Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-01-28 01:59:17 (3088): Detected: vboxwrapper 26206
2025-01-28 01:59:17 (3088): Detected: BOINC client v8.0.2
2025-01-28 01:59:18 (3088): Detected: VirtualBox VboxManage Interface (Version: 7.0.18)
2025-01-28 01:59:19 (3088): Successfully copied 'init_data.xml' to the shared directory.
2025-01-28 01:59:19 (3088): Create VM. (boinc_287d7d9c66ffc0e0, slot#65)
2025-01-28 01:59:20 (3088): Setting Memory Size for VM. (4600MB)
2025-01-28 01:59:20 (3088): Setting CPU Count for VM. (6)
2025-01-28 01:59:20 (3088): Setting Chipset Options for VM.
2025-01-28 01:59:20 (3088): Setting Graphics Controller Options for VM.
2025-01-28 01:59:21 (3088): Setting Boot Options for VM.
2025-01-28 01:59:21 (3088): Setting Network Configuration for NAT.
2025-01-28 01:59:21 (3088): Enabling VM Network Access.
2025-01-28 01:59:21 (3088): Disabling USB Support for VM.
2025-01-28 01:59:22 (3088): Disabling COM Port Support for VM.
2025-01-28 01:59:22 (3088): Disabling LPT Port Support for VM.
2025-01-28 01:59:22 (3088): Disabling Audio Support for VM.
2025-01-28 01:59:22 (3088): Disabling Clipboard Support for VM.
2025-01-28 01:59:23 (3088): Disabling Drag and Drop Support for VM.
2025-01-28 01:59:23 (3088): Adding storage controller(s) to VM.
2025-01-28 01:59:23 (3088): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-01-28 01:59:26 (3088): Adding VirtualBox Guest Additions to VM.
2025-01-28 01:59:26 (3088): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-01-28 01:59:27 (3088): forwarding host port 59431 to guest port 80
2025-01-28 01:59:27 (3088): Enabling remote desktop for VM.
2025-01-28 01:59:27 (3088): Enabling shared directory for VM.
2025-01-28 01:59:28 (3088): Starting VM using VBoxManage interface. (boinc_287d7d9c66ffc0e0, slot#65)
2025-01-28 01:59:40 (3088): Successfully started VM. (PID = '26572')
2025-01-28 01:59:40 (3088): Reporting VM Process ID to BOINC.
2025-01-28 01:59:40 (3088): Guest Log: BIOS: VirtualBox 7.0.18
2025-01-28 01:59:40 (3088): Guest Log: CPUID EDX: 0x178bfbff
2025-01-28 01:59:40 (3088): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-01-28 01:59:40 (3088): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-01-28 01:59:40 (3088): VM state change detected. (old = 'poweredoff', new = 'running')
2025-01-28 01:59:40 (3088): Detected: Web Application Enabled (http://localhost:59431)
2025-01-28 01:59:40 (3088): Detected: Remote Desktop Enabled (localhost:59433)
2025-01-28 01:59:40 (3088): Preference change detected
2025-01-28 01:59:40 (3088): Setting CPU throttle for VM. (100%)
2025-01-28 01:59:40 (3088): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 120 seconds) or (Vbox_job.xml: 900 seconds))
2025-01-28 01:59:42 (3088): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-01-28 01:59:42 (3088): Guest Log: BIOS: Booting from Hard Disk...
2025-01-28 01:59:46 (3088): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-01-28 01:59:46 (3088): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-01-28 01:59:46 (3088): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-01-28 01:59:46 (3088): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-01-28 01:59:46 (3088): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-01-28 01:59:46 (3088): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-01-28 01:59:46 (3088): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-01-28 01:59:46 (3088): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-01-28 01:59:46 (3088): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-01-28 01:59:46 (3088): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-01-28 01:59:46 (3088): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-01-28 01:59:46 (3088): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-01-28 01:59:46 (3088): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-01-28 01:59:46 (3088): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-01-28 01:59:46 (3088): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-01-28 01:59:46 (3088): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-01-28 01:59:46 (3088): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-01-28 01:59:46 (3088): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-01-28 01:59:46 (3088): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-01-28 01:59:46 (3088): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-01-28 01:59:46 (3088): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-01-28 01:59:46 (3088): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-01-28 01:59:46 (3088): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-01-28 01:59:46 (3088): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-01-28 01:59:46 (3088): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-01-28 01:59:46 (3088): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-01-28 01:59:46 (3088): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-01-28 01:59:46 (3088): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-01-28 01:59:46 (3088): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-01-28 01:59:46 (3088): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-01-28 01:59:46 (3088): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-01-28 01:59:46 (3088): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-01-28 01:59:56 (3088): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-01-28 01:59:56 (3088): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-01-28 02:00:13 (3088): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-01-28 02:00:13 (3088): Guest Log: 00:00:00.000445 main     Log opened 2025-01-28T02:00:12.030617000Z
2025-01-28 02:00:13 (3088): Guest Log: 00:00:00.000656 main     OS Product: Linux
2025-01-28 02:00:13 (3088): Guest Log: 00:00:00.000727 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-01-28 02:00:13 (3088): Guest Log: 00:00:00.000828 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-01-28 02:00:13 (3088): Guest Log: 00:00:00.000892 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-01-28 02:00:13 (3088): Guest Log: 00:00:00.000895 main     Process ID: 1352
2025-01-28 02:00:13 (3088): Guest Log: 00:00:00.000897 main     Package type: LINUX_64BITS_GENERIC
2025-01-28 02:00:13 (3088): Guest Log: 00:00:00.003118 main     5.2.32 r132073 started. Verbose level = 0
2025-01-28 02:00:14 (3088): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-01-28 02:00:14 (3088): Guest Log: [INFO] Mounting shared directory
2025-01-28 02:00:14 (3088): Guest Log: [INFO] Checking for init_data.xml
2025-01-28 02:00:20 (3088): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-01-28 02:00:20 (3088): Guest Log: [INFO] Detected branch: prod
2025-01-28 02:00:21 (3088): Guest Log: This is the prod version of the ATLAS job wrapper
2025-01-28 02:00:21 (3088): Guest Log: Copying input files
2025-01-28 02:00:23 (3088): Guest Log: 00:00:10.008263 timesync vgsvcTimeSyncWorker: Radical guest time change: 28 811 558 582 000ns (GuestNow=1 738 058 423 596 459 000 ns GuestLast=1 738 029 612 037 877 000 ns fSetTimeLastLoop=true )
2025-01-28 02:00:26 (3088): Guest Log: Copied input files into RunAtlas.
2025-01-28 02:00:26 (3088): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-01-28 02:00:26 (3088): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-01-28 02:00:26 (3088): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-01-28 02:00:26 (3088): Guest Log: Further information can be found at the LHC@home message board.
2025-01-28 02:00:38 (3088): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-01-28 02:00:39 (3088): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-01-28 02:00:39 (3088): Guest Log: 2.6.3.0 1634 0 30148 142050 4 1 3117296 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-01-28 02:00:40 (3088): Guest Log: copied the webapp to /var/www
2025-01-28 02:00:40 (3088): Guest Log: ATHENA_PROC_NUMBER=6
2025-01-28 02:00:40 (3088): Guest Log: ATHENA_CORE_NUMBER=6
2025-01-28 02:00:41 (3088): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-01-28 02:00:41 (3088): Guest Log:  *** Starting ATLAS job. (PandaID=6493469625 taskID=43078931) ***
2025-01-28 03:39:48 (3088): Status Report: Elapsed Time: '6000.000000'
2025-01-28 03:39:48 (3088): Status Report: CPU Time: '19614.703125'
2025-01-28 05:19:57 (3088): Status Report: Elapsed Time: '12000.247551'
2025-01-28 05:19:57 (3088): Status Report: CPU Time: '55238.531250'
2025-01-28 07:00:00 (3088): Status Report: Elapsed Time: '18000.247551'
2025-01-28 07:00:00 (3088): Status Report: CPU Time: '90955.687500'
2025-01-28 08:44:23 (3088): Status Report: Elapsed Time: '24001.228329'
2025-01-28 08:44:23 (3088): Status Report: CPU Time: '128292.750000'
2025-01-28 11:00:53 (3088): Status Report: Elapsed Time: '30001.633244'
2025-01-28 11:00:53 (3088): Status Report: CPU Time: '177366.078125'
2025-01-28 13:05:04 (3088): Status Report: Elapsed Time: '36001.902214'
2025-01-28 13:05:04 (3088): Status Report: CPU Time: '222031.328125'
2025-01-28 14:00:07 (3088): Guest Log:  *** Job finished ***
2025-01-28 14:00:07 (3088): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-01-28 14:00:07 (3088): Guest Log: 2025-01-28 21:59:52,373 | INFO     | waiting for thread to finish: ['<_MainThread(MainThread, started 139747916064576)>', '<ExcThread(queue_monitor, started 139747347388160)>']
2025-01-28 14:00:07 (3088): Guest Log: 2025-01-28 21:59:54,375 | INFO     | waiting for thread to finish: ['<_MainThread(MainThread, started 139747916064576)>', '<ExcThread(queue_monitor, started 139747347388160)>']
2025-01-28 14:00:07 (3088): Guest Log: 2025-01-28 21:59:56,378 | INFO     | waiting for thread to finish: ['<_MainThread(MainThread, started 139747916064576)>', '<ExcThread(queue_monitor, started 139747347388160)>']
2025-01-28 14:00:07 (3088): Guest Log: 2025-01-28 21:59:56,732 | INFO     | waiting for thread to finish: ['<_MainThread(MainThread, started 139747916064576)>', '<ExcThread(queue_monitor, started 139747347388160)>']
2025-01-28 14:00:07 (3088): Guest Log: 2025-01-28 21:59:56,733 | INFO     | [job] queue monitor thread has finished
2025-01-28 14:00:07 (3088): Guest Log: 2025-01-28 21:59:58,406 | INFO     | caller=run is remaining thread - safe to abort (names=['<_MainThread(MainThread, started 139747916064576)>'])
2025-01-28 14:00:07 (3088): Guest Log: 2025-01-28 22:00:03,412 | INFO     | all workflow threads have been joined
2025-01-28 14:00:07 (3088): Guest Log: 2025-01-28 22:00:03,413 | INFO     | end of generic workflow (traces error code: 0)
2025-01-28 14:00:07 (3088): Guest Log: 2025-01-28 22:00:03,413 | INFO     | traces error code: 0
2025-01-28 14:00:07 (3088): Guest Log: 2025-01-28 22:00:03,414 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-01-28 14:00:07 (3088): Guest Log: 2025-01-28 22:00:03,715 [wrapper] ==== pilot stdout END ====
2025-01-28 14:00:07 (3088): Guest Log: 2025-01-28 22:00:03,731 [wrapper] ==== wrapper stdout RESUME ====
2025-01-28 14:00:07 (3088): Guest Log: 2025-01-28 22:00:03,747 [wrapper] pilotpid: 6027
2025-01-28 14:00:07 (3088): Guest Log: 2025-01-28 22:00:03,761 [wrapper] Pilot exit status: 0
2025-01-28 14:00:07 (3088): Guest Log: 2025-01-28 22:00:04,166 [wrapper] pandaids: 6493469625
2025-01-28 14:00:07 (3088): Guest Log: 2025-01-28 22:00:04,268 [wrapper] cleanup supervisor_pilot 28358 6028
2025-01-28 14:00:07 (3088): Guest Log: 2025-01-28 22:00:04,283 [wrapper] Test setup, not cleaning
2025-01-28 14:00:07 (3088): Guest Log: 2025-01-28 22:00:04,312 [wrapper] apfmon messages muted
