Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
setpriority: Permission denied
2025-01-28 12:36:59 (97004): Detected: vboxwrapper 26206
2025-01-28 12:36:59 (97004): Detected: BOINC client v8.0.2
2025-01-28 12:36:59 (97004): Detected: VirtualBox VboxManage Interface (Version: 7.0.22)
2025-01-28 12:36:59 (97004): Detected: Sandbox Configuration Enabled
2025-01-28 12:36:59 (97004): Successfully copied 'init_data.xml' to the shared directory.
2025-01-28 12:37:00 (97004): Create VM. (boinc_2a4a9b27f33a51bf, slot#3)
2025-01-28 12:37:00 (97004): Setting Memory Size for VM. (4800MB)
2025-01-28 12:37:00 (97004): Setting CPU Count for VM. (8)
2025-01-28 12:37:00 (97004): Setting Chipset Options for VM.
2025-01-28 12:37:00 (97004): Setting Graphics Controller Options for VM.
2025-01-28 12:37:01 (97004): Setting Boot Options for VM.
2025-01-28 12:37:01 (97004): Setting Network Configuration for NAT.
2025-01-28 12:37:01 (97004): Enabling VM Network Access.
2025-01-28 12:37:01 (97004): Disabling USB Support for VM.
2025-01-28 12:37:01 (97004): Disabling COM Port Support for VM.
2025-01-28 12:37:01 (97004): Disabling Audio Support for VM.
2025-01-28 12:37:02 (97004): Disabling Clipboard Support for VM.
2025-01-28 12:37:02 (97004): Disabling Drag and Drop Support for VM.
2025-01-28 12:37:02 (97004): Adding storage controller(s) to VM.
2025-01-28 12:37:02 (97004): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-01-28 12:37:04 (97004): Adding VirtualBox Guest Additions to VM.
2025-01-28 12:37:04 (97004): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-01-28 12:37:04 (97004): forwarding host port 50095 to guest port 80
2025-01-28 12:37:04 (97004): Enabling remote desktop for VM.
2025-01-28 12:37:04 (97004): Enabling shared directory for VM.
2025-01-28 12:37:05 (97004): Starting VM using VBoxManage interface. (boinc_2a4a9b27f33a51bf, slot#3)
2025-01-28 12:37:10 (97004): Successfully started VM. (PID = '97101')
2025-01-28 12:37:10 (97004): Reporting VM Process ID to BOINC.
2025-01-28 12:37:10 (97004): Guest Log: BIOS: VirtualBox 7.0.22
2025-01-28 12:37:10 (97004): Guest Log: CPUID EDX: 0x178bfbff
2025-01-28 12:37:10 (97004): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-01-28 12:37:10 (97004): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-01-28 12:37:10 (97004): VM state change detected. (old = 'poweredoff', new = 'running')
2025-01-28 12:37:10 (97004): Detected: Web Application Enabled (http://localhost:50095)
2025-01-28 12:37:10 (97004): Detected: Remote Desktop Enabled (localhost:50096)
2025-01-28 12:37:11 (97004): VM state change detected. (old = 'running', new = 'paused')
2025-01-28 12:38:11 (97004): Preference change detected
2025-01-28 12:38:11 (97004): Setting CPU throttle for VM. (100%)
2025-01-28 12:38:11 (97004): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-01-28 12:38:12 (97004): VM state change detected. (old = 'paused', new = 'running')
2025-01-28 12:38:13 (97004): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-01-28 12:38:13 (97004): Guest Log: BIOS: Booting from Hard Disk...
