Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
2025-01-30 13:40:08 (4048902): Detected: vboxwrapper 26206
2025-01-30 13:40:08 (4048902): Detected: BOINC client v7.16.6
2025-01-30 13:40:08 (4048902): Detected: VirtualBox VboxManage Interface (Version: 6.1.50)
2025-01-30 13:40:09 (4048902): Successfully copied 'init_data.xml' to the shared directory.
2025-01-30 13:40:09 (4048902): Create VM. (boinc_d446e400755b3e11, slot#0)
2025-01-30 13:40:09 (4048902): Setting Memory Size for VM. (4800MB)
2025-01-30 13:40:09 (4048902): Setting CPU Count for VM. (8)
2025-01-30 13:40:09 (4048902): Setting Chipset Options for VM.
2025-01-30 13:40:09 (4048902): Setting Graphics Controller Options for VM.
2025-01-30 13:40:09 (4048902): Setting Boot Options for VM.
2025-01-30 13:40:10 (4048902): Setting Network Configuration for NAT.
2025-01-30 13:40:10 (4048902): Enabling VM Network Access.
2025-01-30 13:40:10 (4048902): Disabling USB Support for VM.
2025-01-30 13:40:10 (4048902): Disabling COM Port Support for VM.
2025-01-30 13:40:10 (4048902): Disabling LPT Port Support for VM.
2025-01-30 13:40:10 (4048902): Disabling Audio Support for VM.
2025-01-30 13:40:10 (4048902): Disabling Clipboard Support for VM.
2025-01-30 13:40:10 (4048902): Disabling Drag and Drop Support for VM.
2025-01-30 13:40:11 (4048902): Adding storage controller(s) to VM.
2025-01-30 13:40:11 (4048902): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-01-30 13:40:11 (4048902): Adding VirtualBox Guest Additions to VM.
2025-01-30 13:40:11 (4048902): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-01-30 13:40:11 (4048902): forwarding host port 58127 to guest port 80
2025-01-30 13:40:11 (4048902): Enabling remote desktop for VM.
2025-01-30 13:40:11 (4048902): Required extension pack not installed, remote desktop not enabled.
2025-01-30 13:40:11 (4048902): Enabling shared directory for VM.
2025-01-30 13:40:12 (4048902): Starting VM using VBoxManage interface. (boinc_d446e400755b3e11, slot#0)
2025-01-30 13:40:13 (4048902): Successfully started VM. (PID = '4049441')
2025-01-30 13:40:13 (4048902): Reporting VM Process ID to BOINC.
2025-01-30 13:40:13 (4048902): Guest Log: BIOS: VirtualBox 6.1.50
2025-01-30 13:40:13 (4048902): Guest Log: CPUID EDX: 0x178bfbff
2025-01-30 13:40:13 (4048902): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-01-30 13:40:13 (4048902): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-01-30 13:40:13 (4048902): VM state change detected. (old = 'poweredoff', new = 'running')
2025-01-30 13:40:13 (4048902): Detected: Web Application Enabled (http://localhost:58127)
2025-01-30 13:40:13 (4048902): Preference change detected
2025-01-30 13:40:13 (4048902): Setting CPU throttle for VM. (100%)
2025-01-30 13:40:13 (4048902): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 180 seconds) or (Vbox_job.xml: 900 seconds))
2025-01-30 13:40:15 (4048902): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-01-30 13:40:15 (4048902): Guest Log: BIOS: Booting from Hard Disk...
