Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
setpriority: Permission denied
2025-01-28 20:58:45 (44363): Detected: vboxwrapper 26206
2025-01-28 20:58:45 (44363): Detected: BOINC client v8.0.2
2025-01-28 20:58:45 (44363): Detected: VirtualBox VboxManage Interface (Version: 7.0.22)
2025-01-28 20:58:45 (44363): Detected: Sandbox Configuration Enabled
2025-01-28 20:58:45 (44363): Successfully copied 'init_data.xml' to the shared directory.
2025-01-28 20:58:46 (44363): Create VM. (boinc_5d4ca4f931f63f61, slot#3)
2025-01-28 20:58:46 (44363): Setting Memory Size for VM. (4800MB)
2025-01-28 20:58:46 (44363): Setting CPU Count for VM. (8)
2025-01-28 20:58:46 (44363): Setting Chipset Options for VM.
2025-01-28 20:58:46 (44363): Setting Graphics Controller Options for VM.
2025-01-28 20:58:46 (44363): Setting Boot Options for VM.
2025-01-28 20:58:46 (44363): Setting Network Configuration for NAT.
2025-01-28 20:58:46 (44363): Enabling VM Network Access.
2025-01-28 20:58:46 (44363): Disabling USB Support for VM.
2025-01-28 20:58:47 (44363): Disabling COM Port Support for VM.
2025-01-28 20:58:47 (44363): Disabling Audio Support for VM.
2025-01-28 20:58:47 (44363): Disabling Clipboard Support for VM.
2025-01-28 20:58:47 (44363): Disabling Drag and Drop Support for VM.
2025-01-28 20:58:47 (44363): Adding storage controller(s) to VM.
2025-01-28 20:58:47 (44363): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-01-28 20:58:49 (44363): Adding VirtualBox Guest Additions to VM.
2025-01-28 20:58:49 (44363): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-01-28 20:58:49 (44363): forwarding host port 53748 to guest port 80
2025-01-28 20:58:49 (44363): Enabling remote desktop for VM.
2025-01-28 20:58:50 (44363): Enabling shared directory for VM.
2025-01-28 20:58:50 (44363): Starting VM using VBoxManage interface. (boinc_5d4ca4f931f63f61, slot#3)
2025-01-28 20:58:56 (44363): Successfully started VM. (PID = '44454')
2025-01-28 20:58:56 (44363): Reporting VM Process ID to BOINC.
2025-01-28 20:58:56 (44363): Guest Log: BIOS: VirtualBox 7.0.22
2025-01-28 20:58:56 (44363): Guest Log: CPUID EDX: 0x178bfbff
2025-01-28 20:58:56 (44363): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-01-28 20:58:56 (44363): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-01-28 20:58:56 (44363): VM state change detected. (old = 'poweredoff', new = 'running')
2025-01-28 20:58:56 (44363): Detected: Web Application Enabled (http://localhost:53748)
2025-01-28 20:58:56 (44363): Detected: Remote Desktop Enabled (localhost:53749)
2025-01-28 20:58:56 (44363): Preference change detected
2025-01-28 20:58:56 (44363): Setting CPU throttle for VM. (100%)
2025-01-28 20:58:56 (44363): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-01-28 20:58:58 (44363): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-01-28 20:58:58 (44363): Guest Log: BIOS: Booting from Hard Disk...
2025-01-28 20:59:02 (44363): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-01-28 20:59:02 (44363): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-01-28 20:59:02 (44363): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-01-28 20:59:02 (44363): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-01-28 20:59:02 (44363): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-01-28 20:59:02 (44363): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-01-28 20:59:02 (44363): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-01-28 20:59:02 (44363): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-01-28 20:59:02 (44363): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-01-28 20:59:02 (44363): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-01-28 20:59:02 (44363): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-01-28 20:59:02 (44363): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-01-28 20:59:02 (44363): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-01-28 20:59:02 (44363): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-01-28 20:59:02 (44363): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-01-28 20:59:02 (44363): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-01-28 20:59:02 (44363): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-01-28 20:59:02 (44363): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-01-28 20:59:02 (44363): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-01-28 20:59:02 (44363): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-01-28 20:59:02 (44363): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-01-28 20:59:02 (44363): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-01-28 20:59:02 (44363): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-01-28 20:59:02 (44363): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-01-28 20:59:02 (44363): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-01-28 20:59:02 (44363): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-01-28 20:59:02 (44363): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-01-28 20:59:02 (44363): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-01-28 20:59:02 (44363): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-01-28 20:59:02 (44363): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-01-28 20:59:02 (44363): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-01-28 20:59:02 (44363): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-01-28 20:59:10 (44363): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-01-28 20:59:10 (44363): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-01-28 20:59:22 (44363): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-01-28 20:59:22 (44363): Guest Log: 00:00:00.000308 main     Log opened 2025-01-29T01:59:19.960335000Z
2025-01-28 20:59:22 (44363): Guest Log: 00:00:00.000536 main     OS Product: Linux
2025-01-28 20:59:22 (44363): Guest Log: 00:00:00.000599 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-01-28 20:59:22 (44363): Guest Log: 00:00:00.000646 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-01-28 20:59:22 (44363): Guest Log: 00:00:00.000696 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-01-28 20:59:22 (44363): Guest Log: 00:00:00.000697 main     Process ID: 1367
2025-01-28 20:59:22 (44363): Guest Log: 00:00:00.000698 main     Package type: LINUX_64BITS_GENERIC
2025-01-28 20:59:22 (44363): Guest Log: 00:00:00.004701 main     5.2.32 r132073 started. Verbose level = 0
2025-01-28 20:59:23 (44363): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-01-28 20:59:23 (44363): Guest Log: [INFO] Mounting shared directory
2025-01-28 20:59:23 (44363): Guest Log: [INFO] Checking for init_data.xml
2025-01-28 20:59:27 (44363): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-01-28 20:59:27 (44363): Guest Log: [INFO] Detected branch: prod
2025-01-28 20:59:27 (44363): Guest Log: This is the prod version of the ATLAS job wrapper
2025-01-28 20:59:27 (44363): Guest Log: Copying input files
2025-01-28 20:59:33 (44363): Guest Log: Copied input files into RunAtlas.
2025-01-28 20:59:33 (44363): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-01-28 20:59:33 (44363): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-01-28 20:59:33 (44363): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-01-28 20:59:33 (44363): Guest Log: Further information can be found at the LHC@home message board.
