Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-01-28 10:25:36 (2221435): Detected: vboxwrapper 26206
2025-01-28 10:25:36 (2221435): Detected: BOINC client v8.0.4
2025-01-28 10:25:36 (2221435): Detected: VirtualBox VboxManage Interface (Version: 7.1.4)
2025-01-28 10:25:36 (2221435): Successfully copied 'init_data.xml' to the shared directory.
2025-01-28 10:25:36 (2221435): Create VM. (boinc_b4298e36a626e3c1, slot#0)
2025-01-28 10:25:36 (2221435): Setting Memory Size for VM. (4600MB)
2025-01-28 10:25:36 (2221435): Setting CPU Count for VM. (6)
2025-01-28 10:25:36 (2221435): Setting Chipset Options for VM.
2025-01-28 10:25:36 (2221435): Setting Graphics Controller Options for VM.
2025-01-28 10:25:36 (2221435): Setting Boot Options for VM.
2025-01-28 10:25:36 (2221435): Setting Network Configuration for NAT.
2025-01-28 10:25:36 (2221435): Enabling VM Network Access.
2025-01-28 10:25:36 (2221435): Disabling USB Support for VM.
2025-01-28 10:25:36 (2221435): Disabling COM Port Support for VM.
2025-01-28 10:25:36 (2221435): Disabling LPT Port Support for VM.
2025-01-28 10:25:36 (2221435): Disabling Audio Support for VM.
2025-01-28 10:25:36 (2221435): Disabling Clipboard Support for VM.
2025-01-28 10:25:36 (2221435): Disabling Drag and Drop Support for VM.
2025-01-28 10:25:36 (2221435): Adding storage controller(s) to VM.
2025-01-28 10:25:36 (2221435): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-01-28 10:25:38 (2221435): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-01-28 10:25:38 (2221435): forwarding host port 52155 to guest port 80
2025-01-28 10:25:38 (2221435): Enabling remote desktop for VM.
2025-01-28 10:25:38 (2221435): Required extension pack not installed, remote desktop not enabled.
2025-01-28 10:25:38 (2221435): Enabling shared directory for VM.
2025-01-28 10:25:38 (2221435): Starting VM using VBoxManage interface. (boinc_b4298e36a626e3c1, slot#0)
2025-01-28 10:25:39 (2221435): Successfully started VM. (PID = '2221691')
2025-01-28 10:25:39 (2221435): Reporting VM Process ID to BOINC.
2025-01-28 10:25:39 (2221435): Guest Log: BIOS: VirtualBox 7.1.4
2025-01-28 10:25:39 (2221435): Guest Log: CPUID EDX: 0x178bfbff
2025-01-28 10:25:39 (2221435): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-01-28 10:25:39 (2221435): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-01-28 10:25:39 (2221435): VM state change detected. (old = 'poweredoff', new = 'running')
2025-01-28 10:25:39 (2221435): Detected: Web Application Enabled (http://localhost:52155)
2025-01-28 10:25:39 (2221435): Preference change detected
2025-01-28 10:25:39 (2221435): Setting CPU throttle for VM. (50%)
2025-01-28 10:25:39 (2221435): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-01-28 10:25:41 (2221435): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-01-28 10:25:41 (2221435): Guest Log: BIOS: Booting from Hard Disk...
