Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-01-28 17:51:16 (2221509): Detected: vboxwrapper 26206
2025-01-28 17:51:16 (2221509): Detected: BOINC client v8.0.4
2025-01-28 17:51:16 (2221509): Detected: VirtualBox VboxManage Interface (Version: 7.1.4)
2025-01-28 17:51:16 (2221509): Successfully copied 'init_data.xml' to the shared directory.
2025-01-28 17:51:16 (2221509): Create VM. (boinc_d04df0915c5d3974, slot#0)
2025-01-28 17:51:17 (2221509): Setting Memory Size for VM. (4600MB)
2025-01-28 17:51:17 (2221509): Setting CPU Count for VM. (6)
2025-01-28 17:51:17 (2221509): Setting Chipset Options for VM.
2025-01-28 17:51:17 (2221509): Setting Graphics Controller Options for VM.
2025-01-28 17:51:17 (2221509): Setting Boot Options for VM.
2025-01-28 17:51:17 (2221509): Setting Network Configuration for NAT.
2025-01-28 17:51:18 (2221509): Enabling VM Network Access.
2025-01-28 17:51:18 (2221509): Disabling USB Support for VM.
2025-01-28 17:51:18 (2221509): Disabling COM Port Support for VM.
2025-01-28 17:51:18 (2221509): Disabling LPT Port Support for VM.
2025-01-28 17:51:18 (2221509): Disabling Audio Support for VM.
2025-01-28 17:51:18 (2221509): Disabling Clipboard Support for VM.
2025-01-28 17:51:19 (2221509): Disabling Drag and Drop Support for VM.
2025-01-28 17:51:19 (2221509): Adding storage controller(s) to VM.
2025-01-28 17:51:19 (2221509): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-01-28 17:51:21 (2221509): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-01-28 17:51:21 (2221509): forwarding host port 59367 to guest port 80
2025-01-28 17:51:21 (2221509): Enabling remote desktop for VM.
2025-01-28 17:51:21 (2221509): Required extension pack not installed, remote desktop not enabled.
2025-01-28 17:51:21 (2221509): Enabling shared directory for VM.
2025-01-28 17:51:21 (2221509): Starting VM using VBoxManage interface. (boinc_d04df0915c5d3974, slot#0)
2025-01-28 17:51:23 (2221509): Successfully started VM. (PID = '2221790')
2025-01-28 17:51:23 (2221509): Reporting VM Process ID to BOINC.
2025-01-28 17:51:23 (2221509): Guest Log: BIOS: VirtualBox 7.1.4
2025-01-28 17:51:23 (2221509): Guest Log: CPUID EDX: 0x178bfbff
2025-01-28 17:51:23 (2221509): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-01-28 17:51:23 (2221509): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-01-28 17:51:23 (2221509): VM state change detected. (old = 'poweredoff', new = 'running')
2025-01-28 17:51:23 (2221509): Detected: Web Application Enabled (http://localhost:59367)
2025-01-28 17:51:24 (2221509): VM state change detected. (old = 'running', new = 'paused')
2025-01-28 17:51:37 (2221509): Preference change detected
2025-01-28 17:51:37 (2221509): Setting CPU throttle for VM. (50%)
2025-01-28 17:51:38 (2221509): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-01-28 17:51:38 (2221509): VM state change detected. (old = 'paused', new = 'running')
2025-01-28 17:51:39 (2221509): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-01-28 17:51:39 (2221509): Guest Log: BIOS: Booting from Hard Disk...
