Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:59:40 (3641120): wrapper (7.7.26015): starting
00:59:40 (3641120): wrapper: running run_atlas (--nthreads 2)
[2024-12-16 00:59:40] Arguments: --nthreads 2
[2024-12-16 00:59:40] Threads: 2
[2024-12-16 00:59:40] Checking for CVMFS
[2024-12-16 00:59:41] Probing /cvmfs/atlas.cern.ch... OK
[2024-12-16 00:59:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-12-16 00:59:41] Running cvmfs_config stat atlas.cern.ch
[2024-12-16 00:59:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-12-16 00:59:41] 2.11.5.0 6557 6344 61004 140489 1 123 4011931 6144000 1650 130560 4 26304581 99.994 873179 1193 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2024-12-16 00:59:41] CVMFS is ok
[2024-12-16 00:59:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-12-16 00:59:41] Small home clusters do not require a local http proxy but it is suggested if
[2024-12-16 00:59:41] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2024-12-16 00:59:41] Further information can be found at the LHC@home message board.
[2024-12-16 00:59:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-12-16 00:59:41] Checking for apptainer binary...
[2024-12-16 00:59:41] apptainer is not installed, using version from CVMFS
[2024-12-16 00:59:41] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-12-16 00:59:41] k8plus
[2024-12-16 00:59:41] apptainer works
[2024-12-16 00:59:41] Set ATHENA_PROC_NUMBER=2
[2024-12-16 00:59:41] Set ATHENA_CORE_NUMBER=2
[2024-12-16 00:59:41] Starting ATLAS job with PandaID=6443342924
[2024-12-16 00:59:41] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-12-16 02:49:14]  *** The last 200 lines of the pilot log: ***
[2024-12-16 02:49:14] 2024-12-16 10:49:01,909 | INFO     | mean x: 1734342848.0
[2024-12-16 02:49:14] 2024-12-16 10:49:01,909 | INFO     | mean y: 1548915.7009345794
[2024-12-16 02:49:14] 2024-12-16 10:49:01,909 | INFO     | -- intersect: -197388967073.36603
[2024-12-16 02:49:14] 2024-12-16 10:49:01,909 | INFO     | intersect: -197388967073.36603
[2024-12-16 02:49:14] 2024-12-16 10:49:01,909 | INFO     | chi2: 8.858873676035053
[2024-12-16 02:49:14] 2024-12-16 10:49:01,909 | INFO     | model: linear, x: [1734339615.0, 1734339676.0, 1734339737.0, 1734339798.0, 1734339859.0, 1734339920.0, 1734339981.0, 1734340042.0, 1734340103.0, 1734340164.0, 1734
[2024-12-16 02:49:14] 2024-12-16 10:49:01,909 | INFO     | sum of square deviations: 329031285.5
[2024-12-16 02:49:14] 2024-12-16 10:49:01,909 | INFO     | sum of deviations: 55900945584.0
[2024-12-16 02:49:14] 2024-12-16 10:49:01,909 | INFO     | mean x: 1734342695.5
[2024-12-16 02:49:14] 2024-12-16 10:49:01,909 | INFO     | mean y: 1587059.1764705882
[2024-12-16 02:49:14] 2024-12-16 10:49:01,909 | INFO     | -- intersect: -294655489388.20404
[2024-12-16 02:49:14] 2024-12-16 10:49:01,909 | INFO     | intersect: -294655489388.20404
[2024-12-16 02:49:14] 2024-12-16 10:49:01,910 | INFO     | chi2: 5.840716329039509
[2024-12-16 02:49:14] 2024-12-16 10:49:01,910 | INFO     | current chi2=5.840716329039509 (change=34.069312390809195 %)
[2024-12-16 02:49:14] 2024-12-16 10:49:01,910 | INFO     | model: linear, x: [1734339615.0, 1734339676.0, 1734339737.0, 1734339798.0, 1734339859.0, 1734339920.0, 1734339981.0, 1734340042.0, 1734340103.0, 1734340164.0, 1734
[2024-12-16 02:49:14] 2024-12-16 10:49:01,910 | INFO     | sum of square deviations: 282974608.0
[2024-12-16 02:49:14] 2024-12-16 10:49:01,910 | INFO     | sum of deviations: 61894671872.00001
[2024-12-16 02:49:14] 2024-12-16 10:49:01,910 | INFO     | mean x: 1734342543.0
[2024-12-16 02:49:14] 2024-12-16 10:49:01,910 | INFO     | mean y: 1605936.8453608248
[2024-12-16 02:49:14] 2024-12-16 10:49:01,910 | INFO     | -- intersect: -379348906716.3432
[2024-12-16 02:49:14] 2024-12-16 10:49:01,910 | INFO     | intersect: -379348906716.3432
[2024-12-16 02:49:14] 2024-12-16 10:49:01,910 | INFO     | chi2: 3.6494388678041374
[2024-12-16 02:49:14] 2024-12-16 10:49:01,910 | INFO     | current chi2=3.6494388678041374 (change=37.51727250201383 %)
[2024-12-16 02:49:14] 2024-12-16 10:49:01,910 | INFO     | model: linear, x: [1734339615.0, 1734339676.0, 1734339737.0, 1734339798.0, 1734339859.0, 1734339920.0, 1734339981.0, 1734340042.0, 1734340103.0, 1734340164.0, 1734
[2024-12-16 02:49:14] 2024-12-16 10:49:01,910 | INFO     | sum of square deviations: 241429643.0
[2024-12-16 02:49:14] 2024-12-16 10:49:01,910 | INFO     | sum of deviations: 57320436415.5
[2024-12-16 02:49:14] 2024-12-16 10:49:01,911 | INFO     | mean x: 1734342390.5
[2024-12-16 02:49:14] 2024-12-16 10:49:01,911 | INFO     | mean y: 1589136.5108695652
[2024-12-16 02:49:14] 2024-12-16 10:49:01,911 | INFO     | -- intersect: -411767493905.8789
[2024-12-16 02:49:14] 2024-12-16 10:49:01,911 | INFO     | intersect: -411767493905.8789
[2024-12-16 02:49:14] 2024-12-16 10:49:01,911 | INFO     | chi2: 3.391689890457733
[2024-12-16 02:49:14] 2024-12-16 10:49:01,911 | INFO     | current chi2=3.391689890457733 (change=7.062701601068105 %)
[2024-12-16 02:49:14] 2024-12-16 10:49:01,911 | INFO     | right removable region: 91
[2024-12-16 02:49:14] 2024-12-16 10:49:01,911 | INFO     | model: linear, x: [1734339920.0, 1734339981.0, 1734340042.0, 1734340103.0, 1734340164.0, 1734340225.0, 1734340286.0, 1734340347.0, 1734340408.0, 1734340469.0, 1734
[2024-12-16 02:49:14] 2024-12-16 10:49:01,911 | INFO     | sum of square deviations: 329031285.5
[2024-12-16 02:49:14] 2024-12-16 10:49:01,911 | INFO     | sum of deviations: 28560822565.999996
[2024-12-16 02:49:14] 2024-12-16 10:49:01,911 | INFO     | mean x: 1734343000.5
[2024-12-16 02:49:14] 2024-12-16 10:49:01,911 | INFO     | mean y: 1592645.9411764706
[2024-12-16 02:49:14] 2024-12-16 10:49:01,911 | INFO     | -- intersect: -150544160565.92035
[2024-12-16 02:49:14] 2024-12-16 10:49:01,911 | INFO     | intersect: -150544160565.92035
[2024-12-16 02:49:14] 2024-12-16 10:49:01,911 | INFO     | chi2: 7.4573484158515235
[2024-12-16 02:49:14] 2024-12-16 10:49:01,911 | INFO     | current chi2=7.4573484158515235 (change=15.820580713041693 %)
[2024-12-16 02:49:14] 2024-12-16 10:49:01,911 | INFO     | left removable region: 10
[2024-12-16 02:49:14] 2024-12-16 10:49:01,911 | INFO     | model: linear, x: [1734340225.0, 1734340286.0, 1734340347.0, 1734340408.0, 1734340469.0, 1734340530.0, 1734340591.0, 1734340652.0, 1734340713.0, 1734340774.0, 1734
[2024-12-16 02:49:14] 2024-12-16 10:49:01,911 | INFO     | sum of square deviations: 164765880.0
[2024-12-16 02:49:14] 2024-12-16 10:49:01,912 | INFO     | sum of deviations: 34461580279.0
[2024-12-16 02:49:14] 2024-12-16 10:49:01,912 | INFO     | mean x: 1734342665.0
[2024-12-16 02:49:14] 2024-12-16 10:49:01,912 | INFO     | mean y: 1681791.4691358025
[2024-12-16 02:49:14] 2024-12-16 10:49:01,912 | INFO     | -- intersect: -362744470392.4194
[2024-12-16 02:49:14] 2024-12-16 10:49:01,912 | INFO     | intersect: -362744470392.4194
[2024-12-16 02:49:14] 2024-12-16 10:49:01,912 | INFO     | chi2: 2.1959329137261223
[2024-12-16 02:49:14] 2024-12-16 10:49:01,912 | INFO     | -- intersect: -362744470392.4194
[2024-12-16 02:49:14] 2024-12-16 10:49:01,912 | INFO     | current memory leak: 209.15 B/s (using 81 data points, chi2=2.20)
[2024-12-16 02:49:14] 2024-12-16 10:49:01,913 | INFO     | ..............................
[2024-12-16 02:49:14] 2024-12-16 10:49:01,913 | INFO     | . Timing measurements:
[2024-12-16 02:49:14] 2024-12-16 10:49:01,913 | INFO     | . get job = 0 s
[2024-12-16 02:49:14] 2024-12-16 10:49:01,913 | INFO     | . initial setup = 3 s
[2024-12-16 02:49:14] 2024-12-16 10:49:01,913 | INFO     | . payload setup = 5 s
[2024-12-16 02:49:14] 2024-12-16 10:49:01,913 | INFO     | . stage-in = 0 s
[2024-12-16 02:49:14] 2024-12-16 10:49:01,913 | INFO     | . payload execution = 6518 s
[2024-12-16 02:49:14] 2024-12-16 10:49:01,913 | INFO     | . stage-out = 0 s
[2024-12-16 02:49:14] 2024-12-16 10:49:01,913 | INFO     | . log creation = 0 s
[2024-12-16 02:49:14] 2024-12-16 10:49:01,913 | INFO     | ..............................
[2024-12-16 02:49:14] 2024-12-16 10:49:01,990 | WARNING  | process 3664829 can no longer be monitored (due to stat problems) - aborting
[2024-12-16 02:49:14] 2024-12-16 10:49:01,990 | INFO     | using path: /var/lib/boinc-client/slots/3/PanDA_Pilot-6443342924/memory_monitor_summary.json (trf name=prmon)
[2024-12-16 02:49:14] 2024-12-16 10:49:02,085 | INFO     | number of running child processes to parent process 3664829: 1
[2024-12-16 02:49:14] 2024-12-16 10:49:02,086 | INFO     | maximum number of monitored processes: 9
[2024-12-16 02:49:14] 2024-12-16 10:49:02,086 | INFO     | aborting job monitoring since job object (job id=6443342924) has expired
[2024-12-16 02:49:14] 2024-12-16 10:49:02,410 | INFO     | 
[2024-12-16 02:49:14] 2024-12-16 10:49:02,410 | INFO     | job summary report
[2024-12-16 02:49:14] 2024-12-16 10:49:02,410 | INFO     | --------------------------------------------------
[2024-12-16 02:49:14] 2024-12-16 10:49:02,410 | INFO     | PanDA job id: 6443342924
[2024-12-16 02:49:14] 2024-12-16 10:49:02,411 | INFO     | task id: 42386615
[2024-12-16 02:49:14] 2024-12-16 10:49:02,411 | INFO     | errors: (none)
[2024-12-16 02:49:14] 2024-12-16 10:49:02,411 | INFO     | status: LOG_TRANSFER = DONE 
[2024-12-16 02:49:14] 2024-12-16 10:49:02,411 | INFO     | pilot state: finished 
[2024-12-16 02:49:14] 2024-12-16 10:49:02,411 | INFO     | transexitcode: 0
[2024-12-16 02:49:14] 2024-12-16 10:49:02,411 | INFO     | exeerrorcode: 0
[2024-12-16 02:49:14] 2024-12-16 10:49:02,411 | INFO     | exeerrordiag: 
[2024-12-16 02:49:14] 2024-12-16 10:49:02,412 | INFO     | exitcode: 0
[2024-12-16 02:49:14] 2024-12-16 10:49:02,412 | INFO     | exitmsg: OK
[2024-12-16 02:49:14] 2024-12-16 10:49:02,412 | INFO     | cpuconsumptiontime: 8492 s
[2024-12-16 02:49:14] 2024-12-16 10:49:02,412 | INFO     | nevents: 50
[2024-12-16 02:49:14] 2024-12-16 10:49:02,412 | INFO     | neventsw: 0
[2024-12-16 02:49:14] 2024-12-16 10:49:02,412 | INFO     | pid: 3664829
[2024-12-16 02:49:14] 2024-12-16 10:49:02,412 | INFO     | pgrp: 3664829
[2024-12-16 02:49:14] 2024-12-16 10:49:02,412 | INFO     | corecount: 2
[2024-12-16 02:49:14] 2024-12-16 10:49:02,412 | INFO     | event service: False
[2024-12-16 02:49:14] 2024-12-16 10:49:02,412 | INFO     | sizes: {0: 2369537, 3: 2369743, 11: 2369771, 6527: 2397570, 6528: 2406577, 6535: 2406743}
[2024-12-16 02:49:14] 2024-12-16 10:49:02,412 | INFO     | --------------------------------------------------
[2024-12-16 02:49:14] 2024-12-16 10:49:02,412 | INFO     | 
[2024-12-16 02:49:14] 2024-12-16 10:49:02,412 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/3
[2024-12-16 02:49:14] 2024-12-16 10:49:02,465 | INFO     | queue jobs had 0 job(s) [purged]
[2024-12-16 02:49:14] 2024-12-16 10:49:02,465 | INFO     | queue payloads had 0 job(s) [purged]
[2024-12-16 02:49:14] 2024-12-16 10:49:02,465 | INFO     | queue data_in had 0 job(s) [purged]
[2024-12-16 02:49:14] 2024-12-16 10:49:02,465 | INFO     | queue data_out had 0 job(s) [purged]
[2024-12-16 02:49:14] 2024-12-16 10:49:02,465 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-12-16 02:49:14] 2024-12-16 10:49:02,465 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-12-16 02:49:14] 2024-12-16 10:49:02,465 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-12-16 02:49:14] 2024-12-16 10:49:02,465 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-12-16 02:49:14] 2024-12-16 10:49:02,465 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-12-16 02:49:14] 2024-12-16 10:49:02,465 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-12-16 02:49:14] 2024-12-16 10:49:02,465 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-12-16 02:49:14] 2024-12-16 10:49:02,465 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-12-16 02:49:14] 2024-12-16 10:49:02,465 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-12-16 02:49:14] 2024-12-16 10:49:02,465 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-12-16 02:49:14] 2024-12-16 10:49:02,465 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-12-16 02:49:14] 2024-12-16 10:49:02,465 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-12-16 02:49:14] 2024-12-16 10:49:02,465 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-12-16 02:49:14] 2024-12-16 10:49:02,465 | INFO     | queue completed_jobids has 1 job(s)
[2024-12-16 02:49:14] 2024-12-16 10:49:02,465 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-12-16 02:49:14] 2024-12-16 10:49:02,466 | INFO     | queue messages had 0 job(s) [purged]
[2024-12-16 02:49:14] 2024-12-16 10:49:02,466 | INFO     | job 6443342924 has completed (purged errors)
[2024-12-16 02:49:14] 2024-12-16 10:49:02,466 | INFO     | overall cleanup function is called
[2024-12-16 02:49:14] 2024-12-16 10:49:03,476 | INFO     | --- collectZombieJob: --- 10, [3664829]
[2024-12-16 02:49:14] 2024-12-16 10:49:03,476 | INFO     | zombie collector waiting for pid 3664829
[2024-12-16 02:49:14] 2024-12-16 10:49:03,477 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-12-16 02:49:14] 2024-12-16 10:49:03,477 | INFO     | collected zombie processes
[2024-12-16 02:49:14] 2024-12-16 10:49:03,477 | INFO     | will attempt to kill all subprocesses of pid=3664829
[2024-12-16 02:49:14] 2024-12-16 10:49:03,575 | INFO     | process IDs to be killed: [3664829] (in reverse order)
[2024-12-16 02:49:14] 2024-12-16 10:49:03,686 | WARNING  | found no corresponding commands to process id(s)
[2024-12-16 02:49:14] 2024-12-16 10:49:03,686 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-12-16 02:49:14] 2024-12-16 10:49:03,689 | INFO     | did not find any defunct processes belonging to 3664829
[2024-12-16 02:49:14] 2024-12-16 10:49:03,691 | INFO     | did not find any defunct processes belonging to 3664829
[2024-12-16 02:49:14] 2024-12-16 10:49:03,691 | INFO     | ready for new job
[2024-12-16 02:49:14] 2024-12-16 10:49:03,691 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-12-16 02:49:14] 2024-12-16 10:49:03,692 | INFO     | *************************************
[2024-12-16 02:49:14] 2024-12-16 10:49:03,692 | INFO     | ***  PanDA Pilot version 3.9.3.2  ***
[2024-12-16 02:49:14] 2024-12-16 10:49:03,692 | INFO     | *************************************
[2024-12-16 02:49:14] 2024-12-16 10:49:03,692 | INFO     | 
[2024-12-16 02:49:14] 2024-12-16 10:49:03,693 | INFO     | architecture information:
[2024-12-16 02:49:14] 2024-12-16 10:49:03,693 | INFO     | executing command: cat /etc/os-release
[2024-12-16 02:49:14] 2024-12-16 10:49:03,710 | INFO     | cat /etc/os-release:
[2024-12-16 02:49:14] NAME="CentOS Linux"
[2024-12-16 02:49:14] VERSION="7 (Core)"
[2024-12-16 02:49:14] ID="centos"
[2024-12-16 02:49:14] ID_LIKE="rhel fedora"
[2024-12-16 02:49:14] VERSION_ID="7"
[2024-12-16 02:49:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-12-16 02:49:14] ANSI_COLOR="0;31"
[2024-12-16 02:49:14] CPE_NAME="cpe:/o:centos:centos:7"
[2024-12-16 02:49:14] HOME_URL="https://www.centos.org/"
[2024-12-16 02:49:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-12-16 02:49:14] 
[2024-12-16 02:49:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-12-16 02:49:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-12-16 02:49:14] REDHAT_SUPPORT_PRODUCT="centos"
[2024-12-16 02:49:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-12-16 02:49:14] 
[2024-12-16 02:49:14] 2024-12-16 10:49:03,710 | INFO     | *************************************
[2024-12-16 02:49:14] 2024-12-16 10:49:04,212 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/3
[2024-12-16 02:49:14] 2024-12-16 10:49:04,236 | INFO     | sufficient remaining disk space (129636499456 B)
[2024-12-16 02:49:14] 2024-12-16 10:49:04,237 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-12-16 02:49:14] 2024-12-16 10:49:04,237 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-12-16 02:49:14] 2024-12-16 10:49:04,352 | INFO     | found 0 job(s) in 20 queues
[2024-12-16 02:49:14] 2024-12-16 10:49:04,352 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-12-16 02:49:14] 2024-12-16 10:49:04,352 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-12-16 02:49:14] 2024-12-16 10:49:04,397 | INFO     | all data control threads have been joined
[2024-12-16 02:49:14] 2024-12-16 10:49:04,589 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-12-16 02:49:14] 2024-12-16 10:49:04,589 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-12-16 02:49:14] 2024-12-16 10:49:04,589 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-12-16 02:49:14] 2024-12-16 10:49:04,589 | INFO     | will abort loop
[2024-12-16 02:49:14] 2024-12-16 10:49:04,909 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-12-16 02:49:14] 2024-12-16 10:49:04,960 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-12-16 02:49:14] 2024-12-16 10:49:05,124 | INFO     | all job control threads have been joined
[2024-12-16 02:49:14] 2024-12-16 10:49:05,242 | INFO     | [job] retrieve thread has finished
[2024-12-16 02:49:14] 2024-12-16 10:49:05,281 | INFO     | [payload] execute_payloads thread has finished
[2024-12-16 02:49:14] 2024-12-16 10:49:05,337 | INFO     | [data] copytool_in thread has finished
[2024-12-16 02:49:14] 2024-12-16 10:49:05,402 | INFO     | [data] control thread has finished
[2024-12-16 02:49:14] 2024-12-16 10:49:05,594 | INFO     | [job] job monitor thread has finished
[2024-12-16 02:49:14] 2024-12-16 10:49:05,637 | INFO     | all payload control threads have been joined
[2024-12-16 02:49:14] 2024-12-16 10:49:05,667 | INFO     | [payload] run_realtimelog thread has finished
[2024-12-16 02:49:14] 2024-12-16 10:49:06,019 | INFO     | [payload] validate_post thread has finished
[2024-12-16 02:49:14] 2024-12-16 10:49:06,130 | INFO     | [job] control thread has finished
[2024-12-16 02:49:14] 2024-12-16 10:49:06,367 | INFO     | [job] validate thread has finished
[2024-12-16 02:49:14] 2024-12-16 10:49:06,464 | INFO     | [payload] failed_post thread has finished
[2024-12-16 02:49:14] 2024-12-16 10:49:06,553 | INFO     | [job] create_data_payload thread has finished
[2024-12-16 02:49:14] 2024-12-16 10:49:06,614 | INFO     | [payload] validate_pre thread has finished
[2024-12-16 02:49:14] 2024-12-16 10:49:06,643 | INFO     | [payload] control thread has finished
[2024-12-16 02:49:14] 2024-12-16 10:49:06,915 | INFO     | [data] copytool_out thread has finished
[2024-12-16 02:49:14] 2024-12-16 10:49:06,987 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-12-16 02:49:14] 2024-12-16 10:49:07,992 | INFO     | [job] queue monitor thread has finished
[2024-12-16 02:49:14] 2024-12-16 10:49:08,966 | INFO     | [data] queue_monitor thread has finished
[2024-12-16 02:49:14] 2024-12-16 10:49:09,226 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 129115901028160)>', '<ExcThread(monitor, started 129115340408576)>']
[2024-12-16 02:49:14] 2024-12-16 10:49:09,377 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-12-16 02:49:14] 2024-12-16 10:49:09,385 | INFO     | [monitor] control thread has ended
[2024-12-16 02:49:14] 2024-12-16 10:49:14,251 | INFO     | all workflow threads have been joined
[2024-12-16 02:49:14] 2024-12-16 10:49:14,252 | INFO     | end of generic workflow (traces error code: 0)
[2024-12-16 02:49:14] 2024-12-16 10:49:14,252 | INFO     | traces error code: 0
[2024-12-16 02:49:14] 2024-12-16 10:49:14,252 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-12-16 02:49:14] 2024-12-16 10:49:14,411 [wrapper] ==== pilot stdout END ====
[2024-12-16 02:49:14] 2024-12-16 10:49:14,419 [wrapper] ==== wrapper stdout RESUME ====
[2024-12-16 02:49:14] 2024-12-16 10:49:14,427 [wrapper] pilotpid: 3645162
[2024-12-16 02:49:14] 2024-12-16 10:49:14,434 [wrapper] Pilot exit status: 0
[2024-12-16 02:49:14] 2024-12-16 10:49:14,448 [wrapper] pandaids: 6443342924
[2024-12-16 02:49:14] 2024-12-16 10:49:14,479 [wrapper] cleanup supervisor_pilot 3769975 3645163
[2024-12-16 02:49:14] 2024-12-16 10:49:14,485 [wrapper] Test setup, not cleaning
[2024-12-16 02:49:14] 2024-12-16 10:49:14,496 [wrapper] apfmon messages muted
[2024-12-16 02:49:14] 2024-12-16 10:49:14,501 [wrapper] ==== wrapper stdout END ====
[2024-12-16 02:49:14] 2024-12-16 10:49:14,504 [wrapper] ==== wrapper stderr END ====
[2024-12-16 02:49:14]  *** Error codes and diagnostics ***
[2024-12-16 02:49:14]     "exeErrorCode": 0,
[2024-12-16 02:49:14]     "exeErrorDiag": "",
[2024-12-16 02:49:14]     "pilotErrorCode": 0,
[2024-12-16 02:49:14]     "pilotErrorDiag": "",
[2024-12-16 02:49:14]  *** Listing of results directory ***
[2024-12-16 02:49:14] total 392880
[2024-12-16 02:49:14] -rw-r--r-- 1 boinc boinc    489974 Dec 15 22:49 pilot3.tar.gz
[2024-12-16 02:49:14] -rwx------ 1 boinc boinc     34924 Dec 15 23:02 runpilot2-wrapper.sh
[2024-12-16 02:49:14] -rw-r--r-- 1 boinc boinc      5651 Dec 15 23:02 queuedata.json
[2024-12-16 02:49:14] -rw-r--r-- 1 boinc boinc       100 Dec 16 00:59 wrapper_26015_x86_64-pc-linux-gnu
[2024-12-16 02:49:14] -rwxr-xr-x 1 boinc boinc      7986 Dec 16 00:59 run_atlas
[2024-12-16 02:49:14] -rw-r--r-- 1 boinc boinc       105 Dec 16 00:59 job.xml
[2024-12-16 02:49:14] -rw-r--r-- 2 boinc boinc     17567 Dec 16 00:59 start_atlas.sh
[2024-12-16 02:49:14] drwxrwx--x 2 boinc boinc      4096 Dec 16 00:59 shared
[2024-12-16 02:49:14] -rw-r--r-- 2 boinc boinc    502806 Dec 16 00:59 input.tar.gz
[2024-12-16 02:49:14] -rw-r--r-- 1 boinc boinc      9946 Dec 16 00:59 init_data.xml
[2024-12-16 02:49:14] -rw-r--r-- 2 boinc boinc 358925451 Dec 16 00:59 EVNT.42386612._000123.pool.root.1
[2024-12-16 02:49:14] -rw-r--r-- 1 boinc boinc         0 Dec 16 00:59 boinc_lockfile
[2024-12-16 02:49:14] -rw-r--r-- 1 boinc boinc      2812 Dec 16 00:59 pandaJob.out
[2024-12-16 02:49:14] -rw------- 1 boinc boinc       424 Dec 16 00:59 setup.sh.local
[2024-12-16 02:49:14] -rw------- 1 boinc boinc    982909 Dec 16 00:59 agis_schedconf.cvmfs.json
[2024-12-16 02:49:14] -rw------- 1 boinc boinc   1572020 Dec 16 00:59 agis_ddmendpoints.agis.ALL.json
[2024-12-16 02:49:14] drwx------ 4 boinc boinc      4096 Dec 16 00:59 pilot3
[2024-12-16 02:49:14] -rw-r--r-- 1 boinc boinc       528 Dec 16 02:40 boinc_task_state.xml
[2024-12-16 02:49:14] -rw------- 1 boinc boinc        95 Dec 16 02:48 pilot_heartbeat.json
[2024-12-16 02:49:14] -rw------- 1 boinc boinc  37356981 Dec 16 02:48 HITS.42386615._034383.pool.root.1
[2024-12-16 02:49:14] -rw------- 1 boinc boinc      1020 Dec 16 02:48 memory_monitor_summary.json
[2024-12-16 02:49:14] -rw------- 1 boinc boinc    539003 Dec 16 02:48 log.42386615._034383.job.log.tgz.1
[2024-12-16 02:49:14] -rw------- 1 boinc boinc      8434 Dec 16 02:49 heartbeat.json
[2024-12-16 02:49:14] -rw-r--r-- 1 boinc boinc        26 Dec 16 02:49 wrapper_checkpoint.txt
[2024-12-16 02:49:14] -rw-r--r-- 1 boinc boinc      8192 Dec 16 02:49 boinc_mmap_file
[2024-12-16 02:49:14] -rw------- 1 boinc boinc      4405 Dec 16 02:49 pilotlog.txt
[2024-12-16 02:49:14] -rw------- 1 boinc boinc    573766 Dec 16 02:49 log.42386615._034383.job.log.1
[2024-12-16 02:49:14] -rw------- 1 boinc boinc       353 Dec 16 02:49 output.list
[2024-12-16 02:49:14] -rw-r--r-- 1 boinc boinc       620 Dec 16 02:49 runtime_log
[2024-12-16 02:49:14] -rw------- 1 boinc boinc   1136640 Dec 16 02:49 result.tar.gz
[2024-12-16 02:49:14] -rw-r--r-- 1 boinc boinc     11117 Dec 16 02:49 runtime_log.err
[2024-12-16 02:49:14] -rw------- 1 boinc boinc       649 Dec 16 02:49 0AzLDmlIKh6nsSi4ap6QjLDmwznN0nGgGQJmq4hLDmmPGMDmziGw4m.diag
[2024-12-16 02:49:14] -rw-r--r-- 1 boinc boinc     21649 Dec 16 02:49 stderr.txt
[2024-12-16 02:49:14] HITS file was successfully produced:
[2024-12-16 02:49:14] -rw------- 1 boinc boinc 37356981 Dec 16 02:48 shared/HITS.pool.root.1
[2024-12-16 02:49:14]  *** Contents of shared directory: ***
[2024-12-16 02:49:14] total 388628
[2024-12-16 02:49:14] -rw-r--r-- 2 boinc boinc     17567 Dec 16 00:59 start_atlas.sh
[2024-12-16 02:49:14] -rw-r--r-- 2 boinc boinc    502806 Dec 16 00:59 input.tar.gz
[2024-12-16 02:49:14] -rw-r--r-- 2 boinc boinc 358925451 Dec 16 00:59 ATLAS.root_0
[2024-12-16 02:49:14] -rw------- 1 boinc boinc  37356981 Dec 16 02:48 HITS.pool.root.1
[2024-12-16 02:49:14] -rw------- 1 boinc boinc   1136640 Dec 16 02:49 result.tar.gz
02:49:16 (3641120): run_atlas exited; CPU time 8413.704758
02:49:16 (3641120): called boinc_finish(0)

</stderr_txt>
]]>

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