2025-01-28 10:25:44 (2221435): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-01-28 10:25:44 (2221435): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-01-28 10:25:44 (2221435): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-01-28 10:25:44 (2221435): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-01-28 10:25:44 (2221435): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-01-28 10:25:44 (2221435): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-01-28 10:25:44 (2221435): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-01-28 10:25:44 (2221435): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-01-28 10:25:44 (2221435): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-01-28 10:25:44 (2221435): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-01-28 10:25:44 (2221435): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-01-28 10:25:44 (2221435): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-01-28 10:25:44 (2221435): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-01-28 10:25:44 (2221435): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-01-28 10:25:44 (2221435): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-01-28 10:25:44 (2221435): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-01-28 10:25:44 (2221435): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-01-28 10:25:44 (2221435): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-01-28 10:25:44 (2221435): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-01-28 10:25:44 (2221435): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-01-28 10:25:44 (2221435): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-01-28 10:25:44 (2221435): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-01-28 10:25:44 (2221435): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-01-28 10:25:44 (2221435): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-01-28 10:25:44 (2221435): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-01-28 10:25:44 (2221435): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-01-28 10:25:44 (2221435): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-01-28 10:25:44 (2221435): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-01-28 10:25:44 (2221435): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-01-28 10:25:44 (2221435): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-01-28 10:25:44 (2221435): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-01-28 10:25:44 (2221435): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-01-28 10:25:51 (2221435): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-01-28 10:25:51 (2221435): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-01-28 10:25:57 (2221435): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-01-28 10:25:57 (2221435): Guest Log: 00:00:00.000119 main     Log opened 2025-01-28T09:25:55.032530000Z
2025-01-28 10:25:57 (2221435): Guest Log: 00:00:00.000216 main     OS Product: Linux
2025-01-28 10:25:57 (2221435): Guest Log: 00:00:00.000241 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-01-28 10:25:57 (2221435): Guest Log: 00:00:00.000258 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-01-28 10:25:57 (2221435): Guest Log: 00:00:00.000282 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-01-28 10:25:57 (2221435): Guest Log: 00:00:00.000282 main     Process ID: 1330
2025-01-28 10:25:57 (2221435): Guest Log: 00:00:00.000283 main     Package type: LINUX_64BITS_GENERIC
2025-01-28 10:25:57 (2221435): Guest Log: 00:00:00.000677 main     5.2.32 r132073 started. Verbose level = 0
2025-01-28 10:25:57 (2221435): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-01-28 10:25:57 (2221435): Guest Log: [INFO] Mounting shared directory
2025-01-28 10:25:57 (2221435): Guest Log: [INFO] Checking for init_data.xml
2025-01-28 10:26:21 (2221435): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-01-28 10:26:21 (2221435): Guest Log: [INFO] Detected branch: prod
2025-01-28 10:26:21 (2221435): Guest Log: This is the prod version of the ATLAS job wrapper
2025-01-28 10:26:21 (2221435): Guest Log: Copying input files
2025-01-28 10:26:22 (2221435): Guest Log: Copied input files into RunAtlas.
