Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-02-02 11:30:08 (22376): Detected: vboxwrapper 26206
2025-02-02 11:30:08 (22376): Detected: BOINC client v8.0.2
2025-02-02 11:30:08 (22376): Detected: VirtualBox VboxManage Interface (Version: 6.1.12)
2025-02-02 11:30:09 (22376): Successfully copied 'init_data.xml' to the shared directory.
2025-02-02 11:30:09 (22376): Create VM. (boinc_42bd21c976ea46b0, slot#7)
2025-02-02 11:30:10 (22376): Setting Memory Size for VM. (4200MB)
2025-02-02 11:30:10 (22376): Setting CPU Count for VM. (2)
2025-02-02 11:30:10 (22376): Setting Chipset Options for VM.
2025-02-02 11:30:10 (22376): Setting Graphics Controller Options for VM.
2025-02-02 11:30:11 (22376): Setting Boot Options for VM.
2025-02-02 11:30:11 (22376): Setting Network Configuration for NAT.
2025-02-02 11:30:11 (22376): Enabling VM Network Access.
2025-02-02 11:30:11 (22376): Disabling USB Support for VM.
2025-02-02 11:30:12 (22376): Disabling COM Port Support for VM.
2025-02-02 11:30:12 (22376): Disabling LPT Port Support for VM.
2025-02-02 11:30:12 (22376): Disabling Audio Support for VM.
2025-02-02 11:30:12 (22376): Disabling Clipboard Support for VM.
2025-02-02 11:30:13 (22376): Disabling Drag and Drop Support for VM.
2025-02-02 11:30:13 (22376): Adding storage controller(s) to VM.
2025-02-02 11:30:13 (22376): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-02-02 11:30:14 (22376): Adding VirtualBox Guest Additions to VM.
2025-02-02 11:30:14 (22376): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-02-02 11:30:14 (22376): forwarding host port 50062 to guest port 80
2025-02-02 11:30:14 (22376): Enabling remote desktop for VM.
2025-02-02 11:30:15 (22376): Required extension pack not installed, remote desktop not enabled.
2025-02-02 11:30:15 (22376): Enabling shared directory for VM.
2025-02-02 11:30:15 (22376): Starting VM using VBoxManage interface. (boinc_42bd21c976ea46b0, slot#7)
2025-02-02 11:30:19 (22376): Successfully started VM. (PID = '12164')
2025-02-02 11:30:19 (22376): Reporting VM Process ID to BOINC.
2025-02-02 11:30:19 (22376): Guest Log: BIOS: VirtualBox 6.1.12
2025-02-02 11:30:19 (22376): Guest Log: CPUID EDX: 0x178bfbff
2025-02-02 11:30:19 (22376): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-02-02 11:30:19 (22376): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-02-02 11:30:19 (22376): VM state change detected. (old = 'poweredoff', new = 'running')
2025-02-02 11:30:19 (22376): Detected: Web Application Enabled (http://localhost:50062)
2025-02-02 11:30:19 (22376): Preference change detected
2025-02-02 11:30:19 (22376): Setting CPU throttle for VM. (60%)
2025-02-02 11:30:19 (22376): Setting checkpoint interval to 18000 seconds. (Higher value of (Preference: 18000 seconds) or (Vbox_job.xml: 900 seconds))
2025-02-02 11:30:21 (22376): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-02-02 11:30:21 (22376): Guest Log: BIOS: Booting from Hard Disk...
2025-02-02 11:30:26 (22376): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-02-02 11:30:26 (22376): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-02-02 11:30:26 (22376): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-02-02 11:30:26 (22376): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-02-02 11:30:26 (22376): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-02-02 11:30:26 (22376): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-02-02 11:30:26 (22376): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-02-02 11:30:26 (22376): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-02-02 11:30:26 (22376): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-02-02 11:30:26 (22376): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-02-02 11:30:26 (22376): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-02-02 11:30:26 (22376): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-02-02 11:30:26 (22376): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-02-02 11:30:26 (22376): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-02-02 11:30:26 (22376): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-02-02 11:30:26 (22376): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-02-02 11:30:26 (22376): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-02-02 11:30:26 (22376): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-02-02 11:30:26 (22376): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-02-02 11:30:26 (22376): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-02-02 11:30:26 (22376): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-02-02 11:30:26 (22376): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-02-02 11:30:26 (22376): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-02-02 11:30:26 (22376): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-02-02 11:30:26 (22376): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-02-02 11:30:26 (22376): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-02-02 11:30:26 (22376): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-02-02 11:30:26 (22376): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-02-02 11:30:26 (22376): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-02-02 11:30:26 (22376): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-02-02 11:30:26 (22376): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-02-02 11:30:26 (22376): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-02-02 11:30:32 (22376): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-02-02 11:30:32 (22376): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-02-02 11:30:41 (22376): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-02-02 11:30:41 (22376): Guest Log: 00:00:00.000118 main     Log opened 2025-02-02T11:30:40.007368000Z
2025-02-02 11:30:41 (22376): Guest Log: 00:00:00.000187 main     OS Product: Linux
2025-02-02 11:30:41 (22376): Guest Log: 00:00:00.000222 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-02-02 11:30:41 (22376): Guest Log: 00:00:00.000243 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-02-02 11:30:41 (22376): Guest Log: 00:00:00.000288 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-02-02 11:30:41 (22376): Guest Log: 00:00:00.000288 main     Process ID: 1261
2025-02-02 11:30:41 (22376): Guest Log: 00:00:00.000289 main     Package type: LINUX_64BITS_GENERIC
2025-02-02 11:30:41 (22376): Guest Log: 00:00:00.000772 main     5.2.32 r132073 started. Verbose level = 0
2025-02-02 11:30:41 (22376): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-02-02 11:30:41 (22376): Guest Log: [INFO] Mounting shared directory
2025-02-02 11:30:41 (22376): Guest Log: [INFO] Checking for init_data.xml
2025-02-02 11:30:52 (22376): Guest Log: 00:00:10.132557 timesync vgsvcTimeSyncWorker: Radical guest time change: -46 788 540 783 000ns (GuestNow=1 738 449 051 470 490 000 ns GuestLast=1 738 495 840 011 273 000 ns fSetTimeLastLoop=true )
2025-02-02 11:31:01 (22376): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-02-02 11:31:01 (22376): Guest Log: [INFO] Detected branch: prod
2025-02-02 11:31:01 (22376): Guest Log: This is the prod version of the ATLAS job wrapper
2025-02-02 11:31:01 (22376): Guest Log: Copying input files
2025-02-02 11:31:04 (22376): Guest Log: Copied input files into RunAtlas.
2025-02-02 11:31:04 (22376): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-02-02 11:31:04 (22376): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-02-02 11:31:04 (22376): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-02-02 11:31:04 (22376): Guest Log: Further information can be found at the LHC@home message board.
2025-02-02 11:31:15 (22376): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-02-02 11:31:15 (22376): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-02-02 11:31:15 (22376): Guest Log: 2.6.3.0 1539 0 32164 142186 4 1 3117296 4096000 0 65024 0 0 n/a 0 0 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-02-02 11:31:17 (22376): Guest Log: copied the webapp to /var/www
2025-02-02 11:31:17 (22376): Guest Log: ATHENA_PROC_NUMBER=2
2025-02-02 11:31:17 (22376): Guest Log: ATHENA_CORE_NUMBER=2
2025-02-02 11:31:17 (22376): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-02-02 11:31:17 (22376): Guest Log:  *** Starting ATLAS job. (PandaID=6494364678 taskID=43092775) ***
2025-02-02 13:10:23 (22376): Status Report: Elapsed Time: '6000.000000'
2025-02-02 13:10:23 (22376): Status Report: CPU Time: '5958.890625'
2025-02-02 14:50:27 (22376): Status Report: Elapsed Time: '12000.000000'
2025-02-02 14:50:27 (22376): Status Report: CPU Time: '13200.828125'
2025-02-02 16:30:30 (22376): Status Report: Elapsed Time: '18000.000000'
2025-02-02 16:30:30 (22376): Status Report: CPU Time: '20452.140625'
2025-02-02 18:10:32 (22376): Status Report: Elapsed Time: '24000.000000'
2025-02-02 18:10:32 (22376): Status Report: CPU Time: '27719.671875'
2025-02-02 19:50:36 (22376): Status Report: Elapsed Time: '30000.000000'
2025-02-02 19:50:36 (22376): Status Report: CPU Time: '34969.953125'
2025-02-02 21:30:39 (22376): Status Report: Elapsed Time: '36000.000000'
2025-02-02 21:30:39 (22376): Status Report: CPU Time: '42219.468750'
2025-02-02 23:10:43 (22376): Status Report: Elapsed Time: '42000.000000'
2025-02-02 23:10:43 (22376): Status Report: CPU Time: '49469.296875'
2025-02-03 00:50:47 (22376): Status Report: Elapsed Time: '48000.000000'
2025-02-03 00:50:47 (22376): Status Report: CPU Time: '56719.375000'
2025-02-03 02:30:50 (22376): Status Report: Elapsed Time: '54000.000000'
2025-02-03 02:30:50 (22376): Status Report: CPU Time: '63966.781250'
2025-02-03 02:35:52 (22376): Guest Log:  *** Job finished ***
2025-02-03 02:35:52 (22376): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-02-03 02:35:52 (22376): Guest Log: 2025-02-02 13:35:40,525 | INFO     | [data] copytool_out thread has finished
2025-02-03 02:35:52 (22376): Guest Log: 2025-02-02 13:35:41,248 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
2025-02-03 02:35:52 (22376): Guest Log: 2025-02-02 13:35:45,252 | INFO     | [data] queue_monitor thread has finished
2025-02-03 02:35:52 (22376): Guest Log: 2025-02-02 13:35:46,039 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139842082010944)>', '<ExcThread(monitor, started 139841484338944)>']
2025-02-03 02:35:52 (22376): Guest Log: 2025-02-02 13:35:46,104 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-02-03 02:35:52 (22376): Guest Log: 2025-02-02 13:35:46,105 | INFO     | [monitor] control thread has ended
2025-02-03 02:35:52 (22376): Guest Log: 2025-02-02 13:35:51,045 | INFO     | all workflow threads have been joined
2025-02-03 02:35:52 (22376): Guest Log: 2025-02-02 13:35:51,045 | INFO     | end of generic workflow (traces error code: 0)
2025-02-03 02:35:52 (22376): Guest Log: 2025-02-02 13:35:51,045 | INFO     | traces error code: 0
2025-02-03 02:35:52 (22376): Guest Log: 2025-02-02 13:35:51,045 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-02-03 02:35:52 (22376): Guest Log: 2025-02-02 13:35:51,127 [wrapper] ==== pilot stdout END ====
2025-02-03 02:35:52 (22376): Guest Log: 2025-02-02 13:35:51,131 [wrapper] ==== wrapper stdout RESUME ====
2025-02-03 02:35:52 (22376): Guest Log: 2025-02-02 13:35:51,135 [wrapper] pilotpid: 5866
2025-02-03 02:35:52 (22376): Guest Log: 2025-02-02 13:35:51,139 [wrapper] Pilot exit status: 0
2025-02-03 02:35:52 (22376): Guest Log: 2025-02-02 13:35:51,202 [wrapper] pandaids: 6494364678
2025-02-03 02:35:52 (22376): Guest Log: 2025-02-02 13:35:51,235 [wrapper] cleanup supervisor_pilot  6089 5867
2025-02-03 02:35:52 (22376): Guest Log: 2025-02-02 13:35:51,244 [wrapper] Test setup, not cleaning
2025-02-03 02:35:52 (22376): Guest Log: 2025-02-02 13:35:51,255 [wrapper] apfmon messages muted
2025-02-03 02:35:52 (22376): Guest Log: 2025-02-02 13:35:51,266 [wrapper] ==== wrapper stdout END ====
2025-02-03 02:35:52 (22376): Guest Log: 2025-02-02 13:35:51,270 [wrapper] ==== wrapper stderr END ====
2025-02-03 02:35:52 (22376): Guest Log:  *** Error codes and diagnostics ***
2025-02-03 02:35:52 (22376): Guest Log:     "exeErrorCode": 0,
2025-02-03 02:35:52 (22376): Guest Log:     "exeErrorDiag": "",
2025-02-03 02:35:52 (22376): Guest Log:     "pilotErrorCode": 0,
2025-02-03 02:35:52 (22376): Guest Log:     "pilotErrorDiag": "",
2025-02-03 02:35:52 (22376): Guest Log:  *** Listing of results directory ***
2025-02-03 02:35:52 (22376): Guest Log: total 357492
2025-02-03 02:35:52 (22376): Guest Log: -rw-r--r--. 1 atlas atlas    491065 Jan 30 00:06 pilot3.tar.gz
2025-02-03 02:35:52 (22376): Guest Log: -rw-r--r--. 1 atlas atlas      5117 Jan 30 00:27 queuedata.json
2025-02-03 02:35:52 (22376): Guest Log: -rwx------. 1 atlas atlas     34924 Jan 30 00:28 runpilot2-wrapper.sh
2025-02-03 02:35:52 (22376): Guest Log: -rwxr-xr-x. 1 atlas atlas      9474 Feb  1 22:31 init_data.xml
2025-02-03 02:35:52 (22376): Guest Log: -rwxr-xr-x. 1 atlas atlas    503485 Feb  1 22:31 input.tar.gz
2025-02-03 02:35:52 (22376): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Feb  1 22:31 start_atlas.sh
2025-02-03 02:35:52 (22376): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb  1 22:31 EVNT.43092773._000090.pool.root.1 -> /data/./ATLAS.root_0
2025-02-03 02:35:52 (22376): Guest Log: -rw-r--r--. 1 atlas atlas      2525 Feb  1 22:31 pandaJob.out
2025-02-03 02:35:52 (22376): Guest Log: -rw-------. 1 atlas atlas       424 Feb  1 22:31 setup.sh.local
2025-02-03 02:35:52 (22376): Guest Log: -rw-------. 1 atlas atlas    969306 Feb  1 22:32 agis_schedconf.cvmfs.json
2025-02-03 02:35:52 (22376): Guest Log: drwx------. 4 atlas atlas      4096 Feb  1 22:32 pilot3
2025-02-03 02:35:52 (22376): Guest Log: -rw-------. 1 atlas atlas 347584792 Feb  2 13:34 HITS.43092775._002247.pool.root.1
2025-02-03 02:35:52 (22376): Guest Log: -rw-------. 1 atlas atlas      1026 Feb  2 13:35 memory_monitor_summary.json
2025-02-03 02:35:52 (22376): Guest Log: -rw-------. 1 atlas atlas        95 Feb  2 13:35 pilot_heartbeat.json
2025-02-03 02:35:52 (22376): Guest Log: -rw-------. 1 atlas atlas   1580185 Feb  2 13:35 agis_ddmendpoints.agis.ALL.json
2025-02-03 02:35:52 (22376): Guest Log: -rw-------. 1 atlas atlas    744692 Feb  2 13:35 log.43092775._002247.job.log.tgz.1
2025-02-03 02:35:52 (22376): Guest Log: -rw-------. 1 atlas atlas      7738 Feb  2 13:35 heartbeat.json
2025-02-03 02:35:52 (22376): Guest Log: -rw-------. 1 atlas atlas      4398 Feb  2 13:35 pilotlog.txt
2025-02-03 02:35:52 (22376): Guest Log: -rw-------. 1 atlas atlas   6642531 Feb  2 13:35 log.43092775._002247.job.log.1
2025-02-03 02:35:52 (22376): Guest Log: -rw-------. 1 atlas atlas       357 Feb  2 13:35 output.list
2025-02-03 02:35:52 (22376): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb  2 13:35 runtime_log
2025-02-03 02:35:52 (22376): Guest Log: -rw-------. 1 atlas atlas   7403520 Feb  2 13:35 result.tar.gz
2025-02-03 02:35:52 (22376): Guest Log: -rw-r--r--. 1 atlas atlas     10936 Feb  2 13:35 runtime_log.err
2025-02-03 02:35:52 (22376): Guest Log: -rw-------. 1 atlas atlas       660 Feb  2 13:35 6f1NDmObXx6n9Rq4apOajLDm4fhM0noT9bVoFjIUDmMgIKDmoVlPDn.diag
2025-02-03 02:35:52 (22376): Guest Log: Looking for outputfile HITS.43092775._002247.pool.root.1
2025-02-03 02:35:52 (22376): Guest Log: HITS file was successfully produced
2025-02-03 02:35:52 (22376): Guest Log: -rw-------. 1 atlas atlas 347584792 Feb  2 13:34 /home/atlas/RunAtlas/HITS.43092775._002247.pool.root.1
2025-02-03 02:35:55 (22376): Guest Log: Successfully finished the ATLAS job!
2025-02-03 02:35:55 (22376): Guest Log: Copying the results back to the shared directory!
2025-02-03 02:35:55 (22376): Guest Log:  *** Contents of shared directory: ***
2025-02-03 02:35:55 (22376): Guest Log: total 687908
2025-02-03 02:35:55 (22376): Guest Log: -rwxrwxrwx. 1 root root 348888196 Feb  1 22:30 ATLAS.root_0
2025-02-03 02:35:55 (22376): Guest Log: -rwxrwxrwx. 1 root root 347584792 Feb  2 13:35 HITS.pool.root.1
2025-02-03 02:35:55 (22376): Guest Log: -rwxrwxrwx. 1 root root      9474 Feb  1 22:30 init_data.xml
2025-02-03 02:35:55 (22376): Guest Log: -rwxrwxrwx. 1 root root    503485 Jan 30 03:35 input.tar.gz
2025-02-03 02:35:55 (22376): Guest Log: -rwxrwxrwx. 1 root root   7403520 Feb  2 13:35 result.tar.gz
2025-02-03 02:35:55 (22376): Guest Log: -rwxrwxrwx. 1 root root     17569 Jan 30 03:35 start_atlas.sh
2025-02-03 02:35:55 (22376): Guest Log:  *** Success! Shutting down the machine. ***
2025-02-03 02:35:55 (22376): VM Completion File Detected.
2025-02-03 02:35:55 (22376): Powering off VM.
2025-02-03 02:35:56 (22376): Successfully stopped VM.
2025-02-03 02:35:56 (22376): Deregistering VM. (boinc_42bd21c976ea46b0, slot#7)
2025-02-03 02:35:56 (22376): Removing network bandwidth throttle group from VM.
2025-02-03 02:35:56 (22376): Removing VM from VirtualBox.
02:36:01 (22376): called boinc_finish(0)

</stderr_txt>
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