Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-02-01 01:15:05 (27788): Detected: vboxwrapper 26206
2025-02-01 01:15:05 (27788): Detected: BOINC client v8.0.2
2025-02-01 01:15:06 (27788): Detected: VirtualBox VboxManage Interface (Version: 6.1.12)
2025-02-01 01:15:06 (27788): Successfully copied 'init_data.xml' to the shared directory.
2025-02-01 01:15:07 (27788): Create VM. (boinc_404134dce18d3284, slot#6)
2025-02-01 01:15:07 (27788): Setting Memory Size for VM. (4200MB)
2025-02-01 01:15:07 (27788): Setting CPU Count for VM. (2)
2025-02-01 01:15:08 (27788): Setting Chipset Options for VM.
2025-02-01 01:15:08 (27788): Setting Graphics Controller Options for VM.
2025-02-01 01:15:08 (27788): Setting Boot Options for VM.
2025-02-01 01:15:08 (27788): Setting Network Configuration for NAT.
2025-02-01 01:15:09 (27788): Enabling VM Network Access.
2025-02-01 01:15:09 (27788): Disabling USB Support for VM.
2025-02-01 01:15:09 (27788): Disabling COM Port Support for VM.
2025-02-01 01:15:09 (27788): Disabling LPT Port Support for VM.
2025-02-01 01:15:10 (27788): Disabling Audio Support for VM.
2025-02-01 01:15:10 (27788): Disabling Clipboard Support for VM.
2025-02-01 01:15:10 (27788): Disabling Drag and Drop Support for VM.
2025-02-01 01:15:10 (27788): Adding storage controller(s) to VM.
2025-02-01 01:15:11 (27788): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-02-01 01:15:11 (27788): Adding VirtualBox Guest Additions to VM.
2025-02-01 01:15:11 (27788): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-02-01 01:15:12 (27788): forwarding host port 52758 to guest port 80
2025-02-01 01:15:12 (27788): Enabling remote desktop for VM.
2025-02-01 01:15:12 (27788): Required extension pack not installed, remote desktop not enabled.
2025-02-01 01:15:12 (27788): Enabling shared directory for VM.
2025-02-01 01:15:13 (27788): Starting VM using VBoxManage interface. (boinc_404134dce18d3284, slot#6)
2025-02-01 01:15:16 (27788): Successfully started VM. (PID = '26824')
2025-02-01 01:15:16 (27788): Reporting VM Process ID to BOINC.
2025-02-01 01:15:16 (27788): Guest Log: BIOS: VirtualBox 6.1.12
2025-02-01 01:15:16 (27788): Guest Log: CPUID EDX: 0x178bfbff
2025-02-01 01:15:16 (27788): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-02-01 01:15:16 (27788): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-02-01 01:15:16 (27788): VM state change detected. (old = 'poweredoff', new = 'running')
2025-02-01 01:15:16 (27788): Detected: Web Application Enabled (http://localhost:52758)
2025-02-01 01:15:16 (27788): Preference change detected
2025-02-01 01:15:16 (27788): Setting CPU throttle for VM. (60%)
2025-02-01 01:15:16 (27788): Setting checkpoint interval to 18000 seconds. (Higher value of (Preference: 18000 seconds) or (Vbox_job.xml: 900 seconds))
2025-02-01 01:15:18 (27788): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-02-01 01:15:18 (27788): Guest Log: BIOS: Booting from Hard Disk...
2025-02-01 01:15:21 (27788): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-02-01 01:15:21 (27788): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-02-01 01:15:21 (27788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-02-01 01:15:21 (27788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-02-01 01:15:21 (27788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-02-01 01:15:21 (27788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-02-01 01:15:21 (27788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-02-01 01:15:21 (27788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-02-01 01:15:21 (27788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-02-01 01:15:21 (27788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-02-01 01:15:21 (27788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-02-01 01:15:21 (27788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-02-01 01:15:21 (27788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-02-01 01:15:21 (27788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-02-01 01:15:21 (27788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-02-01 01:15:21 (27788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-02-01 01:15:21 (27788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-02-01 01:15:21 (27788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-02-01 01:15:21 (27788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-02-01 01:15:21 (27788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-02-01 01:15:21 (27788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-02-01 01:15:21 (27788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-02-01 01:15:21 (27788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-02-01 01:15:21 (27788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-02-01 01:15:21 (27788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-02-01 01:15:21 (27788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-02-01 01:15:21 (27788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-02-01 01:15:21 (27788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-02-01 01:15:21 (27788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-02-01 01:15:21 (27788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-02-01 01:15:21 (27788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-02-01 01:15:21 (27788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-02-01 01:15:28 (27788): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-02-01 01:15:28 (27788): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-02-01 01:15:36 (27788): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-02-01 01:15:36 (27788): Guest Log: 00:00:00.000142 main     Log opened 2025-02-01T01:15:35.187739000Z
2025-02-01 01:15:36 (27788): Guest Log: 00:00:00.000224 main     OS Product: Linux
2025-02-01 01:15:36 (27788): Guest Log: 00:00:00.000252 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-02-01 01:15:36 (27788): Guest Log: 00:00:00.000272 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-02-01 01:15:36 (27788): Guest Log: 00:00:00.000292 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-02-01 01:15:36 (27788): Guest Log: 00:00:00.000293 main     Process ID: 1258
2025-02-01 01:15:36 (27788): Guest Log: 00:00:00.000293 main     Package type: LINUX_64BITS_GENERIC
2025-02-01 01:15:36 (27788): Guest Log: 00:00:00.001607 main     5.2.32 r132073 started. Verbose level = 0
2025-02-01 01:15:36 (27788): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-02-01 01:15:36 (27788): Guest Log: [INFO] Mounting shared directory
2025-02-01 01:15:37 (27788): Guest Log: [INFO] Checking for init_data.xml
2025-02-01 01:15:46 (27788): Guest Log: 00:00:10.005118 timesync vgsvcTimeSyncWorker: Radical guest time change: -46 788 795 703 000ns (GuestNow=1 738 325 746 395 987 000 ns GuestLast=1 738 372 535 191 690 000 ns fSetTimeLastLoop=true )
2025-02-01 01:15:50 (27788): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-02-01 01:15:50 (27788): Guest Log: [INFO] Detected branch: prod
2025-02-01 01:15:50 (27788): Guest Log: This is the prod version of the ATLAS job wrapper
2025-02-01 01:15:50 (27788): Guest Log: Copying input files
2025-02-01 01:15:53 (27788): Guest Log: Copied input files into RunAtlas.
2025-02-01 01:15:53 (27788): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-02-01 01:15:53 (27788): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-02-01 01:15:53 (27788): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-02-01 01:15:53 (27788): Guest Log: Further information can be found at the LHC@home message board.
2025-02-01 01:16:03 (27788): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-02-01 01:16:03 (27788): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-02-01 01:16:03 (27788): Guest Log: 2.6.3.0 1535 0 30132 142171 4 1 3117296 4096000 0 65024 0 0 n/a 0 0 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-02-01 01:16:05 (27788): Guest Log: copied the webapp to /var/www
2025-02-01 01:16:05 (27788): Guest Log: ATHENA_PROC_NUMBER=2
2025-02-01 01:16:05 (27788): Guest Log: ATHENA_CORE_NUMBER=2
2025-02-01 01:16:05 (27788): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-02-01 01:16:05 (27788): Guest Log:  *** Starting ATLAS job. (PandaID=6493691772 taskID=43078907) ***
2025-02-01 02:55:20 (27788): Status Report: Elapsed Time: '6000.000000'
2025-02-01 02:55:20 (27788): Status Report: CPU Time: '5922.812500'
2025-02-01 04:35:25 (27788): Status Report: Elapsed Time: '12000.000000'
2025-02-01 04:35:25 (27788): Status Report: CPU Time: '13163.828125'
2025-02-01 06:15:29 (27788): Status Report: Elapsed Time: '18000.000000'
2025-02-01 06:15:29 (27788): Status Report: CPU Time: '20403.328125'
2025-02-01 07:55:33 (27788): Status Report: Elapsed Time: '24000.000000'
2025-02-01 07:55:33 (27788): Status Report: CPU Time: '27639.625000'
2025-02-01 09:35:37 (27788): Status Report: Elapsed Time: '30000.000000'
2025-02-01 09:35:37 (27788): Status Report: CPU Time: '34877.953125'
2025-02-01 11:15:40 (27788): Status Report: Elapsed Time: '36000.000000'
2025-02-01 11:15:40 (27788): Status Report: CPU Time: '42119.781250'
2025-02-01 12:55:44 (27788): Status Report: Elapsed Time: '42000.000000'
2025-02-01 12:55:44 (27788): Status Report: CPU Time: '49361.734375'
2025-02-01 12:59:15 (27788): Guest Log:  *** Job finished ***
2025-02-01 12:59:15 (27788): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-02-01 12:59:15 (27788): Guest Log: 2025-01-31 23:59:06,960 | INFO     | [payload] failed_post thread has finished
2025-02-01 12:59:15 (27788): Guest Log: 2025-01-31 23:59:07,203 | INFO     | [data] copytool_out thread has finished
2025-02-01 12:59:15 (27788): Guest Log: 2025-01-31 23:59:09,107 | INFO     | [data] queue_monitor thread has finished
2025-02-01 12:59:15 (27788): Guest Log: 2025-01-31 23:59:09,885 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140711671465792)>', '<ExcThread(monitor, started 140711089391360)>']
2025-02-01 12:59:15 (27788): Guest Log: 2025-01-31 23:59:10,428 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-02-01 12:59:15 (27788): Guest Log: 2025-01-31 23:59:10,429 | INFO     | [monitor] control thread has ended
2025-02-01 12:59:15 (27788): Guest Log: 2025-01-31 23:59:14,886 | INFO     | all workflow threads have been joined
2025-02-01 12:59:15 (27788): Guest Log: 2025-01-31 23:59:14,887 | INFO     | end of generic workflow (traces error code: 0)
2025-02-01 12:59:15 (27788): Guest Log: 2025-01-31 23:59:14,887 | INFO     | traces error code: 0
2025-02-01 12:59:15 (27788): Guest Log: 2025-01-31 23:59:14,887 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-02-01 12:59:15 (27788): Guest Log: 2025-01-31 23:59:14,954 [wrapper] ==== pilot stdout END ====
2025-02-01 12:59:15 (27788): Guest Log: 2025-01-31 23:59:14,958 [wrapper] ==== wrapper stdout RESUME ====
2025-02-01 12:59:15 (27788): Guest Log: 2025-01-31 23:59:14,962 [wrapper] pilotpid: 5858
2025-02-01 12:59:15 (27788): Guest Log: 2025-01-31 23:59:14,976 [wrapper] Pilot exit status: 0
2025-02-01 12:59:15 (27788): Guest Log: 2025-01-31 23:59:15,056 [wrapper] pandaids: 6493691772
2025-02-01 12:59:15 (27788): Guest Log: 2025-01-31 23:59:15,090 [wrapper] cleanup supervisor_pilot 20312 5859
2025-02-01 12:59:15 (27788): Guest Log: 2025-01-31 23:59:15,094 [wrapper] Test setup, not cleaning
2025-02-01 12:59:15 (27788): Guest Log: 2025-01-31 23:59:15,111 [wrapper] apfmon messages muted
2025-02-01 12:59:15 (27788): Guest Log: 2025-01-31 23:59:15,116 [wrapper] ==== wrapper stdout END ====
2025-02-01 12:59:15 (27788): Guest Log: 2025-01-31 23:59:15,121 [wrapper] ==== wrapper stderr END ====
2025-02-01 12:59:15 (27788): Guest Log:  *** Error codes and diagnostics ***
2025-02-01 12:59:15 (27788): Guest Log:     "exeErrorCode": 0,
2025-02-01 12:59:15 (27788): Guest Log:     "exeErrorDiag": "",
2025-02-01 12:59:15 (27788): Guest Log:     "pilotErrorCode": 0,
2025-02-01 12:59:15 (27788): Guest Log:     "pilotErrorDiag": "",
2025-02-01 12:59:15 (27788): Guest Log:  *** Listing of results directory ***
