Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-02-03 02:48:42 (2900): Detected: vboxwrapper 26206
2025-02-03 02:48:42 (2900): Detected: BOINC client v8.0.2
2025-02-03 02:48:43 (2900): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-02-03 02:48:44 (2900): Successfully copied 'init_data.xml' to the shared directory.
2025-02-03 02:48:44 (2900): Create VM. (boinc_ecf8a9ca7920ba73, slot#6)
2025-02-03 02:48:45 (2900): Setting Memory Size for VM. (4800MB)
2025-02-03 02:48:46 (2900): Setting CPU Count for VM. (8)
2025-02-03 02:48:46 (2900): Setting Chipset Options for VM.
2025-02-03 02:48:46 (2900): Setting Graphics Controller Options for VM.
2025-02-03 02:48:47 (2900): Setting Boot Options for VM.
2025-02-03 02:48:47 (2900): Setting Network Configuration for NAT.
2025-02-03 02:48:47 (2900): Enabling VM Network Access.
2025-02-03 02:48:48 (2900): Disabling USB Support for VM.
2025-02-03 02:48:48 (2900): Disabling COM Port Support for VM.
2025-02-03 02:48:48 (2900): Disabling LPT Port Support for VM.
2025-02-03 02:48:49 (2900): Disabling Audio Support for VM.
2025-02-03 02:48:49 (2900): Disabling Clipboard Support for VM.
2025-02-03 02:48:49 (2900): Disabling Drag and Drop Support for VM.
2025-02-03 02:48:50 (2900): Adding storage controller(s) to VM.
2025-02-03 02:48:50 (2900): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-02-03 02:48:56 (2900): Adding VirtualBox Guest Additions to VM.
2025-02-03 02:48:56 (2900): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-02-03 02:48:58 (2900): forwarding host port 61505 to guest port 80
2025-02-03 02:48:58 (2900): Enabling remote desktop for VM.
2025-02-03 02:48:59 (2900): Required extension pack not installed, remote desktop not enabled.
2025-02-03 02:48:59 (2900): Enabling shared directory for VM.
2025-02-03 02:49:00 (2900): Starting VM using VBoxManage interface. (boinc_ecf8a9ca7920ba73, slot#6)
2025-02-03 02:49:07 (2900): Successfully started VM. (PID = '2884')
2025-02-03 02:49:07 (2900): Reporting VM Process ID to BOINC.
2025-02-03 02:49:07 (2900): Guest Log: BIOS: VirtualBox 7.0.6
2025-02-03 02:49:07 (2900): Guest Log: CPUID EDX: 0x178bfbff
2025-02-03 02:49:07 (2900): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-02-03 02:49:07 (2900): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-02-03 02:49:07 (2900): VM state change detected. (old = 'poweredoff', new = 'running')
2025-02-03 02:49:07 (2900): Detected: Web Application Enabled (http://localhost:61505)
2025-02-03 02:49:07 (2900): Preference change detected
2025-02-03 02:49:07 (2900): Setting CPU throttle for VM. (100%)
2025-02-03 02:49:08 (2900): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-02-03 02:49:09 (2900): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-02-03 02:49:09 (2900): Guest Log: BIOS: Booting from Hard Disk...
2025-02-03 02:49:12 (2900): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-02-03 02:49:12 (2900): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-02-03 02:49:12 (2900): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-02-03 02:49:12 (2900): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-02-03 02:49:12 (2900): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-02-03 02:49:12 (2900): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-02-03 02:49:12 (2900): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-02-03 02:49:12 (2900): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-02-03 02:49:12 (2900): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-02-03 02:49:12 (2900): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-02-03 02:49:12 (2900): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-02-03 02:49:12 (2900): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-02-03 02:49:12 (2900): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-02-03 02:49:12 (2900): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-02-03 02:49:12 (2900): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-02-03 02:49:12 (2900): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-02-03 02:49:12 (2900): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-02-03 02:49:12 (2900): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-02-03 02:49:12 (2900): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-02-03 02:49:12 (2900): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-02-03 02:49:12 (2900): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-02-03 02:49:12 (2900): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-02-03 02:49:12 (2900): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-02-03 02:49:12 (2900): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-02-03 02:49:12 (2900): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-02-03 02:49:12 (2900): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-02-03 02:49:12 (2900): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-02-03 02:49:12 (2900): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-02-03 02:49:12 (2900): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-02-03 02:49:12 (2900): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-02-03 02:49:12 (2900): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-02-03 02:49:12 (2900): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-02-03 02:49:22 (2900): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-02-03 02:49:22 (2900): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-02-03 02:49:36 (2900): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-02-03 02:49:36 (2900): Guest Log: 00:00:00.000201 main     Log opened 2025-02-03T02:49:34.108359000Z
2025-02-03 02:49:36 (2900): Guest Log: 00:00:00.000335 main     OS Product: Linux
2025-02-03 02:49:36 (2900): Guest Log: 00:00:00.000379 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-02-03 02:49:36 (2900): Guest Log: 00:00:00.000443 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-02-03 02:49:36 (2900): Guest Log: 00:00:00.000485 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-02-03 02:49:36 (2900): Guest Log: 00:00:00.000486 main     Process ID: 1366
2025-02-03 02:49:36 (2900): Guest Log: 00:00:00.000487 main     Package type: LINUX_64BITS_GENERIC
2025-02-03 02:49:36 (2900): Guest Log: 00:00:00.001272 main     5.2.32 r132073 started. Verbose level = 0
2025-02-03 02:49:36 (2900): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-02-03 02:49:36 (2900): Guest Log: [INFO] Mounting shared directory
2025-02-03 02:49:36 (2900): Guest Log: [INFO] Checking for init_data.xml
2025-02-03 02:49:46 (2900): Guest Log: 00:00:10.003603 timesync vgsvcTimeSyncWorker: Radical guest time change: 28 811 739 248 000ns (GuestNow=1 738 579 785 850 480 000 ns GuestLast=1 738 550 974 111 232 000 ns fSetTimeLastLoop=true )
2025-02-03 02:49:47 (2900): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-02-03 02:49:47 (2900): Guest Log: [INFO] Detected branch: prod
2025-02-03 02:49:48 (2900): Guest Log: This is the prod version of the ATLAS job wrapper
2025-02-03 02:49:48 (2900): Guest Log: Copying input files
2025-02-03 02:49:54 (2900): Guest Log: Copied input files into RunAtlas.
2025-02-03 02:49:54 (2900): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-02-03 02:49:54 (2900): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-02-03 02:49:54 (2900): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-02-03 02:49:54 (2900): Guest Log: Further information can be found at the LHC@home message board.
2025-02-03 02:50:05 (2900): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-02-03 02:50:05 (2900): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-02-03 02:50:05 (2900): Guest Log: 2.6.3.0 1651 0 32044 142240 4 1 3117296 4096000 0 65024 0 0 n/a 0 0 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-02-03 02:50:16 (2900): Guest Log: copied the webapp to /var/www
2025-02-03 02:50:16 (2900): Guest Log: ATHENA_PROC_NUMBER=8
2025-02-03 02:50:16 (2900): Guest Log: ATHENA_CORE_NUMBER=8
2025-02-03 02:50:16 (2900): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-02-03 02:50:16 (2900): Guest Log:  *** Starting ATLAS job. (PandaID=6494624588 taskID=43078919) ***
2025-02-03 04:44:18 (2900): Status Report: Elapsed Time: '6000.849560'
2025-02-03 04:44:18 (2900): Status Report: CPU Time: '42556.557997'
2025-02-03 06:44:10 (2900): Status Report: Elapsed Time: '12001.054165'
2025-02-03 06:44:10 (2900): Status Report: CPU Time: '98545.972101'
2025-02-03 08:39:58 (2900): VM state change detected. (old = 'running', new = 'paused')
2025-02-03 08:43:02 (2900): VM state change detected. (old = 'paused', new = 'running')
2025-02-03 08:50:02 (2900): VM state change detected. (old = 'running', new = 'paused')
2025-02-03 08:53:06 (2900): VM state change detected. (old = 'paused', new = 'running')
2025-02-03 08:55:08 (2900): Status Report: Elapsed Time: '18001.155445'
2025-02-03 08:55:08 (2900): Status Report: CPU Time: '156837.851764'
2025-02-03 09:19:40 (2900): Guest Log:  *** Job finished ***
2025-02-03 09:19:40 (2900): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-02-03 09:19:40 (2900): Guest Log: 2025-02-03 17:13:30,302 | INFO     | [job] control thread has finished
2025-02-03 09:19:40 (2900): Guest Log: 2025-02-03 17:13:30,591 | INFO     | [data] copytool_out thread has finished
2025-02-03 09:19:40 (2900): Guest Log: 2025-02-03 17:13:31,865 | INFO     | [data] queue_monitor thread has finished
2025-02-03 09:19:40 (2900): Guest Log: 2025-02-03 17:13:33,576 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140577140406080)>', '<ExcThread(monitor, started 140576460617472)>']
2025-02-03 09:19:40 (2900): Guest Log: 2025-02-03 17:13:34,097 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-02-03 09:19:40 (2900): Guest Log: 2025-02-03 17:13:34,097 | INFO     | [monitor] control thread has ended
2025-02-03 09:19:40 (2900): Guest Log: 2025-02-03 17:13:38,583 | INFO     | all workflow threads have been joined
2025-02-03 09:19:40 (2900): Guest Log: 2025-02-03 17:13:38,583 | INFO     | end of generic workflow (traces error code: 0)
2025-02-03 09:19:40 (2900): Guest Log: 2025-02-03 17:13:38,584 | INFO     | traces error code: 0
2025-02-03 09:19:40 (2900): Guest Log: 2025-02-03 17:13:38,584 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-02-03 09:19:40 (2900): Guest Log: 2025-02-03 17:13:38,741 [wrapper] ==== pilot stdout END ====
2025-02-03 09:19:40 (2900): Guest Log: 2025-02-03 17:13:38,747 [wrapper] ==== wrapper stdout RESUME ====
2025-02-03 09:19:40 (2900): Guest Log: 2025-02-03 17:13:38,753 [wrapper] pilotpid: 6047
2025-02-03 09:19:40 (2900): Guest Log: 2025-02-03 17:13:38,759 [wrapper] Pilot exit status: 0
2025-02-03 09:19:40 (2900): Guest Log: 2025-02-03 17:13:38,884 [wrapper] pandaids: 6494624588
2025-02-03 09:19:40 (2900): Guest Log: 2025-02-03 17:13:38,922 [wrapper] cleanup supervisor_pilot 28822 6048
2025-02-03 09:19:40 (2900): Guest Log: 2025-02-03 17:13:38,928 [wrapper] Test setup, not cleaning
2025-02-03 09:19:40 (2900): Guest Log: 2025-02-03 17:13:38,940 [wrapper] apfmon messages muted
2025-02-03 09:19:40 (2900): Guest Log: 2025-02-03 17:13:38,947 [wrapper] ==== wrapper stdout END ====
2025-02-03 09:19:40 (2900): Guest Log: 2025-02-03 17:13:38,953 [wrapper] ==== wrapper stderr END ====
2025-02-03 09:19:40 (2900): Guest Log:  *** Error codes and diagnostics ***
2025-02-03 09:19:40 (2900): Guest Log:     "exeErrorCode": 0,
2025-02-03 09:19:40 (2900): Guest Log:     "exeErrorDiag": "",
2025-02-03 09:19:40 (2900): Guest Log:     "pilotErrorCode": 0,
2025-02-03 09:19:40 (2900): Guest Log:     "pilotErrorDiag": "",
2025-02-03 09:19:40 (2900): Guest Log:  *** Listing of results directory ***
2025-02-03 09:19:40 (2900): Guest Log: total 328460