2025-01-28 17:51:46 (2221509): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-01-28 17:51:46 (2221509): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-01-28 17:51:46 (2221509): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-01-28 17:51:46 (2221509): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-01-28 17:51:46 (2221509): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-01-28 17:51:46 (2221509): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-01-28 17:51:46 (2221509): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-01-28 17:51:46 (2221509): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-01-28 17:51:46 (2221509): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-01-28 17:51:46 (2221509): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-01-28 17:51:46 (2221509): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-01-28 17:51:46 (2221509): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-01-28 17:51:46 (2221509): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-01-28 17:51:46 (2221509): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-01-28 17:51:46 (2221509): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-01-28 17:51:46 (2221509): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-01-28 17:51:46 (2221509): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-01-28 17:51:46 (2221509): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-01-28 17:51:46 (2221509): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-01-28 17:51:46 (2221509): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-01-28 17:51:46 (2221509): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-01-28 17:51:46 (2221509): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-01-28 17:51:46 (2221509): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-01-28 17:51:46 (2221509): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-01-28 17:51:46 (2221509): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-01-28 17:51:46 (2221509): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-01-28 17:51:46 (2221509): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-01-28 17:51:46 (2221509): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-01-28 17:51:46 (2221509): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-01-28 17:51:46 (2221509): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-01-28 17:51:46 (2221509): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-01-28 17:51:46 (2221509): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-01-28 17:51:58 (2221509): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-01-28 17:51:58 (2221509): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-01-28 17:52:09 (2221509): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-01-28 17:52:09 (2221509): Guest Log: 00:00:00.000243 main     Log opened 2025-01-28T16:51:53.040672000Z
2025-01-28 17:52:09 (2221509): Guest Log: 00:00:00.000377 main     OS Product: Linux
2025-01-28 17:52:09 (2221509): Guest Log: 00:00:00.000420 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-01-28 17:52:09 (2221509): Guest Log: 00:00:00.000453 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-01-28 17:52:09 (2221509): Guest Log: 00:00:00.000487 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-01-28 17:52:09 (2221509): Guest Log: 00:00:00.000488 main     Process ID: 1338
2025-01-28 17:52:09 (2221509): Guest Log: 00:00:00.000489 main     Package type: LINUX_64BITS_GENERIC
2025-01-28 17:52:09 (2221509): Guest Log: 00:00:00.002697 main     5.2.32 r132073 started. Verbose level = 0
2025-01-28 17:52:10 (2221509): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-01-28 17:52:10 (2221509): Guest Log: [INFO] Mounting shared directory
2025-01-28 17:52:10 (2221509): Guest Log: [INFO] Checking for init_data.xml
2025-01-28 17:52:22 (2221509): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-01-28 17:52:22 (2221509): Guest Log: [INFO] Detected branch: prod
2025-01-28 17:52:22 (2221509): Guest Log: This is the prod version of the ATLAS job wrapper
2025-01-28 17:52:22 (2221509): Guest Log: Copying input files
2025-01-28 17:52:26 (2221509): Guest Log: Copied input files into RunAtlas.
2025-01-28 17:52:26 (2221509): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-01-28 17:52:26 (2221509): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-01-28 17:52:26 (2221509): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-01-28 17:52:26 (2221509): Guest Log: Further information can be found at the LHC@home message board.
