Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:37:17 (56780): wrapper (7.7.26015): starting
18:37:17 (56780): wrapper: running run_atlas (--nthreads 8)
[2024-11-04 18:37:17] Arguments: --nthreads 8
[2024-11-04 18:37:17] Threads: 8
[2024-11-04 18:37:17] Checking for CVMFS
[2024-11-04 18:37:17] Probing /cvmfs/atlas.cern.ch... OK
[2024-11-04 18:37:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-11-04 18:37:17] Running cvmfs_config stat atlas.cern.ch
[2024-11-04 18:37:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-11-04 18:37:18] 2.11.2.0 39968 280 116704 139111 3 145 17089172 18432001 19576 130560 0 3389163 99.356 6092349 74560 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-11-04 18:37:18] CVMFS is ok
[2024-11-04 18:37:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-11-04 18:37:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-11-04 18:37:18] Further information can be found at the LHC@home message board.
[2024-11-04 18:37:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-11-04 18:37:18] Checking for apptainer binary...
[2024-11-04 18:37:18] Using apptainer found in PATH at /usr/bin/apptainer
[2024-11-04 18:37:18] Running /usr/bin/apptainer --version
[2024-11-04 18:37:18] apptainer version 1.3.2-1.el7
[2024-11-04 18:37:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-11-04 18:37:19] c-212-10.aglt2.org
[2024-11-04 18:37:19] apptainer works
[2024-11-04 18:37:19] Set ATHENA_PROC_NUMBER=8
[2024-11-04 18:37:19] Set ATHENA_CORE_NUMBER=8
[2024-11-04 18:37:20] Starting ATLAS job with PandaID=6390081079
[2024-11-04 18:37:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-11-04 19:52:21]  *** The last 200 lines of the pilot log: ***
[2024-11-04 19:52:21]  filesize=1187771
[2024-11-04 19:52:21]  filetype=log
[2024-11-04 19:52:21]  guid=3eee4c67-6da5-4433-a813-7196fa1ca660
[2024-11-04 19:52:21]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-11-04 19:52:21]  is_altstaged=None
[2024-11-04 19:52:21]  is_tar=False
[2024-11-04 19:52:21]  lfn=log.41843965._003471.job.log.tgz.1
[2024-11-04 19:52:21]  mtime=0
[2024-11-04 19:52:21]  protocol_id=None
[2024-11-04 19:52:21]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-11-04 19:52:21]  replicas=None
[2024-11-04 19:52:21]  scope=mc16_13TeV
[2024-11-04 19:52:21]  status=None
[2024-11-04 19:52:21]  status_code=0
[2024-11-04 19:52:21]  storage_token=
[2024-11-04 19:52:21]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6390081079/log.41843965._003471.job.log.tgz.1
[2024-11-04 19:52:21]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/3e/90/log.41843965._003471.job.log.tgz.1
[2024-11-04 19:52:21]  workdir=None
[2024-11-04 19:52:21] ]
[2024-11-04 19:52:21] 2024-11-05 00:51:56,230 | INFO     | transferring file log.41843965._003471.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6390081079/log.41843965._003471.job.log.tgz.1 to /tmp/boinchome/slots/
[2024-11-04 19:52:21] 2024-11-05 00:51:56,231 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6390081079/log.41843965._003471.job.log.tgz.1 /tmp/boinchome/slots/0/log.41843965._003471.job
[2024-11-04 19:52:21] 2024-11-05 00:51:56,252 | INFO     | adding to output.list: log.41843965._003471.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/3e/90/log.41843965._003471.job.log.tgz.
