Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
2024-11-08 15:51:37 (831113): Detected: vboxwrapper 26206
2024-11-08 15:51:37 (831113): Detected: BOINC client v8.0.4
2024-11-08 15:51:37 (831113): Detected: VirtualBox VboxManage Interface (Version: 7.1.4)
2024-11-08 15:51:37 (831113): Successfully copied 'init_data.xml' to the shared directory.
2024-11-08 15:51:37 (831113): Create VM. (boinc_98c3c23939a0f6bd, slot#0)
2024-11-08 15:51:37 (831113): Setting Memory Size for VM. (4400MB)
2024-11-08 15:51:37 (831113): Setting CPU Count for VM. (4)
2024-11-08 15:51:37 (831113): Setting Chipset Options for VM.
2024-11-08 15:51:37 (831113): Setting Graphics Controller Options for VM.
2024-11-08 15:51:37 (831113): Setting Boot Options for VM.
2024-11-08 15:51:38 (831113): Setting Network Configuration for NAT.
2024-11-08 15:51:38 (831113): Enabling VM Network Access.
2024-11-08 15:51:38 (831113): Disabling USB Support for VM.
2024-11-08 15:51:38 (831113): Disabling COM Port Support for VM.
2024-11-08 15:51:38 (831113): Disabling LPT Port Support for VM.
2024-11-08 15:51:38 (831113): Disabling Audio Support for VM.
2024-11-08 15:51:38 (831113): Disabling Clipboard Support for VM.
2024-11-08 15:51:39 (831113): Disabling Drag and Drop Support for VM.
2024-11-08 15:51:39 (831113): Adding storage controller(s) to VM.
2024-11-08 15:51:39 (831113): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2024-11-08 15:51:40 (831113): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2024-11-08 15:51:41 (831113): forwarding host port 35277 to guest port 80
2024-11-08 15:51:41 (831113): Enabling remote desktop for VM.
2024-11-08 15:51:41 (831113): Required extension pack not installed, remote desktop not enabled.
2024-11-08 15:51:41 (831113): Enabling shared directory for VM.
2024-11-08 15:51:41 (831113): Starting VM using VBoxManage interface. (boinc_98c3c23939a0f6bd, slot#0)
2024-11-08 15:51:42 (831113): Successfully started VM. (PID = '831414')
2024-11-08 15:51:42 (831113): Reporting VM Process ID to BOINC.
2024-11-08 15:51:42 (831113): Guest Log: BIOS: VirtualBox 7.1.4
2024-11-08 15:51:42 (831113): Guest Log: CPUID EDX: 0x178bfbff
2024-11-08 15:51:42 (831113): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2024-11-08 15:51:42 (831113): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2024-11-08 15:51:42 (831113): VM state change detected. (old = 'poweredoff', new = 'running')
2024-11-08 15:51:42 (831113): Detected: Web Application Enabled (http://localhost:35277)
2024-11-08 15:51:42 (831113): Preference change detected
2024-11-08 15:51:42 (831113): Setting CPU throttle for VM. (50%)
2024-11-08 15:51:42 (831113): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2024-11-08 15:51:44 (831113): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2024-11-08 15:51:44 (831113): Guest Log: BIOS: Booting from Hard Disk...
2024-11-08 15:51:48 (831113): Guest Log: BIOS: KBD: unsupported int 16h function 03
2024-11-08 15:51:48 (831113): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2024-11-08 15:51:48 (831113): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2024-11-08 15:51:48 (831113): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2024-11-08 15:51:48 (831113): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2024-11-08 15:51:48 (831113): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2024-11-08 15:51:48 (831113): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2024-11-08 15:51:48 (831113): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2024-11-08 15:51:48 (831113): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2024-11-08 15:51:48 (831113): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2024-11-08 15:51:48 (831113): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2024-11-08 15:51:48 (831113): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2024-11-08 15:51:48 (831113): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2024-11-08 15:51:48 (831113): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2024-11-08 15:51:48 (831113): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2024-11-08 15:51:48 (831113): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2024-11-08 15:51:48 (831113): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2024-11-08 15:51:48 (831113): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2024-11-08 15:51:48 (831113): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2024-11-08 15:51:48 (831113): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2024-11-08 15:51:48 (831113): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2024-11-08 15:51:48 (831113): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2024-11-08 15:51:48 (831113): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2024-11-08 15:51:48 (831113): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2024-11-08 15:51:48 (831113): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2024-11-08 15:51:48 (831113): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2024-11-08 15:51:48 (831113): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2024-11-08 15:51:48 (831113): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2024-11-08 15:51:48 (831113): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2024-11-08 15:51:48 (831113): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2024-11-08 15:51:48 (831113): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2024-11-08 15:51:48 (831113): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2024-11-08 15:51:59 (831113): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2024-11-08 15:51:59 (831113): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2024-11-08 15:52:16 (831113): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2024-11-08 15:52:16 (831113): Guest Log: 00:00:00.000192 main     Log opened 2024-11-08T14:52:14.530545000Z
2024-11-08 15:52:16 (831113): Guest Log: 00:00:00.000310 main     OS Product: Linux
2024-11-08 15:52:16 (831113): Guest Log: 00:00:00.000346 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2024-11-08 15:52:16 (831113): Guest Log: 00:00:00.000369 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2024-11-08 15:52:16 (831113): Guest Log: 00:00:00.000391 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2024-11-08 15:52:16 (831113): Guest Log: 00:00:00.000392 main     Process ID: 1302
2024-11-08 15:52:16 (831113): Guest Log: 00:00:00.000392 main     Package type: LINUX_64BITS_GENERIC
2024-11-08 15:52:16 (831113): Guest Log: 00:00:00.002290 main     5.2.32 r132073 started. Verbose level = 0
2024-11-08 15:52:17 (831113): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2024-11-08 15:52:17 (831113): Guest Log: [INFO] Mounting shared directory
2024-11-08 15:52:17 (831113): Guest Log: [INFO] Checking for init_data.xml
2024-11-08 15:52:22 (831113): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2024-11-08 15:52:22 (831113): Guest Log: [INFO] Detected branch: prod
2024-11-08 15:52:22 (831113): Guest Log: This is the prod version of the ATLAS job wrapper
2024-11-08 15:52:22 (831113): Guest Log: Copying input files
2024-11-08 15:52:25 (831113): Guest Log: Copied input files into RunAtlas.
2024-11-08 15:52:25 (831113): Guest Log: This VM did not configure a local http proxy via BOINC.
2024-11-08 15:52:25 (831113): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2024-11-08 15:52:25 (831113): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2024-11-08 15:52:25 (831113): Guest Log: Further information can be found at the LHC@home message board.
2024-11-08 15:52:33 (831113): Guest Log: Running cvmfs_config stat atlas.cern.ch
2024-11-08 15:52:33 (831113): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2024-11-08 15:52:33 (831113): Guest Log: 2.6.3.0 1578 0 32220 139243 4 1 3117281 4096000 0 65024 0 0 n/a 1 4 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
2024-11-08 15:52:37 (831113): Guest Log: copied the webapp to /var/www
2024-11-08 15:52:37 (831113): Guest Log: ATHENA_PROC_NUMBER=4
2024-11-08 15:52:37 (831113): Guest Log: ATHENA_CORE_NUMBER=4
2024-11-08 15:52:37 (831113): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2024-11-08 15:52:37 (831113): Guest Log:  *** Starting ATLAS job. (PandaID=6395457918 taskID=41944320) ***
2024-11-08 17:30:43 (831113): Status Report: Elapsed Time: '6000.000000'
2024-11-08 17:30:43 (831113): Status Report: CPU Time: '10651.030000'
2024-11-08 18:38:57 (831113): Guest Log:  *** Job finished ***
2024-11-08 18:38:57 (831113): Guest Log:  *** The last 20 lines of the pilot log: ***
2024-11-08 18:38:57 (831113): Guest Log: 2024-11-08 17:38:42,008 | INFO     | [data] queue_monitor thread has finished
2024-11-08 18:38:57 (831113): Guest Log: 2024-11-08 17:38:47,576 | INFO     | job.realtimelogging is not enabled
2024-11-08 18:38:57 (831113): Guest Log: 2024-11-08 17:38:48,579 | INFO     | [payload] run_realtimelog thread has finished
2024-11-08 18:38:57 (831113): Guest Log: 2024-11-08 17:38:50,670 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140006640719680)>', '<ExcThread(monitor, started 140005892663040)>']
2024-11-08 18:38:57 (831113): Guest Log: 2024-11-08 17:38:51,092 | WARNING  | job_aborted has been set - aborting pilot monitoring
2024-11-08 18:38:57 (831113): Guest Log: 2024-11-08 17:38:51,092 | INFO     | [monitor] control thread has ended
2024-11-08 18:38:57 (831113): Guest Log: 2024-11-08 17:38:55,676 | INFO     | all workflow threads have been joined
2024-11-08 18:38:57 (831113): Guest Log: 2024-11-08 17:38:55,677 | INFO     | end of generic workflow (traces error code: 0)
2024-11-08 18:38:57 (831113): Guest Log: 2024-11-08 17:38:55,677 | INFO     | traces error code: 0
2024-11-08 18:38:57 (831113): Guest Log: 2024-11-08 17:38:55,678 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2024-11-08 18:38:57 (831113): Guest Log: 2024-11-08 17:38:55,839 [wrapper] ==== pilot stdout END ====
2024-11-08 18:38:57 (831113): Guest Log: 2024-11-08 17:38:55,859 [wrapper] ==== wrapper stdout RESUME ====
2024-11-08 18:38:57 (831113): Guest Log: 2024-11-08 17:38:55,877 [wrapper] pilotpid: 5927
2024-11-08 18:38:57 (831113): Guest Log: 2024-11-08 17:38:55,896 [wrapper] Pilot exit status: 0
2024-11-08 18:38:57 (831113): Guest Log: 2024-11-08 17:38:55,995 [wrapper] pandaids: 6395457918
2024-11-08 18:38:57 (831113): Guest Log: 2024-11-08 17:38:56,094 [wrapper] cleanup supervisor_pilot 10146 5928
2024-11-08 18:38:57 (831113): Guest Log: 2024-11-08 17:38:56,099 [wrapper] Test setup, not cleaning
2024-11-08 18:38:57 (831113): Guest Log: 2024-11-08 17:38:56,121 [wrapper] ==== wrapper stdout END ====
2024-11-08 18:38:57 (831113): Guest Log: 2024-11-08 17:38:56,141 [wrapper] ==== wrapper stderr END ====
2024-11-08 18:38:57 (831113): Guest Log: 2024-11-08 17:38:56,185 [wrapper] apfmon messages muted
2024-11-08 18:38:57 (831113): Guest Log:  *** Error codes and diagnostics ***
2024-11-08 18:38:57 (831113): Guest Log:     "exeErrorCode": 0,
2024-11-08 18:38:57 (831113): Guest Log:     "exeErrorDiag": "",
2024-11-08 18:38:57 (831113): Guest Log:     "pilotErrorCode": 0,
2024-11-08 18:38:57 (831113): Guest Log:     "pilotErrorDiag": "",
2024-11-08 18:38:57 (831113): Guest Log:  *** Listing of results directory ***
2024-11-08 18:38:57 (831113): Guest Log: total 222280
2024-11-08 18:38:57 (831113): Guest Log: -rw-r--r--. 1 atlas atlas    486088 Nov  8 10:22 pilot3.tar.gz
2024-11-08 18:38:57 (831113): Guest Log: -rw-r--r--. 1 atlas atlas      5652 Nov  8 10:34 queuedata.json
2024-11-08 18:38:57 (831113): Guest Log: -rwx------. 1 atlas atlas     34589 Nov  8 10:35 runpilot2-wrapper.sh
2024-11-08 18:38:57 (831113): Guest Log: -rw-r--r--. 1 atlas atlas    499787 Nov  8 14:52 input.tar.gz
2024-11-08 18:38:57 (831113): Guest Log: -rw-r--r--. 1 atlas atlas     17569 Nov  8 14:52 start_atlas.sh
2024-11-08 18:38:57 (831113): Guest Log: -rw-r--r--. 1 atlas atlas      6658 Nov  8 14:52 init_data.xml
2024-11-08 18:38:57 (831113): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Nov  8 14:52 EVNT.41944315._000004.pool.root.1 -> /data/./ATLAS.root_0
2024-11-08 18:38:57 (831113): Guest Log: -rw-r--r--. 1 atlas atlas      2624 Nov  8 14:52 pandaJob.out
2024-11-08 18:38:57 (831113): Guest Log: -rw-------. 1 atlas atlas       424 Nov  8 14:52 setup.sh.local
2024-11-08 18:38:57 (831113): Guest Log: -rw-------. 1 atlas atlas   1011227 Nov  8 14:53 agis_schedconf.cvmfs.json
2024-11-08 18:38:57 (831113): Guest Log: -rw-------. 1 atlas atlas   1597102 Nov  8 14:53 agis_ddmendpoints.agis.ALL.json
2024-11-08 18:38:57 (831113): Guest Log: drwx------. 4 atlas atlas      4096 Nov  8 14:53 pilot3
2024-11-08 18:38:57 (831113): Guest Log: -rw-------. 1 atlas atlas 222332661 Nov  8 17:37 HITS.41944320._000079.pool.root.1
2024-11-08 18:38:57 (831113): Guest Log: -rw-------. 1 atlas atlas        95 Nov  8 17:38 pilot_heartbeat.json
2024-11-08 18:38:57 (831113): Guest Log: -rw-------. 1 atlas atlas      1033 Nov  8 17:38 memory_monitor_summary.json
2024-11-08 18:38:57 (831113): Guest Log: -rw-------. 1 atlas atlas    249486 Nov  8 17:38 log.41944320._000079.job.log.tgz.1
2024-11-08 18:38:57 (831113): Guest Log: -rw-------. 1 atlas atlas      7728 Nov  8 17:38 heartbeat.json
2024-11-08 18:38:57 (831113): Guest Log: -rw-------. 1 atlas atlas      4470 Nov  8 17:38 pilotlog.txt
2024-11-08 18:38:57 (831113): Guest Log: -rw-------. 1 atlas atlas    514304 Nov  8 17:38 log.41944320._000079.job.log.1
2024-11-08 18:38:57 (831113): Guest Log: -rw-------. 1 atlas atlas       357 Nov  8 17:38 output.list
2024-11-08 18:38:57 (831113): Guest Log: -rw-r--r--. 1 atlas atlas       620 Nov  8 17:38 runtime_log
2024-11-08 18:38:57 (831113): Guest Log: -rw-------. 1 atlas atlas    778240 Nov  8 17:38 result.tar.gz
2024-11-08 18:38:57 (831113): Guest Log: -rw-r--r--. 1 atlas atlas     11030 Nov  8 17:38 runtime_log.err
2024-11-08 18:38:57 (831113): Guest Log: -rw-------. 1 atlas atlas       687 Nov  8 17:38 NW2KDmdVbT6nsSi4ap6QjLDmwznN0nGgGQJmDC4LDmxVONDmjHzpEm.diag
2024-11-08 18:38:57 (831113): Guest Log: Looking for outputfile HITS.41944320._000079.pool.root.1
2024-11-08 18:38:57 (831113): Guest Log: HITS file was successfully produced
2024-11-08 18:38:57 (831113): Guest Log: -rw-------. 1 atlas atlas 222332661 Nov  8 17:37 /home/atlas/RunAtlas/HITS.41944320._000079.pool.root.1
2024-11-08 18:38:57 (831113): Guest Log: Successfully finished the ATLAS job!
2024-11-08 18:38:57 (831113): Guest Log: Copying the results back to the shared directory!
2024-11-08 18:38:57 (831113): Guest Log:  *** Contents of shared directory: ***
2024-11-08 18:38:57 (831113): Guest Log: total 261536
2024-11-08 18:38:57 (831113): Guest Log: -rw-r--r--. 1 root root 266501103 Nov  8 14:51 ATLAS.root_0
2024-11-08 18:38:57 (831113): Guest Log: -rw-r--r--. 1 root root      6658 Nov  8 14:51 init_data.xml
2024-11-08 18:38:57 (831113): Guest Log: -rw-r--r--. 1 root root    499787 Nov  8 14:51 input.tar.gz
2024-11-08 18:38:57 (831113): Guest Log: -rw-r--r--. 1 root root    778240 Nov  8 17:38 result.tar.gz
2024-11-08 18:38:57 (831113): Guest Log: -rw-r--r--. 1 root root     17569 Nov  8 14:51 start_atlas.sh
2024-11-08 18:38:57 (831113): Guest Log:  *** Success! Shutting down the machine. ***
2024-11-08 18:38:57 (831113): VM Completion File Detected.
2024-11-08 18:38:57 (831113): Powering off VM.
2024-11-08 18:38:57 (831113): Successfully stopped VM.
2024-11-08 18:38:57 (831113): Deregistering VM. (boinc_98c3c23939a0f6bd, slot#0)
2024-11-08 18:38:57 (831113): Removing network bandwidth throttle group from VM.
2024-11-08 18:38:57 (831113): Removing VM from VirtualBox.
18:39:03 (831113): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN