Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-02-02 07:15:49 (6692): Detected: vboxwrapper 26206
2025-02-02 07:15:49 (6692): Detected: BOINC client v8.0.2
2025-02-02 07:15:49 (6692): Detected: VirtualBox VboxManage Interface (Version: 6.1.12)
2025-02-02 07:15:50 (6692): Successfully copied 'init_data.xml' to the shared directory.
2025-02-02 07:15:50 (6692): Create VM. (boinc_e7f03e518cecbc22, slot#8)
2025-02-02 07:15:51 (6692): Setting Memory Size for VM. (4200MB)
2025-02-02 07:15:51 (6692): Setting CPU Count for VM. (2)
2025-02-02 07:15:51 (6692): Setting Chipset Options for VM.
2025-02-02 07:15:51 (6692): Setting Graphics Controller Options for VM.
2025-02-02 07:15:52 (6692): Setting Boot Options for VM.
2025-02-02 07:15:52 (6692): Setting Network Configuration for NAT.
2025-02-02 07:15:52 (6692): Enabling VM Network Access.
2025-02-02 07:15:52 (6692): Disabling USB Support for VM.
2025-02-02 07:15:53 (6692): Disabling COM Port Support for VM.
2025-02-02 07:15:53 (6692): Disabling LPT Port Support for VM.
2025-02-02 07:15:53 (6692): Disabling Audio Support for VM.
2025-02-02 07:15:53 (6692): Disabling Clipboard Support for VM.
2025-02-02 07:15:54 (6692): Disabling Drag and Drop Support for VM.
2025-02-02 07:15:54 (6692): Adding storage controller(s) to VM.
2025-02-02 07:15:54 (6692): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-02-02 07:15:55 (6692): Adding VirtualBox Guest Additions to VM.
2025-02-02 07:15:55 (6692): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-02-02 07:15:55 (6692): forwarding host port 61288 to guest port 80
2025-02-02 07:15:55 (6692): Enabling remote desktop for VM.
2025-02-02 07:15:56 (6692): Required extension pack not installed, remote desktop not enabled.
2025-02-02 07:15:56 (6692): Enabling shared directory for VM.
2025-02-02 07:15:56 (6692): Starting VM using VBoxManage interface. (boinc_e7f03e518cecbc22, slot#8)
2025-02-02 07:16:00 (6692): Successfully started VM. (PID = '21408')
2025-02-02 07:16:00 (6692): Reporting VM Process ID to BOINC.
2025-02-02 07:16:00 (6692): Guest Log: BIOS: VirtualBox 6.1.12
2025-02-02 07:16:00 (6692): Guest Log: CPUID EDX: 0x178bfbff
2025-02-02 07:16:00 (6692): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-02-02 07:16:00 (6692): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-02-02 07:16:00 (6692): VM state change detected. (old = 'poweredoff', new = 'running')
2025-02-02 07:16:00 (6692): Detected: Web Application Enabled (http://localhost:61288)
2025-02-02 07:16:00 (6692): Preference change detected
2025-02-02 07:16:00 (6692): Setting CPU throttle for VM. (60%)
2025-02-02 07:16:00 (6692): Setting checkpoint interval to 18000 seconds. (Higher value of (Preference: 18000 seconds) or (Vbox_job.xml: 900 seconds))
2025-02-02 07:16:02 (6692): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-02-02 07:16:02 (6692): Guest Log: BIOS: Booting from Hard Disk...