2025-01-28 12:38:18 (97004): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-01-28 12:38:18 (97004): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-01-28 12:38:18 (97004): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-01-28 12:38:18 (97004): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-01-28 12:38:18 (97004): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-01-28 12:38:18 (97004): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-01-28 12:38:18 (97004): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-01-28 12:38:18 (97004): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-01-28 12:38:18 (97004): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-01-28 12:38:18 (97004): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-01-28 12:38:18 (97004): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-01-28 12:38:18 (97004): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-01-28 12:38:18 (97004): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-01-28 12:38:18 (97004): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-01-28 12:38:18 (97004): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-01-28 12:38:18 (97004): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-01-28 12:38:18 (97004): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-01-28 12:38:18 (97004): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-01-28 12:38:18 (97004): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-01-28 12:38:18 (97004): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-01-28 12:38:18 (97004): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-01-28 12:38:18 (97004): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-01-28 12:38:18 (97004): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-01-28 12:38:18 (97004): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-01-28 12:38:18 (97004): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-01-28 12:38:18 (97004): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-01-28 12:38:18 (97004): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-01-28 12:38:18 (97004): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-01-28 12:38:18 (97004): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-01-28 12:38:18 (97004): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-01-28 12:38:18 (97004): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-01-28 12:38:18 (97004): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-01-28 12:38:34 (97004): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-01-28 12:38:35 (97004): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-01-28 12:38:51 (97004): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-01-28 12:38:51 (97004): Guest Log: 00:00:00.000257 main     Log opened 2025-01-28T17:37:48.426119000Z
2025-01-28 12:38:51 (97004): Guest Log: 00:00:00.000418 main     OS Product: Linux
2025-01-28 12:38:51 (97004): Guest Log: 00:00:00.000550 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-01-28 12:38:51 (97004): Guest Log: 00:00:00.000621 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-01-28 12:38:51 (97004): Guest Log: 00:00:00.000710 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-01-28 12:38:51 (97004): Guest Log: 00:00:00.000712 main     Process ID: 1371
2025-01-28 12:38:51 (97004): Guest Log: 00:00:00.000713 main     Package type: LINUX_64BITS_GENERIC
2025-01-28 12:38:51 (97004): Guest Log: 00:00:00.004153 main     5.2.32 r132073 started. Verbose level = 0
2025-01-28 12:38:51 (97004): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-01-28 12:38:51 (97004): Guest Log: [INFO] Mounting shared directory
2025-01-28 12:38:51 (97004): Guest Log: [INFO] Checking for init_data.xml
2025-01-28 12:39:42 (97004): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-01-28 12:39:42 (97004): Guest Log: [INFO] Detected branch: prod
2025-01-28 12:39:43 (97004): Guest Log: This is the prod version of the ATLAS job wrapper
2025-01-28 12:39:43 (97004): Guest Log: Copying input files
2025-01-28 12:39:49 (97004): Guest Log: Copied input files into RunAtlas.
2025-01-28 12:39:50 (97004): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-01-28 12:39:50 (97004): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-01-28 12:39:50 (97004): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-01-28 12:39:50 (97004): Guest Log: Further information can be found at the LHC@home message board.
