Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
2025-02-01 06:29:33 (3324): Detected: vboxwrapper 26206
2025-02-01 06:29:33 (3324): Detected: BOINC client v7.24.1
2025-02-01 06:29:34 (3324): Detected: VirtualBox VboxManage Interface (Version: 7.0.14)
2025-02-01 06:29:34 (3324): Successfully copied 'init_data.xml' to the shared directory.
2025-02-01 06:29:35 (3324): Create VM. (boinc_9da9989358e9bd19, slot#0)
2025-02-01 06:29:35 (3324): Setting Memory Size for VM. (4600MB)
2025-02-01 06:29:35 (3324): Setting CPU Count for VM. (6)
2025-02-01 06:29:36 (3324): Setting Chipset Options for VM.
2025-02-01 06:29:36 (3324): Setting Graphics Controller Options for VM.
2025-02-01 06:29:36 (3324): Setting Boot Options for VM.
2025-02-01 06:29:37 (3324): Setting Network Configuration for NAT.
2025-02-01 06:29:37 (3324): Enabling VM Network Access.
2025-02-01 06:29:37 (3324): Disabling USB Support for VM.
2025-02-01 06:29:37 (3324): Disabling COM Port Support for VM.
2025-02-01 06:29:38 (3324): Disabling LPT Port Support for VM.
2025-02-01 06:29:38 (3324): Disabling Audio Support for VM.
2025-02-01 06:29:38 (3324): Disabling Clipboard Support for VM.
2025-02-01 06:29:38 (3324): Disabling Drag and Drop Support for VM.
2025-02-01 06:29:39 (3324): Adding storage controller(s) to VM.
2025-02-01 06:29:39 (3324): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-02-01 06:29:42 (3324): Adding VirtualBox Guest Additions to VM.
2025-02-01 06:29:42 (3324): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-02-01 06:29:42 (3324): forwarding host port 11881 to guest port 80
2025-02-01 06:29:43 (3324): Enabling remote desktop for VM.
2025-02-01 06:29:43 (3324): Required extension pack not installed, remote desktop not enabled.
2025-02-01 06:29:43 (3324): Enabling shared directory for VM.
2025-02-01 06:29:43 (3324): Starting VM using VBoxManage interface. (boinc_9da9989358e9bd19, slot#0)
2025-02-01 06:29:50 (3324): Successfully started VM. (PID = '9776')
2025-02-01 06:29:50 (3324): Reporting VM Process ID to BOINC.
2025-02-01 06:29:50 (3324): Guest Log: BIOS: VirtualBox 7.0.14
2025-02-01 06:29:50 (3324): Guest Log: CPUID EDX: 0x178bfbff
2025-02-01 06:29:50 (3324): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-02-01 06:29:50 (3324): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-02-01 06:29:50 (3324): VM state change detected. (old = 'poweredoff', new = 'running')
2025-02-01 06:29:50 (3324): Detected: Web Application Enabled (http://localhost:11881)
2025-02-01 06:29:50 (3324): Preference change detected
2025-02-01 06:29:50 (3324): Setting CPU throttle for VM. (60%)
2025-02-01 06:29:50 (3324): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-02-01 06:29:52 (3324): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-02-01 06:29:52 (3324): Guest Log: BIOS: Booting from Hard Disk...
