot3.tar.gz
2025-02-03 16:54:42 (299304): Guest Log: -rw-r--r--. 1 atlas atlas    5117 Jan 30 18:39 queuedata.json
2025-02-03 16:54:42 (299304): Guest Log: -rwx------. 1 atlas atlas   34924 Jan 30 18:39 runpilot2-wrapper.sh
2025-02-03 16:54:42 (299304): Guest Log: -rw-r--r--. 1 atlas atlas    6322 Feb  3 00:50 init_data.xml
2025-02-03 16:54:42 (299304): Guest Log: -rw-r--r--. 1 atlas atlas   17569 Feb  3 00:50 start_atlas.sh
2025-02-03 16:54:42 (299304): Guest Log: -rw-r--r--. 1 atlas atlas  503500 Feb  3 00:50 input.tar.gz
2025-02-03 16:54:42 (299304): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Feb  3 00:51 EVNT.43092790._000035.pool.root.1 -> /data/./ATLAS.root_0
2025-02-03 16:54:42 (299304): Guest Log: -rw-r--r--. 1 atlas atlas    2550 Feb  3 00:51 pandaJob.out
2025-02-03 16:54:42 (299304): Guest Log: -rw-------. 1 atlas atlas     424 Feb  3 00:52 setup.sh.local
2025-02-03 16:54:42 (299304): Guest Log: -rw-------. 1 atlas atlas  969298 Feb  3 00:57 agis_schedconf.cvmfs.json
2025-02-03 16:54:42 (299304): Guest Log: -rw-------. 1 atlas atlas 1580185 Feb  3 00:57 agis_ddmendpoints.agis.ALL.json
2025-02-03 16:54:42 (299304): Guest Log: drwx------. 4 atlas atlas    4096 Feb  3 00:57 pilot3
2025-02-03 16:54:42 (299304): Guest Log: -rw-------. 1 atlas atlas      95 Feb  4 00:53 pilot_heartbeat.json
2025-02-03 16:54:42 (299304): Guest Log: drwxrwx---. 2 atlas atlas    4096 Feb  4 00:54 PanDA_Pilot-6496248183
2025-02-03 16:54:42 (299304): Guest Log: -rw-------. 1 atlas atlas    1025 Feb  4 00:54 memory_monitor_summary.json
2025-02-03 16:54:42 (299304): Guest Log: -rw-------. 1 atlas atlas    1146 Feb  4 00:54 heartbeat.json
2025-02-03 16:54:42 (299304): Guest Log: -rw-------. 1 atlas atlas 8485774 Feb  4 00:54 pilotlog.txt
2025-02-03 16:54:42 (299304): Guest Log: -rw-------. 1 atlas atlas 8505968 Feb  4 00:54 log.43092792._001728.job.log.1
2025-02-03 16:54:42 (299304): Guest Log: -rw-r--r--. 1 atlas atlas     571 Feb  4 00:54 runtime_log
2025-02-03 16:54:42 (299304): Guest Log: -rw-------. 1 atlas atlas 8519680 Feb  4 00:54 result.tar.gz
2025-02-03 16:54:42 (299304): Guest Log: -rw-r--r--. 1 atlas atlas   10323 Feb  4 00:54 runtime_log.err
2025-02-03 16:54:42 (299304): Guest Log: -rw-------. 1 atlas atlas     674 Feb  4 00:54 CvkLDm0cox6nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmPlLKDmmRDDbn.diag
2025-02-03 16:54:42 (299304): Guest Log: Looking for outputfile HITS.43092792._001728.pool.root.1
2025-02-03 16:54:42 (299304): Guest Log: No HITS file was produced
2025-02-03 16:54:42 (299304): Guest Log: Successfully finished the ATLAS job!
2025-02-03 16:54:42 (299304): Guest Log: Copying the results back to the shared directory!
2025-02-03 16:54:44 (299304): Guest Log:  *** Contents of shared directory: ***
2025-02-03 16:54:44 (299304): Guest Log: total 350324
2025-02-03 16:54:44 (299304): Guest Log: -rw-r--r--. 1 root root 349677525 Feb  3 00:46 ATLAS.root_0
2025-02-03 16:54:44 (299304): Guest Log: -rw-r--r--. 1 root root      6322 Feb  3 00:46 init_data.xml
2025-02-03 16:54:44 (299304): Guest Log: -rw-r--r--. 1 root root    503500 Feb  3 00:46 input.tar.gz
2025-02-03 16:54:44 (299304): Guest Log: -rw-r--r--. 1 root root   8519680 Feb  4 00:54 result.tar.gz
2025-02-03 16:54:44 (299304): Guest Log: -rw-r--r--. 1 root root     17569 Feb  3 00:46 start_atlas.sh
2025-02-03 16:54:45 (299304): Guest Log:  *** Success! Shutting down the machine. ***
2025-02-03 16:54:45 (299304): VM Completion File Detected.
2025-02-03 16:54:45 (299304): Powering off VM.
2025-02-03 16:54:45 (299304): Successfully stopped VM.
2025-02-03 16:54:45 (299304): Deregistering VM. (boinc_b565b0aa54cff923, slot#0)
2025-02-03 16:54:45 (299304): Removing network bandwidth throttle group from VM.
2025-02-03 16:54:46 (299304): Removing VM from VirtualBox.
16:54:51 (299304): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN