Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-01-30 19:00:24 (14092): Detected: vboxwrapper 26206
2025-01-30 19:00:24 (14092): Detected: BOINC client v8.0.2
2025-01-30 19:00:24 (14092): Detected: VirtualBox VboxManage Interface (Version: 7.0.20)
2025-01-30 19:00:24 (14092): Successfully copied 'init_data.xml' to the shared directory.
2025-01-30 19:00:25 (14092): Create VM. (boinc_40ff0462dbc40b26, slot#6)
2025-01-30 19:00:25 (14092): Setting Memory Size for VM. (4300MB)
2025-01-30 19:00:26 (14092): Setting CPU Count for VM. (3)
2025-01-30 19:00:26 (14092): Setting Chipset Options for VM.
2025-01-30 19:00:26 (14092): Setting Graphics Controller Options for VM.
2025-01-30 19:00:26 (14092): Setting Boot Options for VM.
2025-01-30 19:00:27 (14092): Setting Network Configuration for NAT.
2025-01-30 19:00:27 (14092): Enabling VM Network Access.
2025-01-30 19:00:27 (14092): Disabling USB Support for VM.
2025-01-30 19:00:27 (14092): Disabling COM Port Support for VM.
2025-01-30 19:00:28 (14092): Disabling LPT Port Support for VM.
2025-01-30 19:00:28 (14092): Disabling Audio Support for VM.
2025-01-30 19:00:28 (14092): Disabling Clipboard Support for VM.
2025-01-30 19:00:28 (14092): Disabling Drag and Drop Support for VM.
2025-01-30 19:00:29 (14092): Adding storage controller(s) to VM.
2025-01-30 19:00:29 (14092): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-01-30 19:00:30 (14092): Adding VirtualBox Guest Additions to VM.
2025-01-30 19:00:30 (14092): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-01-30 19:00:30 (14092): forwarding host port 63257 to guest port 80
2025-01-30 19:00:30 (14092): Enabling remote desktop for VM.
2025-01-30 19:00:31 (14092): Required extension pack not installed, remote desktop not enabled.
2025-01-30 19:00:31 (14092): Enabling shared directory for VM.
2025-01-30 19:00:31 (14092): Starting VM using VBoxManage interface. (boinc_40ff0462dbc40b26, slot#6)
2025-01-30 19:00:38 (14092): Successfully started VM. (PID = '26436')
2025-01-30 19:00:38 (14092): Reporting VM Process ID to BOINC.
2025-01-30 19:00:38 (14092): Guest Log: BIOS: VirtualBox 7.0.20
2025-01-30 19:00:38 (14092): Guest Log: CPUID EDX: 0x178bfbff
2025-01-30 19:00:38 (14092): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-01-30 19:00:38 (14092): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-01-30 19:00:38 (14092): VM state change detected. (old = 'poweredoff', new = 'running')
2025-01-30 19:00:38 (14092): Detected: Web Application Enabled (http://localhost:63257)
2025-01-30 19:00:38 (14092): Preference change detected
2025-01-30 19:00:38 (14092): Setting CPU throttle for VM. (75%)
2025-01-30 19:00:39 (14092): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-01-30 19:00:40 (14092): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-01-30 19:00:40 (14092): Guest Log: BIOS: Booting from Hard Disk...
2025-01-30 19:00:43 (14092): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-01-30 19:00:43 (14092): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-01-30 19:00:43 (14092): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-01-30 19:00:43 (14092): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-01-30 19:00:43 (14092): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-01-30 19:00:43 (14092): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-01-30 19:00:43 (14092): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-01-30 19:00:43 (14092): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-01-30 19:00:43 (14092): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-01-30 19:00:43 (14092): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-01-30 19:00:43 (14092): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-01-30 19:00:43 (14092): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-01-30 19:00:43 (14092): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-01-30 19:00:43 (14092): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-01-30 19:00:43 (14092): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-01-30 19:00:43 (14092): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-01-30 19:00:43 (14092): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-01-30 19:00:43 (14092): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-01-30 19:00:43 (14092): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-01-30 19:00:44 (14092): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-01-30 19:00:44 (14092): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-01-30 19:00:44 (14092): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-01-30 19:00:44 (14092): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-01-30 19:00:44 (14092): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-01-30 19:00:44 (14092): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-01-30 19:00:44 (14092): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-01-30 19:00:44 (14092): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-01-30 19:00:44 (14092): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-01-30 19:00:44 (14092): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-01-30 19:00:44 (14092): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-01-30 19:00:44 (14092): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-01-30 19:00:44 (14092): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-01-30 19:00:54 (14092): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-01-30 19:00:54 (14092): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-01-30 19:01:07 (14092): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-01-30 19:01:07 (14092): Guest Log: 00:00:00.000293 main     Log opened 2025-01-30T19:01:04.258413000Z
2025-01-30 19:01:07 (14092): Guest Log: 00:00:00.000498 main     OS Product: Linux
2025-01-30 19:01:07 (14092): Guest Log: 00:00:00.000551 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-01-30 19:01:07 (14092): Guest Log: 00:00:00.000576 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-01-30 19:01:07 (14092): Guest Log: 00:00:00.000596 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-01-30 19:01:07 (14092): Guest Log: 00:00:00.000597 main     Process ID: 1315
2025-01-30 19:01:07 (14092): Guest Log: 00:00:00.000597 main     Package type: LINUX_64BITS_GENERIC
2025-01-30 19:01:07 (14092): Guest Log: 00:00:00.002291 main     5.2.32 r132073 started. Verbose level = 0
2025-01-30 19:01:07 (14092): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-01-30 19:01:07 (14092): Guest Log: [INFO] Mounting shared directory
2025-01-30 19:01:08 (14092): Guest Log: [INFO] Checking for init_data.xml
2025-01-30 19:01:10 (14092): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-01-30 19:01:10 (14092): Guest Log: [INFO] Detected branch: prod
2025-01-30 19:01:11 (14092): Guest Log: This is the prod version of the ATLAS job wrapper
2025-01-30 19:01:11 (14092): Guest Log: Copying input files
2025-01-30 19:01:13 (14092): Guest Log: Copied input files into RunAtlas.
2025-01-30 19:01:13 (14092): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-01-30 19:01:13 (14092): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-01-30 19:01:13 (14092): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-01-30 19:01:13 (14092): Guest Log: Further information can be found at the LHC@home message board.
2025-01-30 19:01:17 (14092): Guest Log: 00:00:10.035988 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 587 713 816 000ns (GuestNow=1 738 260 076 553 106 000 ns GuestLast=1 738 263 664 266 922 000 ns fSetTimeLastLoop=true )
2025-01-30 19:01:21 (14092): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-01-30 19:01:21 (14092): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-01-30 19:01:21 (14092): Guest Log: 2.6.3.0 1586 0 32008 142144 4 1 3117296 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-01-30 19:01:27 (14092): Guest Log: copied the webapp to /var/www
2025-01-30 19:01:27 (14092): Guest Log: ATHENA_PROC_NUMBER=3
2025-01-30 19:01:27 (14092): Guest Log: ATHENA_CORE_NUMBER=3
2025-01-30 19:01:28 (14092): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-01-30 19:01:28 (14092): Guest Log:  *** Starting ATLAS job. (PandaID=6494557472 taskID=43092775) ***
2025-01-30 19:21:47 (14092): VM state change detected. (old = 'running', new = 'paused')
2025-01-30 19:42:55 (14092): VM state change detected. (old = 'paused', new = 'running')
2025-01-30 20:24:39 (14092): VM state change detected. (old = 'running', new = 'paused')
2025-01-30 20:24:59 (14092): VM state change detected. (old = 'paused', new = 'running')
2025-01-30 21:02:16 (14092): Status Report: Elapsed Time: '6000.000000'
2025-01-30 21:02:16 (14092): Status Report: CPU Time: '11226.468750'
2025-01-30 22:42:23 (14092): Status Report: Elapsed Time: '12000.000000'
2025-01-30 22:42:23 (14092): Status Report: CPU Time: '24766.859375'
2025-01-31 00:22:30 (14092): Status Report: Elapsed Time: '18000.000000'
2025-01-31 00:22:30 (14092): Status Report: CPU Time: '38310.484375'
2025-01-31 02:02:36 (14092): Status Report: Elapsed Time: '24000.000000'
2025-01-31 02:02:36 (14092): Status Report: CPU Time: '51850.437500'
2025-01-31 03:34:57 (14092): VM state change detected. (old = 'running', new = 'paused')
2025-01-31 03:35:17 (14092): VM state change detected. (old = 'paused', new = 'running')
2025-01-31 03:43:11 (14092): Status Report: Elapsed Time: '30000.000000'
2025-01-31 03:43:11 (14092): Status Report: CPU Time: '65406.265625'
2025-01-31 05:23:18 (14092): Status Report: Elapsed Time: '36000.000000'
2025-01-31 05:23:18 (14092): Status Report: CPU Time: '78949.531250'
2025-01-31 06:41:36 (14092): Guest Log:  *** Job finished ***
2025-01-31 06:41:36 (14092): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-01-31 06:41:36 (14092): Guest Log: 2025-01-31 05:41:02,916 | INFO     | [payload] validate_pre thread has finished
2025-01-31 06:41:36 (14092): Guest Log: 2025-01-31 05:41:02,917 | INFO     | [payload] execute_payloads thread has finished
2025-01-31 06:41:36 (14092): Guest Log: 2025-01-31 05:41:04,683 | INFO     | [data] queue_monitor thread has finished
2025-01-31 06:41:36 (14092): Guest Log: 2025-01-31 05:41:06,483 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140130873833280)>', '<ExcThread(monitor, started 140129993737984)>']
2025-01-31 06:41:36 (14092): Guest Log: 2025-01-31 05:41:06,685 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-01-31 06:41:36 (14092): Guest Log: 2025-01-31 05:41:06,685 | INFO     | [monitor] control thread has ended
2025-01-31 06:41:36 (14092): Guest Log: 2025-01-31 05:41:11,489 | INFO     | all workflow threads have been joined
2025-01-31 06:41:36 (14092): Guest Log: 2025-01-31 05:41:11,489 | INFO     | end of generic workflow (traces error code: 0)
2025-01-31 06:41:36 (14092): Guest Log: 2025-01-31 05:41:11,489 | INFO     | traces error code: 0
2025-01-31 06:41:36 (14092): Guest Log: 2025-01-31 05:41:11,489 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-01-31 06:41:36 (14092): Guest Log: 2025-01-31 05:41:11,754 [wrapper] ==== pilot stdout END ====
2025-01-31 06:41:36 (14092): Guest Log: 2025-01-31 05:41:11,759 [wrapper] ==== wrapper stdout RESUME ====
2025-01-31 06:41:36 (14092): Guest Log: 2025-01-31 05:41:11,764 [wrapper] pilotpid: 5883
2025-01-31 06:41:36 (14092): Guest Log: 2025-01-31 05:41:11,769 [wrapper] Pilot exit status: 0
2025-01-31 06:41:36 (14092): Guest Log: 2025-01-31 05:41:11,839 [wrapper] pandaids: 6494557472
2025-01-31 06:41:36 (14092): Guest Log: 2025-01-31 05:41:11,888 [wrapper] cleanup supervisor_pilot 23743 5884
2025-01-31 06:41:36 (14092): Guest Log: 2025-01-31 05:41:11,896 [wrapper] Test setup, not cleaning
2025-01-31 06:41:36 (14092): Guest Log: 2025-01-31 05:41:11,906 [wrapper] apfmon messages muted
2025-01-31 06:41:36 (14092): Guest Log: 2025-01-31 05:41:11,911 [wrapper] ==== wrapper stdout END ====
2025-01-31 06:41:36 (14092): Guest Log: 2025-01-31 05:41:11,916 [wrapper] ==== wrapper stderr END ====
2025-01-31 06:41:36 (14092): Guest Log:  *** Error codes and diagnostics ***
2025-01-31 06:41:36 (14092): Guest Log:     "exeErrorCode": 0,
2025-01-31 06:41:36 (14092): Guest Log:     "exeErrorDiag": "",
2025-01-31 06:41:36 (14092): Guest Log:     "pilotErrorCode": 0,
2025-01-31 06:41:36 (14092): Guest Log:     "pilotErrorDiag": "",
2025-01-31 06:41:36 (14092): Guest Log:  *** Listing of results directory ***
2025-01-31 06:41:36 (14092): Guest Log: total 351224
2025-01-31 06:41:36 (14092): Guest Log: -rw-r--r--. 1 atlas atlas    491065 Jan 30 04:18 pilot3.tar.gz
2025-01-31 06:41:36 (14092): Guest Log: -rw-r--r--. 1 atlas atlas      5117 Jan 30 04:32 queuedata.json
2025-01-31 06:41:36 (14092): Guest Log: -rwx------. 1 atlas atlas     34924 Jan 30 04:33 runpilot2-wrapper.sh
2025-01-31 06:41:36 (14092): Guest Log: -rwxr-xr-x. 1 atlas atlas     12507 Jan 30 18:01 init_data.xml
2025-01-31 06:41:36 (14092): Guest Log: -rwxr-xr-x. 1 atlas atlas    503494 Jan 30 18:01 input.tar.gz
2025-01-31 06:41:36 (14092): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Jan 30 18:01 start_atlas.sh
2025-01-31 06:41:36 (14092): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jan 30 18:01 EVNT.43092773._000170.pool.root.1 -> /data/./ATLAS.root_0
2025-01-31 06:41:36 (14092): Guest Log: -rw-r--r--. 1 atlas atlas      2524 Jan 30 18:01 pandaJob.out
2025-01-31 06:41:36 (14092): Guest Log: -rw-------. 1 atlas atlas       424 Jan 30 18:01 setup.sh.local
2025-01-31 06:41:36 (14092): Guest Log: -rw-------. 1 atlas atlas    968291 Jan 30 18:02 agis_schedconf.cvmfs.json
2025-01-31 06:41:36 (14092): Guest Log: drwx------. 4 atlas atlas      4096 Jan 30 18:02 pilot3
2025-01-31 06:41:36 (14092): Guest Log: -rw-------. 1 atlas atlas 346670386 Jan 31 05:39 HITS.43092775._004230.pool.root.1
2025-01-31 06:41:36 (14092): Guest Log: -rw-------. 1 atlas atlas        97 Jan 31 05:40 pilot_heartbeat.json
2025-01-31 06:41:36 (14092): Guest Log: -rw-------. 1 atlas atlas      1022 Jan 31 05:40 memory_monitor_summary.json
2025-01-31 06:41:36 (14092): Guest Log: -rw-------. 1 atlas atlas   1580185 Jan 31 05:40 agis_ddmendpoints.agis.ALL.json
2025-01-31 06:41:36 (14092): Guest Log: -rw-------. 1 atlas atlas    553723 Jan 31 05:40 log.43092775._004230.job.log.tgz.1
2025-01-31 06:41:36 (14092): Guest Log: -rw-------. 1 atlas atlas      7721 Jan 31 05:40 heartbeat.json
2025-01-31 06:41:36 (14092): Guest Log: -rw-------. 1 atlas atlas      4398 Jan 31 05:41 pilotlog.txt
2025-01-31 06:41:36 (14092): Guest Log: -rw-------. 1 atlas atlas   4078166 Jan 31 05:41 log.43092775._004230.job.log.1
2025-01-31 06:41:36 (14092): Guest Log: -rw-------. 1 atlas atlas       357 Jan 31 05:41 output.list
2025-01-31 06:41:36 (14092): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jan 31 05:41 runtime_log
2025-01-31 06:41:36 (14092): Guest Log: -rw-------. 1 atlas atlas   4648960 Jan 31 05:41 result.tar.gz
2025-01-31 06:41:36 (14092): Guest Log: -rw-r--r--. 1 atlas atlas     10936 Jan 31 05:41 runtime_log.err
2025-01-31 06:41:36 (14092): Guest Log: -rw-------. 1 atlas atlas       659 Jan 31 05:41 RoIODmKQbx6n9Rq4apOajLDm4fhM0noT9bVoFjIUDmjwIKDm9y49on.diag
2025-01-31 06:41:36 (14092): Guest Log: Looking for outputfile HITS.43092775._004230.pool.root.1
2025-01-31 06:41:36 (14092): Guest Log: HITS file was successfully produced
2025-01-31 06:41:36 (14092): Guest Log: -rw-------. 1 atlas atlas 346670386 Jan 31 05:39 /home/atlas/RunAtlas/HITS.43092775._004230.pool.root.1
2025-01-31 06:41:38 (14092): Guest Log: Successfully finished the ATLAS job!
2025-01-31 06:41:38 (14092): Guest Log: Copying the results back to the shared directory!
2025-01-31 06:41:38 (14092): Guest Log:  *** Contents of shared directory: ***
2025-01-31 06:41:38 (14092): Guest Log: total 679816
2025-01-31 06:41:38 (14092): Guest Log: -rwxrwxrwx. 1 root root 344265754 Jan 30 18:00 ATLAS.root_0
2025-01-31 06:41:38 (14092): Guest Log: -rwxrwxrwx. 1 root root 346670386 Jan 31  2025 HITS.pool.root.1
2025-01-31 06:41:38 (14092): Guest Log: -rwxrwxrwx. 1 root root     12507 Jan 30 18:00 init_data.xml
2025-01-31 06:41:38 (14092): Guest Log: -rwxrwxrwx. 1 root root    503494 Jan 30 07:51 input.tar.gz
2025-01-31 06:41:38 (14092): Guest Log: -rwxrwxrwx. 1 root root   4648960 Jan 31  2025 result.tar.gz
2025-01-31 06:41:38 (14092): Guest Log: -rwxrwxrwx. 1 root root     17569 Jan 30 07:51 start_atlas.sh
2025-01-31 06:41:38 (14092): Guest Log:  *** Success! Shutting down the machine. ***
2025-01-31 06:41:38 (14092): VM Completion File Detected.
2025-01-31 06:41:38 (14092): Powering off VM.
2025-01-31 06:41:38 (14092): Successfully stopped VM.
2025-01-31 06:41:38 (14092): Deregistering VM. (boinc_40ff0462dbc40b26, slot#6)
2025-01-31 06:41:38 (14092): Removing network bandwidth throttle group from VM.
2025-01-31 06:41:39 (14092): Removing VM from VirtualBox.
06:41:44 (14092): called boinc_finish(0)

</stderr_txt>
]]>

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