Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-01-28 15:27:20 (800651): Detected: vboxwrapper 26206
2025-01-28 15:27:20 (800651): Detected: BOINC client v8.0.2
2025-01-28 15:27:21 (800651): Detected: VirtualBox VboxManage Interface (Version: 7.0.20)
2025-01-28 15:27:21 (800651): Successfully copied 'init_data.xml' to the shared directory.
2025-01-28 15:27:21 (800651): Create VM. (boinc_a27484162095404e, slot#1)
2025-01-28 15:27:21 (800651): Setting Memory Size for VM. (4800MB)
2025-01-28 15:27:21 (800651): Setting CPU Count for VM. (8)
2025-01-28 15:27:21 (800651): Setting Chipset Options for VM.
2025-01-28 15:27:21 (800651): Setting Graphics Controller Options for VM.
2025-01-28 15:27:21 (800651): Setting Boot Options for VM.
2025-01-28 15:27:21 (800651): Setting Network Configuration for NAT.
2025-01-28 15:27:21 (800651): Enabling VM Network Access.
2025-01-28 15:27:22 (800651): Disabling USB Support for VM.
2025-01-28 15:27:22 (800651): Disabling COM Port Support for VM.
2025-01-28 15:27:22 (800651): Disabling LPT Port Support for VM.
2025-01-28 15:27:22 (800651): Disabling Audio Support for VM.
2025-01-28 15:27:22 (800651): Disabling Clipboard Support for VM.
2025-01-28 15:27:22 (800651): Disabling Drag and Drop Support for VM.
2025-01-28 15:27:22 (800651): Adding storage controller(s) to VM.
2025-01-28 15:27:22 (800651): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-01-28 15:27:24 (800651): Adding VirtualBox Guest Additions to VM.
2025-01-28 15:27:24 (800651): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-01-28 15:27:24 (800651): forwarding host port 41801 to guest port 80
2025-01-28 15:27:24 (800651): Enabling remote desktop for VM.
2025-01-28 15:27:24 (800651): Enabling shared directory for VM.
2025-01-28 15:27:24 (800651): Starting VM using VBoxManage interface. (boinc_a27484162095404e, slot#1)
2025-01-28 15:27:25 (800651): Successfully started VM. (PID = '801262')
2025-01-28 15:27:25 (800651): Reporting VM Process ID to BOINC.
2025-01-28 15:27:25 (800651): Guest Log: BIOS: VirtualBox 7.0.20
2025-01-28 15:27:25 (800651): Guest Log: CPUID EDX: 0x178bfbff
2025-01-28 15:27:25 (800651): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-01-28 15:27:25 (800651): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-01-28 15:27:25 (800651): VM state change detected. (old = 'poweredoff', new = 'running')
2025-01-28 15:27:25 (800651): Detected: Web Application Enabled (http://localhost:41801)
2025-01-28 15:27:25 (800651): Detected: Remote Desktop Enabled (localhost:60023)
2025-01-28 15:27:25 (800651): Preference change detected
2025-01-28 15:27:25 (800651): Setting CPU throttle for VM. (50%)
2025-01-28 15:27:26 (800651): Setting network throttle for VM. (1024KB)
2025-01-28 15:27:26 (800651): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-01-28 15:27:27 (800651): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-01-28 15:27:27 (800651): Guest Log: BIOS: Booting from Hard Disk...