[2024-11-04 19:52:21] 2024-11-05 00:51:56,253 | INFO     | alt stage-out settings: ['pl', 'pw', 'w', 'default'], is_unified=False, altstageout=False, remain_files=0, has_altstorage=True
[2024-11-04 19:52:21] 2024-11-05 00:51:56,253 | INFO     | summary of transferred files:
[2024-11-04 19:52:21] 2024-11-05 00:51:56,253 | INFO     |  -- lfn=log.41843965._003471.job.log.tgz.1, status_code=0, status=transferred
[2024-11-04 19:52:21] 2024-11-05 00:51:56,254 | INFO     | stage-out finished correctly
[2024-11-04 19:52:21] 2024-11-05 00:51:56,326 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-11-04 19:52:21] 2024-11-05 00:51:56,885 | INFO     | monitor loop #343: job 0:6390081079 is in state 'finished'
[2024-11-04 19:52:21] 2024-11-05 00:51:56,885 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-11-04 19:52:21] 2024-11-05 00:51:57,179 | INFO     | job 6390081079 has state=finished
[2024-11-04 19:52:21] 2024-11-05 00:51:57,180 | INFO     | preparing for final server update for job 6390081079 in state='finished'
[2024-11-04 19:52:21] 2024-11-05 00:51:57,180 | INFO     | this job has now completed (state=finished)
[2024-11-04 19:52:21] 2024-11-05 00:51:57,181 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-11-04 19:52:21] 2024-11-05 00:51:57,181 | INFO     | log transfer has been attempted: DONE
[2024-11-04 19:52:21] 2024-11-05 00:51:57,181 | INFO     | job 6390081079 has finished - writing final server update
[2024-11-04 19:52:21] 2024-11-05 00:51:57,181 | INFO     | total number of processed events: 50 (read)
[2024-11-04 19:52:21] 2024-11-05 00:51:57,185 | INFO     | executing command: lscpu
[2024-11-04 19:52:21] 2024-11-05 00:51:57,224 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-11-04 19:52:21] 2024-11-05 00:51:57,247 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-11-04 19:52:21] 2024-11-05 00:51:57,721 | INFO     | 4459s have passed since pilot start
[2024-11-04 19:52:21] 2024-11-05 00:51:59,387 | INFO     | monitor loop #344: job 0:6390081079 is in state 'finished'
[2024-11-04 19:52:21] 2024-11-05 00:51:59,388 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-11-04 19:52:21] 2024-11-05 00:52:01,726 | INFO     | CPU arch script returned: x86-64-v3
[2024-11-04 19:52:21] 2024-11-05 00:52:01,727 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6390081079/memory_monitor_summary.json (trf name=prmon)
[2024-11-04 19:52:21] 2024-11-05 00:52:01,728 | INFO     | extracted standard info from prmon json
[2024-11-04 19:52:21] 2024-11-05 00:52:01,728 | INFO     | extracted standard memory fields from prmon json
[2024-11-04 19:52:21] 2024-11-05 00:52:01,728 | WARNING  | GPU info not found in prmon json: 'gpu'
[2024-11-04 19:52:21] 2024-11-05 00:52:01,729 | INFO     | fitting pss+swap vs Time
[2024-11-04 19:52:21] 2024-11-05 00:52:01,729 | INFO     | model: linear, x: [1730763831.0, 1730763892.0, 1730763953.0, 1730764014.0, 1730764075.0, 1730764136.0, 1730764197.0, 1730764258.0, 1730764319.0, 1730764380.0, 1730
[2024-11-04 19:52:21] 2024-11-05 00:52:01,730 | INFO     | sum of square deviations: 85141606.8615385
[2024-11-04 19:52:21] 2024-11-05 00:52:01,730 | INFO     | sum of deviations: 34373304616.276924
[2024-11-04 19:52:21] 2024-11-05 00:52:01,730 | INFO     | mean x: 1730765783.0461538
[2024-11-04 19:52:21] 2024-11-05 00:52:01,730 | INFO     | mean y: 1625743.9076923076
[2024-11-04 19:52:21] 2024-11-05 00:52:01,730 | INFO     | -- intersect: -698741816775.6066
[2024-11-04 19:52:21] 2024-11-05 00:52:01,730 | INFO     | intersect: -698741816775.6066
[2024-11-04 19:52:21] 2024-11-05 00:52:01,730 | INFO     | chi2: 7.828195758849055
[2024-11-04 19:52:21] 2024-11-05 00:52:01,730 | INFO     | -- intersect: -698741816775.6066
[2024-11-04 19:52:21] 2024-11-05 00:52:01,730 | INFO     | current memory leak: 403.72 B/s (using 65 data points, chi2=7.83)
[2024-11-04 19:52:21] 2024-11-05 00:52:01,731 | INFO     | ..............................
[2024-11-04 19:52:21] 2024-11-05 00:52:01,731 | INFO     | . Timing measurements:
[2024-11-04 19:52:21] 2024-11-05 00:52:01,731 | INFO     | . get job = 0 s
[2024-11-04 19:52:21] 2024-11-05 00:52:01,731 | INFO     | . initial setup = 2 s
[2024-11-04 19:52:21] 2024-11-05 00:52:01,731 | INFO     | . payload setup = 12 s
[2024-11-04 19:52:21] 2024-11-05 00:52:01,731 | INFO     | . stage-in = 0 s
[2024-11-04 19:52:21] 2024-11-05 00:52:01,731 | INFO     | . payload execution = 4404 s
[2024-11-04 19:52:21] 2024-11-05 00:52:01,731 | INFO     | . stage-out = 0 s
[2024-11-04 19:52:21] 2024-11-05 00:52:01,731 | INFO     | . log creation = 0 s
[2024-11-04 19:52:21] 2024-11-05 00:52:01,731 | INFO     | ..............................
[2024-11-04 19:52:21] 2024-11-05 00:52:01,805 | INFO     | 
[2024-11-04 19:52:21] 2024-11-05 00:52:01,805 | INFO     | job summary report
[2024-11-04 19:52:21] 2024-11-05 00:52:01,805 | INFO     | --------------------------------------------------
[2024-11-04 19:52:21] 2024-11-05 00:52:01,805 | INFO     | PanDA job id: 6390081079
[2024-11-04 19:52:21] 2024-11-05 00:52:01,806 | INFO     | task id: 41843965
[2024-11-04 19:52:21] 2024-11-05 00:52:01,806 | INFO     | errors: (none)
[2024-11-04 19:52:21] 2024-11-05 00:52:01,806 | INFO     | status: LOG_TRANSFER = DONE 
[2024-11-04 19:52:21] 2024-11-05 00:52:01,806 | INFO     | pilot state: finished 
[2024-11-04 19:52:21] 2024-11-05 00:52:01,806 | INFO     | transexitcode: 0
[2024-11-04 19:52:21] 2024-11-05 00:52:01,806 | INFO     | exeerrorcode: 0
[2024-11-04 19:52:21] 2024-11-05 00:52:01,806 | INFO     | exeerrordiag: 
[2024-11-04 19:52:21] 2024-11-05 00:52:01,806 | INFO     | exitcode: 0
[2024-11-04 19:52:21] 2024-11-05 00:52:01,806 | INFO     | exitmsg: OK
[2024-11-04 19:52:21] 2024-11-05 00:52:01,806 | INFO     | cpuconsumptiontime: 10692 s
[2024-11-04 19:52:21] 2024-11-05 00:52:01,806 | INFO     | nevents: 50
[2024-11-04 19:52:21] 2024-11-05 00:52:01,806 | INFO     | neventsw: 0
[2024-11-04 19:52:21] 2024-11-05 00:52:01,806 | INFO     | pid: 84250
[2024-11-04 19:52:21] 2024-11-05 00:52:01,806 | INFO     | pgrp: 84250
[2024-11-04 19:52:21] 2024-11-05 00:52:01,806 | INFO     | corecount: 8
[2024-11-04 19:52:21] 2024-11-05 00:52:01,806 | INFO     | event service: False
[2024-11-04 19:52:21] 2024-11-05 00:52:01,806 | INFO     | sizes: {0: 2413057, 1: 2413256, 11: 2413490, 22: 2413490, 4421: 2440285, 4423: 2449489, 4428: 2449655}
[2024-11-04 19:52:21] 2024-11-05 00:52:01,806 | INFO     | --------------------------------------------------
[2024-11-04 19:52:21] 2024-11-05 00:52:01,807 | INFO     | 
[2024-11-04 19:52:21] 2024-11-05 00:52:01,807 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2024-11-04 19:52:21] 2024-11-05 00:52:01,827 | INFO     | queue jobs had 0 job(s) [purged]
[2024-11-04 19:52:21] 2024-11-05 00:52:01,828 | INFO     | queue payloads had 0 job(s) [purged]
[2024-11-04 19:52:21] 2024-11-05 00:52:01,828 | INFO     | queue data_in had 0 job(s) [purged]
[2024-11-04 19:52:21] 2024-11-05 00:52:01,828 | INFO     | queue data_out had 0 job(s) [purged]
[2024-11-04 19:52:21] 2024-11-05 00:52:01,828 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-11-04 19:52:21] 2024-11-05 00:52:01,828 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-11-04 19:52:21] 2024-11-05 00:52:01,828 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-11-04 19:52:21] 2024-11-05 00:52:01,828 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-11-04 19:52:21] 2024-11-05 00:52:01,828 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-11-04 19:52:21] 2024-11-05 00:52:01,828 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-11-04 19:52:21] 2024-11-05 00:52:01,828 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-11-04 19:52:21] 2024-11-05 00:52:01,828 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-11-04 19:52:21] 2024-11-05 00:52:01,828 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-11-04 19:52:21] 2024-11-05 00:52:01,828 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-11-04 19:52:21] 2024-11-05 00:52:01,828 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-11-04 19:52:21] 2024-11-05 00:52:01,828 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-11-04 19:52:21] 2024-11-05 00:52:01,829 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-11-04 19:52:21] 2024-11-05 00:52:01,829 | INFO     | queue completed_jobids has 1 job(s)
[2024-11-04 19:52:21] 2024-11-05 00:52:01,829 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-11-04 19:52:21] 2024-11-05 00:52:01,829 | INFO     | queue messages had 0 job(s) [purged]
[2024-11-04 19:52:21] 2024-11-05 00:52:01,829 | INFO     | job 6390081079 has completed (purged errors)
[2024-11-04 19:52:21] 2024-11-05 00:52:01,829 | INFO     | overall cleanup function is called
[2024-11-04 19:52:21] 2024-11-05 00:52:02,839 | INFO     | --- collectZombieJob: --- 10, [84250]
[2024-11-04 19:52:21] 2024-11-05 00:52:02,840 | INFO     | zombie collector waiting for pid 84250
[2024-11-04 19:52:21] 2024-11-05 00:52:02,840 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-11-04 19:52:21] 2024-11-05 00:52:02,840 | INFO     | collected zombie processes
[2024-11-04 19:52:21] 2024-11-05 00:52:02,840 | INFO     | will attempt to kill all subprocesses of pid=84250
[2024-11-04 19:52:21] 2024-11-05 00:52:03,051 | INFO     | process IDs to be killed: [84250] (in reverse order)
[2024-11-04 19:52:21] 2024-11-05 00:52:03,172 | WARNING  | found no corresponding commands to process id(s)
[2024-11-04 19:52:21] 2024-11-05 00:52:03,173 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-11-04 19:52:21] 2024-11-05 00:52:03,184 | INFO     | did not find any defunct processes belonging to 84250
[2024-11-04 19:52:21] 2024-11-05 00:52:03,194 | INFO     | did not find any defunct processes belonging to 84250
[2024-11-04 19:52:21] 2024-11-05 00:52:03,194 | INFO     | ready for new job
[2024-11-04 19:52:21] 2024-11-05 00:52:03,194 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-11-04 19:52:21] 2024-11-05 00:52:03,195 | INFO     | **************************************
[2024-11-04 19:52:21] 2024-11-05 00:52:03,195 | INFO     | ***  PanDA Pilot version 3.9.1.13  ***
[2024-11-04 19:52:21] 2024-11-05 00:52:03,195 | INFO     | **************************************
[2024-11-04 19:52:21] 2024-11-05 00:52:03,195 | INFO     | 
[2024-11-04 19:52:21] 2024-11-05 00:52:03,200 | INFO     | architecture information:
[2024-11-04 19:52:21] 2024-11-05 00:52:03,200 | INFO     | executing command: cat /etc/os-release
[2024-11-04 19:52:21] 2024-11-05 00:52:03,217 | INFO     | cat /etc/os-release:
[2024-11-04 19:52:21] NAME="CentOS Linux"
[2024-11-04 19:52:21] VERSION="7 (Core)"
[2024-11-04 19:52:21] ID="centos"
[2024-11-04 19:52:21] ID_LIKE="rhel fedora"
[2024-11-04 19:52:21] VERSION_ID="7"
[2024-11-04 19:52:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-11-04 19:52:21] ANSI_COLOR="0;31"
[2024-11-04 19:52:21] CPE_NAME="cpe:/o:centos:centos:7"
[2024-11-04 19:52:21] HOME_URL="https://www.centos.org/"
[2024-11-04 19:52:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-11-04 19:52:21] 
[2024-11-04 19:52:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-11-04 19:52:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-11-04 19:52:21] REDHAT_SUPPORT_PRODUCT="centos"
[2024-11-04 19:52:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-11-04 19:52:21] 
[2024-11-04 19:52:21] 2024-11-05 00:52:03,217 | INFO     | **************************************
[2024-11-04 19:52:21] 2024-11-05 00:52:03,720 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2024-11-04 19:52:21] 2024-11-05 00:52:03,739 | INFO     | sufficient remaining disk space (102468943872 B)
[2024-11-04 19:52:21] 2024-11-05 00:52:03,739 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-11-04 19:52:21] 2024-11-05 00:52:03,739 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-11-04 19:52:21] 2024-11-05 00:52:03,740 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-11-04 19:52:21] 2024-11-05 00:52:03,740 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-11-04 19:52:21] 2024-11-05 00:52:03,740 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-11-04 19:52:21] 2024-11-05 00:52:03,741 | INFO     | aborting loop
[2024-11-04 19:52:21] 2024-11-05 00:52:03,741 | INFO     | found 0 job(s) in 20 queues
[2024-11-04 19:52:21] 2024-11-05 00:52:03,741 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-11-04 19:52:21] 2024-11-05 00:52:03,741 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-11-04 19:52:21] 2024-11-05 00:52:03,764 | INFO     | all job control threads have been joined
[2024-11-04 19:52:21] 2024-11-05 00:52:03,812 | INFO     | all payload control threads have been joined
[2024-11-04 19:52:21] 2024-11-05 00:52:04,340 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-11-04 19:52:21] 2024-11-05 00:52:04,484 | INFO     | all data control threads have been joined
[2024-11-04 19:52:21] 2024-11-05 00:52:04,745 | INFO     | [job] retrieve thread has finished
[2024-11-04 19:52:21] 2024-11-05 00:52:04,745 | INFO     | [job] job monitor thread has finished
[2024-11-04 19:52:21] 2024-11-05 00:52:04,747 | INFO     | [job] queue monitor thread has finished
[2024-11-04 19:52:21] 2024-11-05 00:52:04,769 | INFO     | [job] control thread has finished
[2024-11-04 19:52:21] 2024-11-05 00:52:04,818 | INFO     | [payload] control thread has finished
[2024-11-04 19:52:21] 2024-11-05 00:52:05,109 | INFO     | [data] copytool_in thread has finished
[2024-11-04 19:52:21] 2024-11-05 00:52:05,373 | INFO     | [payload] failed_post thread has finished
[2024-11-04 19:52:21] 2024-11-05 00:52:05,494 | INFO     | [data] control thread has finished
[2024-11-04 19:52:21] 2024-11-05 00:52:05,678 | INFO     | [payload] validate_post thread has finished
[2024-11-04 19:52:21] 2024-11-05 00:52:05,820 | INFO     | [job] validate thread has finished
[2024-11-04 19:52:21] 2024-11-05 00:52:05,940 | INFO     | [job] create_data_payload thread has finished
[2024-11-04 19:52:21] 2024-11-05 00:52:06,144 | INFO     | [payload] execute_payloads thread has finished
[2024-11-04 19:52:21] 2024-11-05 00:52:06,170 | INFO     | [payload] validate_pre thread has finished
[2024-11-04 19:52:21] 2024-11-05 00:52:06,345 | INFO     | [data] copytool_out thread has finished
[2024-11-04 19:52:21] 2024-11-05 00:52:06,908 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-11-04 19:52:21] 2024-11-05 00:52:10,916 | INFO     | [data] queue_monitor thread has finished
[2024-11-04 19:52:21] 2024-11-05 00:52:14,283 | INFO     | job.realtimelogging is not enabled
[2024-11-04 19:52:21] 2024-11-05 00:52:15,288 | INFO     | [payload] run_realtimelog thread has finished
[2024-11-04 19:52:21] 2024-11-05 00:52:16,489 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139631903733568)>', '<ExcThread(monitor, started 139631165159168)>']
[2024-11-04 19:52:21] 2024-11-05 00:52:16,808 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-11-04 19:52:21] 2024-11-05 00:52:16,809 | INFO     | [monitor] control thread has ended
[2024-11-04 19:52:21] 2024-11-05 00:52:21,515 | INFO     | all workflow threads have been joined
[2024-11-04 19:52:21] 2024-11-05 00:52:21,515 | INFO     | end of generic workflow (traces error code: 0)
[2024-11-04 19:52:21] 2024-11-05 00:52:21,515 | INFO     | traces error code: 0
[2024-11-04 19:52:21] 2024-11-05 00:52:21,515 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-11-04 19:52:21] 2024-11-05 00:52:21,669 [wrapper] ==== pilot stdout END ====
[2024-11-04 19:52:21] 2024-11-05 00:52:21,671 [wrapper] ==== wrapper stdout RESUME ====
[2024-11-04 19:52:21] 2024-11-05 00:52:21,672 [wrapper] pilotpid: 68987
[2024-11-04 19:52:21] 2024-11-05 00:52:21,673 [wrapper] Pilot exit status: 0
[2024-11-04 19:52:21] 2024-11-05 00:52:21,683 [wrapper] pandaids: 6390081079
[2024-11-04 19:52:21] 2024-11-05 00:52:21,770 [wrapper] cleanup supervisor_pilot 12440 68988
[2024-11-04 19:52:21] 2024-11-05 00:52:21,773 [wrapper] Test setup, not cleaning
[2024-11-04 19:52:21] 2024-11-05 00:52:21,775 [wrapper] ==== wrapper stdout END ====
[2024-11-04 19:52:21] 2024-11-05 00:52:21,776 [wrapper] ==== wrapper stderr END ====
[2024-11-04 19:52:21] 2024-11-05 00:52:21,780 [wrapper] apfmon messages muted
[2024-11-04 19:52:21]  *** Error codes and diagnostics ***
[2024-11-04 19:52:21]     "exeErrorCode": 0,
[2024-11-04 19:52:21]     "exeErrorDiag": "",
[2024-11-04 19:52:21]     "pilotErrorCode": 0,
[2024-11-04 19:52:21]     "pilotErrorDiag": "",
[2024-11-04 19:52:21]  *** Listing of results directory ***
[2024-11-04 19:52:21] total 431940
[2024-11-04 19:52:21] -rw-r--r-- 1 boincer umatlas    486088 Nov  4 17:42 pilot3.tar.gz
[2024-11-04 19:52:21] -rw-r--r-- 1 boincer umatlas      5652 Nov  4 17:53 queuedata.json
[2024-11-04 19:52:21] -rwx------ 1 boincer umatlas     34589 Nov  4 17:54 runpilot2-wrapper.sh
[2024-11-04 19:52:21] -rw-r--r-- 1 boincer umatlas       100 Nov  4 18:37 wrapper_26015_x86_64-pc-linux-gnu
[2024-11-04 19:52:21] -rwxr-xr-x 1 boincer umatlas      7986 Nov  4 18:37 run_atlas
[2024-11-04 19:52:21] -rw-r--r-- 1 boincer umatlas       105 Nov  4 18:37 job.xml
[2024-11-04 19:52:21] -rw-r--r-- 2 boincer umatlas     17569 Nov  4 18:37 start_atlas.sh
[2024-11-04 19:52:21] drwxrwx--x 2 boincer umatlas      4096 Nov  4 18:37 shared
[2024-11-04 19:52:21] -rw-r--r-- 2 boincer umatlas    499924 Nov  4 18:37 input.tar.gz
[2024-11-04 19:52:21] -rw-r--r-- 2 boincer umatlas 385056546 Nov  4 18:37 EVNT.41779548._000008.pool.root.1
[2024-11-04 19:52:21] -rw-r--r-- 1 boincer umatlas         0 Nov  4 18:37 boinc_lockfile
[2024-11-04 19:52:21] -rw-r--r-- 1 boincer umatlas      2888 Nov  4 18:37 pandaJob.out
[2024-11-04 19:52:21] -rw------- 1 boincer umatlas       467 Nov  4 18:37 setup.sh.local
[2024-11-04 19:52:21] -rw------- 1 boincer umatlas   1026525 Nov  4 18:37 agis_schedconf.cvmfs.json
[2024-11-04 19:52:21] -rw------- 1 boincer umatlas   1602446 Nov  4 18:37 agis_ddmendpoints.agis.ALL.json
[2024-11-04 19:52:21] drwx------ 4 boincer umatlas      4096 Nov  4 18:37 pilot3
[2024-11-04 19:52:21] -rw-r--r-- 1 boincer umatlas       529 Nov  4 19:41 boinc_task_state.xml
[2024-11-04 19:52:21] -rw-r--r-- 1 boincer umatlas      6387 Nov  4 19:48 init_data.xml
[2024-11-04 19:52:21] -rw------- 1 boincer umatlas  50162033 Nov  4 19:51 HITS.41843965._003471.pool.root.1
[2024-11-04 19:52:21] -rw------- 1 boincer umatlas      1075 Nov  4 19:51 memory_monitor_summary.json
[2024-11-04 19:52:21] -rw------- 1 boincer umatlas        95 Nov  4 19:51 pilot_heartbeat.json
[2024-11-04 19:52:21] -rw------- 1 boincer umatlas   1187771 Nov  4 19:51 log.41843965._003471.job.log.tgz.1
[2024-11-04 19:52:21] -rw------- 1 boincer umatlas      8551 Nov  4 19:52 heartbeat.json
[2024-11-04 19:52:21] -rw-r--r-- 1 boincer umatlas      8192 Nov  4 19:52 boinc_mmap_file
[2024-11-04 19:52:21] -rw-r--r-- 1 boincer umatlas        26 Nov  4 19:52 wrapper_checkpoint.txt
[2024-11-04 19:52:21] -rw------- 1 boincer umatlas      4411 Nov  4 19:52 pilotlog.txt
[2024-11-04 19:52:21] -rw------- 1 boincer umatlas    428120 Nov  4 19:52 log.41843965._003471.job.log.1
[2024-11-04 19:52:21] -rw------- 1 boincer umatlas       353 Nov  4 19:52 output.list
[2024-11-04 19:52:21] -rw-r--r-- 1 boincer umatlas       620 Nov  4 19:52 runtime_log
[2024-11-04 19:52:21] -rw------- 1 boincer umatlas   1638400 Nov  4 19:52 result.tar.gz
[2024-11-04 19:52:21] -rw------- 1 boincer umatlas       659 Nov  4 19:52 tbhKDmQ9KS6n9Rq4apOajLDm4fhM0noT9bVorHsSDm2f0LDmpezwzn.diag
[2024-11-04 19:52:21] -rw-r--r-- 1 boincer umatlas     11418 Nov  4 19:52 runtime_log.err
[2024-11-04 19:52:21] -rw-r--r-- 1 boincer umatlas     21268 Nov  4 19:52 stderr.txt
[2024-11-04 19:52:21] HITS file was successfully produced:
[2024-11-04 19:52:21] -rw------- 1 boincer umatlas 50162033 Nov  4 19:51 shared/HITS.pool.root.1
[2024-11-04 19:52:21]  *** Contents of shared directory: ***
[2024-11-04 19:52:22] total 427132
[2024-11-04 19:52:22] -rw-r--r-- 2 boincer umatlas     17569 Nov  4 18:37 start_atlas.sh
[2024-11-04 19:52:22] -rw-r--r-- 2 boincer umatlas    499924 Nov  4 18:37 input.tar.gz
[2024-11-04 19:52:22] -rw-r--r-- 2 boincer umatlas 385056546 Nov  4 18:37 ATLAS.root_0
[2024-11-04 19:52:22] -rw------- 1 boincer umatlas  50162033 Nov  4 19:51 HITS.pool.root.1
[2024-11-04 19:52:22] -rw------- 1 boincer umatlas   1638400 Nov  4 19:52 result.tar.gz
19:52:23 (56780): run_atlas exited; CPU time 10341.822771
19:52:23 (56780): called boinc_finish(0)

</stderr_txt>
]]>

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