Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
19:53:11 (62895): wrapper (7.7.26015): starting
19:53:11 (62895): wrapper: running run_atlas (--nthreads 8)
[2024-11-03 19:53:11] Arguments: --nthreads 8
[2024-11-03 19:53:11] Threads: 8
[2024-11-03 19:53:11] Checking for CVMFS
[2024-11-03 19:53:11] Probing /cvmfs/atlas.cern.ch... OK
[2024-11-03 19:53:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-11-03 19:53:11] Running cvmfs_config stat atlas.cern.ch
[2024-11-03 19:53:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-11-03 19:53:12] 2.11.2.0 294477 6504 267248 139074 0 139 13513925 18432000 11892 130560 4 69360776 99.597 67067362 39130 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-11-03 19:53:12] CVMFS is ok
[2024-11-03 19:53:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-11-03 19:53:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-11-03 19:53:12] Further information can be found at the LHC@home message board.
[2024-11-03 19:53:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-11-03 19:53:12] Checking for apptainer binary...
[2024-11-03 19:53:12] Using apptainer found in PATH at /usr/bin/apptainer
[2024-11-03 19:53:12] Running /usr/bin/apptainer --version
[2024-11-03 19:53:12] apptainer version 1.3.2-1.el7
[2024-11-03 19:53:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-11-03 19:53:12] c-211-35-1.aglt2.org
[2024-11-03 19:53:12] apptainer works
[2024-11-03 19:53:12] Set ATHENA_PROC_NUMBER=8
[2024-11-03 19:53:12] Set ATHENA_CORE_NUMBER=8
[2024-11-03 19:53:12] Starting ATLAS job with PandaID=6389081763
[2024-11-03 19:53:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-11-03 20:43:46]  *** The last 200 lines of the pilot log: ***
[2024-11-03 20:43:46]  domain=
[2024-11-03 20:43:46]  filesize=1176375
[2024-11-03 20:43:46]  filetype=log
[2024-11-03 20:43:46]  guid=9bbbf75f-b3ec-4778-b9e6-0e5d9fd69cf5
[2024-11-03 20:43:46]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-11-03 20:43:46]  is_altstaged=None
[2024-11-03 20:43:46]  is_tar=False
[2024-11-03 20:43:46]  lfn=log.41843851._005256.job.log.tgz.1
[2024-11-03 20:43:46]  mtime=0
[2024-11-03 20:43:46]  protocol_id=None
[2024-11-03 20:43:46]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-11-03 20:43:46]  replicas=None
[2024-11-03 20:43:46]  scope=mc16_13TeV
[2024-11-03 20:43:46]  status=None
[2024-11-03 20:43:46]  status_code=0
[2024-11-03 20:43:46]  storage_token=
[2024-11-03 20:43:46]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6389081763/log.41843851._005256.job.log.tgz.1
[2024-11-03 20:43:46]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/a4/62/log.41843851._005256.job.log.tgz.1
[2024-11-03 20:43:46]  workdir=None
[2024-11-03 20:43:46] ]
[2024-11-03 20:43:46] 2024-11-04 01:43:18,729 | INFO     | transferring file log.41843851._005256.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6389081763/log.41843851._005256.job.log.tgz.1 to /tmp/boinchome/slots/
[2024-11-03 20:43:46] 2024-11-04 01:43:18,729 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6389081763/log.41843851._005256.job.log.tgz.1 /tmp/boinchome/slots/2/log.41843851._005256.job
[2024-11-03 20:43:46] 2024-11-04 01:43:18,756 | INFO     | adding to output.list: log.41843851._005256.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/a4/62/log.41843851._005256.job.log.tgz.
[2024-11-03 20:43:46] 2024-11-04 01:43:18,757 | INFO     | alt stage-out settings: ['pl', 'pw', 'w', 'default'], is_unified=False, altstageout=False, remain_files=0, has_altstorage=True
[2024-11-03 20:43:46] 2024-11-04 01:43:18,757 | INFO     | summary of transferred files:
[2024-11-03 20:43:46] 2024-11-04 01:43:18,757 | INFO     |  -- lfn=log.41843851._005256.job.log.tgz.1, status_code=0, status=transferred
[2024-11-03 20:43:46] 2024-11-04 01:43:18,757 | INFO     | stage-out finished correctly
[2024-11-03 20:43:46] 2024-11-04 01:43:20,178 | WARNING  | process 75141 is no longer using CPU - aborting
[2024-11-03 20:43:46] 2024-11-04 01:43:22,260 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-11-03 20:43:46] 2024-11-04 01:43:22,682 | INFO     | monitor loop #236: job 0:6389081763 is in state 'finished'
[2024-11-03 20:43:46] 2024-11-04 01:43:22,682 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-11-03 20:43:46] 2024-11-04 01:43:23,547 | INFO     | job 6389081763 has state=finished
[2024-11-03 20:43:46] 2024-11-04 01:43:23,547 | INFO     | preparing for final server update for job 6389081763 in state='finished'
[2024-11-03 20:43:46] 2024-11-04 01:43:23,548 | INFO     | this job has now completed (state=finished)
[2024-11-03 20:43:46] 2024-11-04 01:43:23,548 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-11-03 20:43:46] 2024-11-04 01:43:23,548 | INFO     | log transfer has been attempted: DONE
[2024-11-03 20:43:46] 2024-11-04 01:43:23,548 | INFO     | job 6389081763 has finished - writing final server update
[2024-11-03 20:43:46] 2024-11-04 01:43:23,549 | INFO     | total number of processed events: 50 (read)
[2024-11-03 20:43:46] 2024-11-04 01:43:23,556 | INFO     | executing command: lscpu
[2024-11-03 20:43:46] 2024-11-04 01:43:23,630 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-11-03 20:43:46] 2024-11-04 01:43:23,663 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-11-03 20:43:46] 2024-11-04 01:43:25,185 | INFO     | monitor loop #237: job 0:6389081763 is in state 'finished'
[2024-11-03 20:43:46] 2024-11-04 01:43:25,186 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-11-03 20:43:46] 2024-11-04 01:43:26,847 | INFO     | CPU arch script returned: x86-64-v4
[2024-11-03 20:43:46] 2024-11-04 01:43:26,848 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6389081763/memory_monitor_summary.json (trf name=prmon)
[2024-11-03 20:43:46] 2024-11-04 01:43:26,849 | INFO     | extracted standard info from prmon json
[2024-11-03 20:43:46] 2024-11-04 01:43:26,849 | INFO     | extracted standard memory fields from prmon json
[2024-11-03 20:43:46] 2024-11-04 01:43:26,849 | WARNING  | GPU info not found in prmon json: 'gpu'
[2024-11-03 20:43:46] 2024-11-04 01:43:26,851 | INFO     | fitting pss+swap vs Time
[2024-11-03 20:43:46] 2024-11-04 01:43:26,852 | INFO     | model: linear, x: [1730681928.0, 1730681989.0, 1730682050.0, 1730682111.0, 1730682172.0, 1730682233.0, 1730682294.0, 1730682355.0, 1730682416.0, 1730682477.0, 1730
[2024-11-03 20:43:46] 2024-11-04 01:43:26,852 | INFO     | sum of square deviations: 22960430.5
[2024-11-03 20:43:46] 2024-11-04 01:43:26,852 | INFO     | sum of deviations: 10959046439.000002
[2024-11-03 20:43:46] 2024-11-04 01:43:26,852 | INFO     | mean x: 1730683178.5
[2024-11-03 20:43:46] 2024-11-04 01:43:26,852 | INFO     | mean y: 1338041.7142857143
[2024-11-03 20:43:46] 2024-11-04 01:43:26,853 | INFO     | -- intersect: -826056227576.5624
[2024-11-03 20:43:46] 2024-11-04 01:43:26,853 | INFO     | intersect: -826056227576.5624
[2024-11-03 20:43:46] 2024-11-04 01:43:26,853 | INFO     | chi2: 6.0816983867250505
[2024-11-03 20:43:46] 2024-11-04 01:43:26,853 | INFO     | -- intersect: -826056227576.5624
[2024-11-03 20:43:46] 2024-11-04 01:43:26,853 | INFO     | current memory leak: 477.30 B/s (using 42 data points, chi2=6.08)
[2024-11-03 20:43:46] 2024-11-04 01:43:26,854 | INFO     | ..............................
[2024-11-03 20:43:46] 2024-11-04 01:43:26,854 | INFO     | . Timing measurements:
[2024-11-03 20:43:46] 2024-11-04 01:43:26,854 | INFO     | . get job = 0 s
[2024-11-03 20:43:46] 2024-11-04 01:43:26,854 | INFO     | . initial setup = 2 s
[2024-11-03 20:43:46] 2024-11-04 01:43:26,854 | INFO     | . payload setup = 4 s
[2024-11-03 20:43:46] 2024-11-04 01:43:26,854 | INFO     | . stage-in = 0 s
[2024-11-03 20:43:46] 2024-11-04 01:43:26,854 | INFO     | . payload execution = 2974 s
[2024-11-03 20:43:46] 2024-11-04 01:43:26,855 | INFO     | . stage-out = 0 s
[2024-11-03 20:43:46] 2024-11-04 01:43:26,855 | INFO     | . log creation = 0 s
[2024-11-03 20:43:46] 2024-11-04 01:43:26,855 | INFO     | ..............................
[2024-11-03 20:43:46] 2024-11-04 01:43:26,945 | INFO     | 
[2024-11-03 20:43:46] 2024-11-04 01:43:26,945 | INFO     | job summary report
[2024-11-03 20:43:46] 2024-11-04 01:43:26,946 | INFO     | --------------------------------------------------
[2024-11-03 20:43:46] 2024-11-04 01:43:26,946 | INFO     | PanDA job id: 6389081763
[2024-11-03 20:43:46] 2024-11-04 01:43:26,946 | INFO     | task id: 41843851
[2024-11-03 20:43:46] 2024-11-04 01:43:26,946 | INFO     | errors: (none)
[2024-11-03 20:43:46] 2024-11-04 01:43:26,946 | INFO     | status: LOG_TRANSFER = DONE 
[2024-11-03 20:43:46] 2024-11-04 01:43:26,946 | INFO     | pilot state: finished 
[2024-11-03 20:43:46] 2024-11-04 01:43:26,946 | INFO     | transexitcode: 0
[2024-11-03 20:43:46] 2024-11-04 01:43:26,946 | INFO     | exeerrorcode: 0
[2024-11-03 20:43:46] 2024-11-04 01:43:26,947 | INFO     | exeerrordiag: 
[2024-11-03 20:43:46] 2024-11-04 01:43:26,947 | INFO     | exitcode: 0
[2024-11-03 20:43:46] 2024-11-04 01:43:26,947 | INFO     | exitmsg: OK
[2024-11-03 20:43:46] 2024-11-04 01:43:26,947 | INFO     | cpuconsumptiontime: 5649 s
[2024-11-03 20:43:46] 2024-11-04 01:43:26,947 | INFO     | nevents: 50
[2024-11-03 20:43:46] 2024-11-04 01:43:26,947 | INFO     | neventsw: 0
[2024-11-03 20:43:46] 2024-11-04 01:43:26,947 | INFO     | pid: 75141
[2024-11-03 20:43:46] 2024-11-04 01:43:26,947 | INFO     | pgrp: 75141
[2024-11-03 20:43:46] 2024-11-04 01:43:26,947 | INFO     | corecount: 8
[2024-11-03 20:43:46] 2024-11-04 01:43:26,948 | INFO     | event service: False
[2024-11-03 20:43:46] 2024-11-04 01:43:26,948 | INFO     | sizes: {0: 2412971, 1: 2413226, 4: 2413432, 12: 2413460, 2982: 2439628, 2983: 2448648, 2987: 2448832, 2991: 2449054}
[2024-11-03 20:43:46] 2024-11-04 01:43:26,948 | INFO     | --------------------------------------------------
[2024-11-03 20:43:46] 2024-11-04 01:43:26,948 | INFO     | 
[2024-11-03 20:43:46] 2024-11-04 01:43:26,948 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2024-11-03 20:43:46] 2024-11-04 01:43:26,972 | INFO     | queue jobs had 0 job(s) [purged]
[2024-11-03 20:43:46] 2024-11-04 01:43:26,972 | INFO     | queue payloads had 0 job(s) [purged]
[2024-11-03 20:43:46] 2024-11-04 01:43:26,973 | INFO     | queue data_in had 0 job(s) [purged]
[2024-11-03 20:43:46] 2024-11-04 01:43:26,973 | INFO     | queue data_out had 0 job(s) [purged]
[2024-11-03 20:43:46] 2024-11-04 01:43:26,973 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-11-03 20:43:46] 2024-11-04 01:43:26,973 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-11-03 20:43:46] 2024-11-04 01:43:26,973 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-11-03 20:43:46] 2024-11-04 01:43:26,973 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-11-03 20:43:46] 2024-11-04 01:43:26,973 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-11-03 20:43:46] 2024-11-04 01:43:26,973 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-11-03 20:43:46] 2024-11-04 01:43:26,973 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-11-03 20:43:46] 2024-11-04 01:43:26,973 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-11-03 20:43:46] 2024-11-04 01:43:26,973 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-11-03 20:43:46] 2024-11-04 01:43:26,974 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-11-03 20:43:46] 2024-11-04 01:43:26,974 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-11-03 20:43:46] 2024-11-04 01:43:26,974 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-11-03 20:43:46] 2024-11-04 01:43:26,974 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-11-03 20:43:46] 2024-11-04 01:43:26,974 | INFO     | queue completed_jobids has 1 job(s)
[2024-11-03 20:43:46] 2024-11-04 01:43:26,974 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-11-03 20:43:46] 2024-11-04 01:43:26,974 | INFO     | queue messages had 0 job(s) [purged]
[2024-11-03 20:43:46] 2024-11-04 01:43:26,974 | INFO     | job 6389081763 has completed (purged errors)
[2024-11-03 20:43:46] 2024-11-04 01:43:26,975 | INFO     | overall cleanup function is called
[2024-11-03 20:43:46] 2024-11-04 01:43:27,989 | INFO     | --- collectZombieJob: --- 10, [75141]
[2024-11-03 20:43:46] 2024-11-04 01:43:27,989 | INFO     | zombie collector waiting for pid 75141
[2024-11-03 20:43:46] 2024-11-04 01:43:27,989 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-11-03 20:43:46] 2024-11-04 01:43:27,989 | INFO     | collected zombie processes
[2024-11-03 20:43:46] 2024-11-04 01:43:27,989 | INFO     | will attempt to kill all subprocesses of pid=75141
[2024-11-03 20:43:46] 2024-11-04 01:43:28,141 | INFO     | process IDs to be killed: [75141] (in reverse order)
[2024-11-03 20:43:46] 2024-11-04 01:43:28,226 | WARNING  | found no corresponding commands to process id(s)
[2024-11-03 20:43:46] 2024-11-04 01:43:28,227 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-11-03 20:43:46] 2024-11-04 01:43:28,240 | INFO     | did not find any defunct processes belonging to 75141
[2024-11-03 20:43:46] 2024-11-04 01:43:28,250 | INFO     | did not find any defunct processes belonging to 75141
[2024-11-03 20:43:46] 2024-11-04 01:43:28,250 | INFO     | ready for new job
[2024-11-03 20:43:46] 2024-11-04 01:43:28,250 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-11-03 20:43:46] 2024-11-04 01:43:28,252 | INFO     | **************************************
[2024-11-03 20:43:46] 2024-11-04 01:43:28,252 | INFO     | ***  PanDA Pilot version 3.9.1.13  ***
[2024-11-03 20:43:46] 2024-11-04 01:43:28,252 | INFO     | **************************************
[2024-11-03 20:43:46] 2024-11-04 01:43:28,252 | INFO     | 
[2024-11-03 20:43:46] 2024-11-04 01:43:28,258 | INFO     | architecture information:
[2024-11-03 20:43:46] 2024-11-04 01:43:28,258 | INFO     | executing command: cat /etc/os-release
[2024-11-03 20:43:46] 2024-11-04 01:43:28,278 | INFO     | cat /etc/os-release:
[2024-11-03 20:43:46] NAME="CentOS Linux"
[2024-11-03 20:43:46] VERSION="7 (Core)"
[2024-11-03 20:43:46] ID="centos"
[2024-11-03 20:43:46] ID_LIKE="rhel fedora"
[2024-11-03 20:43:46] VERSION_ID="7"
[2024-11-03 20:43:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-11-03 20:43:46] ANSI_COLOR="0;31"
[2024-11-03 20:43:46] CPE_NAME="cpe:/o:centos:centos:7"
[2024-11-03 20:43:46] HOME_URL="https://www.centos.org/"
[2024-11-03 20:43:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-11-03 20:43:46] 
[2024-11-03 20:43:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-11-03 20:43:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-11-03 20:43:46] REDHAT_SUPPORT_PRODUCT="centos"
[2024-11-03 20:43:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-11-03 20:43:46] 
[2024-11-03 20:43:46] 2024-11-04 01:43:28,279 | INFO     | **************************************
[2024-11-03 20:43:46] 2024-11-04 01:43:28,782 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2024-11-03 20:43:46] 2024-11-04 01:43:28,807 | INFO     | sufficient remaining disk space (102253985792 B)
[2024-11-03 20:43:46] 2024-11-04 01:43:28,807 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-11-03 20:43:46] 2024-11-04 01:43:28,808 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-11-03 20:43:46] 2024-11-04 01:43:28,808 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-11-03 20:43:46] 2024-11-04 01:43:28,808 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-11-03 20:43:46] 2024-11-04 01:43:28,808 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-11-03 20:43:46] 2024-11-04 01:43:28,809 | INFO     | aborting loop
[2024-11-03 20:43:46] 2024-11-04 01:43:28,955 | INFO     | all data control threads have been joined
[2024-11-03 20:43:46] 2024-11-04 01:43:29,233 | INFO     | found 0 job(s) in 20 queues
[2024-11-03 20:43:46] 2024-11-04 01:43:29,233 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-11-03 20:43:46] 2024-11-04 01:43:29,233 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-11-03 20:43:46] 2024-11-04 01:43:29,257 | INFO     | all job control threads have been joined
[2024-11-03 20:43:46] 2024-11-04 01:43:29,335 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-11-03 20:43:46] 2024-11-04 01:43:29,813 | INFO     | [job] retrieve thread has finished
[2024-11-03 20:43:46] 2024-11-04 01:43:29,814 | INFO     | [job] queue monitor thread has finished
[2024-11-03 20:43:46] 2024-11-04 01:43:29,815 | INFO     | [job] job monitor thread has finished
[2024-11-03 20:43:46] 2024-11-04 01:43:29,961 | INFO     | [data] control thread has finished
[2024-11-03 20:43:46] 2024-11-04 01:43:30,086 | INFO     | all payload control threads have been joined
[2024-11-03 20:43:46] 2024-11-04 01:43:30,246 | INFO     | [payload] validate_post thread has finished
[2024-11-03 20:43:46] 2024-11-04 01:43:30,262 | INFO     | [job] control thread has finished
[2024-11-03 20:43:46] 2024-11-04 01:43:30,737 | INFO     | [job] validate thread has finished
[2024-11-03 20:43:46] 2024-11-04 01:43:30,957 | INFO     | [payload] execute_payloads thread has finished
[2024-11-03 20:43:46] 2024-11-04 01:43:30,993 | INFO     | [job] create_data_payload thread has finished
[2024-11-03 20:43:46] 2024-11-04 01:43:31,087 | INFO     | [payload] control thread has finished
[2024-11-03 20:43:46] 2024-11-04 01:43:31,152 | INFO     | [payload] validate_pre thread has finished
[2024-11-03 20:43:46] 2024-11-04 01:43:31,234 | INFO     | [payload] failed_post thread has finished
[2024-11-03 20:43:46] 2024-11-04 01:43:31,235 | INFO     | [data] copytool_in thread has finished
[2024-11-03 20:43:46] 2024-11-04 01:43:31,341 | INFO     | [data] copytool_out thread has finished
[2024-11-03 20:43:46] 2024-11-04 01:43:32,811 | INFO     | [data] queue_monitor thread has finished
[2024-11-03 20:43:46] 2024-11-04 01:43:39,263 | INFO     | job.realtimelogging is not enabled
[2024-11-03 20:43:46] 2024-11-04 01:43:40,269 | INFO     | [payload] run_realtimelog thread has finished
[2024-11-03 20:43:46] 2024-11-04 01:43:41,248 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140507419604800)>', '<ExcThread(monitor, started 140507126650624)>']
[2024-11-03 20:43:46] 2024-11-04 01:43:41,294 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-11-03 20:43:46] 2024-11-04 01:43:41,294 | INFO     | [monitor] control thread has ended
[2024-11-03 20:43:46] 2024-11-04 01:43:46,274 | INFO     | all workflow threads have been joined
[2024-11-03 20:43:46] 2024-11-04 01:43:46,274 | INFO     | end of generic workflow (traces error code: 0)
[2024-11-03 20:43:46] 2024-11-04 01:43:46,275 | INFO     | traces error code: 0
[2024-11-03 20:43:46] 2024-11-04 01:43:46,275 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-11-03 20:43:46] 2024-11-04 01:43:46,394 [wrapper] ==== pilot stdout END ====
[2024-11-03 20:43:46] 2024-11-04 01:43:46,397 [wrapper] ==== wrapper stdout RESUME ====
[2024-11-03 20:43:46] 2024-11-04 01:43:46,401 [wrapper] pilotpid: 67044
[2024-11-03 20:43:46] 2024-11-04 01:43:46,404 [wrapper] Pilot exit status: 0
[2024-11-03 20:43:46] 2024-11-04 01:43:46,416 [wrapper] pandaids: 6389081763
[2024-11-03 20:43:46] 2024-11-04 01:43:46,490 [wrapper] cleanup supervisor_pilot 184239 67045
[2024-11-03 20:43:46] 2024-11-04 01:43:46,494 [wrapper] Test setup, not cleaning
[2024-11-03 20:43:46] 2024-11-04 01:43:46,497 [wrapper] ==== wrapper stdout END ====
[2024-11-03 20:43:46] 2024-11-04 01:43:46,501 [wrapper] ==== wrapper stderr END ====
[2024-11-03 20:43:46] 2024-11-04 01:43:46,507 [wrapper] apfmon messages muted
[2024-11-03 20:43:46]  *** Error codes and diagnostics ***
[2024-11-03 20:43:46]     "exeErrorCode": 0,
[2024-11-03 20:43:46]     "exeErrorDiag": "",
[2024-11-03 20:43:46]     "pilotErrorCode": 0,
[2024-11-03 20:43:46]     "pilotErrorDiag": "",
[2024-11-03 20:43:46]  *** Listing of results directory ***
[2024-11-03 20:43:46] total 390612
[2024-11-03 20:43:46] -rw-r--r-- 1 boincer umatlas    486088 Nov  3 19:31 pilot3.tar.gz
[2024-11-03 20:43:46] -rwx------ 1 boincer umatlas     34589 Nov  3 19:33 runpilot2-wrapper.sh
[2024-11-03 20:43:46] -rw-r--r-- 1 boincer umatlas      5652 Nov  3 19:33 queuedata.json
[2024-11-03 20:43:46] -rw-r--r-- 1 boincer umatlas       100 Nov  3 19:53 wrapper_26015_x86_64-pc-linux-gnu
[2024-11-03 20:43:46] -rwxr-xr-x 1 boincer umatlas      7986 Nov  3 19:53 run_atlas
[2024-11-03 20:43:46] -rw-r--r-- 1 boincer umatlas       105 Nov  3 19:53 job.xml
[2024-11-03 20:43:46] -rw-r--r-- 2 boincer umatlas 353225430 Nov  3 19:53 EVNT.41779968._000002.pool.root.1
[2024-11-03 20:43:46] -rw-r--r-- 2 boincer umatlas     17569 Nov  3 19:53 start_atlas.sh
[2024-11-03 20:43:46] drwxrwx--x 2 boincer umatlas      4096 Nov  3 19:53 shared
[2024-11-03 20:43:46] -rw-r--r-- 2 boincer umatlas    499910 Nov  3 19:53 input.tar.gz
[2024-11-03 20:43:46] -rw-r--r-- 1 boincer umatlas         0 Nov  3 19:53 boinc_lockfile
[2024-11-03 20:43:46] -rw-r--r-- 1 boincer umatlas      2847 Nov  3 19:53 pandaJob.out
[2024-11-03 20:43:46] -rw------- 1 boincer umatlas       467 Nov  3 19:53 setup.sh.local
[2024-11-03 20:43:46] -rw------- 1 boincer umatlas   1028995 Nov  3 19:53 agis_schedconf.cvmfs.json
[2024-11-03 20:43:46] -rw------- 1 boincer umatlas   1602446 Nov  3 19:53 agis_ddmendpoints.agis.ALL.json
[2024-11-03 20:43:46] drwx------ 4 boincer umatlas      4096 Nov  3 19:53 pilot3
[2024-11-03 20:43:46] -rw-r--r-- 1 boincer umatlas       528 Nov  3 20:34 boinc_task_state.xml
[2024-11-03 20:43:46] -rw-r--r-- 1 boincer umatlas      6384 Nov  3 20:38 init_data.xml
[2024-11-03 20:43:46] -rw------- 1 boincer umatlas  39917208 Nov  3 20:43 HITS.41843851._005256.pool.root.1
[2024-11-03 20:43:46] -rw------- 1 boincer umatlas      1049 Nov  3 20:43 memory_monitor_summary.json
[2024-11-03 20:43:46] -rw------- 1 boincer umatlas   1176375 Nov  3 20:43 log.41843851._005256.job.log.tgz.1
[2024-11-03 20:43:46] -rw------- 1 boincer umatlas      8565 Nov  3 20:43 heartbeat.json
[2024-11-03 20:43:46] -rw------- 1 boincer umatlas        95 Nov  3 20:43 pilot_heartbeat.json
[2024-11-03 20:43:46] -rw-r--r-- 1 boincer umatlas        26 Nov  3 20:43 wrapper_checkpoint.txt
[2024-11-03 20:43:46] -rw-r--r-- 1 boincer umatlas      8192 Nov  3 20:43 boinc_mmap_file
[2024-11-03 20:43:46] -rw------- 1 boincer umatlas      4288 Nov  3 20:43 pilotlog.txt
[2024-11-03 20:43:46] -rw------- 1 boincer umatlas    313531 Nov  3 20:43 log.41843851._005256.job.log.1
[2024-11-03 20:43:46] -rw------- 1 boincer umatlas       353 Nov  3 20:43 output.list
[2024-11-03 20:43:46] -rw-r--r-- 1 boincer umatlas       620 Nov  3 20:43 runtime_log
[2024-11-03 20:43:46] -rw------- 1 boincer umatlas   1505280 Nov  3 20:43 result.tar.gz
[2024-11-03 20:43:46] -rw-r--r-- 1 boincer umatlas     11428 Nov  3 20:43 runtime_log.err
[2024-11-03 20:43:46] -rw------- 1 boincer umatlas       656 Nov  3 20:43 0JSNDmND0R6n9Rq4apOajLDm4fhM0noT9bVorHsSDmCDvLDmuRTrGo.diag
[2024-11-03 20:43:46] -rw-r--r-- 1 boincer umatlas     21174 Nov  3 20:43 stderr.txt
[2024-11-03 20:43:46] HITS file was successfully produced:
[2024-11-03 20:43:46] -rw------- 1 boincer umatlas 39917208 Nov  3 20:43 shared/HITS.pool.root.1
[2024-11-03 20:43:46]  *** Contents of shared directory: ***
[2024-11-03 20:43:46] total 385920
[2024-11-03 20:43:46] -rw-r--r-- 2 boincer umatlas 353225430 Nov  3 19:53 ATLAS.root_0
[2024-11-03 20:43:46] -rw-r--r-- 2 boincer umatlas     17569 Nov  3 19:53 start_atlas.sh
[2024-11-03 20:43:46] -rw-r--r-- 2 boincer umatlas    499910 Nov  3 19:53 input.tar.gz
[2024-11-03 20:43:46] -rw------- 1 boincer umatlas  39917208 Nov  3 20:43 HITS.pool.root.1
[2024-11-03 20:43:46] -rw------- 1 boincer umatlas   1505280 Nov  3 20:43 result.tar.gz
20:43:48 (62895): run_atlas exited; CPU time 5593.231151
20:43:48 (62895): called boinc_finish(0)

</stderr_txt>
]]>

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