2025-01-28 12:39:59 (97004): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-01-28 12:40:00 (97004): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-01-28 12:40:00 (97004): Guest Log: 2.6.3.0 1670 0 32164 142063 4 1 3117296 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-01-28 12:40:01 (97004): Guest Log: copied the webapp to /var/www
2025-01-28 12:40:01 (97004): Guest Log: ATHENA_PROC_NUMBER=8
2025-01-28 12:40:01 (97004): Guest Log: ATHENA_CORE_NUMBER=8
2025-01-28 12:40:02 (97004): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-01-28 12:40:02 (97004): Guest Log:  *** Starting ATLAS job. (PandaID=6493444701 taskID=43078943) ***
2025-01-28 12:50:36 (97004): VM state change detected. (old = 'running', new = 'paused')
2025-01-28 12:50:57 (97004): VM state change detected. (old = 'paused', new = 'running')
2025-01-28 13:45:52 (97004): VM state change detected. (old = 'running', new = 'paused')
2025-01-28 13:46:13 (97004): VM state change detected. (old = 'paused', new = 'running')
2025-01-28 13:57:18 (97004): VM state change detected. (old = 'running', new = 'paused')
2025-01-28 13:57:38 (97004): VM state change detected. (old = 'paused', new = 'running')
2025-01-28 14:13:53 (97004): VM state change detected. (old = 'running', new = 'paused')
2025-01-28 14:14:13 (97004): VM state change detected. (old = 'paused', new = 'running')
2025-01-28 14:19:37 (97004): Status Report: Elapsed Time: '6000.000000'
2025-01-28 14:19:37 (97004): Status Report: CPU Time: '33124.220000'
2025-01-28 15:59:37 (97004): Status Report: Elapsed Time: '12000.000000'
2025-01-28 15:59:37 (97004): Status Report: CPU Time: '77263.010000'
2025-01-28 17:16:51 (97004): VM state change detected. (old = 'running', new = 'paused')
2025-01-28 17:17:11 (97004): VM state change detected. (old = 'paused', new = 'running')
2025-01-28 17:20:40 (97004): VM state change detected. (old = 'running', new = 'paused')
2025-01-28 17:21:00 (97004): VM state change detected. (old = 'paused', new = 'running')
2025-01-28 17:40:20 (97004): Status Report: Elapsed Time: '18000.000000'
2025-01-28 17:40:20 (97004): Status Report: CPU Time: '120942.940000'
2025-01-28 17:50:56 (97004): VM state change detected. (old = 'running', new = 'paused')
2025-01-28 17:51:17 (97004): VM state change detected. (old = 'paused', new = 'running')
2025-01-28 19:20:42 (97004): Status Report: Elapsed Time: '24000.000000'
2025-01-28 19:20:42 (97004): Status Report: CPU Time: '164424.620000'
2025-01-28 20:45:29 (97004): VM state change detected. (old = 'running', new = 'paused')
2025-01-28 20:45:50 (97004): VM state change detected. (old = 'paused', new = 'running')
2025-01-28 20:48:14 (97004): VM state change detected. (old = 'running', new = 'paused')
2025-01-28 20:48:55 (97004): VM state change detected. (old = 'paused', new = 'running')
2025-01-28 20:58:16 (97004): Guest Log:  *** Job finished ***
2025-01-28 20:58:16 (97004): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-01-28 20:58:16 (97004): Guest Log: 2025-01-29 01:54:18,959 | INFO     | [data] copytool_out thread has finished
2025-01-28 20:58:16 (97004): Guest Log: 2025-01-29 01:54:19,534 | INFO     | [job] queue monitor thread has finished
2025-01-28 20:58:16 (97004): Guest Log: 2025-01-29 01:54:22,051 | INFO     | [data] queue_monitor thread has finished