2025-02-02 07:16:06 (6692): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-02-02 07:16:06 (6692): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-02-02 07:16:06 (6692): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-02-02 07:16:06 (6692): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-02-02 07:16:06 (6692): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-02-02 07:16:06 (6692): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-02-02 07:16:06 (6692): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-02-02 07:16:06 (6692): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-02-02 07:16:06 (6692): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-02-02 07:16:06 (6692): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-02-02 07:16:06 (6692): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-02-02 07:16:06 (6692): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-02-02 07:16:06 (6692): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-02-02 07:16:06 (6692): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-02-02 07:16:06 (6692): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-02-02 07:16:06 (6692): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-02-02 07:16:06 (6692): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-02-02 07:16:06 (6692): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-02-02 07:16:06 (6692): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-02-02 07:16:06 (6692): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-02-02 07:16:06 (6692): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-02-02 07:16:06 (6692): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-02-02 07:16:06 (6692): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-02-02 07:16:06 (6692): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-02-02 07:16:06 (6692): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-02-02 07:16:06 (6692): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-02-02 07:16:06 (6692): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-02-02 07:16:06 (6692): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-02-02 07:16:06 (6692): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-02-02 07:16:06 (6692): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-02-02 07:16:06 (6692): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-02-02 07:16:06 (6692): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-02-02 07:16:12 (6692): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-02-02 07:16:12 (6692): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-02-02 07:16:21 (6692): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-02-02 07:16:21 (6692): Guest Log: 00:00:00.000137 main     Log opened 2025-02-02T07:16:18.925259000Z
2025-02-02 07:16:21 (6692): Guest Log: 00:00:00.000220 main     OS Product: Linux
2025-02-02 07:16:21 (6692): Guest Log: 00:00:00.000248 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-02-02 07:16:21 (6692): Guest Log: 00:00:00.000269 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-02-02 07:16:21 (6692): Guest Log: 00:00:00.000288 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-02-02 07:16:21 (6692): Guest Log: 00:00:00.000289 main     Process ID: 1263
2025-02-02 07:16:21 (6692): Guest Log: 00:00:00.000289 main     Package type: LINUX_64BITS_GENERIC
2025-02-02 07:16:21 (6692): Guest Log: 00:00:00.000801 main     5.2.32 r132073 started. Verbose level = 0
2025-02-02 07:16:21 (6692): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-02-02 07:16:21 (6692): Guest Log: [INFO] Mounting shared directory
2025-02-02 07:16:21 (6692): Guest Log: [INFO] Checking for init_data.xml
2025-02-02 07:16:31 (6692): Guest Log: 00:00:10.002740 timesync vgsvcTimeSyncWorker: Radical guest time change: -46 788 143 066 000ns (GuestNow=1 738 433 790 783 883 000 ns GuestLast=1 738 480 578 926 949 000 ns fSetTimeLastLoop=true )
2025-02-02 07:16:31 (6692): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-02-02 07:16:31 (6692): Guest Log: [INFO] Detected branch: prod
2025-02-02 07:16:31 (6692): Guest Log: This is the prod version of the ATLAS job wrapper
2025-02-02 07:16:31 (6692): Guest Log: Copying input files
2025-02-02 07:16:34 (6692): Guest Log: Copied input files into RunAtlas.
2025-02-02 07:16:34 (6692): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-02-02 07:16:34 (6692): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-02-02 07:16:34 (6692): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-02-02 07:16:34 (6692): Guest Log: Further information can be found at the LHC@home message board.
2025-02-02 07:16:46 (6692): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-02-02 07:16:46 (6692): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-02-02 07:16:46 (6692): Guest Log: 2.6.3.0 1541 0 30056 142177 4 1 3117296 4096000 0 65024 0 0 n/a 0 0 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-02-02 07:16:48 (6692): Guest Log: copied the webapp to /var/www
2025-02-02 07:16:48 (6692): Guest Log: ATHENA_PROC_NUMBER=2
2025-02-02 07:16:48 (6692): Guest Log: ATHENA_CORE_NUMBER=2
2025-02-02 07:16:48 (6692): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-02-02 07:16:48 (6692): Guest Log:  *** Starting ATLAS job. (PandaID=6494287100 taskID=43092775) ***
2025-02-02 08:56:04 (6692): Status Report: Elapsed Time: '6000.000000'
2025-02-02 08:56:04 (6692): Status Report: CPU Time: '5752.296875'
2025-02-02 10:36:08 (6692): Status Report: Elapsed Time: '12000.000000'
2025-02-02 10:36:08 (6692): Status Report: CPU Time: '12996.265625'
2025-02-02 12:16:12 (6692): Status Report: Elapsed Time: '18000.000000'
2025-02-02 12:16:12 (6692): Status Report: CPU Time: '20240.640625'
2025-02-02 13:56:16 (6692): Status Report: Elapsed Time: '24000.000000'
2025-02-02 13:56:16 (6692): Status Report: CPU Time: '27481.890625'
2025-02-02 15:36:20 (6692): Status Report: Elapsed Time: '30000.000000'
2025-02-02 15:36:20 (6692): Status Report: CPU Time: '34725.640625'
2025-02-02 17:16:22 (6692): Status Report: Elapsed Time: '36000.000000'
2025-02-02 17:16:22 (6692): Status Report: CPU Time: '41988.125000'
2025-02-02 18:56:25 (6692): Status Report: Elapsed Time: '42000.000000'
2025-02-02 18:56:25 (6692): Status Report: CPU Time: '49247.156250'
2025-02-02 20:36:29 (6692): Status Report: Elapsed Time: '48000.000000'
2025-02-02 20:36:29 (6692): Status Report: CPU Time: '56496.562500'
2025-02-02 22:16:32 (6692): Status Report: Elapsed Time: '54000.000000'
2025-02-02 22:16:32 (6692): Status Report: CPU Time: '63746.984375'
2025-02-02 22:44:13 (6692): Guest Log:  *** Job finished ***
2025-02-02 22:44:13 (6692): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-02-02 22:44:13 (6692): Guest Log: 2025-02-02 09:43:58,575 | INFO     | [data] queue_monitor thread has finished
2025-02-02 22:44:13 (6692): Guest Log: 2025-02-02 09:44:04,218 | INFO     | job.realtimelogging is not enabled
2025-02-02 22:44:13 (6692): Guest Log: 2025-02-02 09:44:05,220 | INFO     | [payload] run_realtimelog thread has finished
2025-02-02 22:44:13 (6692): Guest Log: 2025-02-02 09:44:05,947 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140380865640256)>', '<ExcThread(monitor, started 140380116866816)>']
2025-02-02 22:44:13 (6692): Guest Log: 2025-02-02 09:44:06,250 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-02-02 22:44:13 (6692): Guest Log: 2025-02-02 09:44:06,250 | INFO     | [monitor] control thread has ended
2025-02-02 22:44:13 (6692): Guest Log: 2025-02-02 09:44:10,952 | INFO     | all workflow threads have been joined
2025-02-02 22:44:13 (6692): Guest Log: 2025-02-02 09:44:10,952 | INFO     | end of generic workflow (traces error code: 0)
2025-02-02 22:44:13 (6692): Guest Log: 2025-02-02 09:44:10,952 | INFO     | traces error code: 0
2025-02-02 22:44:13 (6692): Guest Log: 2025-02-02 09:44:10,952 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-02-02 22:44:13 (6692): Guest Log: 2025-02-02 09:44:11,047 [wrapper] ==== pilot stdout END ====
2025-02-02 22:44:13 (6692): Guest Log: 2025-02-02 09:44:11,056 [wrapper] ==== wrapper stdout RESUME ====
2025-02-02 22:44:13 (6692): Guest Log: 2025-02-02 09:44:11,060 [wrapper] pilotpid: 5878
2025-02-02 22:44:13 (6692): Guest Log: 2025-02-02 09:44:11,065 [wrapper] Pilot exit status: 0
2025-02-02 22:44:13 (6692): Guest Log: 2025-02-02 09:44:11,597 [wrapper] pandaids: 6494287100
2025-02-02 22:44:13 (6692): Guest Log: 2025-02-02 09:44:11,620 [wrapper] cleanup supervisor_pilot  6457 5879
2025-02-02 22:44:13 (6692): Guest Log: 2025-02-02 09:44:11,625 [wrapper] Test setup, not cleaning
2025-02-02 22:44:13 (6692): Guest Log: 2025-02-02 09:44:11,631 [wrapper] apfmon messages muted
2025-02-02 22:44:13 (6692): Guest Log: 2025-02-02 09:44:11,634 [wrapper] ==== wrapper stdout END ====
2025-02-02 22:44:13 (6692): Guest Log: 2025-02-02 09:44:11,636 [wrapper] ==== wrapper stderr END ====
2025-02-02 22:44:13 (6692): Guest Log:  *** Error codes and diagnostics ***
2025-02-02 22:44:13 (6692): Guest Log:     "exeErrorCode": 0,
2025-02-02 22:44:13 (6692): Guest Log:     "exeErrorDiag": "",
2025-02-02 22:44:13 (6692): Guest Log:     "pilotErrorCode": 0,
2025-02-02 22:44:13 (6692): Guest Log:     "pilotErrorDiag": "",
2025-02-02 22:44:13 (6692): Guest Log:  *** Listing of results directory ***
2025-02-02 22:44:13 (6692): Guest Log: total 353736
2025-02-02 22:44:13 (6692): Guest Log: -rw-r--r--. 1 atlas atlas    491065 Jan 29 21:46 pilot3.tar.gz
2025-02-02 22:44:13 (6692): Guest Log: -rw-r--r--. 1 atlas atlas      5117 Jan 29 21:47 queuedata.json
2025-02-02 22:44:13 (6692): Guest Log: -rwx------. 1 atlas atlas     34924 Jan 29 21:49 runpilot2-wrapper.sh
2025-02-02 22:44:13 (6692): Guest Log: -rwxr-xr-x. 1 atlas atlas      9474 Feb  1 18:16 init_data.xml
2025-02-02 22:44:13 (6692): Guest Log: -rwxr-xr-x. 1 atlas atlas    503482 Feb  1 18:16 input.tar.gz
2025-02-02 22:44:13 (6692): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Feb  1 18:16 start_atlas.sh
2025-02-02 22:44:13 (6692): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb  1 18:16 EVNT.43092773._000062.pool.root.1 -> /data/./ATLAS.root_0
2025-02-02 22:44:13 (6692): Guest Log: -rw-r--r--. 1 atlas atlas      2533 Feb  1 18:16 pandaJob.out
2025-02-02 22:44:13 (6692): Guest Log: -rw-------. 1 atlas atlas       424 Feb  1 18:17 setup.sh.local
2025-02-02 22:44:13 (6692): Guest Log: -rw-------. 1 atlas atlas    969298 Feb  1 18:18 agis_schedconf.cvmfs.json
2025-02-02 22:44:13 (6692): Guest Log: drwx------. 4 atlas atlas      4096 Feb  1 18:18 pilot3
2025-02-02 22:44:13 (6692): Guest Log: -rw-------. 1 atlas atlas 343639932 Feb  2 09:42 HITS.43092775._001550.pool.root.1
2025-02-02 22:44:13 (6692): Guest Log: -rw-------. 1 atlas atlas      1028 Feb  2 09:43 memory_monitor_summary.json
2025-02-02 22:44:13 (6692): Guest Log: -rw-------. 1 atlas atlas        95 Feb  2 09:43 pilot_heartbeat.json
2025-02-02 22:44:13 (6692): Guest Log: -rw-------. 1 atlas atlas   1580185 Feb  2 09:43 agis_ddmendpoints.agis.ALL.json
2025-02-02 22:44:13 (6692): Guest Log: -rw-------. 1 atlas atlas    746588 Feb  2 09:43 log.43092775._001550.job.log.tgz.1
2025-02-02 22:44:13 (6692): Guest Log: -rw-------. 1 atlas atlas      7744 Feb  2 09:43 heartbeat.json
2025-02-02 22:44:13 (6692): Guest Log: -rw-------. 1 atlas atlas      4470 Feb  2 09:44 pilotlog.txt
2025-02-02 22:44:13 (6692): Guest Log: -rw-------. 1 atlas atlas   6686408 Feb  2 09:44 log.43092775._001550.job.log.1
2025-02-02 22:44:13 (6692): Guest Log: -rw-------. 1 atlas atlas       357 Feb  2 09:44 output.list
2025-02-02 22:44:13 (6692): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb  2 09:44 runtime_log
2025-02-02 22:44:13 (6692): Guest Log: -rw-------. 1 atlas atlas   7454720 Feb  2 09:44 result.tar.gz
2025-02-02 22:44:13 (6692): Guest Log: -rw-r--r--. 1 atlas atlas     10936 Feb  2 09:44 runtime_log.err
2025-02-02 22:44:13 (6692): Guest Log: -rw-------. 1 atlas atlas       660 Feb  2 09:44 kUKLDmQ7Ux6nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm7uJKDmHek3Oo.diag
2025-02-02 22:44:13 (6692): Guest Log: Looking for outputfile HITS.43092775._001550.pool.root.1
2025-02-02 22:44:13 (6692): Guest Log: HITS file was successfully produced
2025-02-02 22:44:13 (6692): Guest Log: -rw-------. 1 atlas atlas 343639932 Feb  2 09:42 /home/atlas/RunAtlas/HITS.43092775._001550.pool.root.1
2025-02-02 22:44:17 (6692): Guest Log: Successfully finished the ATLAS job!
2025-02-02 22:44:17 (6692): Guest Log: Copying the results back to the shared directory!
2025-02-02 22:44:17 (6692): Guest Log:  *** Contents of shared directory: ***
2025-02-02 22:44:17 (6692): Guest Log: total 679004
2025-02-02 22:44:17 (6692): Guest Log: -rwxrwxrwx. 1 root root 343666108 Feb  1 18:15 ATLAS.root_0
2025-02-02 22:44:17 (6692): Guest Log: -rwxrwxrwx. 1 root root 343639932 Feb  2 09:44 HITS.pool.root.1
2025-02-02 22:44:17 (6692): Guest Log: -rwxrwxrwx. 1 root root      9474 Feb  1 18:15 init_data.xml
2025-02-02 22:44:17 (6692): Guest Log: -rwxrwxrwx. 1 root root    503482 Jan 30 00:47 input.tar.gz
2025-02-02 22:44:17 (6692): Guest Log: -rwxrwxrwx. 1 root root   7454720 Feb  2 09:44 result.tar.gz
2025-02-02 22:44:17 (6692): Guest Log: -rwxrwxrwx. 1 root root     17569 Jan 30 00:47 start_atlas.sh
2025-02-02 22:44:17 (6692): Guest Log:  *** Success! Shutting down the machine. ***
2025-02-02 22:44:17 (6692): VM Completion File Detected.
2025-02-02 22:44:17 (6692): Powering off VM.
2025-02-02 22:44:17 (6692): Successfully stopped VM.
2025-02-02 22:44:17 (6692): Deregistering VM. (boinc_e7f03e518cecbc22, slot#8)
2025-02-02 22:44:17 (6692): Removing network bandwidth throttle group from VM.
2025-02-02 22:44:18 (6692): Removing VM from VirtualBox.
22:44:23 (6692): called boinc_finish(0)

</stderr_txt>
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