2025-02-01 12:59:15 (27788): Guest Log: total 314088
2025-02-01 12:59:15 (27788): Guest Log: -rw-r--r--. 1 atlas atlas    491065 Jan 28 22:40 pilot3.tar.gz
2025-02-01 12:59:15 (27788): Guest Log: -rwx------. 1 atlas atlas     34924 Jan 28 22:46 runpilot2-wrapper.sh
2025-02-01 12:59:15 (27788): Guest Log: -rw-r--r--. 1 atlas atlas      5117 Jan 28 22:46 queuedata.json
2025-02-01 12:59:15 (27788): Guest Log: -rwxr-xr-x. 1 atlas atlas      9474 Jan 31 12:15 init_data.xml
2025-02-01 12:59:15 (27788): Guest Log: -rwxr-xr-x. 1 atlas atlas    503480 Jan 31 12:15 input.tar.gz
2025-02-01 12:59:15 (27788): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Jan 31 12:15 start_atlas.sh
2025-02-01 12:59:15 (27788): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jan 31 12:15 EVNT.43078905._000384.pool.root.1 -> /data/./ATLAS.root_0
2025-02-01 12:59:15 (27788): Guest Log: -rw-r--r--. 1 atlas atlas      2520 Jan 31 12:16 pandaJob.out
2025-02-01 12:59:15 (27788): Guest Log: -rw-------. 1 atlas atlas       424 Jan 31 12:16 setup.sh.local
2025-02-01 12:59:15 (27788): Guest Log: -rw-------. 1 atlas atlas    968472 Jan 31 12:17 agis_schedconf.cvmfs.json
2025-02-01 12:59:15 (27788): Guest Log: drwx------. 4 atlas atlas      4096 Jan 31 12:17 pilot3
2025-02-01 12:59:15 (27788): Guest Log: -rw-------. 1 atlas atlas 307114680 Jan 31 23:57 HITS.43078907._009744.pool.root.1
2025-02-01 12:59:15 (27788): Guest Log: -rw-------. 1 atlas atlas        95 Jan 31 23:58 pilot_heartbeat.json
2025-02-01 12:59:15 (27788): Guest Log: -rw-------. 1 atlas atlas      1027 Jan 31 23:58 memory_monitor_summary.json
2025-02-01 12:59:15 (27788): Guest Log: -rw-------. 1 atlas atlas   1580185 Jan 31 23:58 agis_ddmendpoints.agis.ALL.json
2025-02-01 12:59:15 (27788): Guest Log: -rw-------. 1 atlas atlas    586813 Jan 31 23:58 log.43078907._009744.job.log.tgz.1
2025-02-01 12:59:15 (27788): Guest Log: -rw-------. 1 atlas atlas      7737 Jan 31 23:59 heartbeat.json
2025-02-01 12:59:15 (27788): Guest Log: -rw-------. 1 atlas atlas      4398 Jan 31 23:59 pilotlog.txt
2025-02-01 12:59:15 (27788): Guest Log: -rw-------. 1 atlas atlas   4808002 Jan 31 23:59 log.43078907._009744.job.log.1
2025-02-01 12:59:15 (27788): Guest Log: -rw-------. 1 atlas atlas       357 Jan 31 23:59 output.list
2025-02-01 12:59:15 (27788): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jan 31 23:59 runtime_log
2025-02-01 12:59:15 (27788): Guest Log: -rw-------. 1 atlas atlas   5416960 Jan 31 23:59 result.tar.gz
2025-02-01 12:59:15 (27788): Guest Log: -rw-------. 1 atlas atlas       657 Jan 31 23:59 WqLODmcW9w6n9Rq4apOajLDm4fhM0noT9bVoFjIUDmcBHKDm8iBTzm.diag
2025-02-01 12:59:15 (27788): Guest Log: -rw-r--r--. 1 atlas atlas     10936 Jan 31 23:59 runtime_log.err
2025-02-01 12:59:15 (27788): Guest Log: Looking for outputfile HITS.43078907._009744.pool.root.1
2025-02-01 12:59:15 (27788): Guest Log: HITS file was successfully produced
2025-02-01 12:59:15 (27788): Guest Log: -rw-------. 1 atlas atlas 307114680 Jan 31 23:57 /home/atlas/RunAtlas/HITS.43078907._009744.pool.root.1
2025-02-01 12:59:17 (27788): Guest Log: Successfully finished the ATLAS job!
2025-02-01 12:59:17 (27788): Guest Log: Copying the results back to the shared directory!
2025-02-01 12:59:17 (27788): Guest Log:  *** Contents of shared directory: ***
2025-02-01 12:59:17 (27788): Guest Log: total 632292
2025-02-01 12:59:17 (27788): Guest Log: -rwxrwxrwx. 1 root root 334392513 Jan 31 12:15 ATLAS.root_0
2025-02-01 12:59:17 (27788): Guest Log: -rwxrwxrwx. 1 root root 307114680 Jan 31 23:59 HITS.pool.root.1
2025-02-01 12:59:17 (27788): Guest Log: -rwxrwxrwx. 1 root root      9474 Jan 31 12:15 init_data.xml
2025-02-01 12:59:17 (27788): Guest Log: -rwxrwxrwx. 1 root root    503480 Jan 29 01:54 input.tar.gz
2025-02-01 12:59:17 (27788): Guest Log: -rwxrwxrwx. 1 root root   5416960 Jan 31 23:59 result.tar.gz
2025-02-01 12:59:17 (27788): Guest Log: -rwxrwxrwx. 1 root root     17569 Jan 29 01:54 start_atlas.sh
2025-02-01 12:59:17 (27788): Guest Log:  *** Success! Shutting down the machine. ***
2025-02-01 12:59:17 (27788): VM Completion File Detected.
2025-02-01 12:59:17 (27788): Powering off VM.
2025-02-01 12:59:18 (27788): Successfully stopped VM.
2025-02-01 12:59:18 (27788): Deregistering VM. (boinc_404134dce18d3284, slot#6)
2025-02-01 12:59:18 (27788): Removing network bandwidth throttle group from VM.
2025-02-01 12:59:18 (27788): Removing VM from VirtualBox.
12:59:23 (27788): called boinc_finish(0)

</stderr_txt>
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