2025-01-28 15:27:30 (800651): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-01-28 15:27:30 (800651): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-01-28 15:27:30 (800651): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-01-28 15:27:30 (800651): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-01-28 15:27:30 (800651): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-01-28 15:27:30 (800651): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-01-28 15:27:30 (800651): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-01-28 15:27:30 (800651): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-01-28 15:27:30 (800651): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-01-28 15:27:30 (800651): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-01-28 15:27:30 (800651): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-01-28 15:27:30 (800651): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-01-28 15:27:30 (800651): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-01-28 15:27:30 (800651): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-01-28 15:27:30 (800651): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-01-28 15:27:30 (800651): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-01-28 15:27:30 (800651): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-01-28 15:27:30 (800651): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-01-28 15:27:30 (800651): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-01-28 15:27:30 (800651): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-01-28 15:27:30 (800651): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-01-28 15:27:30 (800651): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-01-28 15:27:30 (800651): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-01-28 15:27:30 (800651): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-01-28 15:27:30 (800651): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-01-28 15:27:30 (800651): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-01-28 15:27:30 (800651): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-01-28 15:27:30 (800651): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-01-28 15:27:30 (800651): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-01-28 15:27:30 (800651): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-01-28 15:27:30 (800651): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-01-28 15:27:30 (800651): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-01-28 15:27:38 (800651): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-01-28 15:27:38 (800651): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-01-28 15:27:45 (800651): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-01-28 15:27:45 (800651): Guest Log: 00:00:00.000281 main     Log opened 2025-01-28T13:27:43.038430000Z
2025-01-28 15:27:45 (800651): Guest Log: 00:00:00.000390 main     OS Product: Linux
2025-01-28 15:27:45 (800651): Guest Log: 00:00:00.000404 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-01-28 15:27:45 (800651): Guest Log: 00:00:00.000415 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-01-28 15:27:45 (800651): Guest Log: 00:00:00.000425 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-01-28 15:27:45 (800651): Guest Log: 00:00:00.000426 main     Process ID: 1363
2025-01-28 15:27:45 (800651): Guest Log: 00:00:00.000426 main     Package type: LINUX_64BITS_GENERIC
2025-01-28 15:27:45 (800651): Guest Log: 00:00:00.004120 main     5.2.32 r132073 started. Verbose level = 0
2025-01-28 15:27:45 (800651): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-01-28 15:27:45 (800651): Guest Log: [INFO] Mounting shared directory
2025-01-28 15:27:45 (800651): Guest Log: [INFO] Checking for init_data.xml
2025-01-28 15:29:33 (800651): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-01-28 15:29:33 (800651): Guest Log: [INFO] Detected branch: prod
2025-01-28 15:29:33 (800651): Guest Log: This is the prod version of the ATLAS job wrapper
2025-01-28 15:29:33 (800651): Guest Log: Copying input files
2025-01-28 15:29:34 (800651): Guest Log: Copied input files into RunAtlas.
2025-01-28 15:29:34 (800651): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-01-28 15:29:34 (800651): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-01-28 15:29:34 (800651): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-01-28 15:29:34 (800651): Guest Log: Further information can be found at the LHC@home message board.
2025-01-28 15:31:13 (800651): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-01-28 15:31:13 (800651): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-01-28 15:31:13 (800651): Guest Log: 2.6.3.0 1680 2 30160 142057 4 1 3117296 4096000 0 65024 0 0 n/a 0 0 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-01-28 15:31:14 (800651): Guest Log: copied the webapp to /var/www
2025-01-28 15:31:14 (800651): Guest Log: ATHENA_PROC_NUMBER=8
2025-01-28 15:31:14 (800651): Guest Log: ATHENA_CORE_NUMBER=8
2025-01-28 15:31:19 (800651): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-01-28 15:31:19 (800651): Guest Log:  *** Starting ATLAS job. (PandaID=6493526171 taskID=43078907) ***
2025-01-28 17:06:27 (800651): Status Report: Elapsed Time: '6000.000000'
2025-01-28 17:06:27 (800651): Status Report: CPU Time: '11383.460000'
2025-01-28 18:45:30 (800651): Status Report: Elapsed Time: '12000.000000'
2025-01-28 18:45:30 (800651): Status Report: CPU Time: '34136.510000'
2025-01-28 19:02:18 (800651): Guest Log:  *** Job finished ***
2025-01-28 19:02:18 (800651): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-01-28 19:02:18 (800651): Guest Log: 2025-01-28 17:00:40,399 | INFO     | [data] queue_monitor thread has finished
2025-01-28 19:02:18 (800651): Guest Log: 2025-01-28 17:00:46,382 | INFO     | job.realtimelogging is not enabled
2025-01-28 19:02:18 (800651): Guest Log: 2025-01-28 17:00:47,399 | INFO     | [payload] run_realtimelog thread has finished
2025-01-28 19:02:18 (800651): Guest Log: 2025-01-28 17:00:49,414 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139714646550336)>', '<ExcThread(monitor, started 139714036213504)>']
2025-01-28 19:02:18 (800651): Guest Log: 2025-01-28 17:00:49,438 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-01-28 19:02:18 (800651): Guest Log: 2025-01-28 17:00:49,438 | INFO     | [monitor] control thread has ended
2025-01-28 19:02:18 (800651): Guest Log: 2025-01-28 17:00:54,492 | INFO     | all workflow threads have been joined
2025-01-28 19:02:18 (800651): Guest Log: 2025-01-28 17:00:54,492 | INFO     | end of generic workflow (traces error code: 0)
2025-01-28 19:02:18 (800651): Guest Log: 2025-01-28 17:00:54,492 | INFO     | traces error code: 0
2025-01-28 19:02:18 (800651): Guest Log: 2025-01-28 17:00:54,492 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-01-28 19:02:18 (800651): Guest Log: 2025-01-28 17:00:54,658 [wrapper] ==== pilot stdout END ====
2025-01-28 19:02:18 (800651): Guest Log: 2025-01-28 17:00:54,676 [wrapper] ==== wrapper stdout RESUME ====
2025-01-28 19:02:18 (800651): Guest Log: 2025-01-28 17:00:54,697 [wrapper] pilotpid: 6208
2025-01-28 19:02:18 (800651): Guest Log: 2025-01-28 17:00:54,711 [wrapper] Pilot exit status: 0
2025-01-28 19:02:18 (800651): Guest Log: 2025-01-28 17:00:54,954 [wrapper] pandaids: 6493526171
2025-01-28 19:02:18 (800651): Guest Log: 2025-01-28 17:00:55,065 [wrapper] cleanup supervisor_pilot 10185 6209
2025-01-28 19:02:18 (800651): Guest Log: 2025-01-28 17:00:55,091 [wrapper] Test setup, not cleaning
2025-01-28 19:02:18 (800651): Guest Log: 2025-01-28 17:00:55,132 [wrapper] apfmon messages muted
2025-01-28 19:02:18 (800651): Guest Log: 2025-01-28 17:00:55,142 [wrapper] ==== wrapper stdout END ====
2025-01-28 19:02:18 (800651): Guest Log: 2025-01-28 17:00:55,146 [wrapper] ==== wrapper stderr END ====
2025-01-28 19:02:18 (800651): Guest Log:  *** Error codes and diagnostics ***
2025-01-28 19:02:18 (800651): Guest Log:     "exeErrorCode": 0,
2025-01-28 19:02:18 (800651): Guest Log:     "exeErrorDiag": "",
2025-01-28 19:02:18 (800651): Guest Log:     "pilotErrorCode": 0,
2025-01-28 19:02:18 (800651): Guest Log:     "pilotErrorDiag": "",
2025-01-28 19:02:18 (800651): Guest Log:  *** Listing of results directory ***
2025-01-28 19:02:18 (800651): Guest Log: total 314876
2025-01-28 19:02:18 (800651): Guest Log: -rw-r--r--. 1 atlas atlas    491065 Jan 28 11:39 pilot3.tar.gz
2025-01-28 19:02:18 (800651): Guest Log: -rw-r--r--. 1 atlas atlas      5117 Jan 28 11:50 queuedata.json