2025-01-28 10:26:22 (2221435): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-01-28 10:26:22 (2221435): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-01-28 10:26:22 (2221435): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-01-28 10:26:22 (2221435): Guest Log: Further information can be found at the LHC@home message board.
2025-01-28 10:26:43 (2221435): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-01-28 10:26:43 (2221435): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-01-28 10:26:43 (2221435): Guest Log: 2.6.3.0 1631 0 30244 142050 4 1 3117296 4096000 0 65024 0 0 n/a 1 1 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
2025-01-28 10:26:44 (2221435): Guest Log: copied the webapp to /var/www
2025-01-28 10:26:44 (2221435): Guest Log: ATHENA_PROC_NUMBER=6
2025-01-28 10:26:44 (2221435): Guest Log: ATHENA_CORE_NUMBER=6
2025-01-28 10:26:44 (2221435): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-01-28 10:26:44 (2221435): Guest Log:  *** Starting ATLAS job. (PandaID=6493469427 taskID=43078931) ***
2025-01-28 12:04:39 (2221435): Status Report: Elapsed Time: '6000.000000'
2025-01-28 12:04:39 (2221435): Status Report: CPU Time: '13682.440000'
2025-01-28 13:43:40 (2221435): Status Report: Elapsed Time: '12000.000000'
2025-01-28 13:43:40 (2221435): Status Report: CPU Time: '30690.150000'
2025-01-28 15:07:32 (2221435): Guest Log:  *** Job finished ***
2025-01-28 15:07:32 (2221435): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-01-28 15:07:32 (2221435): Guest Log: 2025-01-28 14:07:22,436 | INFO     | [data] control thread has finished
2025-01-28 15:07:32 (2221435): Guest Log: 2025-01-28 14:07:23,682 | INFO     | [data] copytool_out thread has finished
2025-01-28 15:07:32 (2221435): Guest Log: 2025-01-28 14:07:26,079 | INFO     | [data] queue_monitor thread has finished
2025-01-28 15:07:32 (2221435): Guest Log: 2025-01-28 14:07:26,808 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140350343440192)>', '<ExcThread(monitor, started 140349917878016)>']
2025-01-28 15:07:32 (2221435): Guest Log: 2025-01-28 14:07:27,739 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-01-28 15:07:32 (2221435): Guest Log: 2025-01-28 14:07:27,740 | INFO     | [monitor] control thread has ended
2025-01-28 15:07:32 (2221435): Guest Log: 2025-01-28 14:07:31,864 | INFO     | all workflow threads have been joined
2025-01-28 15:07:32 (2221435): Guest Log: 2025-01-28 14:07:31,864 | INFO     | end of generic workflow (traces error code: 0)
2025-01-28 15:07:32 (2221435): Guest Log: 2025-01-28 14:07:31,864 | INFO     | traces error code: 0
2025-01-28 15:07:32 (2221435): Guest Log: 2025-01-28 14:07:31,864 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-01-28 15:07:32 (2221435): Guest Log: 2025-01-28 14:07:31,915 [wrapper] ==== pilot stdout END ====
2025-01-28 15:07:32 (2221435): Guest Log: 2025-01-28 14:07:31,918 [wrapper] ==== wrapper stdout RESUME ====
2025-01-28 15:07:32 (2221435): Guest Log: 2025-01-28 14:07:31,920 [wrapper] pilotpid: 6014
2025-01-28 15:07:32 (2221435): Guest Log: 2025-01-28 14:07:31,922 [wrapper] Pilot exit status: 0
2025-01-28 15:07:32 (2221435): Guest Log: 2025-01-28 14:07:32,002 [wrapper] pandaids: 6493469427
2025-01-28 15:07:32 (2221435): Guest Log: 2025-01-28 14:07:32,017 [wrapper] cleanup supervisor_pilot 15988 6015
2025-01-28 15:07:32 (2221435): Guest Log: 2025-01-28 14:07:32,019 [wrapper] Test setup, not cleaning
2025-01-28 15:07:32 (2221435): Guest Log: 2025-01-28 14:07:32,024 [wrapper] apfmon messages muted
2025-01-28 15:07:32 (2221435): Guest Log: 2025-01-28 14:07:32,026 [wrapper] ==== wrapper stdout END ====
2025-01-28 15:07:32 (2221435): Guest Log: 2025-01-28 14:07:32,029 [wrapper] ==== wrapper stderr END ====
2025-01-28 15:07:32 (2221435): Guest Log:  *** Error codes and diagnostics ***
2025-01-28 15:07:32 (2221435): Guest Log:     "exeErrorCode": 0,
2025-01-28 15:07:32 (2221435): Guest Log:     "exeErrorDiag": "",
2025-01-28 15:07:32 (2221435): Guest Log:     "pilotErrorCode": 0,
2025-01-28 15:07:32 (2221435): Guest Log:     "pilotErrorDiag": "",
2025-01-28 15:07:32 (2221435): Guest Log:  *** Listing of results directory ***
2025-01-28 15:07:32 (2221435): Guest Log: total 345844
2025-01-28 15:07:32 (2221435): Guest Log: -rw-r--r--. 1 atlas atlas    491065 Jan 28 08:39 pilot3.tar.gz
2025-01-28 15:07:32 (2221435): Guest Log: -rwx------. 1 atlas atlas     34924 Jan 28 08:43 runpilot2-wrapper.sh
2025-01-28 15:07:32 (2221435): Guest Log: -rw-r--r--. 1 atlas atlas      5652 Jan 28 08:43 queuedata.json
2025-01-28 15:07:32 (2221435): Guest Log: -rw-r--r--. 1 atlas atlas     17569 Jan 28 09:26 start_atlas.sh
2025-01-28 15:07:32 (2221435): Guest Log: -rw-r--r--. 1 atlas atlas    503536 Jan 28 09:26 input.tar.gz
2025-01-28 15:07:32 (2221435): Guest Log: -rw-r--r--. 1 atlas atlas      6890 Jan 28 09:26 init_data.xml
2025-01-28 15:07:32 (2221435): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jan 28 09:26 EVNT.43078929._000012.pool.root.1 -> /data/./ATLAS.root_0
2025-01-28 15:07:32 (2221435): Guest Log: -rw-r--r--. 1 atlas atlas      2531 Jan 28 09:26 pandaJob.out
2025-01-28 15:07:32 (2221435): Guest Log: -rw-------. 1 atlas atlas       424 Jan 28 09:26 setup.sh.local
2025-01-28 15:07:32 (2221435): Guest Log: -rw-------. 1 atlas atlas    968638 Jan 28 09:28 agis_schedconf.cvmfs.json
2025-01-28 15:07:32 (2221435): Guest Log: drwx------. 4 atlas atlas      4096 Jan 28 09:28 pilot3
2025-01-28 15:07:32 (2221435): Guest Log: -rw-------. 1 atlas atlas 347503783 Jan 28 14:05 HITS.43078931._000248.pool.root.1
2025-01-28 15:07:32 (2221435): Guest Log: -rw-------. 1 atlas atlas        95 Jan 28 14:06 pilot_heartbeat.json
2025-01-28 15:07:32 (2221435): Guest Log: -rw-------. 1 atlas atlas      1030 Jan 28 14:06 memory_monitor_summary.json
2025-01-28 15:07:32 (2221435): Guest Log: -rw-------. 1 atlas atlas   1580206 Jan 28 14:06 agis_ddmendpoints.agis.ALL.json
2025-01-28 15:07:32 (2221435): Guest Log: -rw-------. 1 atlas atlas    364414 Jan 28 14:06 log.43078931._000248.job.log.tgz.1
2025-01-28 15:07:32 (2221435): Guest Log: -rw-------. 1 atlas atlas      7698 Jan 28 14:07 heartbeat.json
2025-01-28 15:07:32 (2221435): Guest Log: -rw-------. 1 atlas atlas      4398 Jan 28 14:07 pilotlog.txt
2025-01-28 15:07:32 (2221435): Guest Log: -rw-------. 1 atlas atlas   1097797 Jan 28 14:07 log.43078931._000248.job.log.1
2025-01-28 15:07:32 (2221435): Guest Log: -rw-------. 1 atlas atlas       357 Jan 28 14:07 output.list
2025-01-28 15:07:32 (2221435): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jan 28 14:07 runtime_log
2025-01-28 15:07:32 (2221435): Guest Log: -rw-------. 1 atlas atlas   1484800 Jan 28 14:07 result.tar.gz
2025-01-28 15:07:32 (2221435): Guest Log: -rw-r--r--. 1 atlas atlas     11016 Jan 28 14:07 runtime_log.err
2025-01-28 15:07:32 (2221435): Guest Log: -rw-------. 1 atlas atlas       685 Jan 28 14:07 ft9LDmfMww6nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmzWFKDmR2YrXo.diag
2025-01-28 15:07:32 (2221435): Guest Log: Looking for outputfile HITS.43078931._000248.pool.root.1
2025-01-28 15:07:32 (2221435): Guest Log: HITS file was successfully produced
2025-01-28 15:07:32 (2221435): Guest Log: -rw-------. 1 atlas atlas 347503783 Jan 28 14:05 /home/atlas/RunAtlas/HITS.43078931._000248.pool.root.1
2025-01-28 15:07:33 (2221435): Guest Log: Successfully finished the ATLAS job!
2025-01-28 15:07:33 (2221435): Guest Log: Copying the results back to the shared directory!
2025-01-28 15:07:33 (2221435): Guest Log:  *** Contents of shared directory: ***
2025-01-28 15:07:33 (2221435): Guest Log: total 337252
2025-01-28 15:07:33 (2221435): Guest Log: -rw-r--r--. 1 root root 343319876 Jan 28 09:25 ATLAS.root_0
2025-01-28 15:07:33 (2221435): Guest Log: -rw-r--r--. 1 root root      6890 Jan 28 09:25 init_data.xml
2025-01-28 15:07:33 (2221435): Guest Log: -rw-r--r--. 1 root root    503536 Jan 28 09:25 input.tar.gz
2025-01-28 15:07:33 (2221435): Guest Log: -rw-r--r--. 1 root root   1484800 Jan 28 14:07 result.tar.gz
2025-01-28 15:07:33 (2221435): Guest Log: -rw-r--r--. 1 root root     17569 Jan 28 09:25 start_atlas.sh
2025-01-28 15:07:33 (2221435): Guest Log:  *** Success! Shutting down the machine. ***
2025-01-28 15:07:33 (2221435): VM Completion File Detected.
2025-01-28 15:07:33 (2221435): Powering off VM.
2025-01-28 15:07:33 (2221435): Successfully stopped VM.
2025-01-28 15:07:33 (2221435): Deregistering VM. (boinc_b4298e36a626e3c1, slot#0)
2025-01-28 15:07:33 (2221435): Removing network bandwidth throttle group from VM.
2025-01-28 15:07:33 (2221435): Removing VM from VirtualBox.
15:07:38 (2221435): called boinc_finish(0)

</stderr_txt>
]]>

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