Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
2025-02-01 16:40:00 (276068): Detected: vboxwrapper 26206
2025-02-01 16:40:00 (276068): Detected: BOINC client v7.24.1
2025-02-01 16:40:01 (276068): Detected: VirtualBox VboxManage Interface (Version: 7.0.16)
2025-02-01 16:40:01 (276068): Successfully copied 'init_data.xml' to the shared directory.
2025-02-01 16:40:01 (276068): Create VM. (boinc_a77f36440c3417b1, slot#0)
2025-02-01 16:40:01 (276068): Setting Memory Size for VM. (4200MB)
2025-02-01 16:40:01 (276068): Setting CPU Count for VM. (2)
2025-02-01 16:40:01 (276068): Setting Chipset Options for VM.
2025-02-01 16:40:02 (276068): Setting Graphics Controller Options for VM.
2025-02-01 16:40:02 (276068): Setting Boot Options for VM.
2025-02-01 16:40:02 (276068): Setting Network Configuration for NAT.
2025-02-01 16:40:02 (276068): Enabling VM Network Access.
2025-02-01 16:40:02 (276068): Disabling USB Support for VM.
2025-02-01 16:40:02 (276068): Disabling COM Port Support for VM.
2025-02-01 16:40:02 (276068): Disabling LPT Port Support for VM.
2025-02-01 16:40:02 (276068): Disabling Audio Support for VM.
2025-02-01 16:40:03 (276068): Disabling Clipboard Support for VM.
2025-02-01 16:40:03 (276068): Disabling Drag and Drop Support for VM.
2025-02-01 16:40:03 (276068): Adding storage controller(s) to VM.
2025-02-01 16:40:03 (276068): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-02-01 16:40:05 (276068): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-02-01 16:40:05 (276068): forwarding host port 51187 to guest port 80
2025-02-01 16:40:05 (276068): Enabling remote desktop for VM.
2025-02-01 16:40:05 (276068): Enabling shared directory for VM.
2025-02-01 16:40:06 (276068): Starting VM using VBoxManage interface. (boinc_a77f36440c3417b1, slot#0)
2025-02-01 16:40:07 (276068): Successfully started VM. (PID = '276547')
2025-02-01 16:40:07 (276068): Reporting VM Process ID to BOINC.
2025-02-01 16:40:07 (276068): Guest Log: BIOS: VirtualBox 7.0.16
2025-02-01 16:40:07 (276068): Guest Log: CPUID EDX: 0x178bfbff
2025-02-01 16:40:07 (276068): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-02-01 16:40:07 (276068): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-02-01 16:40:07 (276068): VM state change detected. (old = 'poweredoff', new = 'running')
2025-02-01 16:40:07 (276068): Detected: Web Application Enabled (http://localhost:51187)
2025-02-01 16:40:07 (276068): Detected: Remote Desktop Enabled (localhost:59867)
2025-02-01 16:40:08 (276068): VM state change detected. (old = 'running', new = 'paused')
2025-02-01 16:40:21 (276068): Preference change detected
2025-02-01 16:40:21 (276068): Setting CPU throttle for VM. (15%)
2025-02-01 16:40:21 (276068): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 180 seconds) or (Vbox_job.xml: 900 seconds))
2025-02-01 16:40:22 (276068): VM state change detected. (old = 'paused', new = 'running')
2025-02-01 16:40:23 (276068): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-02-01 16:40:23 (276068): Guest Log: BIOS: Booting from Hard Disk...
2025-02-01 16:40:36 (276068): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-02-01 16:40:36 (276068): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-02-01 16:40:36 (276068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-02-01 16:40:36 (276068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-02-01 16:40:36 (276068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-02-01 16:40:36 (276068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-02-01 16:40:36 (276068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-02-01 16:40:36 (276068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-02-01 16:40:36 (276068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-02-01 16:40:36 (276068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-02-01 16:40:36 (276068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-02-01 16:40:36 (276068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-02-01 16:40:36 (276068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-02-01 16:40:36 (276068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-02-01 16:40:36 (276068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-02-01 16:40:36 (276068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-02-01 16:40:36 (276068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-02-01 16:40:36 (276068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-02-01 16:40:36 (276068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-02-01 16:40:36 (276068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-02-01 16:40:36 (276068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-02-01 16:40:36 (276068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-02-01 16:40:36 (276068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-02-01 16:40:36 (276068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-02-01 16:40:36 (276068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-02-01 16:40:36 (276068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-02-01 16:40:36 (276068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-02-01 16:40:36 (276068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-02-01 16:40:36 (276068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-02-01 16:40:36 (276068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-02-01 16:40:36 (276068): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-02-01 16:40:36 (276068): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-02-01 16:41:11 (276068): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-02-01 16:41:11 (276068): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-02-01 16:42:45 (276068): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-02-01 16:42:45 (276068): Guest Log: 00:00:00.000543 main     Log opened 2025-02-02T00:42:30.053003000Z
2025-02-01 16:42:45 (276068): Guest Log: 00:00:00.083791 main     OS Product: Linux
2025-02-01 16:42:45 (276068): Guest Log: 00:00:00.084162 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-02-01 16:42:45 (276068): Guest Log: 00:00:00.084331 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-02-01 16:42:45 (276068): Guest Log: 00:00:00.084507 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-02-01 16:42:45 (276068): Guest Log: 00:00:00.084512 main     Process ID: 1278
2025-02-01 16:42:45 (276068): Guest Log: 00:00:00.084514 main     Package type: LINUX_64BITS_GENERIC
2025-02-01 16:42:45 (276068): Guest Log: 00:00:00.087461 main     5.2.32 r132073 started. Verbose level = 0
2025-02-01 16:42:46 (276068): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-02-01 16:42:46 (276068): Guest Log: [INFO] Mounting shared directory
2025-02-01 16:42:47 (276068): Guest Log: [INFO] Checking for init_data.xml
2025-02-01 16:43:08 (276068): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-02-01 16:43:08 (276068): Guest Log: [INFO] Detected branch: prod
2025-02-01 16:43:09 (276068): Guest Log: This is the prod version of the ATLAS job wrapper
2025-02-01 16:43:10 (276068): Guest Log: Copying input files
2025-02-01 16:43:41 (276068): Guest Log: Copied input files into RunAtlas.
2025-02-01 16:43:42 (276068): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-02-01 16:43:42 (276068): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-02-01 16:43:42 (276068): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-02-01 16:43:42 (276068): Guest Log: Further information can be found at the LHC@home message board.
2025-02-01 16:44:03 (276068): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-02-01 16:44:05 (276068): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-02-01 16:44:05 (276068): Guest Log: 2.6.3.0 1557 1 32192 142189 3 1 3117296 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-02-01 16:44:11 (276068): Guest Log: copied the webapp to /var/www
2025-02-01 16:44:11 (276068): Guest Log: ATHENA_PROC_NUMBER=2
2025-02-01 16:44:11 (276068): Guest Log: ATHENA_CORE_NUMBER=2
2025-02-01 16:44:12 (276068): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-02-01 16:44:12 (276068): Guest Log:  *** Starting ATLAS job. (PandaID=6495986286 taskID=43092792) ***
2025-02-01 18:19:22 (276068): Status Report: Elapsed Time: '6000.000000'
2025-02-01 18:19:22 (276068): Status Report: CPU Time: '1548.260000'
2025-02-01 19:58:22 (276068): Status Report: Elapsed Time: '12000.000000'
2025-02-01 19:58:22 (276068): Status Report: CPU Time: '3435.980000'
2025-02-01 21:37:23 (276068): Status Report: Elapsed Time: '18000.000000'
2025-02-01 21:37:23 (276068): Status Report: CPU Time: '5506.090000'
2025-02-01 23:16:24 (276068): Status Report: Elapsed Time: '24000.000000'
2025-02-01 23:16:24 (276068): Status Report: CPU Time: '7575.790000'
2025-02-02 00:55:25 (276068): Status Report: Elapsed Time: '30000.000000'
2025-02-02 00:55:25 (276068): Status Report: CPU Time: '9637.060000'
2025-02-02 02:34:25 (276068): Status Report: Elapsed Time: '36000.000000'
2025-02-02 02:34:25 (276068): Status Report: CPU Time: '11708.680000'
2025-02-02 04:13:26 (276068): Status Report: Elapsed Time: '42000.000000'
2025-02-02 04:13:26 (276068): Status Report: CPU Time: '13764.410000'
2025-02-02 05:52:27 (276068): Status Report: Elapsed Time: '48000.000000'
2025-02-02 05:52:27 (276068): Status Report: CPU Time: '15838.250000'
2025-02-02 07:31:28 (276068): Status Report: Elapsed Time: '54000.000000'
2025-02-02 07:31:28 (276068): Status Report: CPU Time: '17893.370000'
2025-02-02 09:10:28 (276068): Status Report: Elapsed Time: '60000.000000'
2025-02-02 09:10:28 (276068): Status Report: CPU Time: '19974.500000'
2025-02-02 10:49:29 (276068): Status Report: Elapsed Time: '66000.000000'
2025-02-02 10:49:29 (276068): Status Report: CPU Time: '22033.540000'
2025-02-02 12:28:30 (276068): Status Report: Elapsed Time: '72000.000000'
2025-02-02 12:28:30 (276068): Status Report: CPU Time: '24107.470000'
2025-02-02 14:07:31 (276068): Status Report: Elapsed Time: '78000.000000'
2025-02-02 14:07:31 (276068): Status Report: CPU Time: '26181.270000'
2025-02-02 15:46:31 (276068): Status Report: Elapsed Time: '84000.000000'
2025-02-02 15:46:31 (276068): Status Report: CPU Time: '28254.050000'
2025-02-02 16:46:11 (276068): Guest Log:  *** Job finished ***
2025-02-02 16:46:11 (276068): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-02-02 16:46:11 (276068): Guest Log: 2025-02-03 00:45:53,091 | INFO     | waiting for thread to finish: ['<_MainThread(MainThread, started 140566368405312)>', '<ExcThread(queue_monitor, started 140565328938752)>']
2025-02-02 16:46:11 (276068): Guest Log: 2025-02-03 00:45:55,094 | INFO     | waiting for thread to finish: ['<_MainThread(MainThread, started 140566368405312)>', '<ExcThread(queue_monitor, started 140565328938752)>']
2025-02-02 16:46:11 (276068): Guest Log: 2025-02-03 00:45:57,098 | INFO     | waiting for thread to finish: ['<_MainThread(MainThread, started 140566368405312)>', '<ExcThread(queue_monitor, started 140565328938752)>']
2025-02-02 16:46:11 (276068): Guest Log: 2025-02-03 00:45:57,184 | INFO     | waiting for thread to finish: ['<_MainThread(MainThread, started 140566368405312)>', '<ExcThread(queue_monitor, started 140565328938752)>']
2025-02-02 16:46:11 (276068): Guest Log: 2025-02-03 00:45:57,184 | INFO     | [job] queue monitor thread has finished
2025-02-02 16:46:11 (276068): Guest Log: 2025-02-03 00:45:59,102 | INFO     | caller=run is remaining thread - safe to abort (names=['<_MainThread(MainThread, started 140566368405312)>'])
2025-02-02 16:46:11 (276068): Guest Log: 2025-02-03 00:46:04,108 | INFO     | all workflow threads have been joined
2025-02-02 16:46:11 (276068): Guest Log: 2025-02-03 00:46:04,108 | INFO     | end of generic workflow (traces error code: 0)
2025-02-02 16:46:11 (276068): Guest Log: 2025-02-03 00:46:04,109 | INFO     | traces error code: 0
2025-02-02 16:46:11 (276068): Guest Log: 2025-02-03 00:46:04,109 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-02-02 16:46:11 (276068): Guest Log: 2025-02-03 00:46:05,211 [wrapper] ==== pilot stdout END ====
2025-02-02 16:46:11 (276068): Guest Log: 2025-02-03 00:46:05,312 [wrapper] ==== wrapper stdout RESUME ====
2025-02-02 16:46:11 (276068): Guest Log: 2025-02-03 00:46:05,411 [wrapper] pilotpid: 5948
2025-02-02 16:46:11 (276068): Guest Log: 2025-02-03 00:46:05,508 [wrapper] Pilot exit status: 0
2025-02-02 16:46:11 (276068): Guest Log: 2025-02-03 00:46:06,104 [wrapper] pandaids: 6495986286
2025-02-02 16:46:11 (276068): Guest Log: 2025-02-03 00:46:06,417 [wrapper] cleanup supervisor_pilot 20234 5949
2025-02-02 16:46:11 (276068): Guest Log: 2025-02-03 00:46:06,520 [wrapper] Test setup, not cleaning
2025-02-02 16:46:11 (276068): Guest Log: 2025-02-03 00:46:06,618 [wrapper] apfmon messages muted
2025-02-02 16:46:11 (276068): Guest Log: 2025-02-03 00:46:06,786 [wrapper] ==== wrapper stdout END ====
2025-02-02 16:46:11 (276068): Guest Log: 2025-02-03 00:46:06,798 [wrapper] ==== wrapper stderr END ====
2025-02-02 16:46:11 (276068): Guest Log:  *** Error codes and diagnostics ***
2025-02-02 16:46:11 (276068): Guest Log:  *** Listing of results directory ***
2025-02-02 16:46:11 (276068): Guest Log: total 28836
2025-02-02 16:46:11 (276068): Guest Log: -rw-r--r--. 1 atlas atlas  491065 Jan 30 17:42 pilot3.tar.gz
2025-02-02 16:46:11 (276068): Guest Log: -rw-r--r--. 1 atlas atlas    5117 Jan 30 18:05 queuedata.json
2025-02-02 16:46:11 (276068): Guest Log: -rwx------. 1 atlas atlas   34924 Jan 30 18:06 runpilot2-wrapper.sh
2025-02-02 16:46:11 (276068): Guest Log: -rw-r--r--. 1 atlas atlas    6321 Feb  2 00:42 init_data.xml
2025-02-02 16:46:11 (276068): Guest Log: -rw-r--r--. 1 atlas atlas   17569 Feb  2 00:42 start_atlas.sh
2025-02-02 16:46:11 (276068): Guest Log: -rw-r--r--. 1 atlas atlas  503500 Feb  2 00:42 input.tar.gz
2025-02-02 16:46:11 (276068): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Feb  2 00:43 EVNT.43092790._000033.pool.root.1 -> /data/./ATLAS.root_0
2025-02-02 16:46:11 (276068): Guest Log: -rw-r--r--. 1 atlas atlas    2551 Feb  2 00:43 pandaJob.out
2025-02-02 16:46:11 (276068): Guest Log: -rw-------. 1 atlas atlas     424 Feb  2 00:44 setup.sh.local
2025-02-02 16:46:11 (276068): Guest Log: -rw-------. 1 atlas atlas  969250 Feb  2 00:48 agis_schedconf.cvmfs.json
2025-02-02 16:46:11 (276068): Guest Log: -rw-------. 1 atlas atlas 1580185 Feb  2 00:48 agis_ddmendpoints.agis.ALL.json
2025-02-02 16:46:11 (276068): Guest Log: drwx------. 4 atlas atlas    4096 Feb  2 00:48 pilot3
2025-02-02 16:46:11 (276068): Guest Log: -rw-------. 1 atlas atlas      95 Feb  3 00:45 pilot_heartbeat.json
2025-02-02 16:46:11 (276068): Guest Log: drwxrwx---. 2 atlas atlas    4096 Feb  3 00:45 PanDA_Pilot-6495986286
2025-02-02 16:46:11 (276068): Guest Log: -rw-------. 1 atlas atlas    1025 Feb  3 00:45 memory_monitor_summary.json
2025-02-02 16:46:11 (276068): Guest Log: -rw-------. 1 atlas atlas    1147 Feb  3 00:45 heartbeat.json
2025-02-02 16:46:11 (276068): Guest Log: -rw-------. 1 atlas atlas 8597149 Feb  3 00:46 pilotlog.txt
2025-02-02 16:46:11 (276068): Guest Log: -rw-------. 1 atlas atlas 8617264 Feb  3 00:46 log.43092792._001475.job.log.1
2025-02-02 16:46:11 (276068): Guest Log: -rw-r--r--. 1 atlas atlas     571 Feb  3 00:46 runtime_log
2025-02-02 16:46:11 (276068): Guest Log: -rw-------. 1 atlas atlas 8632320 Feb  3 00:46 result.tar.gz
2025-02-02 16:46:11 (276068): Guest Log: -rw-------. 1 atlas atlas     674 Feb  3 00:46 s8yMDmN7nx6nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm2hLKDmk7OLPo.diag
2025-02-02 16:46:11 (276068): Guest Log: -rw-r--r--. 1 atlas atlas   10323 Feb  3 00:46 runtime_log.err
2025-02-02 16:46:12 (276068): Guest Log: Looking for outputfile HITS.43092792._001475.pool.root.1
2025-02-02 16:46:12 (276068): Guest Log: No HITS file was produced
2025-02-02 16:46:12 (276068): Guest Log: Successfully finished the ATLAS job!
2025-02-02 16:46:12 (276068): Guest Log: Copying the results back to the shared directory!
2025-02-02 16:46:14 (276068): Guest Log:  *** Contents of shared directory: ***
2025-02-02 16:46:14 (276068): Guest Log: total 349736
2025-02-02 16:46:14 (276068): Guest Log: -rw-r--r--. 1 root root 348960938 Feb  2 00:40 ATLAS.root_0
2025-02-02 16:46:14 (276068): Guest Log: -rw-r--r--. 1 root root      6321 Feb  2 00:40 init_data.xml
2025-02-02 16:46:14 (276068): Guest Log: -rw-r--r--. 1 root root    503500 Feb  2 00:40 input.tar.gz
2025-02-02 16:46:14 (276068): Guest Log: -rw-r--r--. 1 root root   8632320 Feb  3 00:46 result.tar.gz
2025-02-02 16:46:14 (276068): Guest Log: -rw-r--r--. 1 root root     17569 Feb  2 00:40 start_atlas.sh
2025-02-02 16:46:14 (276068): Guest Log:  *** Success! Shutting down the machine. ***
2025-02-02 16:46:15 (276068): VM Completion File Detected.
2025-02-02 16:46:15 (276068): Powering off VM.
2025-02-02 16:46:15 (276068): Successfully stopped VM.
2025-02-02 16:46:15 (276068): Deregistering VM. (boinc_a77f36440c3417b1, slot#0)
2025-02-02 16:46:15 (276068): Removing network bandwidth throttle group from VM.
2025-02-02 16:46:16 (276068): Removing VM from VirtualBox.
16:46:21 (276068): called boinc_finish(0)

</stderr_txt>
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