2025-01-28 19:02:18 (800651): Guest Log: -rwx------. 1 atlas atlas     34924 Jan 28 11:51 runpilot2-wrapper.sh
2025-01-28 19:02:18 (800651): Guest Log: -rw-r--r--. 1 atlas atlas    503477 Jan 28 13:29 input.tar.gz
2025-01-28 19:02:18 (800651): Guest Log: -rw-r--r--. 1 atlas atlas     17569 Jan 28 13:29 start_atlas.sh
2025-01-28 19:02:18 (800651): Guest Log: -rw-r--r--. 1 atlas atlas      7106 Jan 28 13:29 init_data.xml
2025-01-28 19:02:18 (800651): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jan 28 13:29 EVNT.43078905._000113.pool.root.1 -> /data/./ATLAS.root_0
2025-01-28 19:02:18 (800651): Guest Log: -rw-r--r--. 1 atlas atlas      2521 Jan 28 13:31 pandaJob.out
2025-01-28 19:02:18 (800651): Guest Log: -rw-------. 1 atlas atlas       424 Jan 28 13:32 setup.sh.local
2025-01-28 19:02:18 (800651): Guest Log: -rw-------. 1 atlas atlas    968269 Jan 28 13:44 agis_schedconf.cvmfs.json
2025-01-28 19:02:18 (800651): Guest Log: drwx------. 4 atlas atlas      4096 Jan 28 13:44 pilot3
2025-01-28 19:02:18 (800651): Guest Log: -rw-------. 1 atlas atlas 316195655 Jan 28 16:59 HITS.43078907._002598.pool.root.1
2025-01-28 19:02:18 (800651): Guest Log: -rw-------. 1 atlas atlas      1036 Jan 28 17:00 memory_monitor_summary.json
2025-01-28 19:02:18 (800651): Guest Log: -rw-------. 1 atlas atlas   1580206 Jan 28 17:00 agis_ddmendpoints.agis.ALL.json
2025-01-28 19:02:18 (800651): Guest Log: -rw-------. 1 atlas atlas    366331 Jan 28 17:00 log.43078907._002598.job.log.tgz.1
2025-01-28 19:02:18 (800651): Guest Log: -rw-------. 1 atlas atlas        95 Jan 28 17:00 pilot_heartbeat.json
2025-01-28 19:02:18 (800651): Guest Log: -rw-------. 1 atlas atlas      7754 Jan 28 17:00 heartbeat.json
2025-01-28 19:02:18 (800651): Guest Log: -rw-------. 1 atlas atlas      4470 Jan 28 17:00 pilotlog.txt
2025-01-28 19:02:18 (800651): Guest Log: -rw-------. 1 atlas atlas    895905 Jan 28 17:00 log.43078907._002598.job.log.1
2025-01-28 19:02:18 (800651): Guest Log: -rw-------. 1 atlas atlas       357 Jan 28 17:00 output.list
2025-01-28 19:02:18 (800651): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jan 28 17:00 runtime_log
2025-01-28 19:02:18 (800651): Guest Log: -rw-------. 1 atlas atlas   1280000 Jan 28 17:00 result.tar.gz
2025-01-28 19:02:18 (800651): Guest Log: -rw-r--r--. 1 atlas atlas     10969 Jan 28 17:00 runtime_log.err
2025-01-28 19:02:18 (800651): Guest Log: -rw-------. 1 atlas atlas       668 Jan 28 17:00 qEaMDm6Izw6nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmsFGKDmyZmKFo.diag
2025-01-28 19:02:18 (800651): Guest Log: Looking for outputfile HITS.43078907._002598.pool.root.1
2025-01-28 19:02:18 (800651): Guest Log: HITS file was successfully produced
2025-01-28 19:02:18 (800651): Guest Log: -rw-------. 1 atlas atlas 316195655 Jan 28 16:59 /home/atlas/RunAtlas/HITS.43078907._002598.pool.root.1
2025-01-28 19:02:18 (800651): Guest Log: Successfully finished the ATLAS job!
2025-01-28 19:02:18 (800651): Guest Log: Copying the results back to the shared directory!
2025-01-28 19:02:18 (800651): Guest Log:  *** Contents of shared directory: ***
2025-01-28 19:02:18 (800651): Guest Log: total 325888
2025-01-28 19:02:18 (800651): Guest Log: -rw-r--r--. 1 root root 331894157 Jan 28 13:27 ATLAS.root_0
2025-01-28 19:02:18 (800651): Guest Log: -rw-r--r--. 1 root root      7106 Jan 28 13:27 init_data.xml
2025-01-28 19:02:18 (800651): Guest Log: -rw-r--r--. 1 root root    503477 Jan 28 13:27 input.tar.gz
2025-01-28 19:02:18 (800651): Guest Log: -rw-r--r--. 1 root root   1280000 Jan 28  2025 result.tar.gz
2025-01-28 19:02:18 (800651): Guest Log: -rw-r--r--. 1 root root     17569 Jan 28 13:27 start_atlas.sh
2025-01-28 19:02:18 (800651): Guest Log:  *** Success! Shutting down the machine. ***
2025-01-28 19:02:18 (800651): VM Completion File Detected.
2025-01-28 19:02:18 (800651): Powering off VM.
2025-01-28 19:02:18 (800651): Successfully stopped VM.
2025-01-28 19:02:18 (800651): Deregistering VM. (boinc_a27484162095404e, slot#1)
2025-01-28 19:02:18 (800651): Removing network bandwidth throttle group from VM.
2025-01-28 19:02:18 (800651): Removing VM from VirtualBox.
19:02:23 (800651): called boinc_finish(0)

</stderr_txt>
]]>

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