2025-02-03 09:19:40 (2900): Guest Log: -rw-r--r--. 1 atlas atlas    491065 Jan 30 06:49 pilot3.tar.gz
2025-02-03 09:19:40 (2900): Guest Log: -rw-r--r--. 1 atlas atlas      5117 Jan 30 06:56 queuedata.json
2025-02-03 09:19:40 (2900): Guest Log: -rwx------. 1 atlas atlas     34924 Jan 30 06:59 runpilot2-wrapper.sh
2025-02-03 09:19:40 (2900): Guest Log: -rwxr-xr-x. 1 atlas atlas      8923 Feb  3 10:49 init_data.xml
2025-02-03 09:19:40 (2900): Guest Log: -rwxr-xr-x. 1 atlas atlas    503500 Feb  3 10:49 input.tar.gz
2025-02-03 09:19:40 (2900): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Feb  3 10:49 start_atlas.sh
2025-02-03 09:19:40 (2900): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb  3 10:49 EVNT.43078917._000419.pool.root.1 -> /data/./ATLAS.root_0
2025-02-03 09:19:40 (2900): Guest Log: -rw-r--r--. 1 atlas atlas      2545 Feb  3 10:50 pandaJob.out
2025-02-03 09:19:40 (2900): Guest Log: -rw-------. 1 atlas atlas       424 Feb  3 10:50 setup.sh.local
2025-02-03 09:19:40 (2900): Guest Log: -rw-------. 1 atlas atlas    970023 Feb  3 10:51 agis_schedconf.cvmfs.json
2025-02-03 09:19:40 (2900): Guest Log: drwx------. 4 atlas atlas      4096 Feb  3 10:52 pilot3
2025-02-03 09:19:40 (2900): Guest Log: -rw-------. 1 atlas atlas 327668295 Feb  3 17:12 HITS.43078919._010468.pool.root.1
2025-02-03 09:19:40 (2900): Guest Log: -rw-------. 1 atlas atlas      1048 Feb  3 17:12 memory_monitor_summary.json
2025-02-03 09:19:40 (2900): Guest Log: -rw-------. 1 atlas atlas   1580185 Feb  3 17:13 agis_ddmendpoints.agis.ALL.json
2025-02-03 09:19:40 (2900): Guest Log: -rw-------. 1 atlas atlas    458611 Feb  3 17:13 log.43078919._010468.job.log.tgz.1
2025-02-03 09:19:40 (2900): Guest Log: -rw-------. 1 atlas atlas        95 Feb  3 17:13 pilot_heartbeat.json
2025-02-03 09:19:40 (2900): Guest Log: -rw-------. 1 atlas atlas      7746 Feb  3 17:13 heartbeat.json
2025-02-03 09:19:40 (2900): Guest Log: -rw-------. 1 atlas atlas      4398 Feb  3 17:13 pilotlog.txt
2025-02-03 09:19:40 (2900): Guest Log: -rw-------. 1 atlas atlas   2020593 Feb  3 17:13 log.43078919._010468.job.log.1
2025-02-03 09:19:40 (2900): Guest Log: -rw-------. 1 atlas atlas       357 Feb  3 17:13 output.list
2025-02-03 09:19:40 (2900): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb  3 17:13 runtime_log
2025-02-03 09:19:40 (2900): Guest Log: -rw-------. 1 atlas atlas   2498560 Feb  3 17:13 result.tar.gz
2025-02-03 09:19:40 (2900): Guest Log: -rw-------. 1 atlas atlas       663 Feb  3 17:13 UkPNDmwhdx6nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmynKKDm4tnS4n.diag
2025-02-03 09:19:40 (2900): Guest Log: -rw-r--r--. 1 atlas atlas     10951 Feb  3 17:13 runtime_log.err
2025-02-03 09:19:40 (2900): Guest Log: Looking for outputfile HITS.43078919._010468.pool.root.1
2025-02-03 09:19:40 (2900): Guest Log: HITS file was successfully produced
2025-02-03 09:19:40 (2900): Guest Log: -rw-------. 1 atlas atlas 327668295 Feb  3 17:12 /home/atlas/RunAtlas/HITS.43078919._010468.pool.root.1
2025-02-03 09:19:42 (2900): Guest Log: Successfully finished the ATLAS job!
2025-02-03 09:19:42 (2900): Guest Log: Copying the results back to the shared directory!
2025-02-03 09:19:42 (2900): Guest Log:  *** Contents of shared directory: ***
2025-02-03 09:19:42 (2900): Guest Log: total 655036
2025-02-03 09:19:42 (2900): Guest Log: -rwxrwxrwx. 1 root root 340048938 Feb  3 10:48 ATLAS.root_0
2025-02-03 09:19:42 (2900): Guest Log: -rwxrwxrwx. 1 root root 327668295 Feb  3  2025 HITS.pool.root.1
2025-02-03 09:19:42 (2900): Guest Log: -rwxrwxrwx. 1 root root      8923 Feb  3 10:48 init_data.xml
2025-02-03 09:19:42 (2900): Guest Log: -rwxrwxrwx. 1 root root    503500 Jan 30 10:32 input.tar.gz
2025-02-03 09:19:42 (2900): Guest Log: -rwxrwxrwx. 1 root root   2498560 Feb  3  2025 result.tar.gz
2025-02-03 09:19:42 (2900): Guest Log: -rwxrwxrwx. 1 root root     17569 Jan 30 10:32 start_atlas.sh
2025-02-03 09:19:42 (2900): Guest Log:  *** Success! Shutting down the machine. ***
2025-02-03 09:19:42 (2900): VM Completion File Detected.
2025-02-03 09:19:42 (2900): Powering off VM.
2025-02-03 09:19:44 (2900): Successfully stopped VM.
2025-02-03 09:19:44 (2900): Deregistering VM. (boinc_ecf8a9ca7920ba73, slot#6)
2025-02-03 09:19:44 (2900): Removing network bandwidth throttle group from VM.
2025-02-03 09:19:46 (2900): Removing VM from VirtualBox.
09:19:51 (2900): called boinc_finish(0)

</stderr_txt>
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