Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
setpriority: Permission denied
2025-01-30 00:15:21 (63376): Detected: vboxwrapper 26206
2025-01-30 00:15:21 (63376): Detected: BOINC client v8.0.2
2025-01-30 00:15:22 (63376): Detected: VirtualBox VboxManage Interface (Version: 7.0.22)
2025-01-30 00:15:22 (63376): Detected: Sandbox Configuration Enabled
2025-01-30 00:15:22 (63376): Successfully copied 'init_data.xml' to the shared directory.
2025-01-30 00:15:22 (63376): Create VM. (boinc_9aede007d19e3677, slot#0)
2025-01-30 00:15:22 (63376): Setting Memory Size for VM. (4800MB)
2025-01-30 00:15:22 (63376): Setting CPU Count for VM. (8)
2025-01-30 00:15:23 (63376): Setting Chipset Options for VM.
2025-01-30 00:15:23 (63376): Setting Graphics Controller Options for VM.
2025-01-30 00:15:23 (63376): Setting Boot Options for VM.
2025-01-30 00:15:23 (63376): Setting Network Configuration for NAT.
2025-01-30 00:15:23 (63376): Enabling VM Network Access.
2025-01-30 00:15:23 (63376): Disabling USB Support for VM.
2025-01-30 00:15:23 (63376): Disabling COM Port Support for VM.
2025-01-30 00:15:23 (63376): Disabling Audio Support for VM.
2025-01-30 00:15:23 (63376): Disabling Clipboard Support for VM.
2025-01-30 00:15:24 (63376): Disabling Drag and Drop Support for VM.
2025-01-30 00:15:24 (63376): Adding storage controller(s) to VM.
2025-01-30 00:15:24 (63376): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-01-30 00:15:26 (63376): Adding VirtualBox Guest Additions to VM.
2025-01-30 00:15:26 (63376): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-01-30 00:15:26 (63376): forwarding host port 50001 to guest port 80
2025-01-30 00:15:26 (63376): Enabling remote desktop for VM.
2025-01-30 00:15:26 (63376): Enabling shared directory for VM.
2025-01-30 00:15:26 (63376): Starting VM using VBoxManage interface. (boinc_9aede007d19e3677, slot#0)
2025-01-30 00:15:31 (63376): Successfully started VM. (PID = '63452')
2025-01-30 00:15:31 (63376): Reporting VM Process ID to BOINC.
2025-01-30 00:15:31 (63376): Guest Log: BIOS: VirtualBox 7.0.22
2025-01-30 00:15:31 (63376): Guest Log: CPUID EDX: 0x178bfbff
2025-01-30 00:15:31 (63376): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-01-30 00:15:31 (63376): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-01-30 00:15:31 (63376): VM state change detected. (old = 'poweredoff', new = 'running')
2025-01-30 00:15:31 (63376): Detected: Web Application Enabled (http://localhost:50001)
2025-01-30 00:15:31 (63376): Detected: Remote Desktop Enabled (localhost:50002)
2025-01-30 00:15:32 (63376): VM state change detected. (old = 'running', new = 'paused')
2025-01-30 00:15:45 (63376): Preference change detected
2025-01-30 00:15:45 (63376): Setting CPU throttle for VM. (100%)
2025-01-30 00:15:45 (63376): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-01-30 00:15:46 (63376): VM state change detected. (old = 'paused', new = 'running')
2025-01-30 00:15:47 (63376): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-01-30 00:15:47 (63376): Guest Log: BIOS: Booting from Hard Disk...
2025-01-30 00:15:50 (63376): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-01-30 00:15:50 (63376): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-01-30 00:15:50 (63376): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-01-30 00:15:50 (63376): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-01-30 00:15:50 (63376): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-01-30 00:15:50 (63376): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-01-30 00:15:50 (63376): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-01-30 00:15:50 (63376): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-01-30 00:15:50 (63376): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-01-30 00:15:50 (63376): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-01-30 00:15:50 (63376): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-01-30 00:15:50 (63376): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-01-30 00:15:50 (63376): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-01-30 00:15:50 (63376): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-01-30 00:15:50 (63376): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-01-30 00:15:50 (63376): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-01-30 00:15:50 (63376): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-01-30 00:15:50 (63376): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-01-30 00:15:50 (63376): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-01-30 00:15:50 (63376): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-01-30 00:15:50 (63376): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-01-30 00:15:50 (63376): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-01-30 00:15:50 (63376): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-01-30 00:15:50 (63376): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-01-30 00:15:50 (63376): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-01-30 00:15:50 (63376): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-01-30 00:15:50 (63376): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-01-30 00:15:50 (63376): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-01-30 00:15:50 (63376): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-01-30 00:15:50 (63376): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-01-30 00:15:50 (63376): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-01-30 00:15:50 (63376): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-01-30 00:15:57 (63376): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-01-30 00:15:57 (63376): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-01-30 00:16:07 (63376): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-01-30 00:16:07 (63376): Guest Log: 00:00:00.000161 main     Log opened 2025-01-30T05:15:51.334200000Z
2025-01-30 00:16:07 (63376): Guest Log: 00:00:00.000607 main     OS Product: Linux
2025-01-30 00:16:07 (63376): Guest Log: 00:00:00.000705 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-01-30 00:16:07 (63376): Guest Log: 00:00:00.000788 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-01-30 00:16:07 (63376): Guest Log: 00:00:00.000866 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-01-30 00:16:07 (63376): Guest Log: 00:00:00.000867 main     Process ID: 1370
2025-01-30 00:16:07 (63376): Guest Log: 00:00:00.000868 main     Package type: LINUX_64BITS_GENERIC
2025-01-30 00:16:07 (63376): Guest Log: 00:00:00.003194 main     5.2.32 r132073 started. Verbose level = 0
2025-01-30 00:16:07 (63376): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-01-30 00:16:07 (63376): Guest Log: [INFO] Mounting shared directory
2025-01-30 00:16:07 (63376): Guest Log: [INFO] Checking for init_data.xml
2025-01-30 00:16:11 (63376): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-01-30 00:16:11 (63376): Guest Log: [INFO] Detected branch: prod
2025-01-30 00:16:11 (63376): Guest Log: This is the prod version of the ATLAS job wrapper
2025-01-30 00:16:11 (63376): Guest Log: Copying input files
2025-01-30 00:16:15 (63376): Guest Log: Copied input files into RunAtlas.
2025-01-30 00:16:15 (63376): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-01-30 00:16:15 (63376): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-01-30 00:16:15 (63376): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-01-30 00:16:15 (63376): Guest Log: Further information can be found at the LHC@home message board.
2025-01-30 00:16:23 (63376): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-01-30 00:16:24 (63376): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-01-30 00:16:24 (63376): Guest Log: 2.6.3.0 1645 0 32160 142122 4 1 3117296 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-01-30 00:16:25 (63376): Guest Log: copied the webapp to /var/www
2025-01-30 00:16:25 (63376): Guest Log: ATHENA_PROC_NUMBER=8
2025-01-30 00:16:25 (63376): Guest Log: ATHENA_CORE_NUMBER=8
2025-01-30 00:16:25 (63376): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-01-30 00:16:25 (63376): Guest Log:  *** Starting ATLAS job. (PandaID=6494130590 taskID=43078919) ***
2025-01-30 01:55:45 (63376): Status Report: Elapsed Time: '6000.000000'
2025-01-30 01:55:45 (63376): Status Report: CPU Time: '36944.140000'
2025-01-30 03:35:46 (63376): Status Report: Elapsed Time: '12000.000000'
2025-01-30 03:35:46 (63376): Status Report: CPU Time: '81912.830000'
2025-01-30 05:15:46 (63376): Status Report: Elapsed Time: '18000.000000'
2025-01-30 05:15:46 (63376): Status Report: CPU Time: '120900.340000'
2025-01-30 06:55:46 (63376): Status Report: Elapsed Time: '24000.000000'
2025-01-30 06:55:46 (63376): Status Report: CPU Time: '157406.230000'
2025-01-30 06:56:43 (63376): Guest Log:  *** Job finished ***
2025-01-30 06:56:43 (63376): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-01-30 06:56:43 (63376): Guest Log: 2025-01-30 11:56:05,565 | INFO     | [job] control thread has finished
2025-01-30 06:56:43 (63376): Guest Log: 2025-01-30 11:56:05,687 | INFO     | [payload] execute_payloads thread has finished
2025-01-30 06:56:43 (63376): Guest Log: 2025-01-30 11:56:08,674 | INFO     | [data] queue_monitor thread has finished
2025-01-30 06:56:43 (63376): Guest Log: 2025-01-30 11:56:09,331 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140272610715456)>', '<ExcThread(monitor, started 140271736051456)>']
2025-01-30 06:56:43 (63376): Guest Log: 2025-01-30 11:56:09,651 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-01-30 06:56:43 (63376): Guest Log: 2025-01-30 11:56:09,651 | INFO     | [monitor] control thread has ended
2025-01-30 06:56:43 (63376): Guest Log: 2025-01-30 11:56:14,340 | INFO     | all workflow threads have been joined
2025-01-30 06:56:43 (63376): Guest Log: 2025-01-30 11:56:14,340 | INFO     | end of generic workflow (traces error code: 0)
2025-01-30 06:56:43 (63376): Guest Log: 2025-01-30 11:56:14,340 | INFO     | traces error code: 0
2025-01-30 06:56:43 (63376): Guest Log: 2025-01-30 11:56:14,340 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-01-30 06:56:43 (63376): Guest Log: 2025-01-30 11:56:14,475 [wrapper] ==== pilot stdout END ====
2025-01-30 06:56:43 (63376): Guest Log: 2025-01-30 11:56:14,497 [wrapper] ==== wrapper stdout RESUME ====
2025-01-30 06:56:43 (63376): Guest Log: 2025-01-30 11:56:14,516 [wrapper] pilotpid: 6026
2025-01-30 06:56:43 (63376): Guest Log: 2025-01-30 11:56:14,536 [wrapper] Pilot exit status: 0
2025-01-30 06:56:43 (63376): Guest Log: 2025-01-30 11:56:14,645 [wrapper] pandaids: 6494130590
2025-01-30 06:56:43 (63376): Guest Log: 2025-01-30 11:56:14,739 [wrapper] cleanup supervisor_pilot 23372 6027
2025-01-30 06:56:43 (63376): Guest Log: 2025-01-30 11:56:14,760 [wrapper] Test setup, not cleaning
2025-01-30 06:56:43 (63376): Guest Log: 2025-01-30 11:56:14,805 [wrapper] apfmon messages muted
2025-01-30 06:56:43 (63376): Guest Log: 2025-01-30 11:56:14,828 [wrapper] ==== wrapper stdout END ====
2025-01-30 06:56:43 (63376): Guest Log: 2025-01-30 11:56:14,850 [wrapper] ==== wrapper stderr END ====
2025-01-30 06:56:43 (63376): Guest Log:  *** Error codes and diagnostics ***
2025-01-30 06:56:43 (63376): Guest Log:     "exeErrorCode": 0,
2025-01-30 06:56:43 (63376): Guest Log:     "exeErrorDiag": "",
2025-01-30 06:56:43 (63376): Guest Log:     "pilotErrorCode": 0,
2025-01-30 06:56:43 (63376): Guest Log:     "pilotErrorDiag": "",
2025-01-30 06:56:43 (63376): Guest Log:  *** Listing of results directory ***
2025-01-30 06:56:43 (63376): Guest Log: total 328816
2025-01-30 06:56:43 (63376): Guest Log: -rw-r--r--. 1 atlas atlas    491065 Jan 29 07:56 pilot3.tar.gz
2025-01-30 06:56:43 (63376): Guest Log: -rwx------. 1 atlas atlas     34924 Jan 29 08:03 runpilot2-wrapper.sh
2025-01-30 06:56:43 (63376): Guest Log: -rw-r--r--. 1 atlas atlas      5117 Jan 29 08:03 queuedata.json
2025-01-30 06:56:43 (63376): Guest Log: -rw-r-----. 1 atlas atlas     17569 Jan 30 05:15 start_atlas.sh
2025-01-30 06:56:43 (63376): Guest Log: -rw-r-----. 1 atlas atlas    503490 Jan 30 05:15 input.tar.gz
2025-01-30 06:56:43 (63376): Guest Log: -rw-r--r--. 1 atlas atlas      6064 Jan 30 05:15 init_data.xml
2025-01-30 06:56:43 (63376): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jan 30 05:15 EVNT.43078917._000035.pool.root.1 -> /data/./ATLAS.root_0
2025-01-30 06:56:43 (63376): Guest Log: -rw-r--r--. 1 atlas atlas      2541 Jan 30 05:16 pandaJob.out
2025-01-30 06:56:43 (63376): Guest Log: -rw-------. 1 atlas atlas       424 Jan 30 05:16 setup.sh.local
2025-01-30 06:56:43 (63376): Guest Log: -rw-------. 1 atlas atlas    969080 Jan 30 05:16 agis_schedconf.cvmfs.json
2025-01-30 06:56:43 (63376): Guest Log: drwx------. 4 atlas atlas      4096 Jan 30 05:16 pilot3
2025-01-30 06:56:43 (63376): Guest Log: -rw-------. 1 atlas atlas 329221034 Jan 30 11:54 HITS.43078919._004001.pool.root.1
2025-01-30 06:56:43 (63376): Guest Log: -rw-------. 1 atlas atlas      1035 Jan 30 11:55 memory_monitor_summary.json
2025-01-30 06:56:43 (63376): Guest Log: -rw-------. 1 atlas atlas   1580185 Jan 30 11:55 agis_ddmendpoints.agis.ALL.json
2025-01-30 06:56:43 (63376): Guest Log: -rw-------. 1 atlas atlas    422921 Jan 30 11:55 log.43078919._004001.job.log.tgz.1
2025-01-30 06:56:43 (63376): Guest Log: -rw-------. 1 atlas atlas        95 Jan 30 11:55 pilot_heartbeat.json
2025-01-30 06:56:43 (63376): Guest Log: -rw-------. 1 atlas atlas      7749 Jan 30 11:56 heartbeat.json
2025-01-30 06:56:43 (63376): Guest Log: -rw-------. 1 atlas atlas      4777 Jan 30 11:56 pilotlog.txt
2025-01-30 06:56:43 (63376): Guest Log: -rw-------. 1 atlas atlas   1465169 Jan 30 11:56 log.43078919._004001.job.log.1
2025-01-30 06:56:43 (63376): Guest Log: -rw-------. 1 atlas atlas       357 Jan 30 11:56 output.list
2025-01-30 06:56:43 (63376): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jan 30 11:56 runtime_log
2025-01-30 06:56:43 (63376): Guest Log: -rw-------. 1 atlas atlas   1904640 Jan 30 11:56 result.tar.gz
2025-01-30 06:56:43 (63376): Guest Log: -rw-r--r--. 1 atlas atlas     10957 Jan 30 11:56 runtime_log.err
2025-01-30 06:56:43 (63376): Guest Log: -rw-------. 1 atlas atlas       666 Jan 30 11:56 InYMDmIEIx6n9Rq4apOajLDm4fhM0noT9bVoFjIUDm8iHKDmvzBTcm.diag
2025-01-30 06:56:43 (63376): Guest Log: Looking for outputfile HITS.43078919._004001.pool.root.1
2025-01-30 06:56:43 (63376): Guest Log: HITS file was successfully produced
2025-01-30 06:56:43 (63376): Guest Log: -rw-------. 1 atlas atlas 329221034 Jan 30 11:54 /home/atlas/RunAtlas/HITS.43078919._004001.pool.root.1
2025-01-30 06:56:43 (63376): Guest Log: Successfully finished the ATLAS job!
2025-01-30 06:56:43 (63376): Guest Log: Copying the results back to the shared directory!
2025-01-30 06:56:43 (63376): Guest Log:  *** Contents of shared directory: ***
2025-01-30 06:56:43 (63376): Guest Log: total 336544
2025-01-30 06:56:43 (63376): Guest Log: -rw-rw----. 1 root root 342180743 Jan 30 05:15 ATLAS.root_0
2025-01-30 06:56:43 (63376): Guest Log: -rw-rw-r--. 1 root root      6064 Jan 30 05:15 init_data.xml
2025-01-30 06:56:43 (63376): Guest Log: -rw-rw----. 1 root root    503490 Jan 30 05:15 input.tar.gz
2025-01-30 06:56:43 (63376): Guest Log: -rw-r--r--. 1 root root   1904640 Jan 30  2025 result.tar.gz
2025-01-30 06:56:43 (63376): Guest Log: -rw-rw----. 1 root root     17569 Jan 30 05:15 start_atlas.sh
2025-01-30 06:56:43 (63376): Guest Log:  *** Success! Shutting down the machine. ***
2025-01-30 06:56:43 (63376): VM Completion File Detected.
2025-01-30 06:56:43 (63376): Powering off VM.
2025-01-30 06:56:44 (63376): Successfully stopped VM.
2025-01-30 06:56:44 (63376): Deregistering VM. (boinc_9aede007d19e3677, slot#0)
2025-01-30 06:56:44 (63376): Removing network bandwidth throttle group from VM.
2025-01-30 06:56:44 (63376): Removing VM from VirtualBox.
06:56:49 (63376): called boinc_finish(0)

</stderr_txt>
]]>

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