2025-01-28 17:52:53 (2221509): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-01-28 17:52:54 (2221509): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-01-28 17:52:54 (2221509): Guest Log: 2.6.3.0 1633 0 30200 142059 4 1 3117296 4096000 0 65024 0 0 n/a 1 1 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
2025-01-28 17:53:02 (2221509): Guest Log: copied the webapp to /var/www
2025-01-28 17:53:02 (2221509): Guest Log: ATHENA_PROC_NUMBER=6
2025-01-28 17:53:02 (2221509): Guest Log: ATHENA_CORE_NUMBER=6
2025-01-28 17:53:03 (2221509): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-01-28 17:53:03 (2221509): Guest Log:  *** Starting ATLAS job. (PandaID=6493469790 taskID=43078931) ***
2025-01-28 19:30:38 (2221509): Status Report: Elapsed Time: '6000.000000'
2025-01-28 19:30:38 (2221509): Status Report: CPU Time: '14598.410000'
2025-01-28 21:09:39 (2221509): Status Report: Elapsed Time: '12000.000000'
2025-01-28 21:09:39 (2221509): Status Report: CPU Time: '33744.370000'
2025-01-28 22:48:39 (2221509): Status Report: Elapsed Time: '18000.000000'
2025-01-28 22:48:39 (2221509): Status Report: CPU Time: '52803.670000'
2025-01-29 00:27:40 (2221509): Status Report: Elapsed Time: '24000.000000'
2025-01-29 00:27:40 (2221509): Status Report: CPU Time: '71968.710000'
2025-01-29 02:04:14 (2221509): Guest Log:  *** Job finished ***
2025-01-29 02:04:14 (2221509): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-01-29 02:04:14 (2221509): Guest Log: 2025-01-29 01:03:56,299 | INFO     | [data] queue_monitor thread has finished
2025-01-29 02:04:14 (2221509): Guest Log: 2025-01-29 01:04:01,533 | INFO     | job.realtimelogging is not enabled
2025-01-29 02:04:14 (2221509): Guest Log: 2025-01-29 01:04:02,538 | INFO     | [payload] run_realtimelog thread has finished
2025-01-29 02:04:14 (2221509): Guest Log: 2025-01-29 01:04:04,681 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139956322387776)>', '<ExcThread(monitor, started 139955636516608)>']
2025-01-29 02:04:14 (2221509): Guest Log: 2025-01-29 01:04:05,299 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-01-29 02:04:14 (2221509): Guest Log: 2025-01-29 01:04:05,300 | INFO     | [monitor] control thread has ended
2025-01-29 02:04:14 (2221509): Guest Log: 2025-01-29 01:04:09,688 | INFO     | all workflow threads have been joined
2025-01-29 02:04:14 (2221509): Guest Log: 2025-01-29 01:04:09,688 | INFO     | end of generic workflow (traces error code: 0)
2025-01-29 02:04:14 (2221509): Guest Log: 2025-01-29 01:04:09,689 | INFO     | traces error code: 0
2025-01-29 02:04:14 (2221509): Guest Log: 2025-01-29 01:04:09,689 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-01-29 02:04:14 (2221509): Guest Log: 2025-01-29 01:04:10,340 [wrapper] ==== pilot stdout END ====
2025-01-29 02:04:14 (2221509): Guest Log: 2025-01-29 01:04:10,345 [wrapper] ==== wrapper stdout RESUME ====
2025-01-29 02:04:14 (2221509): Guest Log: 2025-01-29 01:04:10,349 [wrapper] pilotpid: 6015
2025-01-29 02:04:14 (2221509): Guest Log: 2025-01-29 01:04:10,355 [wrapper] Pilot exit status: 0
2025-01-29 02:04:14 (2221509): Guest Log: 2025-01-29 01:04:10,515 [wrapper] pandaids: 6493469790
2025-01-29 02:04:14 (2221509): Guest Log: 2025-01-29 01:04:10,660 [wrapper] cleanup supervisor_pilot 31829 6016
2025-01-29 02:04:14 (2221509): Guest Log: 2025-01-29 01:04:10,677 [wrapper] Test setup, not cleaning
2025-01-29 02:04:14 (2221509): Guest Log: 2025-01-29 01:04:10,712 [wrapper] apfmon messages muted
2025-01-29 02:04:14 (2221509): Guest Log: 2025-01-29 01:04:10,728 [wrapper] ==== wrapper stdout END ====
2025-01-29 02:04:14 (2221509): Guest Log: 2025-01-29 01:04:10,740 [wrapper] ==== wrapper stderr END ====
2025-01-29 02:04:14 (2221509): Guest Log:  *** Error codes and diagnostics ***
2025-01-29 02:04:14 (2221509): Guest Log:     "exeErrorCode": 0,
2025-01-29 02:04:14 (2221509): Guest Log:     "exeErrorDiag": "",
2025-01-29 02:04:14 (2221509): Guest Log:     "pilotErrorCode": 0,
2025-01-29 02:04:14 (2221509): Guest Log:     "pilotErrorDiag": "",
2025-01-29 02:04:14 (2221509): Guest Log:  *** Listing of results directory ***
2025-01-29 02:04:14 (2221509): Guest Log: total 338588
2025-01-29 02:04:14 (2221509): Guest Log: -rw-r--r--. 1 atlas atlas    491065 Jan 28 08:39 pilot3.tar.gz
2025-01-29 02:04:14 (2221509): Guest Log: -rwx------. 1 atlas atlas     34924 Jan 28 08:43 runpilot2-wrapper.sh
2025-01-29 02:04:14 (2221509): Guest Log: -rw-r--r--. 1 atlas atlas      5652 Jan 28 08:44 queuedata.json
2025-01-29 02:04:14 (2221509): Guest Log: -rw-r--r--. 1 atlas atlas     17569 Jan 28 16:52 start_atlas.sh
2025-01-29 02:04:14 (2221509): Guest Log: -rw-r--r--. 1 atlas atlas      6644 Jan 28 16:52 init_data.xml
2025-01-29 02:04:14 (2221509): Guest Log: -rw-r--r--. 1 atlas atlas    503539 Jan 28 16:52 input.tar.gz
2025-01-29 02:04:14 (2221509): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jan 28 16:52 EVNT.43078929._000026.pool.root.1 -> /data/./ATLAS.root_0
2025-01-29 02:04:14 (2221509): Guest Log: -rw-r--r--. 1 atlas atlas      2532 Jan 28 16:52 pandaJob.out
2025-01-29 02:04:14 (2221509): Guest Log: -rw-------. 1 atlas atlas       424 Jan 28 16:52 setup.sh.local
2025-01-29 02:04:14 (2221509): Guest Log: -rw-------. 1 atlas atlas    968272 Jan 28 16:54 agis_schedconf.cvmfs.json
2025-01-29 02:04:14 (2221509): Guest Log: drwx------. 4 atlas atlas      4096 Jan 28 16:54 pilot3
2025-01-29 02:04:14 (2221509): Guest Log: -rw-------. 1 atlas atlas 337859668 Jan 29 01:02 HITS.43078931._000586.pool.root.1
2025-01-29 02:04:14 (2221509): Guest Log: -rw-------. 1 atlas atlas        95 Jan 29 01:03 pilot_heartbeat.json
2025-01-29 02:04:14 (2221509): Guest Log: -rw-------. 1 atlas atlas      1035 Jan 29 01:03 memory_monitor_summary.json
2025-01-29 02:04:14 (2221509): Guest Log: -rw-------. 1 atlas atlas   1580206 Jan 29 01:03 agis_ddmendpoints.agis.ALL.json
2025-01-29 02:04:14 (2221509): Guest Log: -rw-------. 1 atlas atlas    448154 Jan 29 01:03 log.43078931._000586.job.log.tgz.1
2025-01-29 02:04:14 (2221509): Guest Log: -rw-------. 1 atlas atlas      7715 Jan 29 01:03 heartbeat.json
2025-01-29 02:04:14 (2221509): Guest Log: -rw-------. 1 atlas atlas      4347 Jan 29 01:04 pilotlog.txt
2025-01-29 02:04:14 (2221509): Guest Log: -rw-------. 1 atlas atlas   2119421 Jan 29 01:04 log.43078931._000586.job.log.1
2025-01-29 02:04:14 (2221509): Guest Log: -rw-------. 1 atlas atlas       357 Jan 29 01:04 output.list
2025-01-29 02:04:14 (2221509): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jan 29 01:04 runtime_log
2025-01-29 02:04:14 (2221509): Guest Log: -rw-------. 1 atlas atlas   2590720 Jan 29 01:04 result.tar.gz
2025-01-29 02:04:14 (2221509): Guest Log: -rw-------. 1 atlas atlas       691 Jan 29 01:04 udvKDmRNww6n9Rq4apOajLDm4fhM0noT9bVoFjIUDmCVFKDmMh4t4n.diag
2025-01-29 02:04:14 (2221509): Guest Log: -rw-r--r--. 1 atlas atlas     11028 Jan 29 01:04 runtime_log.err
2025-01-29 02:04:14 (2221509): Guest Log: Looking for outputfile HITS.43078931._000586.pool.root.1
2025-01-29 02:04:14 (2221509): Guest Log: HITS file was successfully produced
2025-01-29 02:04:14 (2221509): Guest Log: -rw-------. 1 atlas atlas 337859668 Jan 29 01:02 /home/atlas/RunAtlas/HITS.43078931._000586.pool.root.1
2025-01-29 02:04:14 (2221509): Guest Log: Successfully finished the ATLAS job!
2025-01-29 02:04:14 (2221509): Guest Log: Copying the results back to the shared directory!
2025-01-29 02:04:14 (2221509): Guest Log:  *** Contents of shared directory: ***
2025-01-29 02:04:14 (2221509): Guest Log: total 344040
2025-01-29 02:04:14 (2221509): Guest Log: -rw-r--r--. 1 root root 349171087 Jan 28 16:51 ATLAS.root_0
2025-01-29 02:04:14 (2221509): Guest Log: -rw-r--r--. 1 root root      6644 Jan 28 16:51 init_data.xml
2025-01-29 02:04:14 (2221509): Guest Log: -rw-r--r--. 1 root root    503539 Jan 28 16:51 input.tar.gz
2025-01-29 02:04:14 (2221509): Guest Log: -rw-r--r--. 1 root root   2590720 Jan 29  2025 result.tar.gz
2025-01-29 02:04:14 (2221509): Guest Log: -rw-r--r--. 1 root root     17569 Jan 28 16:51 start_atlas.sh
2025-01-29 02:04:14 (2221509): Guest Log:  *** Success! Shutting down the machine. ***
2025-01-29 02:04:14 (2221509): VM Completion File Detected.
2025-01-29 02:04:14 (2221509): Powering off VM.
2025-01-29 02:04:15 (2221509): Successfully stopped VM.
2025-01-29 02:04:15 (2221509): Deregistering VM. (boinc_d04df0915c5d3974, slot#0)
2025-01-29 02:04:15 (2221509): Removing network bandwidth throttle group from VM.
2025-01-29 02:04:15 (2221509): Removing VM from VirtualBox.
02:04:20 (2221509): called boinc_finish(0)

</stderr_txt>
]]>

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