2025-02-01 06:29:56 (3324): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-02-01 06:29:56 (3324): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-02-01 06:29:56 (3324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-02-01 06:29:56 (3324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-02-01 06:29:56 (3324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-02-01 06:29:56 (3324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-02-01 06:29:56 (3324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-02-01 06:29:56 (3324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-02-01 06:29:56 (3324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-02-01 06:29:56 (3324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-02-01 06:29:56 (3324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-02-01 06:29:56 (3324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-02-01 06:29:56 (3324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-02-01 06:29:56 (3324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-02-01 06:29:56 (3324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-02-01 06:29:56 (3324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-02-01 06:29:56 (3324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-02-01 06:29:56 (3324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-02-01 06:29:56 (3324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-02-01 06:29:56 (3324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-02-01 06:29:56 (3324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-02-01 06:29:56 (3324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-02-01 06:29:56 (3324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-02-01 06:29:56 (3324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-02-01 06:29:56 (3324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-02-01 06:29:56 (3324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-02-01 06:29:56 (3324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-02-01 06:29:56 (3324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-02-01 06:29:56 (3324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-02-01 06:29:56 (3324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-02-01 06:29:56 (3324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-02-01 06:29:56 (3324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-02-01 06:30:02 (3324): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-02-01 06:30:02 (3324): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-02-01 06:30:10 (3324): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-02-01 06:30:10 (3324): Guest Log: 00:00:00.000396 main     Log opened 2025-02-01T06:30:09.207895000Z
2025-02-01 06:30:10 (3324): Guest Log: 00:00:00.000577 main     OS Product: Linux
2025-02-01 06:30:10 (3324): Guest Log: 00:00:00.000641 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-02-01 06:30:10 (3324): Guest Log: 00:00:00.000699 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-02-01 06:30:10 (3324): Guest Log: 00:00:00.000761 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-02-01 06:30:10 (3324): Guest Log: 00:00:00.000762 main     Process ID: 1335
2025-02-01 06:30:10 (3324): Guest Log: 00:00:00.000763 main     Package type: LINUX_64BITS_GENERIC
2025-02-01 06:30:10 (3324): Guest Log: 00:00:00.001540 main     5.2.32 r132073 started. Verbose level = 0
2025-02-01 06:30:10 (3324): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-02-01 06:30:10 (3324): Guest Log: [INFO] Mounting shared directory
2025-02-01 06:30:10 (3324): Guest Log: [INFO] Checking for init_data.xml
2025-02-01 06:30:20 (3324): Guest Log: 00:00:10.004041 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 589 329 754 000ns (GuestNow=1 738 387 819 880 858 000 ns GuestLast=1 738 391 409 210 612 000 ns fSetTimeLastLoop=true )
2025-02-01 06:30:27 (3324): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-02-01 06:30:27 (3324): Guest Log: [INFO] Detected branch: prod
2025-02-01 06:30:27 (3324): Guest Log: This is the prod version of the ATLAS job wrapper
2025-02-01 06:30:27 (3324): Guest Log: Copying input files
2025-02-01 06:30:30 (3324): Guest Log: Copied input files into RunAtlas.