2025-01-28 20:58:16 (97004): Guest Log: 2025-01-29 01:54:22,272 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140047742838592)>', '<ExcThread(monitor, started 140046896178944)>']
2025-01-28 20:58:16 (97004): Guest Log: 2025-01-29 01:54:22,824 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-01-28 20:58:16 (97004): Guest Log: 2025-01-29 01:54:22,824 | INFO     | [monitor] control thread has ended
2025-01-28 20:58:16 (97004): Guest Log: 2025-01-29 01:54:27,277 | INFO     | all workflow threads have been joined
2025-01-28 20:58:16 (97004): Guest Log: 2025-01-29 01:54:27,277 | INFO     | end of generic workflow (traces error code: 0)
2025-01-28 20:58:16 (97004): Guest Log: 2025-01-29 01:54:27,278 | INFO     | traces error code: 0
2025-01-28 20:58:16 (97004): Guest Log: 2025-01-29 01:54:27,278 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-01-28 20:58:16 (97004): Guest Log: 2025-01-29 01:54:27,422 [wrapper] ==== pilot stdout END ====
2025-01-28 20:58:16 (97004): Guest Log: 2025-01-29 01:54:27,441 [wrapper] ==== wrapper stdout RESUME ====
2025-01-28 20:58:16 (97004): Guest Log: 2025-01-29 01:54:27,458 [wrapper] pilotpid: 6085
2025-01-28 20:58:16 (97004): Guest Log: 2025-01-29 01:54:27,480 [wrapper] Pilot exit status: 0
2025-01-28 20:58:16 (97004): Guest Log: 2025-01-29 01:54:27,595 [wrapper] pandaids: 6493444701
2025-01-28 20:58:16 (97004): Guest Log: 2025-01-29 01:54:27,712 [wrapper] cleanup supervisor_pilot 28590 6086
2025-01-28 20:58:16 (97004): Guest Log: 2025-01-29 01:54:27,735 [wrapper] Test setup, not cleaning
2025-01-28 20:58:16 (97004): Guest Log: 2025-01-29 01:54:27,775 [wrapper] apfmon messages muted
2025-01-28 20:58:16 (97004): Guest Log: 2025-01-29 01:54:27,796 [wrapper] ==== wrapper stdout END ====
2025-01-28 20:58:16 (97004): Guest Log: 2025-01-29 01:54:27,815 [wrapper] ==== wrapper stderr END ====
2025-01-28 20:58:16 (97004): Guest Log:  *** Error codes and diagnostics ***
2025-01-28 20:58:16 (97004): Guest Log:     "exeErrorCode": 0,
2025-01-28 20:58:16 (97004): Guest Log:     "exeErrorDiag": "",
2025-01-28 20:58:16 (97004): Guest Log:     "pilotErrorCode": 0,
2025-01-28 20:58:16 (97004): Guest Log:     "pilotErrorDiag": "",
2025-01-28 20:58:16 (97004): Guest Log:  *** Listing of results directory ***
2025-01-28 20:58:16 (97004): Guest Log: total 363772
2025-01-28 20:58:16 (97004): Guest Log: -rw-r--r--. 1 atlas atlas    491065 Jan 28 08:07 pilot3.tar.gz
2025-01-28 20:58:16 (97004): Guest Log: -rw-r--r--. 1 atlas atlas      5652 Jan 28 08:21 queuedata.json
2025-01-28 20:58:16 (97004): Guest Log: -rwx------. 1 atlas atlas     34924 Jan 28 08:21 runpilot2-wrapper.sh
2025-01-28 20:58:16 (97004): Guest Log: -rw-r-----. 1 atlas atlas     17569 Jan 28 17:38 start_atlas.sh
2025-01-28 20:58:16 (97004): Guest Log: -rw-r-----. 1 atlas atlas    503535 Jan 28 17:38 input.tar.gz
2025-01-28 20:58:16 (97004): Guest Log: -rw-r--r--. 1 atlas atlas      6062 Jan 28 17:38 init_data.xml
2025-01-28 20:58:16 (97004): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jan 28 17:38 EVNT.43078940._000003.pool.root.1 -> /data/./ATLAS.root_0
2025-01-28 20:58:16 (97004): Guest Log: -rw-r--r--. 1 atlas atlas      2519 Jan 28 17:38 pandaJob.out
2025-01-28 20:58:16 (97004): Guest Log: -rw-------. 1 atlas atlas       424 Jan 28 17:39 setup.sh.local
2025-01-28 20:58:16 (97004): Guest Log: -rw-------. 1 atlas atlas    968256 Jan 28 17:41 agis_schedconf.cvmfs.json
2025-01-28 20:58:16 (97004): Guest Log: drwx------. 4 atlas atlas      4096 Jan 28 17:41 pilot3
2025-01-28 20:58:16 (97004): Guest Log: -rw-------. 1 atlas atlas 363967502 Jan 29 01:52 HITS.43078943._000114.pool.root.1
2025-01-28 20:58:16 (97004): Guest Log: -rw-------. 1 atlas atlas        95 Jan 29 01:53 pilot_heartbeat.json
2025-01-28 20:58:16 (97004): Guest Log: -rw-------. 1 atlas atlas      1036 Jan 29 01:53 memory_monitor_summary.json
2025-01-28 20:58:16 (97004): Guest Log: -rw-------. 1 atlas atlas   1580185 Jan 29 01:53 agis_ddmendpoints.agis.ALL.json
2025-01-28 20:58:16 (97004): Guest Log: -rw-------. 1 atlas atlas    467663 Jan 29 01:53 log.43078943._000114.job.log.tgz.1
2025-01-28 20:58:16 (97004): Guest Log: -rw-------. 1 atlas atlas      7746 Jan 29 01:54 heartbeat.json
2025-01-28 20:58:16 (97004): Guest Log: -rw-------. 1 atlas atlas      4275 Jan 29 01:54 pilotlog.txt
2025-01-28 20:58:16 (97004): Guest Log: -rw-------. 1 atlas atlas   1942458 Jan 29 01:54 log.43078943._000114.job.log.1
2025-01-28 20:58:16 (97004): Guest Log: -rw-------. 1 atlas atlas       357 Jan 29 01:54 output.list
2025-01-28 20:58:16 (97004): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jan 29 01:54 runtime_log
2025-01-28 20:58:16 (97004): Guest Log: -rw-------. 1 atlas atlas   2426880 Jan 29 01:54 result.tar.gz
2025-01-28 20:58:16 (97004): Guest Log: -rw-r--r--. 1 atlas atlas     10957 Jan 29 01:54 runtime_log.err
2025-01-28 20:58:16 (97004): Guest Log: -rw-------. 1 atlas atlas       666 Jan 29 01:54 extNDmt1vw6nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmmGFKDmQQZ3Mo.diag
2025-01-28 20:58:16 (97004): Guest Log: Looking for outputfile HITS.43078943._000114.pool.root.1
2025-01-28 20:58:16 (97004): Guest Log: HITS file was successfully produced
2025-01-28 20:58:16 (97004): Guest Log: -rw-------. 1 atlas atlas 363967502 Jan 29 01:52 /home/atlas/RunAtlas/HITS.43078943._000114.pool.root.1
2025-01-28 20:58:16 (97004): Guest Log: Successfully finished the ATLAS job!
2025-01-28 20:58:16 (97004): Guest Log: Copying the results back to the shared directory!
2025-01-28 20:58:17 (97004): Guest Log:  *** Contents of shared directory: ***
2025-01-28 20:58:17 (97004): Guest Log: total 346328
2025-01-28 20:58:17 (97004): Guest Log: -rw-rw----. 1 root root 351676822 Jan 28 17:36 ATLAS.root_0
2025-01-28 20:58:17 (97004): Guest Log: -rw-rw-r--. 1 root root      6062 Jan 28 17:36 init_data.xml
2025-01-28 20:58:17 (97004): Guest Log: -rw-rw----. 1 root root    503535 Jan 28 17:36 input.tar.gz
2025-01-28 20:58:17 (97004): Guest Log: -rw-r--r--. 1 root root   2426880 Jan 29  2025 result.tar.gz
2025-01-28 20:58:17 (97004): Guest Log: -rw-rw----. 1 root root     17569 Jan 28 17:36 start_atlas.sh
2025-01-28 20:58:17 (97004): Guest Log:  *** Success! Shutting down the machine. ***
2025-01-28 20:58:17 (97004): VM Completion File Detected.
2025-01-28 20:58:17 (97004): Powering off VM.
2025-01-28 20:58:18 (97004): Successfully stopped VM.
2025-01-28 20:58:18 (97004): Deregistering VM. (boinc_2a4a9b27f33a51bf, slot#3)
2025-01-28 20:58:18 (97004): Removing network bandwidth throttle group from VM.
2025-01-28 20:58:18 (97004): Removing VM from VirtualBox.
20:58:23 (97004): called boinc_finish(0)

</stderr_txt>
]]>

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