2025-01-30 13:40:44 (4048902): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-01-30 13:40:44 (4048902): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-01-30 13:40:44 (4048902): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-01-30 13:40:44 (4048902): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-01-30 13:40:44 (4048902): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-01-30 13:40:44 (4048902): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-01-30 13:40:44 (4048902): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-01-30 13:40:44 (4048902): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-01-30 13:40:44 (4048902): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-01-30 13:40:44 (4048902): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-01-30 13:40:44 (4048902): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-01-30 13:40:44 (4048902): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-01-30 13:40:44 (4048902): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-01-30 13:40:44 (4048902): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-01-30 13:40:44 (4048902): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-01-30 13:40:44 (4048902): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-01-30 13:40:44 (4048902): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-01-30 13:40:44 (4048902): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-01-30 13:40:44 (4048902): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-01-30 13:40:44 (4048902): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-01-30 13:40:44 (4048902): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-01-30 13:40:44 (4048902): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-01-30 13:40:44 (4048902): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-01-30 13:40:44 (4048902): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-01-30 13:40:44 (4048902): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-01-30 13:40:44 (4048902): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-01-30 13:40:44 (4048902): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-01-30 13:40:44 (4048902): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-01-30 13:40:44 (4048902): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-01-30 13:40:44 (4048902): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-01-30 13:40:44 (4048902): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-01-30 13:40:44 (4048902): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-01-30 13:40:54 (4048902): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-01-30 13:40:54 (4048902): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-01-30 13:41:15 (4048902): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-01-30 13:41:15 (4048902): Guest Log: 00:00:00.000407 main     Log opened 2025-01-30T18:41:13.331553000Z
2025-01-30 13:41:15 (4048902): Guest Log: 00:00:00.000775 main     OS Product: Linux
2025-01-30 13:41:15 (4048902): Guest Log: 00:00:00.000864 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-01-30 13:41:15 (4048902): Guest Log: 00:00:00.000938 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-01-30 13:41:15 (4048902): Guest Log: 00:00:00.001007 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-01-30 13:41:15 (4048902): Guest Log: 00:00:00.001009 main     Process ID: 1354
2025-01-30 13:41:15 (4048902): Guest Log: 00:00:00.001010 main     Package type: LINUX_64BITS_GENERIC
2025-01-30 13:41:15 (4048902): Guest Log: 00:00:00.004344 main     5.2.32 r132073 started. Verbose level = 0
2025-01-30 13:41:16 (4048902): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-01-30 13:41:16 (4048902): Guest Log: [INFO] Mounting shared directory
2025-01-30 13:41:16 (4048902): Guest Log: [INFO] Checking for init_data.xml
2025-01-30 13:41:22 (4048902): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-01-30 13:41:22 (4048902): Guest Log: [INFO] Detected branch: prod
2025-01-30 13:41:22 (4048902): Guest Log: This is the prod version of the ATLAS job wrapper
2025-01-30 13:41:22 (4048902): Guest Log: Copying input files
2025-01-30 13:41:27 (4048902): Guest Log: Copied input files into RunAtlas.
2025-01-30 13:41:27 (4048902): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-01-30 13:41:27 (4048902): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-01-30 13:41:27 (4048902): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-01-30 13:41:27 (4048902): Guest Log: Further information can be found at the LHC@home message board.