2025-02-01 06:30:30 (3324): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-02-01 06:30:30 (3324): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-02-01 06:30:30 (3324): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-02-01 06:30:30 (3324): Guest Log: Further information can be found at the LHC@home message board.
2025-02-01 06:30:43 (3324): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-02-01 06:30:43 (3324): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-02-01 06:30:43 (3324): Guest Log: 2.6.3.0 1613 0 30156 142171 4 1 3117296 4096000 0 65024 0 0 n/a 0 0 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-02-01 06:30:43 (3324): Guest Log: copied the webapp to /var/www
2025-02-01 06:30:44 (3324): Guest Log: ATHENA_PROC_NUMBER=6
2025-02-01 06:30:44 (3324): Guest Log: ATHENA_CORE_NUMBER=6
2025-02-01 06:30:44 (3324): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-02-01 06:30:44 (3324): Guest Log:  *** Starting ATLAS job. (PandaID=6493522651 taskID=43078907) ***
2025-02-01 08:10:17 (3324): Status Report: Elapsed Time: '6000.210609'
2025-02-01 08:10:17 (3324): Status Report: CPU Time: '17784.078125'
2025-02-01 09:50:20 (3324): Status Report: Elapsed Time: '12000.210609'
2025-02-01 09:50:20 (3324): Status Report: CPU Time: '39522.578125'
2025-02-01 11:30:23 (3324): Status Report: Elapsed Time: '18000.210609'
2025-02-01 11:30:23 (3324): Status Report: CPU Time: '61251.703125'
2025-02-01 13:10:27 (3324): Status Report: Elapsed Time: '24000.210609'
2025-02-01 13:10:27 (3324): Status Report: CPU Time: '82967.531250'
2025-02-01 14:28:43 (3324): Guest Log:  *** Job finished ***
2025-02-01 14:28:43 (3324): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-02-01 14:28:43 (3324): Guest Log: 2025-02-01 13:28:26,645 | INFO     | [data] queue_monitor thread has finished
2025-02-01 14:28:43 (3324): Guest Log: 2025-02-01 13:28:33,668 | INFO     | job.realtimelogging is not enabled
2025-02-01 14:28:43 (3324): Guest Log: 2025-02-01 13:28:34,670 | INFO     | [payload] run_realtimelog thread has finished
2025-02-01 14:28:43 (3324): Guest Log: 2025-02-01 13:28:36,347 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140300924520256)>', '<ExcThread(monitor, started 140300634793728)>']
2025-02-01 14:28:43 (3324): Guest Log: 2025-02-01 13:28:37,107 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-02-01 14:28:43 (3324): Guest Log: 2025-02-01 13:28:37,108 | INFO     | [monitor] control thread has ended
2025-02-01 14:28:43 (3324): Guest Log: 2025-02-01 13:28:41,350 | INFO     | all workflow threads have been joined
2025-02-01 14:28:43 (3324): Guest Log: 2025-02-01 13:28:41,351 | INFO     | end of generic workflow (traces error code: 0)
2025-02-01 14:28:43 (3324): Guest Log: 2025-02-01 13:28:41,351 | INFO     | traces error code: 0
2025-02-01 14:28:43 (3324): Guest Log: 2025-02-01 13:28:41,352 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-02-01 14:28:43 (3324): Guest Log: 2025-02-01 13:28:41,520 [wrapper] ==== pilot stdout END ====
2025-02-01 14:28:43 (3324): Guest Log: 2025-02-01 13:28:41,525 [wrapper] ==== wrapper stdout RESUME ====
2025-02-01 14:28:43 (3324): Guest Log: 2025-02-01 13:28:41,530 [wrapper] pilotpid: 5979
2025-02-01 14:28:43 (3324): Guest Log: 2025-02-01 13:28:41,534 [wrapper] Pilot exit status: 0
2025-02-01 14:28:43 (3324): Guest Log: 2025-02-01 13:28:41,630 [wrapper] pandaids: 6493522651
2025-02-01 14:28:43 (3324): Guest Log: 2025-02-01 13:28:41,654 [wrapper] cleanup supervisor_pilot  2182 5980
2025-02-01 14:28:43 (3324): Guest Log: 2025-02-01 13:28:41,659 [wrapper] Test setup, not cleaning
2025-02-01 14:28:43 (3324): Guest Log: 2025-02-01 13:28:41,669 [wrapper] apfmon messages muted
2025-02-01 14:28:43 (3324): Guest Log: 2025-02-01 13:28:41,673 [wrapper] ==== wrapper stdout END ====
2025-02-01 14:28:43 (3324): Guest Log: 2025-02-01 13:28:41,677 [wrapper] ==== wrapper stderr END ====
2025-02-01 14:28:43 (3324): Guest Log:  *** Error codes and diagnostics ***
2025-02-01 14:28:43 (3324): Guest Log:     "exeErrorCode": 0,
2025-02-01 14:28:43 (3324): Guest Log:     "exeErrorDiag": "",
2025-02-01 14:28:43 (3324): Guest Log:     "pilotErrorCode": 0,
2025-02-01 14:28:43 (3324): Guest Log:     "pilotErrorDiag": "",
2025-02-01 14:28:43 (3324): Guest Log:  *** Listing of results directory ***
2025-02-01 14:28:43 (3324): Guest Log: total 311092
2025-02-01 14:28:43 (3324): Guest Log: -rw-r--r--. 1 atlas atlas    491065 Jan 28 11:21 pilot3.tar.gz