2025-01-28 20:59:42 (44363): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-01-28 20:59:42 (44363): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-01-28 20:59:43 (44363): Guest Log: 2.6.3.0 1644 0 30148 142076 4 1 3117296 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-01-28 20:59:44 (44363): Guest Log: copied the webapp to /var/www
2025-01-28 20:59:44 (44363): Guest Log: ATHENA_PROC_NUMBER=8
2025-01-28 20:59:44 (44363): Guest Log: ATHENA_CORE_NUMBER=8
2025-01-28 20:59:44 (44363): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-01-28 20:59:44 (44363): Guest Log:  *** Starting ATLAS job. (PandaID=6493649177 taskID=43078907) ***
2025-01-28 21:13:24 (44363): VM state change detected. (old = 'running', new = 'paused')
2025-01-28 21:13:44 (44363): VM state change detected. (old = 'paused', new = 'running')
2025-01-28 22:39:17 (44363): Status Report: Elapsed Time: '6000.000000'
2025-01-28 22:39:17 (44363): Status Report: CPU Time: '31900.030000'
2025-01-29 00:19:18 (44363): VM state change detected. (old = 'running', new = 'paused')
2025-01-29 00:19:39 (44363): VM state change detected. (old = 'paused', new = 'running')
2025-01-29 00:19:39 (44363): Status Report: Elapsed Time: '12000.000000'
2025-01-29 00:19:39 (44363): Status Report: CPU Time: '74134.990000'
2025-01-29 00:21:22 (44363): VM state change detected. (old = 'running', new = 'paused')
2025-01-29 00:21:42 (44363): VM state change detected. (old = 'paused', new = 'running')
2025-01-29 00:40:36 (44363): VM state change detected. (old = 'running', new = 'paused')
2025-01-29 00:40:57 (44363): VM state change detected. (old = 'paused', new = 'running')
2025-01-29 00:59:39 (44363): VM state change detected. (old = 'running', new = 'paused')
2025-01-29 01:00:00 (44363): VM state change detected. (old = 'paused', new = 'running')
2025-01-29 02:00:44 (44363): Status Report: Elapsed Time: '18000.000000'
2025-01-29 02:00:44 (44363): Status Report: CPU Time: '116104.210000'
2025-01-29 02:29:12 (44363): VM state change detected. (old = 'running', new = 'paused')
2025-01-29 02:29:32 (44363): VM state change detected. (old = 'paused', new = 'running')
2025-01-29 02:44:19 (44363): Guest Log:  *** Job finished ***
2025-01-29 02:44:19 (44363): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-01-29 02:44:19 (44363): Guest Log: 2025-01-29 07:42:31,811 | INFO     | [payload] run_realtimelog thread has finished
2025-01-29 02:44:19 (44363): Guest Log: 2025-01-29 07:42:32,213 | INFO     | [data] copytool_out thread has finished
2025-01-29 02:44:19 (44363): Guest Log: 2025-01-29 07:42:33,387 | INFO     | [data] queue_monitor thread has finished
2025-01-29 02:44:19 (44363): Guest Log: 2025-01-29 07:42:33,727 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139884580316992)>', '<ExcThread(monitor, started 139883930711808)>']
2025-01-29 02:44:19 (44363): Guest Log: 2025-01-29 07:42:34,389 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-01-29 02:44:19 (44363): Guest Log: 2025-01-29 07:42:34,389 | INFO     | [monitor] control thread has ended
2025-01-29 02:44:19 (44363): Guest Log: 2025-01-29 07:42:38,732 | INFO     | all workflow threads have been joined
2025-01-29 02:44:19 (44363): Guest Log: 2025-01-29 07:42:38,733 | INFO     | end of generic workflow (traces error code: 0)
2025-01-29 02:44:19 (44363): Guest Log: 2025-01-29 07:42:38,733 | INFO     | traces error code: 0
2025-01-29 02:44:19 (44363): Guest Log: 2025-01-29 07:42:38,734 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-01-29 02:44:19 (44363): Guest Log: 2025-01-29 07:42:38,893 [wrapper] ==== pilot stdout END ====
2025-01-29 02:44:19 (44363): Guest Log: 2025-01-29 07:42:38,903 [wrapper] ==== wrapper stdout RESUME ====
2025-01-29 02:44:19 (44363): Guest Log: 2025-01-29 07:42:38,914 [wrapper] pilotpid: 6030
2025-01-29 02:44:19 (44363): Guest Log: 2025-01-29 07:42:38,925 [wrapper] Pilot exit status: 0
2025-01-29 02:44:19 (44363): Guest Log: 2025-01-29 07:42:39,023 [wrapper] pandaids: 6493649177
2025-01-29 02:44:19 (44363): Guest Log: 2025-01-29 07:42:39,128 [wrapper] cleanup supervisor_pilot 18842 6031
2025-01-29 02:44:19 (44363): Guest Log: 2025-01-29 07:42:39,144 [wrapper] Test setup, not cleaning
2025-01-29 02:44:19 (44363): Guest Log: 2025-01-29 07:42:39,182 [wrapper] apfmon messages muted
2025-01-29 02:44:19 (44363): Guest Log: 2025-01-29 07:42:39,202 [wrapper] ==== wrapper stdout END ====
2025-01-29 02:44:19 (44363): Guest Log: 2025-01-29 07:42:39,219 [wrapper] ==== wrapper stderr END ====
2025-01-29 02:44:19 (44363): Guest Log:  *** Error codes and diagnostics ***
2025-01-29 02:44:19 (44363): Guest Log:     "exeErrorCode": 0,
2025-01-29 02:44:19 (44363): Guest Log:     "exeErrorDiag": "",
2025-01-29 02:44:19 (44363): Guest Log:     "pilotErrorCode": 0,
2025-01-29 02:44:19 (44363): Guest Log:     "pilotErrorDiag": "",
2025-01-29 02:44:19 (44363): Guest Log:  *** Listing of results directory ***
2025-01-29 02:44:19 (44363): Guest Log: total 304316
2025-01-29 02:44:19 (44363): Guest Log: -rw-r--r--. 1 atlas atlas    491065 Jan 28 19:44 pilot3.tar.gz
2025-01-29 02:44:19 (44363): Guest Log: -rwx------. 1 atlas atlas     34924 Jan 28 19:58 runpilot2-wrapper.sh
2025-01-29 02:44:19 (44363): Guest Log: -rw-r--r--. 1 atlas atlas      5117 Jan 28 19:58 queuedata.json
2025-01-29 02:44:19 (44363): Guest Log: -rw-r-----. 1 atlas atlas     17569 Jan 29 01:59 start_atlas.sh
2025-01-29 02:44:19 (44363): Guest Log: -rw-r-----. 1 atlas atlas    503476 Jan 29 01:59 input.tar.gz
2025-01-29 02:44:19 (44363): Guest Log: -rw-r--r--. 1 atlas atlas      6064 Jan 29 01:59 init_data.xml
2025-01-29 02:44:19 (44363): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jan 29 01:59 EVNT.43078905._000305.pool.root.1 -> /data/./ATLAS.root_0
2025-01-29 02:44:19 (44363): Guest Log: -rw-r--r--. 1 atlas atlas      2521 Jan 29 01:59 pandaJob.out
2025-01-29 02:44:19 (44363): Guest Log: -rw-------. 1 atlas atlas       424 Jan 29 01:59 setup.sh.local
2025-01-29 02:44:19 (44363): Guest Log: -rw-------. 1 atlas atlas    968586 Jan 29 02:00 agis_schedconf.cvmfs.json
2025-01-29 02:44:19 (44363): Guest Log: drwx------. 4 atlas atlas      4096 Jan 29 02:00 pilot3
2025-01-29 02:44:19 (44363): Guest Log: -rw-------. 1 atlas atlas 304610619 Jan 29 07:40 HITS.43078907._008114.pool.root.1
2025-01-29 02:44:20 (44363): Guest Log: -rw-------. 1 atlas atlas      1035 Jan 29 07:41 memory_monitor_summary.json
2025-01-29 02:44:20 (44363): Guest Log: -rw-------. 1 atlas atlas        95 Jan 29 07:41 pilot_heartbeat.json
2025-01-29 02:44:20 (44363): Guest Log: -rw-------. 1 atlas atlas   1580185 Jan 29 07:42 agis_ddmendpoints.agis.ALL.json
2025-01-29 02:44:20 (44363): Guest Log: -rw-------. 1 atlas atlas    396471 Jan 29 07:42 log.43078907._008114.job.log.tgz.1
2025-01-29 02:44:20 (44363): Guest Log: -rw-------. 1 atlas atlas      7757 Jan 29 07:42 heartbeat.json
2025-01-29 02:44:20 (44363): Guest Log: -rw-------. 1 atlas atlas      4398 Jan 29 07:42 pilotlog.txt
2025-01-29 02:44:20 (44363): Guest Log: -rw-------. 1 atlas atlas   1250980 Jan 29 07:42 log.43078907._008114.job.log.1
2025-01-29 02:44:20 (44363): Guest Log: -rw-------. 1 atlas atlas       357 Jan 29 07:42 output.list
2025-01-29 02:44:20 (44363): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jan 29 07:42 runtime_log
2025-01-29 02:44:20 (44363): Guest Log: -rw-------. 1 atlas atlas   1669120 Jan 29 07:42 result.tar.gz
2025-01-29 02:44:20 (44363): Guest Log: -rw-r--r--. 1 atlas atlas     10957 Jan 29 07:42 runtime_log.err
2025-01-29 02:44:20 (44363): Guest Log: -rw-------. 1 atlas atlas       666 Jan 29 07:42 HalKDmFu6w6n9Rq4apOajLDm4fhM0noT9bVoFjIUDmdxGKDmxaahvm.diag
2025-01-29 02:44:20 (44363): Guest Log: Looking for outputfile HITS.43078907._008114.pool.root.1
2025-01-29 02:44:20 (44363): Guest Log: HITS file was successfully produced
2025-01-29 02:44:20 (44363): Guest Log: -rw-------. 1 atlas atlas 304610619 Jan 29 07:40 /home/atlas/RunAtlas/HITS.43078907._008114.pool.root.1
2025-01-29 02:44:20 (44363): Guest Log: Successfully finished the ATLAS job!
2025-01-29 02:44:20 (44363): Guest Log: Copying the results back to the shared directory!
2025-01-29 02:44:20 (44363): Guest Log:  *** Contents of shared directory: ***
2025-01-29 02:44:20 (44363): Guest Log: total 329196
2025-01-29 02:44:20 (44363): Guest Log: -rw-rw----. 1 root root 334891242 Jan 29 01:58 ATLAS.root_0
2025-01-29 02:44:20 (44363): Guest Log: -rw-rw-r--. 1 root root      6064 Jan 29 01:58 init_data.xml
2025-01-29 02:44:20 (44363): Guest Log: -rw-rw----. 1 root root    503476 Jan 29 01:58 input.tar.gz
2025-01-29 02:44:20 (44363): Guest Log: -rw-r--r--. 1 root root   1669120 Jan 29  2025 result.tar.gz
2025-01-29 02:44:20 (44363): Guest Log: -rw-rw----. 1 root root     17569 Jan 29 01:58 start_atlas.sh
2025-01-29 02:44:20 (44363): Guest Log:  *** Success! Shutting down the machine. ***
2025-01-29 02:44:20 (44363): VM Completion File Detected.
2025-01-29 02:44:20 (44363): Powering off VM.
2025-01-29 02:44:21 (44363): Successfully stopped VM.
2025-01-29 02:44:21 (44363): Deregistering VM. (boinc_5d4ca4f931f63f61, slot#3)
2025-01-29 02:44:21 (44363): Removing network bandwidth throttle group from VM.
2025-01-29 02:44:21 (44363): Removing VM from VirtualBox.
02:44:26 (44363): called boinc_finish(0)

</stderr_txt>
]]>

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