Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
16:22:53 (1481153): wrapper (7.7.26015): starting
16:22:53 (1481153): wrapper: running run_atlas (--nthreads 12)
[2024-11-06 16:22:53] Arguments: --nthreads 12
[2024-11-06 16:22:53] Threads: 12
[2024-11-06 16:22:53] Checking for CVMFS
[2024-11-06 16:22:55] Probing /cvmfs/atlas.cern.ch... OK
[2024-11-06 16:22:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-11-06 16:22:56] Running cvmfs_config stat atlas.cern.ch
[2024-11-06 16:22:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-11-06 16:22:57] 2.11.5.0 1481315 0 24924 139171 3 1 1796006 4194305 0 130560 0 0 0.000 1165 872 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.150.1:3128 1
[2024-11-06 16:22:57] CVMFS is ok
[2024-11-06 16:22:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-11-06 16:22:57] Checking for apptainer binary...
[2024-11-06 16:22:57] apptainer is not installed, using version from CVMFS
[2024-11-06 16:22:57] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-11-06 16:22:59] Trebeth
[2024-11-06 16:22:59] apptainer works
[2024-11-06 16:22:59] Set ATHENA_PROC_NUMBER=12
[2024-11-06 16:22:59] Set ATHENA_CORE_NUMBER=12
[2024-11-06 16:22:59] Starting ATLAS job with PandaID=6393678482
[2024-11-06 16:22:59] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-11-06 16:55:45]  *** The last 200 lines of the pilot log: ***
[2024-11-06 16:55:45]  ddmendpoint_alt=None
[2024-11-06 16:55:45]  direct_access_lan=False
[2024-11-06 16:55:45]  direct_access_wan=False
[2024-11-06 16:55:45]  domain=
[2024-11-06 16:55:45]  filesize=1595307
[2024-11-06 16:55:45]  filetype=log
[2024-11-06 16:55:45]  guid=6debf3da-19b1-48a2-8ab1-66ee23a96840
[2024-11-06 16:55:45]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-11-06 16:55:45]  is_altstaged=None
[2024-11-06 16:55:45]  is_tar=False
[2024-11-06 16:55:45]  lfn=log.41843886._007905.job.log.tgz.1
[2024-11-06 16:55:45]  mtime=0
[2024-11-06 16:55:45]  protocol_id=None
[2024-11-06 16:55:45]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-11-06 16:55:45]  replicas=None
[2024-11-06 16:55:45]  scope=mc16_13TeV
[2024-11-06 16:55:45]  status=None
[2024-11-06 16:55:45]  status_code=0
[2024-11-06 16:55:45]  storage_token=
[2024-11-06 16:55:45]  surl=/var/lib/boinc-client/slots/0/PanDA_Pilot-6393678482/log.41843886._007905.job.log.tgz.1
[2024-11-06 16:55:45]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/20/bf/log.41843886._007905.job.log.tgz.1
[2024-11-06 16:55:45]  workdir=None
[2024-11-06 16:55:45] ]
[2024-11-06 16:55:45] 2024-11-06 21:55:22,312 | INFO     | transferring file log.41843886._007905.job.log.tgz.1 from /var/lib/boinc-client/slots/0/PanDA_Pilot-6393678482/log.41843886._007905.job.log.tgz.1 to /var/lib/boinc
[2024-11-06 16:55:45] 2024-11-06 21:55:22,312 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/0/PanDA_Pilot-6393678482/log.41843886._007905.job.log.tgz.1 /var/lib/boinc-client/slots/0/log.418438
[2024-11-06 16:55:45] 2024-11-06 21:55:22,327 | INFO     | adding to output.list: log.41843886._007905.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/20/bf/log.41843886._007905.job.log.tgz.
[2024-11-06 16:55:45] 2024-11-06 21:55:22,328 | INFO     | alt stage-out settings: ['pl', 'pw', 'w', 'default'], is_unified=False, altstageout=False, remain_files=0, has_altstorage=True
[2024-11-06 16:55:45] 2024-11-06 21:55:22,328 | INFO     | summary of transferred files:
[2024-11-06 16:55:45] 2024-11-06 21:55:22,328 | INFO     |  -- lfn=log.41843886._007905.job.log.tgz.1, status_code=0, status=transferred
[2024-11-06 16:55:45] 2024-11-06 21:55:22,329 | INFO     | stage-out finished correctly
[2024-11-06 16:55:45] 2024-11-06 21:55:23,587 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-11-06 16:55:45] 2024-11-06 21:55:26,484 | INFO     | job 6393678482 has state=finished
[2024-11-06 16:55:45] 2024-11-06 21:55:26,484 | INFO     | preparing for final server update for job 6393678482 in state='finished'
[2024-11-06 16:55:45] 2024-11-06 21:55:26,485 | INFO     | this job has now completed (state=finished)
[2024-11-06 16:55:45] 2024-11-06 21:55:26,485 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-11-06 16:55:45] 2024-11-06 21:55:26,485 | INFO     | log transfer has been attempted: DONE
[2024-11-06 16:55:45] 2024-11-06 21:55:26,485 | INFO     | job 6393678482 has finished - writing final server update
[2024-11-06 16:55:45] 2024-11-06 21:55:26,486 | INFO     | total number of processed events: 50 (read)
[2024-11-06 16:55:45] 2024-11-06 21:55:26,504 | WARNING  | process 1492712 is no longer using CPU - aborting
[2024-11-06 16:55:45] 2024-11-06 21:55:26,510 | INFO     | executing command: lscpu
[2024-11-06 16:55:45] 2024-11-06 21:55:26,564 | INFO     | found 28 cores (14 cores per socket, 2 sockets)
[2024-11-06 16:55:45] 2024-11-06 21:55:26,581 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-11-06 16:55:45] 2024-11-06 21:55:29,007 | INFO     | monitor loop #158: job 0:6393678482 is in state 'finished'
[2024-11-06 16:55:45] 2024-11-06 21:55:29,008 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-11-06 16:55:45] 2024-11-06 21:55:30,039 | INFO     | CPU arch script returned: x86-64-v3
[2024-11-06 16:55:45] 2024-11-06 21:55:30,039 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6393678482/memory_monitor_summary.json (trf name=prmon)
[2024-11-06 16:55:45] 2024-11-06 21:55:30,040 | INFO     | extracted standard info from prmon json
[2024-11-06 16:55:45] 2024-11-06 21:55:30,041 | INFO     | extracted standard memory fields from prmon json
[2024-11-06 16:55:45] 2024-11-06 21:55:30,041 | WARNING  | GPU info not found in prmon json: 'gpu'
[2024-11-06 16:55:45] 2024-11-06 21:55:30,042 | INFO     | fitting pss+swap vs Time
[2024-11-06 16:55:45] 2024-11-06 21:55:30,042 | INFO     | model: linear, x: [1730928562.0, 1730928623.0, 1730928684.0, 1730928745.0, 1730928806.0, 1730928867.0, 1730928928.0, 1730928989.0, 1730929050.0, 1730929111.0, 1730
[2024-11-06 16:55:45] 2024-11-06 21:55:30,042 | INFO     | sum of square deviations: 4279701.625
[2024-11-06 16:55:45] 2024-11-06 21:55:30,043 | INFO     | sum of deviations: 6791078295.375
[2024-11-06 16:55:45] 2024-11-06 21:55:30,043 | INFO     | mean x: 1730929263.625
[2024-11-06 16:55:45] 2024-11-06 21:55:30,043 | INFO     | mean y: 2000116.0416666667
[2024-11-06 16:55:45] 2024-11-06 21:55:30,043 | INFO     | -- intersect: -2746655870695.9614
[2024-11-06 16:55:45] 2024-11-06 21:55:30,043 | INFO     | intersect: -2746655870695.9614
[2024-11-06 16:55:45] 2024-11-06 21:55:30,043 | INFO     | chi2: 2.2488410154420944
[2024-11-06 16:55:45] 2024-11-06 21:55:30,043 | INFO     | -- intersect: -2746655870695.9614
[2024-11-06 16:55:45] 2024-11-06 21:55:30,043 | INFO     | current memory leak: 1586.81 B/s (using 24 data points, chi2=2.25)
[2024-11-06 16:55:45] 2024-11-06 21:55:30,044 | INFO     | ..............................
[2024-11-06 16:55:45] 2024-11-06 21:55:30,044 | INFO     | . Timing measurements:
[2024-11-06 16:55:45] 2024-11-06 21:55:30,044 | INFO     | . get job = 0 s
[2024-11-06 16:55:45] 2024-11-06 21:55:30,044 | INFO     | . initial setup = 6 s
[2024-11-06 16:55:45] 2024-11-06 21:55:30,044 | INFO     | . payload setup = 16 s
[2024-11-06 16:55:45] 2024-11-06 21:55:30,044 | INFO     | . stage-in = 0 s
[2024-11-06 16:55:45] 2024-11-06 21:55:30,044 | INFO     | . payload execution = 1865 s
[2024-11-06 16:55:45] 2024-11-06 21:55:30,044 | INFO     | . stage-out = 0 s
[2024-11-06 16:55:45] 2024-11-06 21:55:30,044 | INFO     | . log creation = 0 s
[2024-11-06 16:55:45] 2024-11-06 21:55:30,044 | INFO     | ..............................
[2024-11-06 16:55:45] 2024-11-06 21:55:30,091 | INFO     | 
[2024-11-06 16:55:45] 2024-11-06 21:55:30,091 | INFO     | job summary report
[2024-11-06 16:55:45] 2024-11-06 21:55:30,091 | INFO     | --------------------------------------------------
[2024-11-06 16:55:45] 2024-11-06 21:55:30,091 | INFO     | PanDA job id: 6393678482
[2024-11-06 16:55:45] 2024-11-06 21:55:30,091 | INFO     | task id: 41843886
[2024-11-06 16:55:45] 2024-11-06 21:55:30,092 | INFO     | errors: (none)
[2024-11-06 16:55:45] 2024-11-06 21:55:30,092 | INFO     | status: LOG_TRANSFER = DONE 
[2024-11-06 16:55:45] 2024-11-06 21:55:30,092 | INFO     | pilot state: finished 
[2024-11-06 16:55:45] 2024-11-06 21:55:30,092 | INFO     | transexitcode: 0
[2024-11-06 16:55:45] 2024-11-06 21:55:30,092 | INFO     | exeerrorcode: 0
[2024-11-06 16:55:45] 2024-11-06 21:55:30,092 | INFO     | exeerrordiag: 
[2024-11-06 16:55:45] 2024-11-06 21:55:30,092 | INFO     | exitcode: 0
[2024-11-06 16:55:45] 2024-11-06 21:55:30,092 | INFO     | exitmsg: OK
[2024-11-06 16:55:45] 2024-11-06 21:55:30,092 | INFO     | cpuconsumptiontime: 7661 s
[2024-11-06 16:55:45] 2024-11-06 21:55:30,093 | INFO     | nevents: 50
[2024-11-06 16:55:45] 2024-11-06 21:55:30,093 | INFO     | neventsw: 0
[2024-11-06 16:55:45] 2024-11-06 21:55:30,093 | INFO     | pid: 1492712
[2024-11-06 16:55:45] 2024-11-06 21:55:30,093 | INFO     | pgrp: 1492712
[2024-11-06 16:55:45] 2024-11-06 21:55:30,093 | INFO     | corecount: 12
[2024-11-06 16:55:45] 2024-11-06 21:55:30,093 | INFO     | event service: False
[2024-11-06 16:55:45] 2024-11-06 21:55:30,093 | INFO     | sizes: {0: 2413016, 1: 2413215, 5: 2413421, 11: 2413477, 1885: 2438944, 1886: 2447978, 1887: 2448162, 1894: 2448384}
[2024-11-06 16:55:45] 2024-11-06 21:55:30,093 | INFO     | --------------------------------------------------
[2024-11-06 16:55:45] 2024-11-06 21:55:30,093 | INFO     | 
[2024-11-06 16:55:45] 2024-11-06 21:55:30,094 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2024-11-06 16:55:45] 2024-11-06 21:55:30,113 | INFO     | queue jobs had 0 job(s) [purged]
[2024-11-06 16:55:45] 2024-11-06 21:55:30,113 | INFO     | queue payloads had 0 job(s) [purged]
[2024-11-06 16:55:45] 2024-11-06 21:55:30,113 | INFO     | queue data_in had 0 job(s) [purged]
[2024-11-06 16:55:45] 2024-11-06 21:55:30,113 | INFO     | queue data_out had 0 job(s) [purged]
[2024-11-06 16:55:45] 2024-11-06 21:55:30,113 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-11-06 16:55:45] 2024-11-06 21:55:30,114 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-11-06 16:55:45] 2024-11-06 21:55:30,114 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-11-06 16:55:45] 2024-11-06 21:55:30,114 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-11-06 16:55:45] 2024-11-06 21:55:30,114 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-11-06 16:55:45] 2024-11-06 21:55:30,114 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-11-06 16:55:45] 2024-11-06 21:55:30,114 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-11-06 16:55:45] 2024-11-06 21:55:30,114 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-11-06 16:55:45] 2024-11-06 21:55:30,114 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-11-06 16:55:45] 2024-11-06 21:55:30,114 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-11-06 16:55:45] 2024-11-06 21:55:30,114 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-11-06 16:55:45] 2024-11-06 21:55:30,114 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-11-06 16:55:45] 2024-11-06 21:55:30,114 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-11-06 16:55:45] 2024-11-06 21:55:30,115 | INFO     | queue completed_jobids has 1 job(s)
[2024-11-06 16:55:45] 2024-11-06 21:55:30,115 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-11-06 16:55:45] 2024-11-06 21:55:30,115 | INFO     | queue messages had 0 job(s) [purged]
[2024-11-06 16:55:45] 2024-11-06 21:55:30,115 | INFO     | job 6393678482 has completed (purged errors)
[2024-11-06 16:55:45] 2024-11-06 21:55:30,115 | INFO     | overall cleanup function is called
[2024-11-06 16:55:45] 2024-11-06 21:55:31,129 | INFO     | --- collectZombieJob: --- 10, [1492712]
[2024-11-06 16:55:45] 2024-11-06 21:55:31,129 | INFO     | zombie collector waiting for pid 1492712
[2024-11-06 16:55:45] 2024-11-06 21:55:31,129 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-11-06 16:55:45] 2024-11-06 21:55:31,129 | INFO     | collected zombie processes
[2024-11-06 16:55:45] 2024-11-06 21:55:31,129 | INFO     | will attempt to kill all subprocesses of pid=1492712
[2024-11-06 16:55:45] 2024-11-06 21:55:31,205 | INFO     | process IDs to be killed: [1492712] (in reverse order)
[2024-11-06 16:55:45] 2024-11-06 21:55:31,251 | WARNING  | found no corresponding commands to process id(s)
[2024-11-06 16:55:45] 2024-11-06 21:55:31,251 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-11-06 16:55:45] 2024-11-06 21:55:31,256 | INFO     | did not find any defunct processes belonging to 1492712
[2024-11-06 16:55:45] 2024-11-06 21:55:31,260 | INFO     | did not find any defunct processes belonging to 1492712
[2024-11-06 16:55:45] 2024-11-06 21:55:31,260 | INFO     | ready for new job
[2024-11-06 16:55:45] 2024-11-06 21:55:31,260 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-11-06 16:55:45] 2024-11-06 21:55:31,261 | INFO     | **************************************
[2024-11-06 16:55:45] 2024-11-06 21:55:31,261 | INFO     | ***  PanDA Pilot version 3.9.1.13  ***
[2024-11-06 16:55:45] 2024-11-06 21:55:31,261 | INFO     | **************************************
[2024-11-06 16:55:45] 2024-11-06 21:55:31,261 | INFO     | 
[2024-11-06 16:55:45] 2024-11-06 21:55:31,285 | INFO     | architecture information:
[2024-11-06 16:55:45] 2024-11-06 21:55:31,286 | INFO     | executing command: cat /etc/os-release
[2024-11-06 16:55:45] 2024-11-06 21:55:31,299 | INFO     | cat /etc/os-release:
[2024-11-06 16:55:45] NAME="CentOS Linux"
[2024-11-06 16:55:45] VERSION="7 (Core)"
[2024-11-06 16:55:45] ID="centos"
[2024-11-06 16:55:45] ID_LIKE="rhel fedora"
[2024-11-06 16:55:45] VERSION_ID="7"
[2024-11-06 16:55:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-11-06 16:55:45] ANSI_COLOR="0;31"
[2024-11-06 16:55:45] CPE_NAME="cpe:/o:centos:centos:7"
[2024-11-06 16:55:45] HOME_URL="https://www.centos.org/"
[2024-11-06 16:55:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-11-06 16:55:45] 
[2024-11-06 16:55:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-11-06 16:55:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-11-06 16:55:45] REDHAT_SUPPORT_PRODUCT="centos"
[2024-11-06 16:55:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-11-06 16:55:45] 
[2024-11-06 16:55:45] 2024-11-06 21:55:31,299 | INFO     | **************************************
[2024-11-06 16:55:45] 2024-11-06 21:55:31,802 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2024-11-06 16:55:45] 2024-11-06 21:55:31,817 | INFO     | sufficient remaining disk space (411152941056 B)
[2024-11-06 16:55:45] 2024-11-06 21:55:31,817 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-11-06 16:55:45] 2024-11-06 21:55:31,818 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-11-06 16:55:45] 2024-11-06 21:55:31,818 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-11-06 16:55:45] 2024-11-06 21:55:31,973 | INFO     | all data control threads have been joined
[2024-11-06 16:55:45] 2024-11-06 21:55:32,227 | INFO     | all payload control threads have been joined
[2024-11-06 16:55:45] 2024-11-06 21:55:32,516 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-11-06 16:55:45] 2024-11-06 21:55:32,516 | INFO     | aborting loop
[2024-11-06 16:55:45] 2024-11-06 21:55:32,680 | INFO     | found 0 job(s) in 20 queues
[2024-11-06 16:55:45] 2024-11-06 21:55:32,681 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-11-06 16:55:45] 2024-11-06 21:55:32,681 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-11-06 16:55:45] 2024-11-06 21:55:32,823 | INFO     | [job] retrieve thread has finished
[2024-11-06 16:55:45] 2024-11-06 21:55:32,823 | INFO     | [job] queue monitor thread has finished
[2024-11-06 16:55:45] 2024-11-06 21:55:32,881 | INFO     | [payload] failed_post thread has finished
[2024-11-06 16:55:45] 2024-11-06 21:55:32,885 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-11-06 16:55:45] 2024-11-06 21:55:32,924 | INFO     | [payload] execute_payloads thread has finished
[2024-11-06 16:55:45] 2024-11-06 21:55:32,978 | INFO     | [data] control thread has finished
[2024-11-06 16:55:45] 2024-11-06 21:55:33,156 | INFO     | [payload] run_realtimelog thread has finished
[2024-11-06 16:55:45] 2024-11-06 21:55:33,216 | INFO     | all job control threads have been joined
[2024-11-06 16:55:45] 2024-11-06 21:55:33,233 | INFO     | [payload] control thread has finished
[2024-11-06 16:55:45] 2024-11-06 21:55:33,521 | INFO     | [job] job monitor thread has finished
[2024-11-06 16:55:45] 2024-11-06 21:55:33,682 | INFO     | [payload] validate_post thread has finished
[2024-11-06 16:55:45] 2024-11-06 21:55:34,002 | INFO     | [data] copytool_in thread has finished
[2024-11-06 16:55:45] 2024-11-06 21:55:34,003 | INFO     | [job] validate thread has finished
[2024-11-06 16:55:45] 2024-11-06 21:55:34,109 | INFO     | [job] create_data_payload thread has finished
[2024-11-06 16:55:45] 2024-11-06 21:55:34,140 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-11-06 16:55:45] 2024-11-06 21:55:34,222 | INFO     | [job] control thread has finished
[2024-11-06 16:55:45] 2024-11-06 21:55:34,282 | INFO     | [payload] validate_pre thread has finished
[2024-11-06 16:55:45] 2024-11-06 21:55:34,891 | INFO     | [data] copytool_out thread has finished
[2024-11-06 16:55:45] 2024-11-06 21:55:38,146 | INFO     | [data] queue_monitor thread has finished
[2024-11-06 16:55:45] 2024-11-06 21:55:40,059 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140049809258304)>', '<ExcThread(monitor, started 140049085626112)>']
[2024-11-06 16:55:45] 2024-11-06 21:55:40,722 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-11-06 16:55:45] 2024-11-06 21:55:40,722 | INFO     | [monitor] control thread has ended
[2024-11-06 16:55:45] 2024-11-06 21:55:45,085 | INFO     | all workflow threads have been joined
[2024-11-06 16:55:45] 2024-11-06 21:55:45,085 | INFO     | end of generic workflow (traces error code: 0)
[2024-11-06 16:55:45] 2024-11-06 21:55:45,085 | INFO     | traces error code: 0
[2024-11-06 16:55:45] 2024-11-06 21:55:45,086 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-11-06 16:55:45] 2024-11-06 21:55:45,150 [wrapper] ==== pilot stdout END ====
[2024-11-06 16:55:45] 2024-11-06 21:55:45,153 [wrapper] ==== wrapper stdout RESUME ====
[2024-11-06 16:55:45] 2024-11-06 21:55:45,156 [wrapper] pilotpid: 1485659
[2024-11-06 16:55:45] 2024-11-06 21:55:45,159 [wrapper] Pilot exit status: 0
[2024-11-06 16:55:45] 2024-11-06 21:55:45,169 [wrapper] pandaids: 6393678482
[2024-11-06 16:55:45] 2024-11-06 21:55:45,206 [wrapper] cleanup supervisor_pilot 1508523 1485660
[2024-11-06 16:55:45] 2024-11-06 21:55:45,208 [wrapper] Test setup, not cleaning
[2024-11-06 16:55:45] 2024-11-06 21:55:45,210 [wrapper] ==== wrapper stdout END ====
[2024-11-06 16:55:45] 2024-11-06 21:55:45,212 [wrapper] ==== wrapper stderr END ====
[2024-11-06 16:55:45] 2024-11-06 21:55:45,217 [wrapper] apfmon messages muted
[2024-11-06 16:55:45]  *** Error codes and diagnostics ***
[2024-11-06 16:55:45]     "exeErrorCode": 0,
[2024-11-06 16:55:45]     "exeErrorDiag": "",
[2024-11-06 16:55:45]     "pilotErrorCode": 0,
[2024-11-06 16:55:45]     "pilotErrorDiag": "",
[2024-11-06 16:55:45]  *** Listing of results directory ***
[2024-11-06 16:55:45] total 404520
[2024-11-06 16:55:45] -rw-r--r-- 1 boinc boinc      5652 Nov  6 16:17 queuedata.json
[2024-11-06 16:55:45] -rw-r--r-- 1 boinc boinc    486088 Nov  6 16:20 pilot3.tar.gz
[2024-11-06 16:55:45] -rwx------ 1 boinc boinc     34589 Nov  6 16:21 runpilot2-wrapper.sh
[2024-11-06 16:55:45] -rw-r--r-- 1 boinc boinc       100 Nov  6 16:22 wrapper_26015_x86_64-pc-linux-gnu
[2024-11-06 16:55:45] -rwxr-xr-x 1 boinc boinc      7986 Nov  6 16:22 run_atlas
[2024-11-06 16:55:45] -rw-r--r-- 1 boinc boinc       105 Nov  6 16:22 job.xml
[2024-11-06 16:55:45] -rw-r--r-- 2 boinc boinc     17569 Nov  6 16:22 start_atlas.sh
[2024-11-06 16:55:45] drwxrwx--x 2 boinc boinc      4096 Nov  6 16:22 shared
[2024-11-06 16:55:45] -rw-r--r-- 2 boinc boinc    499908 Nov  6 16:22 input.tar.gz
[2024-11-06 16:55:45] -rw-r--r-- 1 boinc boinc      7599 Nov  6 16:22 init_data.xml
[2024-11-06 16:55:45] -rw-r--r-- 2 boinc boinc 359659943 Nov  6 16:22 EVNT.41780015._000011.pool.root.1
[2024-11-06 16:55:45] -rw-r--r-- 1 boinc boinc         0 Nov  6 16:22 boinc_lockfile
[2024-11-06 16:55:45] -rw-r--r-- 1 boinc boinc      2853 Nov  6 16:22 pandaJob.out
[2024-11-06 16:55:45] -rw------- 1 boinc boinc       460 Nov  6 16:23 setup.sh.local
[2024-11-06 16:55:45] -rw------- 1 boinc boinc   1016447 Nov  6 16:23 agis_schedconf.cvmfs.json
[2024-11-06 16:55:45] -rw------- 1 boinc boinc   1602446 Nov  6 16:23 agis_ddmendpoints.agis.ALL.json
[2024-11-06 16:55:45] drwx------ 4 boinc boinc      4096 Nov  6 16:23 pilot3
[2024-11-06 16:55:45] -rw-r--r-- 1 boinc boinc       528 Nov  6 16:49 boinc_task_state.xml
[2024-11-06 16:55:45] -rw------- 1 boinc boinc        95 Nov  6 16:54 pilot_heartbeat.json
[2024-11-06 16:55:45] -rw------- 1 boinc boinc  47067672 Nov  6 16:55 HITS.41843886._007905.pool.root.1
[2024-11-06 16:55:45] -rw------- 1 boinc boinc      1036 Nov  6 16:55 memory_monitor_summary.json
[2024-11-06 16:55:45] -rw------- 1 boinc boinc   1595307 Nov  6 16:55 log.41843886._007905.job.log.tgz.1
[2024-11-06 16:55:45] -rw------- 1 boinc boinc      8525 Nov  6 16:55 heartbeat.json
[2024-11-06 16:55:45] -rw-r--r-- 1 boinc boinc        26 Nov  6 16:55 wrapper_checkpoint.txt
[2024-11-06 16:55:45] -rw------- 1 boinc boinc      4223 Nov  6 16:55 pilotlog.txt
[2024-11-06 16:55:45] -rw------- 1 boinc boinc    228494 Nov  6 16:55 log.41843886._007905.job.log.1
[2024-11-06 16:55:45] -rw-r--r-- 1 boinc boinc      8192 Nov  6 16:55 boinc_mmap_file
[2024-11-06 16:55:45] -rw------- 1 boinc boinc       353 Nov  6 16:55 output.list
[2024-11-06 16:55:45] -rw-r--r-- 1 boinc boinc       620 Nov  6 16:55 runtime_log
[2024-11-06 16:55:45] -rw------- 1 boinc boinc   1843200 Nov  6 16:55 result.tar.gz
[2024-11-06 16:55:45] -rw-r--r-- 1 boinc boinc     11473 Nov  6 16:55 runtime_log.err
[2024-11-06 16:55:45] -rw------- 1 boinc boinc       646 Nov  6 16:55 ohWLDmce2S6n9Rq4apOajLDm4fhM0noT9bVorHsSDmVT6LDmdYrkxn.diag
[2024-11-06 16:55:45] -rw-r--r-- 1 boinc boinc     20709 Nov  6 16:55 stderr.txt
[2024-11-06 16:55:45] HITS file was successfully produced:
[2024-11-06 16:55:45] -rw------- 1 boinc boinc 47067672 Nov  6 16:55 shared/HITS.pool.root.1
[2024-11-06 16:55:45]  *** Contents of shared directory: ***
[2024-11-06 16:55:45] total 399516
[2024-11-06 16:55:45] -rw-r--r-- 2 boinc boinc     17569 Nov  6 16:22 start_atlas.sh
[2024-11-06 16:55:45] -rw-r--r-- 2 boinc boinc    499908 Nov  6 16:22 input.tar.gz
[2024-11-06 16:55:45] -rw-r--r-- 2 boinc boinc 359659943 Nov  6 16:22 ATLAS.root_0
[2024-11-06 16:55:45] -rw------- 1 boinc boinc  47067672 Nov  6 16:55 HITS.pool.root.1
[2024-11-06 16:55:45] -rw------- 1 boinc boinc   1843200 Nov  6 16:55 result.tar.gz
16:55:46 (1481153): run_atlas exited; CPU time 7620.064820
16:55:46 (1481153): called boinc_finish(0)

</stderr_txt>
]]>

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