2025-01-30 13:41:36 (4048902): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-01-30 13:41:36 (4048902): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-01-30 13:41:36 (4048902): Guest Log: 2.6.3.0 1630 0 32184 142145 4 1 3117296 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-01-30 13:41:40 (4048902): Guest Log: copied the webapp to /var/www
2025-01-30 13:41:40 (4048902): Guest Log: ATHENA_PROC_NUMBER=8
2025-01-30 13:41:40 (4048902): Guest Log: ATHENA_CORE_NUMBER=8
2025-01-30 13:41:41 (4048902): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-01-30 13:41:41 (4048902): Guest Log:  *** Starting ATLAS job. (PandaID=6494204227 taskID=43078919) ***
2025-01-30 15:19:14 (4048902): Status Report: Elapsed Time: '6000.000000'
2025-01-30 15:19:14 (4048902): Status Report: CPU Time: '33620.840000'
2025-01-30 16:58:14 (4048902): Status Report: Elapsed Time: '12000.000000'
2025-01-30 16:58:14 (4048902): Status Report: CPU Time: '78570.460000'
2025-01-30 18:37:15 (4048902): Status Report: Elapsed Time: '18000.000000'
2025-01-30 18:37:15 (4048902): Status Report: CPU Time: '123509.700000'
2025-01-30 19:12:26 (4048902): Preference change detected
2025-01-30 19:12:26 (4048902): Setting CPU throttle for VM. (100%)
2025-01-30 19:12:26 (4048902): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 180 seconds) or (Vbox_job.xml: 900 seconds))
2025-01-30 20:16:16 (4048902): Status Report: Elapsed Time: '24000.000000'
2025-01-30 20:16:16 (4048902): Status Report: CPU Time: '168472.720000'
2025-01-30 21:30:51 (4048902): Guest Log:  *** Job finished ***
2025-01-30 21:30:51 (4048902): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-01-30 21:30:51 (4048902): Guest Log: 2025-01-31 02:30:39,519 | INFO     | [payload] failed_post thread has finished
2025-01-30 21:30:51 (4048902): Guest Log: 2025-01-31 02:30:39,637 | INFO     | [payload] control thread has finished
2025-01-30 21:30:51 (4048902): Guest Log: 2025-01-31 02:30:41,256 | INFO     | [data] queue_monitor thread has finished
2025-01-30 21:30:51 (4048902): Guest Log: 2025-01-31 02:30:42,259 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140138157143872)>', '<ExcThread(monitor, started 140137551861504)>']
2025-01-30 21:30:51 (4048902): Guest Log: 2025-01-31 02:30:42,551 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-01-30 21:30:51 (4048902): Guest Log: 2025-01-31 02:30:42,551 | INFO     | [monitor] control thread has ended
2025-01-30 21:30:51 (4048902): Guest Log: 2025-01-31 02:30:47,264 | INFO     | all workflow threads have been joined
2025-01-30 21:30:51 (4048902): Guest Log: 2025-01-31 02:30:47,265 | INFO     | end of generic workflow (traces error code: 0)
2025-01-30 21:30:51 (4048902): Guest Log: 2025-01-31 02:30:47,265 | INFO     | traces error code: 0
2025-01-30 21:30:51 (4048902): Guest Log: 2025-01-31 02:30:47,266 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-01-30 21:30:51 (4048902): Guest Log: 2025-01-31 02:30:47,478 [wrapper] ==== pilot stdout END ====
2025-01-30 21:30:51 (4048902): Guest Log: 2025-01-31 02:30:47,495 [wrapper] ==== wrapper stdout RESUME ====
2025-01-30 21:30:51 (4048902): Guest Log: 2025-01-31 02:30:47,512 [wrapper] pilotpid: 6012
2025-01-30 21:30:51 (4048902): Guest Log: 2025-01-31 02:30:47,529 [wrapper] Pilot exit status: 0
2025-01-30 21:30:51 (4048902): Guest Log: 2025-01-31 02:30:47,639 [wrapper] pandaids: 6494204227
2025-01-30 21:30:51 (4048902): Guest Log: 2025-01-31 02:30:47,753 [wrapper] cleanup supervisor_pilot  5917 6013
2025-01-30 21:30:51 (4048902): Guest Log: 2025-01-31 02:30:47,771 [wrapper] Test setup, not cleaning
2025-01-30 21:30:51 (4048902): Guest Log: 2025-01-31 02:30:47,808 [wrapper] apfmon messages muted
2025-01-30 21:30:51 (4048902): Guest Log: 2025-01-31 02:30:47,827 [wrapper] ==== wrapper stdout END ====
2025-01-30 21:30:51 (4048902): Guest Log: 2025-01-31 02:30:47,845 [wrapper] ==== wrapper stderr END ====
2025-01-30 21:30:51 (4048902): Guest Log:  *** Error codes and diagnostics ***
2025-01-30 21:30:51 (4048902): Guest Log:     "exeErrorCode": 0,
2025-01-30 21:30:51 (4048902): Guest Log:     "exeErrorDiag": "",
2025-01-30 21:30:51 (4048902): Guest Log:     "pilotErrorCode": 0,
2025-01-30 21:30:51 (4048902): Guest Log:     "pilotErrorDiag": "",
2025-01-30 21:30:51 (4048902): Guest Log:  *** Listing of results directory ***
2025-01-30 21:30:51 (4048902): Guest Log: total 326772
2025-01-30 21:30:51 (4048902): Guest Log: -rw-r--r--. 1 atlas atlas    491065 Jan 29 15:46 pilot3.tar.gz
2025-01-30 21:30:51 (4048902): Guest Log: -rw-r--r--. 1 atlas atlas      5117 Jan 29 16:25 queuedata.json
2025-01-30 21:30:51 (4048902): Guest Log: -rwx------. 1 atlas atlas     34924 Jan 29 16:26 runpilot2-wrapper.sh
2025-01-30 21:30:51 (4048902): Guest Log: -rw-r--r--. 1 atlas atlas     17569 Jan 30 18:41 start_atlas.sh
2025-01-30 21:30:51 (4048902): Guest Log: -rw-r--r--. 1 atlas atlas      5900 Jan 30 18:41 init_data.xml
2025-01-30 21:30:51 (4048902): Guest Log: -rw-r--r--. 1 atlas atlas    503498 Jan 30 18:41 input.tar.gz
2025-01-30 21:30:51 (4048902): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jan 30 18:41 EVNT.43078917._000370.pool.root.1 -> /data/./ATLAS.root_0
2025-01-30 21:30:51 (4048902): Guest Log: -rw-r--r--. 1 atlas atlas      2543 Jan 30 18:41 pandaJob.out
2025-01-30 21:30:51 (4048902): Guest Log: -rw-------. 1 atlas atlas       424 Jan 30 18:41 setup.sh.local
2025-01-30 21:30:51 (4048902): Guest Log: -rw-------. 1 atlas atlas    968988 Jan 30 18:42 agis_schedconf.cvmfs.json
2025-01-30 21:30:51 (4048902): Guest Log: drwx------. 4 atlas atlas      4096 Jan 30 18:43 pilot3
2025-01-30 21:30:51 (4048902): Guest Log: -rw-------. 1 atlas atlas 324645827 Jan 31 02:29 HITS.43078919._008785.pool.root.1
2025-01-30 21:30:51 (4048902): Guest Log: -rw-------. 1 atlas atlas      1042 Jan 31 02:30 memory_monitor_summary.json
2025-01-30 21:30:51 (4048902): Guest Log: -rw-------. 1 atlas atlas   1580185 Jan 31 02:30 agis_ddmendpoints.agis.ALL.json
2025-01-30 21:30:51 (4048902): Guest Log: -rw-------. 1 atlas atlas    522987 Jan 31 02:30 log.43078919._008785.job.log.tgz.1
2025-01-30 21:30:51 (4048902): Guest Log: -rw-------. 1 atlas atlas      7764 Jan 31 02:30 heartbeat.json
2025-01-30 21:30:51 (4048902): Guest Log: -rw-------. 1 atlas atlas        95 Jan 31 02:30 pilot_heartbeat.json
2025-01-30 21:30:51 (4048902): Guest Log: -rw-------. 1 atlas atlas      4275 Jan 31 02:30 pilotlog.txt
2025-01-30 21:30:51 (4048902): Guest Log: -rw-------. 1 atlas atlas   2605095 Jan 31 02:30 log.43078919._008785.job.log.1
2025-01-30 21:30:51 (4048902): Guest Log: -rw-------. 1 atlas atlas       357 Jan 31 02:30 output.list
2025-01-30 21:30:51 (4048902): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jan 31 02:30 runtime_log
2025-01-30 21:30:51 (4048902): Guest Log: -rw-------. 1 atlas atlas   3143680 Jan 31 02:30 result.tar.gz
2025-01-30 21:30:51 (4048902): Guest Log: -rw-------. 1 atlas atlas       665 Jan 31 02:30 W70MDmA5Px6n9Rq4apOajLDm4fhM0noT9bVoFjIUDmREIKDmZfTv1m.diag
2025-01-30 21:30:51 (4048902): Guest Log: -rw-r--r--. 1 atlas atlas     10951 Jan 31 02:30 runtime_log.err
2025-01-30 21:30:51 (4048902): Guest Log: Looking for outputfile HITS.43078919._008785.pool.root.1
2025-01-30 21:30:51 (4048902): Guest Log: HITS file was successfully produced
2025-01-30 21:30:51 (4048902): Guest Log: -rw-------. 1 atlas atlas 324645827 Jan 31 02:29 /home/atlas/RunAtlas/HITS.43078919._008785.pool.root.1
2025-01-30 21:30:52 (4048902): Guest Log: Successfully finished the ATLAS job!
2025-01-30 21:30:52 (4048902): Guest Log: Copying the results back to the shared directory!
2025-01-30 21:30:52 (4048902): Guest Log:  *** Contents of shared directory: ***
2025-01-30 21:30:52 (4048902): Guest Log: total 334840
2025-01-30 21:30:52 (4048902): Guest Log: -rw-r--r--. 1 root root 339189857 Jan 30 18:40 ATLAS.root_0
2025-01-30 21:30:52 (4048902): Guest Log: -rw-r--r--. 1 root root      5900 Jan 30 18:40 init_data.xml
2025-01-30 21:30:52 (4048902): Guest Log: -rw-r--r--. 1 root root    503498 Jan 30 18:40 input.tar.gz
2025-01-30 21:30:52 (4048902): Guest Log: -rw-r--r--. 1 root root   3143680 Jan 31 02:30 result.tar.gz
2025-01-30 21:30:52 (4048902): Guest Log: -rw-r--r--. 1 root root     17569 Jan 30 18:40 start_atlas.sh
2025-01-30 21:30:52 (4048902): Guest Log:  *** Success! Shutting down the machine. ***
2025-01-30 21:30:52 (4048902): VM Completion File Detected.
2025-01-30 21:30:52 (4048902): Powering off VM.
2025-01-30 21:30:53 (4048902): Successfully stopped VM.
2025-01-30 21:30:53 (4048902): Deregistering VM. (boinc_d446e400755b3e11, slot#0)
2025-01-30 21:30:53 (4048902): Removing network bandwidth throttle group from VM.
2025-01-30 21:30:53 (4048902): Removing VM from VirtualBox.
21:30:58 (4048902): called boinc_finish(0)

</stderr_txt>
]]>

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