Name jIpMDm9bcS6n9Rq4apOajLDm4fhM0noT9bVorHsSDmy44LDmGBDzJm_0
Workunit 227108091
Created 5 Nov 2024, 17:34:42 UTC
Sent 5 Nov 2024, 18:14:25 UTC
Report deadline 13 Nov 2024, 18:14:25 UTC
Received 5 Nov 2024, 21:55:01 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 10695550
Run time 1 hours 8 min 29 sec
CPU time 2 hours 5 min 53 sec
Validate state Valid
Credit 195.82
Device peak FLOPS 61.92 GFLOPS
Application version ATLAS Simulation v3.01 (vbox64_mt_mcore_atlas)
x86_64-pc-linux-gnu
Peak working set size 4.13 GB
Peak swap size 5.75 GB
Peak disk usage 1.97 GB

Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
2024-11-05 20:45:59 (485427): Detected: vboxwrapper 26206
2024-11-05 20:45:59 (485427): Detected: BOINC client v8.0.4
2024-11-05 20:45:59 (485427): Detected: VirtualBox VboxManage Interface (Version: 7.1.4)
2024-11-05 20:45:59 (485427): Successfully copied 'init_data.xml' to the shared directory.
2024-11-05 20:45:59 (485427): Create VM. (boinc_5212df2949fd40ef, slot#0)
2024-11-05 20:46:00 (485427): Setting Memory Size for VM. (4800MB)
2024-11-05 20:46:00 (485427): Setting CPU Count for VM. (8)
2024-11-05 20:46:00 (485427): Setting Chipset Options for VM.
2024-11-05 20:46:00 (485427): Setting Graphics Controller Options for VM.
2024-11-05 20:46:00 (485427): Setting Boot Options for VM.
2024-11-05 20:46:00 (485427): Setting Network Configuration for NAT.
2024-11-05 20:46:00 (485427): Enabling VM Network Access.
2024-11-05 20:46:00 (485427): Disabling USB Support for VM.
2024-11-05 20:46:00 (485427): Disabling COM Port Support for VM.
2024-11-05 20:46:00 (485427): Disabling LPT Port Support for VM.
2024-11-05 20:46:00 (485427): Disabling Audio Support for VM.
2024-11-05 20:46:00 (485427): Disabling Clipboard Support for VM.
2024-11-05 20:46:00 (485427): Disabling Drag and Drop Support for VM.
2024-11-05 20:46:00 (485427): Adding storage controller(s) to VM.
2024-11-05 20:46:00 (485427): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2024-11-05 20:46:01 (485427): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2024-11-05 20:46:01 (485427): forwarding host port 33483 to guest port 80
2024-11-05 20:46:01 (485427): Enabling remote desktop for VM.
2024-11-05 20:46:01 (485427): Required extension pack not installed, remote desktop not enabled.
2024-11-05 20:46:01 (485427): Enabling shared directory for VM.
2024-11-05 20:46:01 (485427): Starting VM using VBoxManage interface. (boinc_5212df2949fd40ef, slot#0)
2024-11-05 20:46:02 (485427): Successfully started VM. (PID = '485687')
2024-11-05 20:46:02 (485427): Reporting VM Process ID to BOINC.
2024-11-05 20:46:02 (485427): Guest Log: BIOS: VirtualBox 7.1.4
2024-11-05 20:46:02 (485427): Guest Log: CPUID EDX: 0x178bfbff
2024-11-05 20:46:02 (485427): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2024-11-05 20:46:02 (485427): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2024-11-05 20:46:02 (485427): VM state change detected. (old = 'poweredoff', new = 'running')
2024-11-05 20:46:02 (485427): Detected: Web Application Enabled (http://localhost:33483)
2024-11-05 20:46:02 (485427): Preference change detected
2024-11-05 20:46:02 (485427): Setting CPU throttle for VM. (50%)
2024-11-05 20:46:02 (485427): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2024-11-05 20:46:04 (485427): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2024-11-05 20:46:04 (485427): Guest Log: BIOS: Booting from Hard Disk...
2024-11-05 20:46:07 (485427): Guest Log: BIOS: KBD: unsupported int 16h function 03
2024-11-05 20:46:07 (485427): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2024-11-05 20:46:07 (485427): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2024-11-05 20:46:07 (485427): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2024-11-05 20:46:07 (485427): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2024-11-05 20:46:07 (485427): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2024-11-05 20:46:07 (485427): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2024-11-05 20:46:07 (485427): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2024-11-05 20:46:07 (485427): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2024-11-05 20:46:07 (485427): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2024-11-05 20:46:07 (485427): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2024-11-05 20:46:07 (485427): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2024-11-05 20:46:07 (485427): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2024-11-05 20:46:07 (485427): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2024-11-05 20:46:07 (485427): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2024-11-05 20:46:07 (485427): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2024-11-05 20:46:07 (485427): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2024-11-05 20:46:07 (485427): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2024-11-05 20:46:07 (485427): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2024-11-05 20:46:07 (485427): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2024-11-05 20:46:07 (485427): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2024-11-05 20:46:07 (485427): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2024-11-05 20:46:07 (485427): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2024-11-05 20:46:07 (485427): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2024-11-05 20:46:07 (485427): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2024-11-05 20:46:07 (485427): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2024-11-05 20:46:07 (485427): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2024-11-05 20:46:07 (485427): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2024-11-05 20:46:07 (485427): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2024-11-05 20:46:07 (485427): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2024-11-05 20:46:07 (485427): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2024-11-05 20:46:07 (485427): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2024-11-05 20:46:15 (485427): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2024-11-05 20:46:15 (485427): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2024-11-05 20:46:22 (485427): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2024-11-05 20:46:22 (485427): Guest Log: 00:00:00.000201 main     Log opened 2024-11-05T19:46:19.569762000Z
2024-11-05 20:46:22 (485427): Guest Log: 00:00:00.000279 main     OS Product: Linux
2024-11-05 20:46:22 (485427): Guest Log: 00:00:00.000291 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2024-11-05 20:46:22 (485427): Guest Log: 00:00:00.000301 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2024-11-05 20:46:22 (485427): Guest Log: 00:00:00.000310 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2024-11-05 20:46:22 (485427): Guest Log: 00:00:00.000311 main     Process ID: 1366
2024-11-05 20:46:22 (485427): Guest Log: 00:00:00.000311 main     Package type: LINUX_64BITS_GENERIC
2024-11-05 20:46:22 (485427): Guest Log: 00:00:00.000821 main     5.2.32 r132073 started. Verbose level = 0
2024-11-05 20:46:22 (485427): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2024-11-05 20:46:22 (485427): Guest Log: [INFO] Mounting shared directory
2024-11-05 20:46:22 (485427): Guest Log: [INFO] Checking for init_data.xml
2024-11-05 20:46:24 (485427): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2024-11-05 20:46:24 (485427): Guest Log: [INFO] Detected branch: prod
2024-11-05 20:46:24 (485427): Guest Log: This is the prod version of the ATLAS job wrapper
2024-11-05 20:46:24 (485427): Guest Log: Copying input files
2024-11-05 20:46:26 (485427): Guest Log: Copied input files into RunAtlas.
2024-11-05 20:46:26 (485427): Guest Log: This VM did not configure a local http proxy via BOINC.
2024-11-05 20:46:26 (485427): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2024-11-05 20:46:26 (485427): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2024-11-05 20:46:26 (485427): Guest Log: Further information can be found at the LHC@home message board.
2024-11-05 20:46:33 (485427): Guest Log: Running cvmfs_config stat atlas.cern.ch
2024-11-05 20:46:33 (485427): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2024-11-05 20:46:33 (485427): Guest Log: 2.6.3.0 1643 0 30232 139136 4 1 3117281 4096000 0 65024 0 0 n/a 1 2 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
2024-11-05 20:46:34 (485427): Guest Log: copied the webapp to /var/www
2024-11-05 20:46:34 (485427): Guest Log: ATHENA_PROC_NUMBER=8
2024-11-05 20:46:34 (485427): Guest Log: ATHENA_CORE_NUMBER=8
2024-11-05 20:46:34 (485427): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2024-11-05 20:46:34 (485427): Guest Log:  *** Starting ATLAS job. (PandaID=6391563438 taskID=41843961) ***
2024-11-05 21:54:20 (485427): Guest Log:  *** Job finished ***
2024-11-05 21:54:20 (485427): Guest Log:  *** The last 20 lines of the pilot log: ***
2024-11-05 21:54:20 (485427): Guest Log: 2024-11-05 20:54:07,129 | INFO     | [data] queue_monitor thread has finished
2024-11-05 21:54:20 (485427): Guest Log: 2024-11-05 20:54:12,078 | INFO     | job.realtimelogging is not enabled
2024-11-05 21:54:20 (485427): Guest Log: 2024-11-05 20:54:13,079 | INFO     | [payload] run_realtimelog thread has finished
2024-11-05 21:54:20 (485427): Guest Log: 2024-11-05 20:54:13,872 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140491986319168)>', '<ExcThread(monitor, started 140491265931008)>']
2024-11-05 21:54:20 (485427): Guest Log: 2024-11-05 20:54:14,575 | WARNING  | job_aborted has been set - aborting pilot monitoring
2024-11-05 21:54:20 (485427): Guest Log: 2024-11-05 20:54:14,575 | INFO     | [monitor] control thread has ended
2024-11-05 21:54:20 (485427): Guest Log: 2024-11-05 20:54:18,881 | INFO     | all workflow threads have been joined
2024-11-05 21:54:20 (485427): Guest Log: 2024-11-05 20:54:18,881 | INFO     | end of generic workflow (traces error code: 0)
2024-11-05 21:54:20 (485427): Guest Log: 2024-11-05 20:54:18,881 | INFO     | traces error code: 0
2024-11-05 21:54:20 (485427): Guest Log: 2024-11-05 20:54:18,882 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2024-11-05 21:54:20 (485427): Guest Log: 2024-11-05 20:54:19,034 [wrapper] ==== pilot stdout END ====
2024-11-05 21:54:20 (485427): Guest Log: 2024-11-05 20:54:19,039 [wrapper] ==== wrapper stdout RESUME ====
2024-11-05 21:54:20 (485427): Guest Log: 2024-11-05 20:54:19,043 [wrapper] pilotpid: 6013
2024-11-05 21:54:20 (485427): Guest Log: 2024-11-05 20:54:19,047 [wrapper] Pilot exit status: 0
2024-11-05 21:54:20 (485427): Guest Log: 2024-11-05 20:54:19,062 [wrapper] pandaids: 6391563438
2024-11-05 21:54:20 (485427): Guest Log: 2024-11-05 20:54:19,091 [wrapper] cleanup supervisor_pilot   806 6014
2024-11-05 21:54:20 (485427): Guest Log: 2024-11-05 20:54:19,096 [wrapper] Test setup, not cleaning
2024-11-05 21:54:20 (485427): Guest Log: 2024-11-05 20:54:19,100 [wrapper] ==== wrapper stdout END ====
2024-11-05 21:54:20 (485427): Guest Log: 2024-11-05 20:54:19,104 [wrapper] ==== wrapper stderr END ====
2024-11-05 21:54:20 (485427): Guest Log: 2024-11-05 20:54:19,112 [wrapper] apfmon messages muted
2024-11-05 21:54:20 (485427): Guest Log:  *** Error codes and diagnostics ***
2024-11-05 21:54:20 (485427): Guest Log:     "exeErrorCode": 0,
2024-11-05 21:54:20 (485427): Guest Log:     "exeErrorDiag": "",
2024-11-05 21:54:20 (485427): Guest Log:     "pilotErrorCode": 0,
2024-11-05 21:54:20 (485427): Guest Log:     "pilotErrorDiag": "",
2024-11-05 21:54:20 (485427): Guest Log:  *** Listing of results directory ***
2024-11-05 21:54:20 (485427): Guest Log: total 53528
2024-11-05 21:54:20 (485427): Guest Log: -rw-r--r--. 1 atlas atlas   486088 Nov  5 16:44 pilot3.tar.gz
2024-11-05 21:54:20 (485427): Guest Log: -rwx------. 1 atlas atlas    34589 Nov  5 17:33 runpilot2-wrapper.sh
2024-11-05 21:54:20 (485427): Guest Log: -rw-r--r--. 1 atlas atlas     5652 Nov  5 17:33 queuedata.json
2024-11-05 21:54:20 (485427): Guest Log: -rw-r--r--. 1 atlas atlas   499920 Nov  5 19:46 input.tar.gz
2024-11-05 21:54:20 (485427): Guest Log: -rw-r--r--. 1 atlas atlas     6825 Nov  5 19:46 init_data.xml
2024-11-05 21:54:20 (485427): Guest Log: -rw-r--r--. 1 atlas atlas    17569 Nov  5 19:46 start_atlas.sh
2024-11-05 21:54:20 (485427): Guest Log: lrwxrwxrwx. 1 atlas atlas       20 Nov  5 19:46 EVNT.41779542._000008.pool.root.1 -> /data/./ATLAS.root_0
2024-11-05 21:54:20 (485427): Guest Log: -rw-r--r--. 1 atlas atlas     2893 Nov  5 19:46 pandaJob.out
2024-11-05 21:54:20 (485427): Guest Log: -rw-------. 1 atlas atlas      424 Nov  5 19:46 setup.sh.local
2024-11-05 21:54:20 (485427): Guest Log: -rw-------. 1 atlas atlas  1021794 Nov  5 19:46 agis_schedconf.cvmfs.json
2024-11-05 21:54:20 (485427): Guest Log: -rw-------. 1 atlas atlas  1602446 Nov  5 19:46 agis_ddmendpoints.agis.ALL.json
2024-11-05 21:54:20 (485427): Guest Log: drwx------. 4 atlas atlas     4096 Nov  5 19:46 pilot3
2024-11-05 21:54:20 (485427): Guest Log: -rw-------. 1 atlas atlas       95 Nov  5 20:53 pilot_heartbeat.json
2024-11-05 21:54:20 (485427): Guest Log: -rw-------. 1 atlas atlas 47992456 Nov  5 20:53 HITS.41843961._006227.pool.root.1
2024-11-05 21:54:20 (485427): Guest Log: -rw-------. 1 atlas atlas     1036 Nov  5 20:53 memory_monitor_summary.json
2024-11-05 21:54:20 (485427): Guest Log: -rw-------. 1 atlas atlas  1197630 Nov  5 20:53 log.41843961._006227.job.log.tgz.1
2024-11-05 21:54:20 (485427): Guest Log: -rw-------. 1 atlas atlas     8566 Nov  5 20:53 heartbeat.json
2024-11-05 21:54:20 (485427): Guest Log: -rw-------. 1 atlas atlas     4533 Nov  5 20:54 pilotlog.txt
2024-11-05 21:54:20 (485427): Guest Log: -rw-------. 1 atlas atlas   322481 Nov  5 20:54 log.41843961._006227.job.log.1
2024-11-05 21:54:20 (485427): Guest Log: -rw-------. 1 atlas atlas      353 Nov  5 20:54 output.list
2024-11-05 21:54:20 (485427): Guest Log: -rw-r--r--. 1 atlas atlas      620 Nov  5 20:54 runtime_log
2024-11-05 21:54:20 (485427): Guest Log: -rw-------. 1 atlas atlas  1536000 Nov  5 20:54 result.tar.gz
2024-11-05 21:54:20 (485427): Guest Log: -rw-r--r--. 1 atlas atlas    11015 Nov  5 20:54 runtime_log.err
2024-11-05 21:54:20 (485427): Guest Log: -rw-------. 1 atlas atlas      681 Nov  5 20:54 jIpMDm9bcS6n9Rq4apOajLDm4fhM0noT9bVorHsSDmy44LDmGBDzJm.diag
2024-11-05 21:54:20 (485427): Guest Log: Looking for outputfile HITS.41843961._006227.pool.root.1
2024-11-05 21:54:20 (485427): Guest Log: HITS file was successfully produced
2024-11-05 21:54:20 (485427): Guest Log: -rw-------. 1 atlas atlas 47992456 Nov  5 20:53 /home/atlas/RunAtlas/HITS.41843961._006227.pool.root.1
2024-11-05 21:54:21 (485427): Guest Log: Successfully finished the ATLAS job!
2024-11-05 21:54:21 (485427): Guest Log: Copying the results back to the shared directory!
2024-11-05 21:54:21 (485427): Guest Log:  *** Contents of shared directory: ***
2024-11-05 21:54:21 (485427): Guest Log: total 372372
2024-11-05 21:54:21 (485427): Guest Log: -rw-r--r--. 1 root root 379233963 Nov  5 19:45 ATLAS.root_0
2024-11-05 21:54:21 (485427): Guest Log: -rw-r--r--. 1 root root      6825 Nov  5 19:45 init_data.xml
2024-11-05 21:54:21 (485427): Guest Log: -rw-r--r--. 1 root root    499920 Nov  5 19:45 input.tar.gz
2024-11-05 21:54:21 (485427): Guest Log: -rw-r--r--. 1 root root   1536000 Nov  5  2024 result.tar.gz
2024-11-05 21:54:21 (485427): Guest Log: -rw-r--r--. 1 root root     17569 Nov  5 19:45 start_atlas.sh
2024-11-05 21:54:21 (485427): Guest Log:  *** Success! Shutting down the machine. ***
2024-11-05 21:54:21 (485427): VM Completion File Detected.
2024-11-05 21:54:21 (485427): Powering off VM.
2024-11-05 21:54:22 (485427): Successfully stopped VM.
2024-11-05 21:54:22 (485427): Deregistering VM. (boinc_5212df2949fd40ef, slot#0)
2024-11-05 21:54:22 (485427): Removing network bandwidth throttle group from VM.
2024-11-05 21:54:22 (485427): Removing VM from VirtualBox.
21:54:27 (485427): called boinc_finish(0)

</stderr_txt>
]]>


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