Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
2024-11-08 18:12:12 (2319129): Detected: vboxwrapper 26206
2024-11-08 18:12:12 (2319129): Detected: BOINC client v8.0.4
2024-11-08 18:12:12 (2319129): Detected: VirtualBox VboxManage Interface (Version: 7.1.4)
2024-11-08 18:12:12 (2319129): Successfully copied 'init_data.xml' to the shared directory.
2024-11-08 18:12:12 (2319129): Create VM. (boinc_01b0354ab55fdd48, slot#0)
2024-11-08 18:12:12 (2319129): Setting Memory Size for VM. (4600MB)
2024-11-08 18:12:12 (2319129): Setting CPU Count for VM. (6)
2024-11-08 18:12:12 (2319129): Setting Chipset Options for VM.
2024-11-08 18:12:12 (2319129): Setting Graphics Controller Options for VM.
2024-11-08 18:12:13 (2319129): Setting Boot Options for VM.
2024-11-08 18:12:13 (2319129): Setting Network Configuration for NAT.
2024-11-08 18:12:13 (2319129): Enabling VM Network Access.
2024-11-08 18:12:13 (2319129): Disabling USB Support for VM.
2024-11-08 18:12:13 (2319129): Disabling COM Port Support for VM.
2024-11-08 18:12:13 (2319129): Disabling LPT Port Support for VM.
2024-11-08 18:12:13 (2319129): Disabling Audio Support for VM.
2024-11-08 18:12:14 (2319129): Disabling Clipboard Support for VM.
2024-11-08 18:12:14 (2319129): Disabling Drag and Drop Support for VM.
2024-11-08 18:12:14 (2319129): Adding storage controller(s) to VM.
2024-11-08 18:12:14 (2319129): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2024-11-08 18:12:16 (2319129): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2024-11-08 18:12:16 (2319129): forwarding host port 59395 to guest port 80
2024-11-08 18:12:16 (2319129): Enabling remote desktop for VM.
2024-11-08 18:12:16 (2319129): Required extension pack not installed, remote desktop not enabled.
2024-11-08 18:12:16 (2319129): Enabling shared directory for VM.
2024-11-08 18:12:16 (2319129): Starting VM using VBoxManage interface. (boinc_01b0354ab55fdd48, slot#0)
2024-11-08 18:12:18 (2319129): Successfully started VM. (PID = '2319417')
2024-11-08 18:12:18 (2319129): Reporting VM Process ID to BOINC.
2024-11-08 18:12:18 (2319129): Guest Log: BIOS: VirtualBox 7.1.4
2024-11-08 18:12:18 (2319129): Guest Log: CPUID EDX: 0x178bfbff
2024-11-08 18:12:18 (2319129): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2024-11-08 18:12:18 (2319129): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2024-11-08 18:12:18 (2319129): VM state change detected. (old = 'poweredoff', new = 'running')
2024-11-08 18:12:18 (2319129): Detected: Web Application Enabled (http://localhost:59395)
2024-11-08 18:12:18 (2319129): Preference change detected
2024-11-08 18:12:18 (2319129): Setting CPU throttle for VM. (50%)
2024-11-08 18:12:18 (2319129): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2024-11-08 18:12:20 (2319129): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2024-11-08 18:12:20 (2319129): Guest Log: BIOS: Booting from Hard Disk...
2024-11-08 18:12:26 (2319129): Guest Log: BIOS: KBD: unsupported int 16h function 03
2024-11-08 18:12:26 (2319129): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2024-11-08 18:12:26 (2319129): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2024-11-08 18:12:26 (2319129): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2024-11-08 18:12:26 (2319129): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2024-11-08 18:12:26 (2319129): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2024-11-08 18:12:27 (2319129): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2024-11-08 18:12:27 (2319129): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2024-11-08 18:12:27 (2319129): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2024-11-08 18:12:27 (2319129): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2024-11-08 18:12:27 (2319129): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2024-11-08 18:12:27 (2319129): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2024-11-08 18:12:27 (2319129): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2024-11-08 18:12:27 (2319129): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2024-11-08 18:12:27 (2319129): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2024-11-08 18:12:27 (2319129): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2024-11-08 18:12:27 (2319129): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2024-11-08 18:12:27 (2319129): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2024-11-08 18:12:27 (2319129): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2024-11-08 18:12:27 (2319129): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2024-11-08 18:12:27 (2319129): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2024-11-08 18:12:27 (2319129): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2024-11-08 18:12:27 (2319129): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2024-11-08 18:12:27 (2319129): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2024-11-08 18:12:27 (2319129): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2024-11-08 18:12:27 (2319129): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2024-11-08 18:12:27 (2319129): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2024-11-08 18:12:27 (2319129): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2024-11-08 18:12:27 (2319129): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2024-11-08 18:12:27 (2319129): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2024-11-08 18:12:27 (2319129): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2024-11-08 18:12:27 (2319129): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2024-11-08 18:12:42 (2319129): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2024-11-08 18:12:42 (2319129): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2024-11-08 18:13:00 (2319129): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2024-11-08 18:13:00 (2319129): Guest Log: 00:00:00.000211 main     Log opened 2024-11-08T17:12:58.917366000Z
2024-11-08 18:13:00 (2319129): Guest Log: 00:00:00.000338 main     OS Product: Linux
2024-11-08 18:13:00 (2319129): Guest Log: 00:00:00.000377 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2024-11-08 18:13:00 (2319129): Guest Log: 00:00:00.000407 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2024-11-08 18:13:00 (2319129): Guest Log: 00:00:00.000437 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2024-11-08 18:13:00 (2319129): Guest Log: 00:00:00.000439 main     Process ID: 1343
2024-11-08 18:13:00 (2319129): Guest Log: 00:00:00.000439 main     Package type: LINUX_64BITS_GENERIC
2024-11-08 18:13:00 (2319129): Guest Log: 00:00:00.002602 main     5.2.32 r132073 started. Verbose level = 0
2024-11-08 18:13:00 (2319129): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2024-11-08 18:13:00 (2319129): Guest Log: [INFO] Mounting shared directory
2024-11-08 18:13:01 (2319129): Guest Log: [INFO] Checking for init_data.xml
2024-11-08 18:13:04 (2319129): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2024-11-08 18:13:04 (2319129): Guest Log: [INFO] Detected branch: prod
2024-11-08 18:13:04 (2319129): Guest Log: This is the prod version of the ATLAS job wrapper
2024-11-08 18:13:04 (2319129): Guest Log: Copying input files
2024-11-08 18:13:07 (2319129): Guest Log: Copied input files into RunAtlas.
2024-11-08 18:13:07 (2319129): Guest Log: This VM did not configure a local http proxy via BOINC.
2024-11-08 18:13:07 (2319129): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2024-11-08 18:13:07 (2319129): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2024-11-08 18:13:07 (2319129): Guest Log: Further information can be found at the LHC@home message board.
2024-11-08 18:13:18 (2319129): Guest Log: Running cvmfs_config stat atlas.cern.ch
2024-11-08 18:13:18 (2319129): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2024-11-08 18:13:18 (2319129): Guest Log: 2.6.3.0 1638 0 30244 139248 4 1 3117281 4096000 0 65024 0 0 n/a 1 1 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
2024-11-08 18:13:21 (2319129): Guest Log: copied the webapp to /var/www
2024-11-08 18:13:21 (2319129): Guest Log: ATHENA_PROC_NUMBER=6
2024-11-08 18:13:21 (2319129): Guest Log: ATHENA_CORE_NUMBER=6
2024-11-08 18:13:22 (2319129): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2024-11-08 18:13:22 (2319129): Guest Log:  *** Starting ATLAS job. (PandaID=6395482422 taskID=41944689) ***
2024-11-08 19:51:18 (2319129): Status Report: Elapsed Time: '6000.000000'
2024-11-08 19:51:18 (2319129): Status Report: CPU Time: '15708.890000'
2024-11-08 21:30:19 (2319129): Status Report: Elapsed Time: '12000.000000'
2024-11-08 21:30:19 (2319129): Status Report: CPU Time: '34502.850000'
2024-11-08 21:52:22 (2319129): Guest Log:  *** Job finished ***
2024-11-08 21:52:22 (2319129): Guest Log:  *** The last 20 lines of the pilot log: ***
2024-11-08 21:52:22 (2319129): Guest Log: 2024-11-08 20:52:08,396 | INFO     | [data] copytool_out thread has finished
2024-11-08 21:52:22 (2319129): Guest Log: 2024-11-08 20:52:08,539 | INFO     | [job] control thread has finished
2024-11-08 21:52:22 (2319129): Guest Log: 2024-11-08 20:52:10,633 | INFO     | [data] queue_monitor thread has finished
2024-11-08 21:52:22 (2319129): Guest Log: 2024-11-08 20:52:12,066 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139900456449856)>', '<ExcThread(monitor, started 139899860657920)>']
2024-11-08 21:52:22 (2319129): Guest Log: 2024-11-08 20:52:12,345 | WARNING  | job_aborted has been set - aborting pilot monitoring
2024-11-08 21:52:22 (2319129): Guest Log: 2024-11-08 20:52:12,345 | INFO     | [monitor] control thread has ended
2024-11-08 21:52:22 (2319129): Guest Log: 2024-11-08 20:52:17,073 | INFO     | all workflow threads have been joined
2024-11-08 21:52:22 (2319129): Guest Log: 2024-11-08 20:52:17,074 | INFO     | end of generic workflow (traces error code: 0)
2024-11-08 21:52:22 (2319129): Guest Log: 2024-11-08 20:52:17,074 | INFO     | traces error code: 0
2024-11-08 21:52:22 (2319129): Guest Log: 2024-11-08 20:52:17,075 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2024-11-08 21:52:22 (2319129): Guest Log: 2024-11-08 20:52:17,969 [wrapper] ==== pilot stdout END ====
2024-11-08 21:52:22 (2319129): Guest Log: 2024-11-08 20:52:17,975 [wrapper] ==== wrapper stdout RESUME ====
2024-11-08 21:52:22 (2319129): Guest Log: 2024-11-08 20:52:17,981 [wrapper] pilotpid: 5987
2024-11-08 21:52:22 (2319129): Guest Log: 2024-11-08 20:52:17,987 [wrapper] Pilot exit status: 0
2024-11-08 21:52:22 (2319129): Guest Log: 2024-11-08 20:52:18,024 [wrapper] pandaids: 6395482422
2024-11-08 21:52:22 (2319129): Guest Log: 2024-11-08 20:52:18,077 [wrapper] cleanup supervisor_pilot 11523 5988
2024-11-08 21:52:22 (2319129): Guest Log: 2024-11-08 20:52:18,086 [wrapper] Test setup, not cleaning
2024-11-08 21:52:22 (2319129): Guest Log: 2024-11-08 20:52:18,095 [wrapper] ==== wrapper stdout END ====
2024-11-08 21:52:22 (2319129): Guest Log: 2024-11-08 20:52:18,103 [wrapper] ==== wrapper stderr END ====
2024-11-08 21:52:22 (2319129): Guest Log: 2024-11-08 20:52:18,119 [wrapper] apfmon messages muted
2024-11-08 21:52:22 (2319129): Guest Log:  *** Error codes and diagnostics ***
2024-11-08 21:52:22 (2319129): Guest Log:     "exeErrorCode": 0,
2024-11-08 21:52:22 (2319129): Guest Log:     "exeErrorDiag": "",
2024-11-08 21:52:22 (2319129): Guest Log:     "pilotErrorCode": 0,
2024-11-08 21:52:22 (2319129): Guest Log:     "pilotErrorDiag": "",
2024-11-08 21:52:22 (2319129): Guest Log:  *** Listing of results directory ***
2024-11-08 21:52:22 (2319129): Guest Log: total 205132
2024-11-08 21:52:22 (2319129): Guest Log: -rw-r--r--. 1 atlas atlas    486088 Nov  8 12:25 pilot3.tar.gz
2024-11-08 21:52:22 (2319129): Guest Log: -rw-r--r--. 1 atlas atlas      5652 Nov  8 12:33 queuedata.json
2024-11-08 21:52:22 (2319129): Guest Log: -rwx------. 1 atlas atlas     34589 Nov  8 12:34 runpilot2-wrapper.sh
2024-11-08 21:52:22 (2319129): Guest Log: -rw-r--r--. 1 atlas atlas      6648 Nov  8 17:13 init_data.xml
2024-11-08 21:52:22 (2319129): Guest Log: -rw-r--r--. 1 atlas atlas     17569 Nov  8 17:13 start_atlas.sh
2024-11-08 21:52:22 (2319129): Guest Log: -rw-r--r--. 1 atlas atlas    499787 Nov  8 17:13 input.tar.gz
2024-11-08 21:52:22 (2319129): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Nov  8 17:13 EVNT.41944686._000036.pool.root.1 -> /data/./ATLAS.root_0
2024-11-08 21:52:22 (2319129): Guest Log: -rw-r--r--. 1 atlas atlas      2627 Nov  8 17:13 pandaJob.out
2024-11-08 21:52:22 (2319129): Guest Log: -rw-------. 1 atlas atlas       424 Nov  8 17:13 setup.sh.local
2024-11-08 21:52:22 (2319129): Guest Log: -rw-------. 1 atlas atlas   1011227 Nov  8 17:13 agis_schedconf.cvmfs.json
2024-11-08 21:52:22 (2319129): Guest Log: drwx------. 4 atlas atlas      4096 Nov  8 17:13 pilot3
2024-11-08 21:52:22 (2319129): Guest Log: -rw-------. 1 atlas atlas 204240172 Nov  8 20:51 HITS.41944689._001730.pool.root.1
2024-11-08 21:52:22 (2319129): Guest Log: -rw-------. 1 atlas atlas        95 Nov  8 20:51 pilot_heartbeat.json
2024-11-08 21:52:22 (2319129): Guest Log: -rw-------. 1 atlas atlas      1034 Nov  8 20:51 memory_monitor_summary.json
2024-11-08 21:52:22 (2319129): Guest Log: -rw-------. 1 atlas atlas   1597102 Nov  8 20:51 agis_ddmendpoints.agis.ALL.json
2024-11-08 21:52:22 (2319129): Guest Log: -rw-------. 1 atlas atlas    305939 Nov  8 20:51 log.41944689._001730.job.log.tgz.1
2024-11-08 21:52:22 (2319129): Guest Log: -rw-------. 1 atlas atlas      7735 Nov  8 20:52 heartbeat.json
2024-11-08 21:52:22 (2319129): Guest Log: -rw-------. 1 atlas atlas      4275 Nov  8 20:52 pilotlog.txt
2024-11-08 21:52:22 (2319129): Guest Log: -rw-------. 1 atlas atlas    721036 Nov  8 20:52 log.41944689._001730.job.log.1
2024-11-08 21:52:22 (2319129): Guest Log: -rw-------. 1 atlas atlas       357 Nov  8 20:52 output.list
2024-11-08 21:52:22 (2319129): Guest Log: -rw-r--r--. 1 atlas atlas       620 Nov  8 20:52 runtime_log
2024-11-08 21:52:22 (2319129): Guest Log: -rw-------. 1 atlas atlas   1044480 Nov  8 20:52 result.tar.gz
2024-11-08 21:52:22 (2319129): Guest Log: -rw-r--r--. 1 atlas atlas     11028 Nov  8 20:52 runtime_log.err
2024-11-08 21:52:22 (2319129): Guest Log: -rw-------. 1 atlas atlas       689 Nov  8 20:52 05WLDmZNdT6nsSi4ap6QjLDmwznN0nGgGQJmDC4LDmA1ONDms3sW9m.diag
2024-11-08 21:52:22 (2319129): Guest Log: Looking for outputfile HITS.41944689._001730.pool.root.1
2024-11-08 21:52:22 (2319129): Guest Log: HITS file was successfully produced
2024-11-08 21:52:22 (2319129): Guest Log: -rw-------. 1 atlas atlas 204240172 Nov  8 20:51 /home/atlas/RunAtlas/HITS.41944689._001730.pool.root.1
2024-11-08 21:52:22 (2319129): Guest Log: Successfully finished the ATLAS job!
2024-11-08 21:52:22 (2319129): Guest Log: Copying the results back to the shared directory!
2024-11-08 21:52:22 (2319129): Guest Log:  *** Contents of shared directory: ***
2024-11-08 21:52:22 (2319129): Guest Log: total 265040
2024-11-08 21:52:22 (2319129): Guest Log: -rw-r--r--. 1 root root 269823677 Nov  8 17:12 ATLAS.root_0
2024-11-08 21:52:22 (2319129): Guest Log: -rw-r--r--. 1 root root      6648 Nov  8 17:12 init_data.xml
2024-11-08 21:52:22 (2319129): Guest Log: -rw-r--r--. 1 root root    499787 Nov  8 17:12 input.tar.gz
2024-11-08 21:52:22 (2319129): Guest Log: -rw-r--r--. 1 root root   1044480 Nov  8 20:52 result.tar.gz
2024-11-08 21:52:22 (2319129): Guest Log: -rw-r--r--. 1 root root     17569 Nov  8 17:12 start_atlas.sh
2024-11-08 21:52:22 (2319129): Guest Log:  *** Success! Shutting down the machine. ***
2024-11-08 21:52:22 (2319129): VM Completion File Detected.
2024-11-08 21:52:22 (2319129): Powering off VM.
2024-11-08 21:52:22 (2319129): Successfully stopped VM.
2024-11-08 21:52:22 (2319129): Deregistering VM. (boinc_01b0354ab55fdd48, slot#0)
2024-11-08 21:52:22 (2319129): Removing network bandwidth throttle group from VM.
2024-11-08 21:52:22 (2319129): Removing VM from VirtualBox.
21:52:28 (2319129): called boinc_finish(0)

</stderr_txt>
]]>

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