2025-01-28 14:00:07 (3088): Guest Log: 2025-01-28 22:00:04,325 [wrapper] ==== wrapper stdout END ====
2025-01-28 14:00:07 (3088): Guest Log: 2025-01-28 22:00:04,340 [wrapper] ==== wrapper stderr END ====
2025-01-28 14:00:07 (3088): Guest Log:  *** Error codes and diagnostics ***
2025-01-28 14:00:07 (3088): Guest Log:  *** Listing of results directory ***
2025-01-28 14:00:07 (3088): Guest Log: total 16380
2025-01-28 14:00:07 (3088): Guest Log: -rw-r--r--. 1 atlas atlas  491065 Jan 28 08:39 pilot3.tar.gz
2025-01-28 14:00:07 (3088): Guest Log: -rwx------. 1 atlas atlas   34924 Jan 28 08:43 runpilot2-wrapper.sh
2025-01-28 14:00:07 (3088): Guest Log: -rw-r--r--. 1 atlas atlas    5652 Jan 28 08:43 queuedata.json
2025-01-28 14:00:07 (3088): Guest Log: -rwxr-xr-x. 1 atlas atlas    9258 Jan 28 10:00 init_data.xml
2025-01-28 14:00:07 (3088): Guest Log: -rwxr-xr-x. 1 atlas atlas  503539 Jan 28 10:00 input.tar.gz
2025-01-28 14:00:07 (3088): Guest Log: -rwxr-xr-x. 1 atlas atlas   17569 Jan 28 10:00 start_atlas.sh
2025-01-28 14:00:07 (3088): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Jan 28 10:00 EVNT.43078929._000019.pool.root.1 -> /data/./ATLAS.root_0
2025-01-28 14:00:07 (3088): Guest Log: -rw-r--r--. 1 atlas atlas    2532 Jan 28 10:00 pandaJob.out
2025-01-28 14:00:07 (3088): Guest Log: -rw-------. 1 atlas atlas     424 Jan 28 10:00 setup.sh.local
2025-01-28 14:00:07 (3088): Guest Log: -rw-------. 1 atlas atlas  968638 Jan 28 10:02 agis_schedconf.cvmfs.json
2025-01-28 14:00:07 (3088): Guest Log: -rw-------. 1 atlas atlas 1580206 Jan 28 10:02 agis_ddmendpoints.agis.ALL.json
2025-01-28 14:00:07 (3088): Guest Log: drwx------. 4 atlas atlas    4096 Jan 28 10:02 pilot3
2025-01-28 14:00:07 (3088): Guest Log: -rw-------. 1 atlas atlas     926 Jan 28 21:32 heartbeat.json
2025-01-28 14:00:07 (3088): Guest Log: -rw-------. 1 atlas atlas      95 Jan 28 21:58 pilot_heartbeat.json
2025-01-28 14:00:07 (3088): Guest Log: drwxrwx---. 2 atlas atlas    4096 Jan 28 21:59 PanDA_Pilot-6493469625
2025-01-28 14:00:07 (3088): Guest Log: -rw-------. 1 atlas atlas    1031 Jan 28 21:59 memory_monitor_summary.json
2025-01-28 14:00:07 (3088): Guest Log: -rw-------. 1 atlas atlas 4348714 Jan 28 22:00 pilotlog.txt
2025-01-28 14:00:07 (3088): Guest Log: -rw-------. 1 atlas atlas 4365162 Jan 28 22:00 log.43078931._000421.job.log.1
2025-01-28 14:00:07 (3088): Guest Log: -rw-r--r--. 1 atlas atlas     571 Jan 28 22:00 runtime_log
2025-01-28 14:00:07 (3088): Guest Log: -rw-------. 1 atlas atlas 4372480 Jan 28 22:00 result.tar.gz
2025-01-28 14:00:07 (3088): Guest Log: -rw-r--r--. 1 atlas atlas   10269 Jan 28 22:00 runtime_log.err
2025-01-28 14:00:07 (3088): Guest Log: -rw-------. 1 atlas atlas     650 Jan 28 22:00 Qy0MDmoMww6n9Rq4apOajLDm4fhM0noT9bVoFjIUDmgTFKDmIgM3Om.diag
2025-01-28 14:00:07 (3088): Guest Log: Looking for outputfile HITS.43078931._000421.pool.root.1
2025-01-28 14:00:07 (3088): Guest Log: No HITS file was produced
2025-01-28 14:00:07 (3088): Guest Log: Successfully finished the ATLAS job!
2025-01-28 14:00:07 (3088): Guest Log: Copying the results back to the shared directory!
2025-01-28 14:00:07 (3088): Guest Log:  *** Contents of shared directory: ***
2025-01-28 14:00:08 (3088): Guest Log: total 342720
2025-01-28 14:00:08 (3088): Guest Log: -rwxrwxrwx. 1 root root 346031506 Jan 28 09:59 ATLAS.root_0
2025-01-28 14:00:08 (3088): Guest Log: -rwxrwxrwx. 1 root root      9258 Jan 28 09:59 init_data.xml
2025-01-28 14:00:08 (3088): Guest Log: -rwxrwxrwx. 1 root root    503539 Jan 28 09:25 input.tar.gz
2025-01-28 14:00:08 (3088): Guest Log: -rwxrwxrwx. 1 root root   4372480 Jan 28 22:00 result.tar.gz
2025-01-28 14:00:08 (3088): Guest Log: -rwxrwxrwx. 1 root root     17569 Jan 28 09:25 start_atlas.sh
2025-01-28 14:00:08 (3088): Guest Log:  *** Success! Shutting down the machine. ***
2025-01-28 14:00:08 (3088): VM Completion File Detected.
2025-01-28 14:00:08 (3088): Powering off VM.
2025-01-28 14:00:10 (3088): Successfully stopped VM.
2025-01-28 14:00:10 (3088): Deregistering VM. (boinc_287d7d9c66ffc0e0, slot#65)
2025-01-28 14:00:10 (3088): Removing network bandwidth throttle group from VM.
2025-01-28 14:00:11 (3088): Removing VM from VirtualBox.
14:00:16 (3088): called boinc_finish(0)

</stderr_txt>
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