2025-02-01 14:28:43 (3324): Guest Log: -rwx------. 1 atlas atlas     34924 Jan 28 11:23 runpilot2-wrapper.sh
2025-02-01 14:28:43 (3324): Guest Log: -rw-r--r--. 1 atlas atlas      5117 Jan 28 11:23 queuedata.json
2025-02-01 14:28:43 (3324): Guest Log: -rwxr-xr-x. 1 atlas atlas      8863 Feb  1 05:30 init_data.xml
2025-02-01 14:28:43 (3324): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Feb  1 05:30 start_atlas.sh
2025-02-01 14:28:43 (3324): Guest Log: -rwxr-xr-x. 1 atlas atlas    503474 Feb  1 05:30 input.tar.gz
2025-02-01 14:28:43 (3324): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb  1 05:30 EVNT.43078905._000066.pool.root.1 -> /data/./ATLAS.root_0
2025-02-01 14:28:43 (3324): Guest Log: -rw-r--r--. 1 atlas atlas      2520 Feb  1 05:30 pandaJob.out
2025-02-01 14:28:43 (3324): Guest Log: -rw-------. 1 atlas atlas       424 Feb  1 05:30 setup.sh.local
2025-02-01 14:28:43 (3324): Guest Log: -rw-------. 1 atlas atlas    968472 Feb  1 05:31 agis_schedconf.cvmfs.json
2025-02-01 14:28:43 (3324): Guest Log: drwx------. 4 atlas atlas      4096 Feb  1 05:31 pilot3
2025-02-01 14:28:43 (3324): Guest Log: -rw-------. 1 atlas atlas        95 Feb  1 13:27 pilot_heartbeat.json
2025-02-01 14:28:43 (3324): Guest Log: -rw-------. 1 atlas atlas 308897928 Feb  1 13:27 HITS.43078907._001585.pool.root.1
2025-02-01 14:28:43 (3324): Guest Log: -rw-------. 1 atlas atlas      1030 Feb  1 13:28 memory_monitor_summary.json
2025-02-01 14:28:43 (3324): Guest Log: -rw-------. 1 atlas atlas   1580185 Feb  1 13:28 agis_ddmendpoints.agis.ALL.json
2025-02-01 14:28:43 (3324): Guest Log: -rw-------. 1 atlas atlas    473613 Feb  1 13:28 log.43078907._001585.job.log.tgz.1
2025-02-01 14:28:43 (3324): Guest Log: -rw-------. 1 atlas atlas      7749 Feb  1 13:28 heartbeat.json
2025-02-01 14:28:43 (3324): Guest Log: -rw-------. 1 atlas atlas      4470 Feb  1 13:28 pilotlog.txt
2025-02-01 14:28:43 (3324): Guest Log: -rw-------. 1 atlas atlas   2501102 Feb  1 13:28 log.43078907._001585.job.log.1
2025-02-01 14:28:43 (3324): Guest Log: -rw-------. 1 atlas atlas       357 Feb  1 13:28 output.list
2025-02-01 14:28:43 (3324): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb  1 13:28 runtime_log
2025-02-01 14:28:43 (3324): Guest Log: -rw-------. 1 atlas atlas   2990080 Feb  1 13:28 result.tar.gz
2025-02-01 14:28:43 (3324): Guest Log: -rw-r--r--. 1 atlas atlas     10993 Feb  1 13:28 runtime_log.err
2025-02-01 14:28:43 (3324): Guest Log: -rw-------. 1 atlas atlas       678 Feb  1 13:28 3aiKDmDsyw6n9Rq4apOajLDm4fhM0noT9bVoFjIUDmE0FKDmdhQHCn.diag
2025-02-01 14:28:43 (3324): Guest Log: Looking for outputfile HITS.43078907._001585.pool.root.1
2025-02-01 14:28:43 (3324): Guest Log: HITS file was successfully produced
2025-02-01 14:28:43 (3324): Guest Log: -rw-------. 1 atlas atlas 308897928 Feb  1 13:27 /home/atlas/RunAtlas/HITS.43078907._001585.pool.root.1
2025-02-01 14:28:45 (3324): Guest Log: Successfully finished the ATLAS job!
2025-02-01 14:28:45 (3324): Guest Log: Copying the results back to the shared directory!
2025-02-01 14:28:45 (3324): Guest Log:  *** Contents of shared directory: ***
2025-02-01 14:28:45 (3324): Guest Log: total 629720
2025-02-01 14:28:45 (3324): Guest Log: -rwxrwxrwx. 1 root root 332403727 Feb  1 05:29 ATLAS.root_0
2025-02-01 14:28:45 (3324): Guest Log: -rwxrwxrwx. 1 root root 308897928 Feb  1 13:28 HITS.pool.root.1
2025-02-01 14:28:45 (3324): Guest Log: -rwxrwxrwx. 1 root root      8863 Feb  1 05:29 init_data.xml
2025-02-01 14:28:45 (3324): Guest Log: -rwxrwxrwx. 1 root root    503474 Jan 28 12:29 input.tar.gz
2025-02-01 14:28:45 (3324): Guest Log: -rwxrwxrwx. 1 root root   2990080 Feb  1 13:28 result.tar.gz
2025-02-01 14:28:45 (3324): Guest Log: -rwxrwxrwx. 1 root root     17569 Jan 28 12:29 start_atlas.sh
2025-02-01 14:28:45 (3324): Guest Log:  *** Success! Shutting down the machine. ***
2025-02-01 14:28:45 (3324): VM Completion File Detected.
2025-02-01 14:28:45 (3324): Powering off VM.
2025-02-01 14:28:47 (3324): Successfully stopped VM.
2025-02-01 14:28:47 (3324): Deregistering VM. (boinc_9da9989358e9bd19, slot#0)
2025-02-01 14:28:47 (3324): Removing network bandwidth throttle group from VM.
2025-02-01 14:28:47 (3324): Removing VM from VirtualBox.
14:28:52 (3324): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN