Stderr output

<core_client_version>7.18.1</core_client_version>
<![CDATA[
<stderr_txt>
21:11:23 (244978): wrapper (7.7.26015): starting
21:11:23 (244978): wrapper: running run_atlas (--nthreads 2)
[2024-11-09 21:11:23] Arguments: --nthreads 2
[2024-11-09 21:11:23] Threads: 2
[2024-11-09 21:11:23] Checking for CVMFS
[2024-11-09 21:11:23] Probing /cvmfs/atlas.cern.ch... OK
[2024-11-09 21:11:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-11-09 21:11:23] Running cvmfs_config stat atlas.cern.ch
[2024-11-09 21:11:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-11-09 21:11:23] 2.11.5.0 64556 10 34232 139290 1 24 2163233 4096000 0 130560 0 439961 99.997 57407 1948 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2024-11-09 21:11:23] CVMFS is ok
[2024-11-09 21:11:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-11-09 21:11:23] Small home clusters do not require a local http proxy but it is suggested if
[2024-11-09 21:11:23] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2024-11-09 21:11:23] Further information can be found at the LHC@home message board.
[2024-11-09 21:11:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-11-09 21:11:23] Checking for apptainer binary...
[2024-11-09 21:11:23] apptainer is not installed, using version from CVMFS
[2024-11-09 21:11:23] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-11-09 21:11:23] Tmum
[2024-11-09 21:11:23] apptainer works
[2024-11-09 21:11:23] Set ATHENA_PROC_NUMBER=2
[2024-11-09 21:11:23] Set ATHENA_CORE_NUMBER=2
[2024-11-09 21:11:23] Starting ATLAS job with PandaID=6397256202
[2024-11-09 21:11:23] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/home/pdw/Mo/1/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-11-09 22:46:33]  *** The last 200 lines of the pilot log: ***
[2024-11-09 22:46:33]  direct_access_wan=False
[2024-11-09 22:46:33]  domain=
[2024-11-09 22:46:33]  filesize=550826
[2024-11-09 22:46:33]  filetype=log
[2024-11-09 22:46:33]  guid=b90cf506-2912-41ed-8155-e2298e9329a4
[2024-11-09 22:46:33]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-11-09 22:46:33]  is_altstaged=None
[2024-11-09 22:46:33]  is_tar=False
[2024-11-09 22:46:33]  lfn=log.41843793._010121.job.log.tgz.1
[2024-11-09 22:46:33]  mtime=0
[2024-11-09 22:46:33]  protocol_id=None
[2024-11-09 22:46:33]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-11-09 22:46:33]  replicas=None
[2024-11-09 22:46:33]  scope=mc16_13TeV
[2024-11-09 22:46:33]  status=None
[2024-11-09 22:46:33]  status_code=0
[2024-11-09 22:46:33]  storage_token=
[2024-11-09 22:46:33]  surl=/home/pdw/Mo/1/slots/2/PanDA_Pilot-6397256202/log.41843793._010121.job.log.tgz.1
[2024-11-09 22:46:33]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/04/cb/log.41843793._010121.job.log.tgz.1
[2024-11-09 22:46:33]  workdir=None
[2024-11-09 22:46:33] ]
[2024-11-09 22:46:33] 2024-11-09 22:46:06,774 | INFO     | transferring file log.41843793._010121.job.log.tgz.1 from /home/pdw/Mo/1/slots/2/PanDA_Pilot-6397256202/log.41843793._010121.job.log.tgz.1 to /home/pdw/Mo/1/slots/
[2024-11-09 22:46:33] 2024-11-09 22:46:06,774 | INFO     | executing command: /usr/bin/env mv /home/pdw/Mo/1/slots/2/PanDA_Pilot-6397256202/log.41843793._010121.job.log.tgz.1 /home/pdw/Mo/1/slots/2/log.41843793._010121.job
[2024-11-09 22:46:33] 2024-11-09 22:46:06,790 | INFO     | adding to output.list: log.41843793._010121.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/04/cb/log.41843793._010121.job.log.tgz.
[2024-11-09 22:46:33] 2024-11-09 22:46:06,791 | INFO     | alt stage-out settings: ['pl', 'pw', 'w', 'default'], is_unified=False, altstageout=False, remain_files=0, has_altstorage=True
[2024-11-09 22:46:33] 2024-11-09 22:46:06,791 | INFO     | summary of transferred files:
[2024-11-09 22:46:33] 2024-11-09 22:46:06,791 | INFO     |  -- lfn=log.41843793._010121.job.log.tgz.1, status_code=0, status=transferred
[2024-11-09 22:46:33] 2024-11-09 22:46:06,791 | INFO     | stage-out finished correctly
[2024-11-09 22:46:33] 2024-11-09 22:46:08,707 | INFO     | monitor loop #441: job 0:6397256202 is in state 'finished'
[2024-11-09 22:46:33] 2024-11-09 22:46:08,707 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-11-09 22:46:33] 2024-11-09 22:46:09,800 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-11-09 22:46:33] 2024-11-09 22:46:10,772 | INFO     | job 6397256202 has state=finished
[2024-11-09 22:46:33] 2024-11-09 22:46:10,772 | INFO     | preparing for final server update for job 6397256202 in state='finished'
[2024-11-09 22:46:33] 2024-11-09 22:46:10,772 | INFO     | this job has now completed (state=finished)
[2024-11-09 22:46:33] 2024-11-09 22:46:10,772 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-11-09 22:46:33] 2024-11-09 22:46:10,772 | INFO     | log transfer has been attempted: DONE
[2024-11-09 22:46:33] 2024-11-09 22:46:10,772 | INFO     | job 6397256202 has finished - writing final server update
[2024-11-09 22:46:33] 2024-11-09 22:46:10,773 | INFO     | total number of processed events: 50 (read)
[2024-11-09 22:46:33] 2024-11-09 22:46:10,799 | INFO     | executing command: lscpu
[2024-11-09 22:46:33] 2024-11-09 22:46:10,859 | INFO     | found 32 cores (32 cores per socket, 1 sockets)
[2024-11-09 22:46:33] 2024-11-09 22:46:10,878 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-11-09 22:46:33] 2024-11-09 22:46:11,208 | INFO     | monitor loop #442: job 0:6397256202 is in state 'finished'
[2024-11-09 22:46:33] 2024-11-09 22:46:11,208 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-11-09 22:46:33] 2024-11-09 22:46:13,572 | INFO     | CPU arch script returned: x86-64-v3
[2024-11-09 22:46:33] 2024-11-09 22:46:13,572 | INFO     | using path: /home/pdw/Mo/1/slots/2/PanDA_Pilot-6397256202/memory_monitor_summary.json (trf name=prmon)
[2024-11-09 22:46:33] 2024-11-09 22:46:13,572 | INFO     | extracted standard info from prmon json
[2024-11-09 22:46:33] 2024-11-09 22:46:13,573 | INFO     | extracted standard memory fields from prmon json
[2024-11-09 22:46:33] 2024-11-09 22:46:13,573 | WARNING  | GPU info not found in prmon json: 'gpu'
[2024-11-09 22:46:33] 2024-11-09 22:46:13,574 | INFO     | fitting pss+swap vs Time
[2024-11-09 22:46:33] 2024-11-09 22:46:13,574 | INFO     | model: linear, x: [1731187018.0, 1731187079.0, 1731187140.0, 1731187201.0, 1731187262.0, 1731187323.0, 1731187384.0, 1731187445.0, 1731187506.0, 1731187567.0, 1731
[2024-11-09 22:46:33] 2024-11-09 22:46:13,574 | INFO     | sum of square deviations: 197203697.5
[2024-11-09 22:46:33] 2024-11-09 22:46:13,575 | INFO     | sum of deviations: 31883518582.5
[2024-11-09 22:46:33] 2024-11-09 22:46:13,575 | INFO     | mean x: 1731189610.5
[2024-11-09 22:46:33] 2024-11-09 22:46:13,575 | INFO     | mean y: 1678539.8255813953
[2024-11-09 22:46:33] 2024-11-09 22:46:13,575 | INFO     | -- intersect: -279893763665.094
[2024-11-09 22:46:33] 2024-11-09 22:46:13,575 | INFO     | intersect: -279893763665.094
[2024-11-09 22:46:33] 2024-11-09 22:46:13,575 | INFO     | chi2: 4.8592221063190415
[2024-11-09 22:46:33] 2024-11-09 22:46:13,575 | INFO     | -- intersect: -279893763665.094
[2024-11-09 22:46:33] 2024-11-09 22:46:13,575 | INFO     | current memory leak: 161.68 B/s (using 86 data points, chi2=4.86)
[2024-11-09 22:46:33] 2024-11-09 22:46:13,575 | INFO     | ..............................
[2024-11-09 22:46:33] 2024-11-09 22:46:13,575 | INFO     | . Timing measurements:
[2024-11-09 22:46:33] 2024-11-09 22:46:13,575 | INFO     | . get job = 0 s
[2024-11-09 22:46:33] 2024-11-09 22:46:13,575 | INFO     | . initial setup = 1 s
[2024-11-09 22:46:33] 2024-11-09 22:46:13,575 | INFO     | . payload setup = 5 s
[2024-11-09 22:46:33] 2024-11-09 22:46:13,576 | INFO     | . stage-in = 0 s
[2024-11-09 22:46:33] 2024-11-09 22:46:13,576 | INFO     | . payload execution = 5652 s
[2024-11-09 22:46:33] 2024-11-09 22:46:13,576 | INFO     | . stage-out = 0 s
[2024-11-09 22:46:33] 2024-11-09 22:46:13,576 | INFO     | . log creation = 0 s
[2024-11-09 22:46:33] 2024-11-09 22:46:13,576 | INFO     | ..............................
[2024-11-09 22:46:33] 2024-11-09 22:46:13,634 | INFO     | 
[2024-11-09 22:46:33] 2024-11-09 22:46:13,634 | INFO     | job summary report
[2024-11-09 22:46:33] 2024-11-09 22:46:13,634 | INFO     | --------------------------------------------------
[2024-11-09 22:46:33] 2024-11-09 22:46:13,634 | INFO     | PanDA job id: 6397256202
[2024-11-09 22:46:33] 2024-11-09 22:46:13,634 | INFO     | task id: 41843793
[2024-11-09 22:46:33] 2024-11-09 22:46:13,634 | INFO     | errors: (none)
[2024-11-09 22:46:33] 2024-11-09 22:46:13,634 | INFO     | status: LOG_TRANSFER = DONE 
[2024-11-09 22:46:33] 2024-11-09 22:46:13,634 | INFO     | pilot state: finished 
[2024-11-09 22:46:33] 2024-11-09 22:46:13,634 | INFO     | transexitcode: 0
[2024-11-09 22:46:33] 2024-11-09 22:46:13,634 | INFO     | exeerrorcode: 0
[2024-11-09 22:46:33] 2024-11-09 22:46:13,634 | INFO     | exeerrordiag: 
[2024-11-09 22:46:33] 2024-11-09 22:46:13,634 | INFO     | exitcode: 0
[2024-11-09 22:46:33] 2024-11-09 22:46:13,634 | INFO     | exitmsg: OK
[2024-11-09 22:46:33] 2024-11-09 22:46:13,634 | INFO     | cpuconsumptiontime: 7177 s
[2024-11-09 22:46:33] 2024-11-09 22:46:13,634 | INFO     | nevents: 50
[2024-11-09 22:46:33] 2024-11-09 22:46:13,634 | INFO     | neventsw: 0
[2024-11-09 22:46:33] 2024-11-09 22:46:13,635 | INFO     | pid: 255739
[2024-11-09 22:46:33] 2024-11-09 22:46:13,635 | INFO     | pgrp: 255739
[2024-11-09 22:46:33] 2024-11-09 22:46:13,635 | INFO     | corecount: 2
[2024-11-09 22:46:33] 2024-11-09 22:46:13,635 | INFO     | event service: False
[2024-11-09 22:46:33] 2024-11-09 22:46:13,635 | INFO     | sizes: {0: 2404959, 3: 2405165, 11: 2405193, 5661: 2432469, 5662: 2441489, 5665: 2441545, 5669: 2441895}
[2024-11-09 22:46:33] 2024-11-09 22:46:13,635 | INFO     | --------------------------------------------------
[2024-11-09 22:46:33] 2024-11-09 22:46:13,635 | INFO     | 
[2024-11-09 22:46:33] 2024-11-09 22:46:13,635 | INFO     | executing command: ls -lF /home/pdw/Mo/1/slots/2
[2024-11-09 22:46:33] 2024-11-09 22:46:13,654 | INFO     | queue jobs had 0 job(s) [purged]
[2024-11-09 22:46:33] 2024-11-09 22:46:13,654 | INFO     | queue payloads had 0 job(s) [purged]
[2024-11-09 22:46:33] 2024-11-09 22:46:13,654 | INFO     | queue data_in had 0 job(s) [purged]
[2024-11-09 22:46:33] 2024-11-09 22:46:13,654 | INFO     | queue data_out had 0 job(s) [purged]
[2024-11-09 22:46:33] 2024-11-09 22:46:13,654 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-11-09 22:46:33] 2024-11-09 22:46:13,654 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-11-09 22:46:33] 2024-11-09 22:46:13,654 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-11-09 22:46:33] 2024-11-09 22:46:13,654 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-11-09 22:46:33] 2024-11-09 22:46:13,655 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-11-09 22:46:33] 2024-11-09 22:46:13,655 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-11-09 22:46:33] 2024-11-09 22:46:13,655 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-11-09 22:46:33] 2024-11-09 22:46:13,655 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-11-09 22:46:33] 2024-11-09 22:46:13,655 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-11-09 22:46:33] 2024-11-09 22:46:13,655 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-11-09 22:46:33] 2024-11-09 22:46:13,655 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-11-09 22:46:33] 2024-11-09 22:46:13,655 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-11-09 22:46:33] 2024-11-09 22:46:13,655 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-11-09 22:46:33] 2024-11-09 22:46:13,655 | INFO     | queue completed_jobids has 1 job(s)
[2024-11-09 22:46:33] 2024-11-09 22:46:13,655 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-11-09 22:46:33] 2024-11-09 22:46:13,655 | INFO     | queue messages had 0 job(s) [purged]
[2024-11-09 22:46:33] 2024-11-09 22:46:13,655 | INFO     | job 6397256202 has completed (purged errors)
[2024-11-09 22:46:33] 2024-11-09 22:46:13,656 | INFO     | overall cleanup function is called
[2024-11-09 22:46:33] 2024-11-09 22:46:14,665 | INFO     | --- collectZombieJob: --- 10, [255739]
[2024-11-09 22:46:33] 2024-11-09 22:46:14,666 | INFO     | zombie collector waiting for pid 255739
[2024-11-09 22:46:33] 2024-11-09 22:46:14,666 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-11-09 22:46:33] 2024-11-09 22:46:14,666 | INFO     | collected zombie processes
[2024-11-09 22:46:33] 2024-11-09 22:46:14,666 | INFO     | will attempt to kill all subprocesses of pid=255739
[2024-11-09 22:46:33] 2024-11-09 22:46:14,755 | INFO     | process IDs to be killed: [255739] (in reverse order)
[2024-11-09 22:46:33] 2024-11-09 22:46:14,859 | WARNING  | found no corresponding commands to process id(s)
[2024-11-09 22:46:33] 2024-11-09 22:46:14,859 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-11-09 22:46:33] 2024-11-09 22:46:14,865 | INFO     | did not find any defunct processes belonging to 255739
[2024-11-09 22:46:33] 2024-11-09 22:46:14,870 | INFO     | did not find any defunct processes belonging to 255739
[2024-11-09 22:46:33] 2024-11-09 22:46:14,870 | INFO     | ready for new job
[2024-11-09 22:46:33] 2024-11-09 22:46:14,870 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-11-09 22:46:33] 2024-11-09 22:46:14,871 | INFO     | **************************************
[2024-11-09 22:46:33] 2024-11-09 22:46:14,871 | INFO     | ***  PanDA Pilot version 3.9.1.13  ***
[2024-11-09 22:46:33] 2024-11-09 22:46:14,871 | INFO     | **************************************
[2024-11-09 22:46:33] 2024-11-09 22:46:14,871 | INFO     | 
[2024-11-09 22:46:33] 2024-11-09 22:46:14,898 | INFO     | architecture information:
[2024-11-09 22:46:33] 2024-11-09 22:46:14,904 | INFO     | executing command: cat /etc/os-release
[2024-11-09 22:46:33] 2024-11-09 22:46:14,916 | INFO     | cat /etc/os-release:
[2024-11-09 22:46:33] NAME="CentOS Linux"
[2024-11-09 22:46:33] VERSION="7 (Core)"
[2024-11-09 22:46:33] ID="centos"
[2024-11-09 22:46:33] ID_LIKE="rhel fedora"
[2024-11-09 22:46:33] VERSION_ID="7"
[2024-11-09 22:46:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-11-09 22:46:33] ANSI_COLOR="0;31"
[2024-11-09 22:46:33] CPE_NAME="cpe:/o:centos:centos:7"
[2024-11-09 22:46:33] HOME_URL="https://www.centos.org/"
[2024-11-09 22:46:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-11-09 22:46:33] 
[2024-11-09 22:46:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-11-09 22:46:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-11-09 22:46:33] REDHAT_SUPPORT_PRODUCT="centos"
[2024-11-09 22:46:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-11-09 22:46:33] 
[2024-11-09 22:46:33] 2024-11-09 22:46:14,916 | INFO     | **************************************
[2024-11-09 22:46:33] 2024-11-09 22:46:15,419 | INFO     | executing command: df -mP /home/pdw/Mo/1/slots/2
[2024-11-09 22:46:33] 2024-11-09 22:46:15,436 | INFO     | sufficient remaining disk space (23837278208 B)
[2024-11-09 22:46:33] 2024-11-09 22:46:15,436 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-11-09 22:46:33] 2024-11-09 22:46:15,437 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-11-09 22:46:33] 2024-11-09 22:46:15,437 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-11-09 22:46:33] 2024-11-09 22:46:15,437 | INFO     | aborting loop
[2024-11-09 22:46:33] 2024-11-09 22:46:15,437 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-11-09 22:46:33] 2024-11-09 22:46:15,437 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-11-09 22:46:33] 2024-11-09 22:46:15,591 | INFO     | all job control threads have been joined
[2024-11-09 22:46:33] 2024-11-09 22:46:15,674 | INFO     | all data control threads have been joined
[2024-11-09 22:46:33] 2024-11-09 22:46:15,875 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-11-09 22:46:33] 2024-11-09 22:46:16,400 | INFO     | found 0 job(s) in 20 queues
[2024-11-09 22:46:33] 2024-11-09 22:46:16,400 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-11-09 22:46:33] 2024-11-09 22:46:16,400 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-11-09 22:46:33] 2024-11-09 22:46:16,437 | INFO     | [job] job monitor thread has finished
[2024-11-09 22:46:33] 2024-11-09 22:46:16,440 | INFO     | [job] queue monitor thread has finished
[2024-11-09 22:46:33] 2024-11-09 22:46:16,442 | INFO     | [job] retrieve thread has finished
[2024-11-09 22:46:33] 2024-11-09 22:46:16,483 | INFO     | all payload control threads have been joined
[2024-11-09 22:46:33] 2024-11-09 22:46:16,596 | INFO     | [job] control thread has finished
[2024-11-09 22:46:33] 2024-11-09 22:46:16,676 | INFO     | [data] control thread has finished
[2024-11-09 22:46:33] 2024-11-09 22:46:16,828 | INFO     | [payload] execute_payloads thread has finished
[2024-11-09 22:46:33] 2024-11-09 22:46:17,164 | INFO     | [job] validate thread has finished
[2024-11-09 22:46:33] 2024-11-09 22:46:17,312 | INFO     | [data] copytool_in thread has finished
[2024-11-09 22:46:33] 2024-11-09 22:46:17,328 | INFO     | [job] create_data_payload thread has finished
[2024-11-09 22:46:33] 2024-11-09 22:46:17,332 | INFO     | [payload] validate_pre thread has finished
[2024-11-09 22:46:33] 2024-11-09 22:46:17,388 | INFO     | [payload] failed_post thread has finished
[2024-11-09 22:46:33] 2024-11-09 22:46:17,440 | INFO     | [data] copytool_out thread has finished
[2024-11-09 22:46:33] 2024-11-09 22:46:17,488 | INFO     | [payload] control thread has finished
[2024-11-09 22:46:33] 2024-11-09 22:46:17,944 | INFO     | [payload] validate_post thread has finished
[2024-11-09 22:46:33] 2024-11-09 22:46:19,880 | INFO     | [data] queue_monitor thread has finished
[2024-11-09 22:46:33] 2024-11-09 22:46:25,700 | INFO     | job.realtimelogging is not enabled
[2024-11-09 22:46:33] 2024-11-09 22:46:26,704 | INFO     | [payload] run_realtimelog thread has finished
[2024-11-09 22:46:33] 2024-11-09 22:46:27,840 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140285530150720)>', '<ExcThread(monitor, started 140285099108096)>']
[2024-11-09 22:46:33] 2024-11-09 22:46:28,447 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-11-09 22:46:33] 2024-11-09 22:46:28,448 | INFO     | [monitor] control thread has ended
[2024-11-09 22:46:33] 2024-11-09 22:46:32,864 | INFO     | all workflow threads have been joined
[2024-11-09 22:46:33] 2024-11-09 22:46:32,865 | INFO     | end of generic workflow (traces error code: 0)
[2024-11-09 22:46:33] 2024-11-09 22:46:32,865 | INFO     | traces error code: 0
[2024-11-09 22:46:33] 2024-11-09 22:46:32,865 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-11-09 22:46:33] 2024-11-09 22:46:32,939 [wrapper] ==== pilot stdout END ====
[2024-11-09 22:46:33] 2024-11-09 22:46:32,945 [wrapper] ==== wrapper stdout RESUME ====
[2024-11-09 22:46:33] 2024-11-09 22:46:32,947 [wrapper] pilotpid: 248870
[2024-11-09 22:46:33] 2024-11-09 22:46:32,948 [wrapper] Pilot exit status: 0
[2024-11-09 22:46:33] 2024-11-09 22:46:32,956 [wrapper] pandaids: 6397256202
[2024-11-09 22:46:33] 2024-11-09 22:46:32,998 [wrapper] cleanup supervisor_pilot  325895 248871
[2024-11-09 22:46:33] 2024-11-09 22:46:33,000 [wrapper] Test setup, not cleaning
[2024-11-09 22:46:33] 2024-11-09 22:46:33,001 [wrapper] ==== wrapper stdout END ====
[2024-11-09 22:46:33] 2024-11-09 22:46:33,003 [wrapper] ==== wrapper stderr END ====
[2024-11-09 22:46:33] 2024-11-09 22:46:33,007 [wrapper] apfmon messages muted
[2024-11-09 22:46:33]  *** Error codes and diagnostics ***
[2024-11-09 22:46:33]     "exeErrorCode": 0,
[2024-11-09 22:46:33]     "exeErrorDiag": "",
[2024-11-09 22:46:33]     "pilotErrorCode": 0,
[2024-11-09 22:46:33]     "pilotErrorDiag": "",
[2024-11-09 22:46:33]  *** Listing of results directory ***
[2024-11-09 22:46:33] total 416256
[2024-11-09 22:46:33] -rw-r--r-- 1 root root    486088 Nov  9 20:59 pilot3.tar.gz
[2024-11-09 22:46:33] -rw-r--r-- 1 root root      5652 Nov  9 21:03 queuedata.json
[2024-11-09 22:46:33] -rwx------ 1 4871 1028     34589 Nov  9 21:04 runpilot2-wrapper.sh
[2024-11-09 22:46:33] -rw-r--r-- 1 root root       100 Nov  9 21:11 wrapper_26015_x86_64-pc-linux-gnu
[2024-11-09 22:46:33] -rwxr-xr-x 1 root root      7986 Nov  9 21:11 run_atlas
[2024-11-09 22:46:33] -rw-r--r-- 1 root root       105 Nov  9 21:11 job.xml
[2024-11-09 22:46:33] -rw-r--r-- 1 root root      9515 Nov  9 21:11 init_data.xml
[2024-11-09 22:46:33] -rw-r--r-- 2 root root 372778978 Nov  9 21:11 EVNT.41779818._000008.pool.root.1
[2024-11-09 22:46:33] -rw-r--r-- 2 root root     17569 Nov  9 21:11 start_atlas.sh
[2024-11-09 22:46:33] drwxrwx--x 2 root root      4096 Nov  9 21:11 shared
[2024-11-09 22:46:33] -rw-r--r-- 2 root root    499920 Nov  9 21:11 input.tar.gz
[2024-11-09 22:46:33] -rw-r--r-- 1 root root         0 Nov  9 21:11 boinc_lockfile
[2024-11-09 22:46:33] -rw-r--r-- 1 root root      2888 Nov  9 21:11 pandaJob.out
[2024-11-09 22:46:33] -rw------- 1 root root       424 Nov  9 21:11 setup.sh.local
[2024-11-09 22:46:33] -rw------- 1 root root   1010863 Nov  9 21:11 agis_schedconf.cvmfs.json
[2024-11-09 22:46:33] -rw------- 1 root root   1597102 Nov  9 21:11 agis_ddmendpoints.agis.ALL.json
[2024-11-09 22:46:33] drwxr-xr-x 4  320  320      4096 Nov  9 21:11 pilot3
[2024-11-09 22:46:33] -rw-r--r-- 1 root root       528 Nov  9 22:38 boinc_task_state.xml
[2024-11-09 22:46:33] -rw------- 1 root root        95 Nov  9 22:45 pilot_heartbeat.json
[2024-11-09 22:46:33] -rw------- 1 root root  47425136 Nov  9 22:45 HITS.41843793._010121.pool.root.1
[2024-11-09 22:46:33] -rw------- 1 root root      1026 Nov  9 22:46 memory_monitor_summary.json
[2024-11-09 22:46:33] -rw------- 1 root root    550826 Nov  9 22:46 log.41843793._010121.job.log.tgz.1
[2024-11-09 22:46:33] -rw------- 1 root root      8485 Nov  9 22:46 heartbeat.json
[2024-11-09 22:46:33] -rw-r--r-- 1 root root      8192 Nov  9 22:46 boinc_mmap_file
[2024-11-09 22:46:33] -rw-r--r-- 1 root root        26 Nov  9 22:46 wrapper_checkpoint.txt
[2024-11-09 22:46:33] -rw------- 1 root root      4287 Nov  9 22:46 pilotlog.txt
[2024-11-09 22:46:33] -rw------- 1 root root    545080 Nov  9 22:46 log.41843793._010121.job.log.1
[2024-11-09 22:46:33] -rw------- 1 root root       353 Nov  9 22:46 output.list
[2024-11-09 22:46:33] -rw-r--r-- 1 root root       620 Nov  9 22:46 runtime_log
[2024-11-09 22:46:33] -rw------- 1 root root   1116160 Nov  9 22:46 result.tar.gz
[2024-11-09 22:46:33] -rw-r--r-- 1 root root     10937 Nov  9 22:46 runtime_log.err
[2024-11-09 22:46:33] -rw------- 1 root root       634 Nov  9 22:46 5vfKDmFo7T6nsSi4ap6QjLDmwznN0nGgGQJmDC4LDmNEhNDm8m0NYo.diag
[2024-11-09 22:46:33] -rw-r--r-- 1 root root     21160 Nov  9 22:46 stderr.txt
[2024-11-09 22:46:33] HITS file was successfully produced:
[2024-11-09 22:46:33] -rw------- 1 root root 47425136 Nov  9 22:45 shared/HITS.pool.root.1
[2024-11-09 22:46:33]  *** Contents of shared directory: ***
[2024-11-09 22:46:33] total 411972
[2024-11-09 22:46:33] -rw-r--r-- 2 root root 372778978 Nov  9 21:11 ATLAS.root_0
[2024-11-09 22:46:33] -rw-r--r-- 2 root root     17569 Nov  9 21:11 start_atlas.sh
[2024-11-09 22:46:33] -rw-r--r-- 2 root root    499920 Nov  9 21:11 input.tar.gz
[2024-11-09 22:46:33] -rw------- 1 root root  47425136 Nov  9 22:45 HITS.pool.root.1
[2024-11-09 22:46:33] -rw------- 1 root root   1116160 Nov  9 22:46 result.tar.gz
22:46:34 (244978): run_atlas exited; CPU time 7099.244871
22:46:34 (244978): called boinc_finish(0)

</stderr_txt>
]]>

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